BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00014202
         (4598 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276902.1| DNA-directed RNA polymerase III subunit 1 [A...  2314   0.0  
ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III s...  2084   0.0  
ref|XP_018682186.1| PREDICTED: DNA-directed RNA polymerase III s...  2051   0.0  
ref|XP_020113843.1| DNA-directed RNA polymerase III subunit 1 is...  2014   0.0  
ref|XP_020113844.1| DNA-directed RNA polymerase III subunit 1 is...  2013   0.0  
ref|XP_020113845.1| DNA-directed RNA polymerase III subunit 1 is...  2009   0.0  
gb|OAY83936.1| DNA-directed RNA polymerase III subunit 1 [Ananas...  1959   0.0  
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...  1956   0.0  
ref|XP_015636431.1| PREDICTED: DNA-directed RNA polymerase III s...  1954   0.0  
ref|XP_020687153.1| DNA-directed RNA polymerase III subunit 1 is...  1918   0.0  
ref|XP_002446717.1| DNA-directed RNA polymerase III subunit 1 [S...  1914   0.0  
ref|XP_008669237.1| DNA-directed RNA polymerase III subunit 1 [Z...  1903   0.0  
gb|PKU65969.1| DNA-directed RNA polymerase II subunit RPB1 [Dend...  1896   0.0  
ref|XP_004976057.1| DNA-directed RNA polymerase III subunit 1 [S...  1893   0.0  
gb|ONM16376.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]  1890   0.0  
gb|ONM16381.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]  1890   0.0  
gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria ital...  1889   0.0  
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...  1889   0.0  
gb|PAN38835.1| hypothetical protein PAHAL_G00721 [Panicum hallii]    1887   0.0  
ref|XP_020575429.1| DNA-directed RNA polymerase III subunit 1 is...  1884   0.0  

>ref|XP_020276902.1| DNA-directed RNA polymerase III subunit 1 [Asparagus officinalis]
 gb|ONK61062.1| uncharacterized protein A4U43_C08F25870 [Asparagus officinalis]
          Length = 1381

 Score = 2314 bits (5997), Expect = 0.0
 Identities = 1171/1390 (84%), Positives = 1249/1390 (89%), Gaps = 14/1390 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            M+  AEKLRCTKEPYIED+GPR+IKSI FDAFSG++++K AEVQVW++ LYD +A KPV 
Sbjct: 1    MSRRAEKLRCTKEPYIEDVGPRRIKSICFDAFSGDEVKKAAEVQVWSDRLYDLSA-KPVE 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RMGP NKK VC TC+GGF DCPGHFGYL+LTLPVFNVGYFNSILNILKCICK C
Sbjct: 60   NGLVDPRMGPPNKKVVCATCNGGFADCPGHFGYLKLTLPVFNVGYFNSILNILKCICKGC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPR----CGHINGNVSK 622
            GRILL + ER+EFL K RNP+ADVHQKN IMK VR+KCKS  + PR    CGH NG ++K
Sbjct: 120  GRILLEDAERREFLMKVRNPKADVHQKNMIMKKVRDKCKSTLQSPRSCASCGHKNGVLAK 179

Query: 623  AKS-QLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCE 799
             KS QL++ E     VD+SLE   AALSHLKEK S+Q +H LTP  V  LFKKMPDEDCE
Sbjct: 180  GKSFQLSIIEKLEV-VDKSLE---AALSHLKEKPSYQHLHFLTPFDVFCLFKKMPDEDCE 235

Query: 800  LLHLGVRPENLIVTEIAIPPAPIRPSVIVGSGQSNEDGLTAXXXXXXXXXXXXXEDLDGA 979
            LL+L VRPENLIVTE+AIPPAPIRPSVIV SGQSNEDGLTA             E ++GA
Sbjct: 236  LLNLCVRPENLIVTEVAIPPAPIRPSVIVNSGQSNEDGLTAILKEVIQRNSRLREGIEGA 295

Query: 980  A-PLYNCLE-CWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEF 1153
            + P++NC++  W+ LQ  VV+YINSEAPSV ESKHRGL+QRLKGKQGRFRCNLSGKRVEF
Sbjct: 296  SVPMHNCMDRWWSELQDVVVKYINSEAPSVIESKHRGLIQRLKGKQGRFRCNLSGKRVEF 355

Query: 1154 TGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVIL 1333
            TGRTVISPDPNLKITEVAIPILMA+VLTYPERVT HNIEKLRQCVRNGPFKHPGANFV L
Sbjct: 356  TGRTVISPDPNLKITEVAIPILMARVLTYPERVTQHNIEKLRQCVRNGPFKHPGANFVTL 415

Query: 1334 PDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 1513
            PDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR
Sbjct: 416  PDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 475

Query: 1514 TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQD 1693
            TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAF LMGVQNNLCTPKNGEILVASTQD
Sbjct: 476  TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFTLMGVQNNLCTPKNGEILVASTQD 535

Query: 1694 FLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRP 1873
            FLTSSFLITRKDTFYDRAAFSLMCSYIGDGME IDLP PALIKPIELWTGKQLFSV+VRP
Sbjct: 536  FLTSSFLITRKDTFYDRAAFSLMCSYIGDGMEVIDLPPPALIKPIELWTGKQLFSVIVRP 595

Query: 1874 NAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVL 2053
            NAQTRVFVN +VKERIHVKDTETMCP DGYVYFRNS+LICGQLGKVTLGNGNK+GLFSVL
Sbjct: 596  NAQTRVFVNFVVKERIHVKDTETMCPHDGYVYFRNSDLICGQLGKVTLGNGNKNGLFSVL 655

Query: 2054 LRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSF 2233
            LRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGY RC SF
Sbjct: 656  LRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYGRCISF 715

Query: 2234 IDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKG 2413
            I+LYENRKL L+PGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKG
Sbjct: 716  IELYENRKLKLRPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKG 775

Query: 2414 SAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEF 2593
            SAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSK PAAKGFVANSFYTGLTATEF
Sbjct: 776  SAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKTPAAKGFVANSFYTGLTATEF 835

Query: 2594 FFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGM 2773
            FFHTMGGREGLVDTAVKTAETGYMSRRLMK+LEDLSLYYDQTVRS++GG+VQFIYGDDGM
Sbjct: 836  FFHTMGGREGLVDTAVKTAETGYMSRRLMKSLEDLSLYYDQTVRSSNGGVVQFIYGDDGM 895

Query: 2774 DPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSS 2953
            DPAKMEGENG PLNLDQLYKKV+ATCP +PQDSLSPS+I+ L+NERLSKYDM+PE GCSS
Sbjct: 896  DPAKMEGENGTPLNLDQLYKKVMATCPCRPQDSLSPSEIICLINERLSKYDMTPEGGCSS 955

Query: 2954 AFKNLLSDFLHKRVAELRKTRTRLKLQEDGQKEDSGTLENVAANISGISAKQLQVFMETC 3133
            AFKNLL DFLHK VAELRKTR RL+LQED  KE S  LENVAANISGISA+QL+VFMETC
Sbjct: 956  AFKNLLLDFLHKHVAELRKTRIRLQLQED-HKETSSVLENVAANISGISAQQLKVFMETC 1014

Query: 3134 ISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK 3313
            ISRYHKKKLE              EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK
Sbjct: 1015 ISRYHKKKLEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK 1074

Query: 3314 NISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERLK 3493
            NISTPIITATLFCDD+EESARLVK EIE+T+LGEVAEAVK V KSN PYISI+ DKER+K
Sbjct: 1075 NISTPIITATLFCDDKEESARLVKSEIERTLLGEVAEAVKTVLKSNHPYISIVLDKERIK 1134

Query: 3494 TLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFP-------PVSDRNRLHF 3652
            TLHMEDS +SIKN+I +H++   +KLK E IT  G GNLRIFP          D +RL+ 
Sbjct: 1135 TLHMEDSLDSIKNSIVNHRN---LKLKAEDITFHGKGNLRIFPRGRNAKGDNKDGSRLNS 1191

Query: 3653 ELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHV 3832
            EL+SL S+LPKVIVKGISTVDRAVINCQ+ KYNLLVEGTNLLAVMGTPGVDASKTKSNH+
Sbjct: 1192 ELHSLTSILPKVIVKGISTVDRAVINCQRGKYNLLVEGTNLLAVMGTPGVDASKTKSNHI 1251

Query: 3833 MEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKM 4012
            MEIWQTLGIEAAR  IISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKM
Sbjct: 1252 MEIWQTLGIEAARQSIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKM 1311

Query: 4013 KDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPE 4192
            KDS+LMLASFEKTSEHLFNASFN RDDQIEGVSECIIMGIPMQLGTGILKVRQR+EQLPE
Sbjct: 1312 KDSVLMLASFEKTSEHLFNASFNHRDDQIEGVSECIIMGIPMQLGTGILKVRQRVEQLPE 1371

Query: 4193 FKYGPDPIIC 4222
             KYGP P+IC
Sbjct: 1372 LKYGPGPVIC 1381


>ref|XP_010907843.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Elaeis
            guineensis]
          Length = 1369

 Score = 2084 bits (5399), Expect = 0.0
 Identities = 1038/1373 (75%), Positives = 1180/1373 (85%), Gaps = 2/1373 (0%)
 Frame = +2

Query: 110  EKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVAHGLID 289
            EKLRCTKEPYIED+GPRKIKSIRF  FSGE+IRK+AEVQVWNN +YD   +KP+ +GL+D
Sbjct: 3    EKLRCTKEPYIEDVGPRKIKSIRFSTFSGEEIRKLAEVQVWNNRIYDLN-LKPIENGLLD 61

Query: 290  SRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKACGRILL 469
             RMG  N++T C TCHG FTDCPGHFGYL+LTLPVFNVGYFNSILNILKCICK CGRILL
Sbjct: 62   PRMGAPNRQTECATCHGNFTDCPGHFGYLKLTLPVFNVGYFNSILNILKCICKGCGRILL 121

Query: 470  PEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQLAVAE 649
             E  RK +L K RNP+AD+ QKN +MK VR+KCK  SRC RCG+ NG V KA+S L   +
Sbjct: 122  DETLRKSYLKKMRNPKADIFQKNALMKMVRDKCKP-SRCLRCGYANGVVKKARSGLYFIQ 180

Query: 650  NFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLGVRPEN 829
            +F  T D S+EE R+ALSH K+K SFQ  H+L+   VL+LF+KM DEDCELL+L  RPE 
Sbjct: 181  DFSKTADPSVEEFRSALSHTKDKTSFQVSHVLSAVAVLSLFRKMLDEDCELLNLYDRPEK 240

Query: 830  LIVTEIAIPPAPIRPSVIVGSGQS-NEDGLTAXXXXXXXXXXXXXEDLDGAAPLYNCLEC 1006
            LIVT IA+PP  IRPSVIV SG+S NED +T+             EDL+GAAP + CL+C
Sbjct: 241  LIVTHIAVPPVSIRPSVIVDSGRSSNEDNITSILKNIINTNSILREDLEGAAPPFKCLDC 300

Query: 1007 WNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVISPDPN 1186
            W  LQ  VVEYINSEAP +P+SKHRGLVQRLKGKQGRFR NLSGKRVEFTGRTVISPDPN
Sbjct: 301  WTHLQIQVVEYINSEAPCIPDSKHRGLVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPN 360

Query: 1187 LKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLHLKYV 1366
            LKITEVAIPILMA+VLTYPERV+++NIEKLRQ VRNGP K+PGANFV+ PDG+++HL+YV
Sbjct: 361  LKITEVAIPILMARVLTYPERVSNYNIEKLRQLVRNGPSKYPGANFVLRPDGSKVHLRYV 420

Query: 1367 EKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNP 1546
            +K+++ANELKYG VVERHLEDGDIVLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNP
Sbjct: 421  DKRDIANELKYGYVVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNP 480

Query: 1547 YNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK 1726
            YNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK
Sbjct: 481  YNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK 540

Query: 1727 DTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVFVNLI 1906
            DTFYDRAAFSLMCSY+GD M+ IDLPTPA+IKPIELWTGKQLF+VL+RPNA TRVF+NLI
Sbjct: 541  DTFYDRAAFSLMCSYMGDAMDPIDLPTPAIIKPIELWTGKQLFNVLIRPNANTRVFLNLI 600

Query: 1907 VKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNSDVAAS 2086
            VKE+I+ K +ETMCP DG VYFRNSELICGQLGK TLGNGNK GLF+VLLRDYN   AAS
Sbjct: 601  VKEKIYSK-SETMCPNDGCVYFRNSELICGQLGKATLGNGNKDGLFAVLLRDYNPHAAAS 659

Query: 2087 CMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYENRKLTL 2266
            CMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQK+  I++GYR C   I  Y   +L L
Sbjct: 660  CMNRLAKLSARWIGNHGFSIGIDDVQPGENLNQQKRKKINEGYRECHGHISSYSKGELIL 719

Query: 2267 KPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINISQMIAC 2446
            +PG NAA+TLE++IT VLN+IR TAG+VCM ELHWRNSPLIMSQCGSKGS INISQM+AC
Sbjct: 720  QPGCNAAQTLELKITGVLNQIRATAGNVCMNELHWRNSPLIMSQCGSKGSPINISQMVAC 779

Query: 2447 VGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMGGREGL 2626
            VGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLT TEFFFHTMGGREGL
Sbjct: 780  VGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTPTEFFFHTMGGREGL 839

Query: 2627 VDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGI 2806
            VDTAVKTAETGYMSRRLMK LEDLS+YYDQTVR+ASG IVQF+YGDDGMDPAKMEG++GI
Sbjct: 840  VDTAVKTAETGYMSRRLMKGLEDLSIYYDQTVRTASGSIVQFVYGDDGMDPAKMEGKDGI 899

Query: 2807 PLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLH 2986
            PLNLDQL+ K++ATCP + QD+LSP++I+ ++++RLSKYDM+PE GCS++FK +LSDFLH
Sbjct: 900  PLNLDQLFMKIMATCPLREQDTLSPAEILHIMDDRLSKYDMTPEGGCSASFKKMLSDFLH 959

Query: 2987 KRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGISAKQLQVFMETCISRYHKKKLE 3163
            KRVA L   R  L+L E+  QK+D   LE+VAANISGISAKQLQVF+ETCISRYH KK+E
Sbjct: 960  KRVAALCNIRRALQLDENHLQKQDYSVLESVAANISGISAKQLQVFLETCISRYHLKKIE 1019

Query: 3164 XXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAT 3343
                          EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAT
Sbjct: 1020 AGGAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAT 1079

Query: 3344 LFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERLKTLHMEDSFES 3523
            L  D    SAR+V+  ++KTVLGEVA+A+KIV KS+QPYI +  D ER++ LHM  S +S
Sbjct: 1080 LVSDRDVLSARMVRSSLQKTVLGEVAKAIKIVLKSSQPYIVVKLDMERIEALHMRISSQS 1139

Query: 3524 IKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGI 3703
            ++ AI +H    K KLK EHI + G   L+I+PP +DR++L FEL+SLK++LPKVIVKGI
Sbjct: 1140 VQQAILNH---PKTKLKPEHIRVLGNNKLKIYPPEADRSKLQFELHSLKAVLPKVIVKGI 1196

Query: 3704 STVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCII 3883
            +TV+RAVIN     YNLLVEGTNLLAVMGTPG+D SKTKSNH++E+ QT+GIEAAR CII
Sbjct: 1197 ATVERAVINHANGVYNLLVEGTNLLAVMGTPGIDGSKTKSNHIIEVQQTIGIEAARQCII 1256

Query: 3884 SEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHL 4063
            +EIQ TM++HGMSIDARHMMLLAD+MTY+GEVLGITRFG++KMKDS+LMLASFEKT+EHL
Sbjct: 1257 NEIQYTMRNHGMSIDARHMMLLADLMTYRGEVLGITRFGISKMKDSVLMLASFEKTAEHL 1316

Query: 4064 FNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPIIC 4222
            FNAS++GR+DQIEGVSECIIMGIPMQLGTGILKVRQR+EQLPE KY PDPIIC
Sbjct: 1317 FNASYSGRNDQIEGVSECIIMGIPMQLGTGILKVRQRVEQLPELKYRPDPIIC 1369


>ref|XP_018682186.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Musa acuminata
            subsp. malaccensis]
 ref|XP_018682187.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Musa acuminata
            subsp. malaccensis]
          Length = 1372

 Score = 2051 bits (5314), Expect = 0.0
 Identities = 1024/1372 (74%), Positives = 1169/1372 (85%), Gaps = 2/1372 (0%)
 Frame = +2

Query: 110  EKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVAHGLID 289
            EKLRCTKEPYIED+GP++IKSIRF  FSGE+I+K+AEVQVWNN +Y    ++PV +GL+D
Sbjct: 6    EKLRCTKEPYIEDVGPQRIKSIRFSTFSGEEIKKLAEVQVWNNRIYGID-LRPVENGLLD 64

Query: 290  SRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKACGRILL 469
             +MG ANK  VC TCHG FT+CPGHFGYL+LTLPVFNVG+FNSILN+LKCICKAC RILL
Sbjct: 65   PKMGAANKAGVCATCHGNFTECPGHFGYLKLTLPVFNVGFFNSILNVLKCICKACARILL 124

Query: 470  PEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQLAVAE 649
             E +R+ FL K RNP+AD+  KN +MK +R+KCK  S CP CG  NG V KA+S  A+A 
Sbjct: 125  LENDRRIFLKKMRNPKADIFMKNALMKKIRDKCK-ISICPWCGSRNGVVKKARSSFAIAH 183

Query: 650  NFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLGVRPEN 829
            +F  +VDES+E  RAALSH+K K SFQ VH+L+P  VL+LFK+M DEDCELL+L  RP+ 
Sbjct: 184  DFSRSVDESIEVVRAALSHIKAKSSFQIVHVLSPVTVLSLFKRMVDEDCELLNLYDRPDK 243

Query: 830  LIVTEIAIPPAPIRPSVIVGSGQS-NEDGLTAXXXXXXXXXXXXXEDLDGAAPLYNCLEC 1006
            LIVT IA+PP  +RPSV V  G+S NED +T              EDL+GAAP + CL+C
Sbjct: 244  LIVTTIAVPPVAVRPSVFVDFGKSSNEDSITTILKNIINTNSILREDLEGAAPPFKCLDC 303

Query: 1007 WNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVISPDPN 1186
            W  LQ  VVEYINSEAPSVP+SKHRGL+QRLKGKQGRFR NLSGKRVEFTGRTVISPDPN
Sbjct: 304  WAHLQIQVVEYINSEAPSVPDSKHRGLIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPN 363

Query: 1187 LKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLHLKYV 1366
            LKITEVAIP+LMA+ LTYPERV+ +NIEKLRQ + NGP K+PGANF++L DGT+ HL+YV
Sbjct: 364  LKITEVAIPVLMAKKLTYPERVSAYNIEKLRQRICNGPDKYPGANFILLGDGTKQHLRYV 423

Query: 1367 EKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNP 1546
            +KK  A+ELKYG +VERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNP
Sbjct: 424  DKKTAASELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNP 483

Query: 1547 YNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK 1726
            YNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK
Sbjct: 484  YNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRK 543

Query: 1727 DTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVFVNLI 1906
            DTFYDRAAFSLMCSY+GD M+ IDLP+PA+IKPIELWTGKQLFSVL+RPNA+T+VF+NL+
Sbjct: 544  DTFYDRAAFSLMCSYMGDSMDPIDLPSPAIIKPIELWTGKQLFSVLIRPNARTKVFLNLM 603

Query: 1907 VKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNSDVAAS 2086
            VKE+I+ K +ETMCP DGYVYFRNSELICGQLGKVTLGNGNK GLFSVLLRDYNS  AAS
Sbjct: 604  VKEKIYTK-SETMCPSDGYVYFRNSELICGQLGKVTLGNGNKDGLFSVLLRDYNSHAAAS 662

Query: 2087 CMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYENRKLTL 2266
            CMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C   I LY   KLTL
Sbjct: 663  CMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNQQKKKKIDEGYRECHELISLYGKGKLTL 722

Query: 2267 KPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINISQMIAC 2446
            +PG NAA+TLE++IT VLN+IR  AG+VCM ELHWRNSPLIMSQCGSKGS INISQM++C
Sbjct: 723  QPGCNAAQTLELKITGVLNQIRAIAGNVCMNELHWRNSPLIMSQCGSKGSPINISQMVSC 782

Query: 2447 VGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMGGREGL 2626
            VGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEFFFHTMGGREGL
Sbjct: 783  VGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGL 842

Query: 2627 VDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKMEGENGI 2806
            VDTAVKTAETGYMSRRLMK LEDLS+YYD+TVR+ASGGIVQF+YGDDGMDPAKMEG++GI
Sbjct: 843  VDTAVKTAETGYMSRRLMKGLEDLSIYYDETVRNASGGIVQFLYGDDGMDPAKMEGKDGI 902

Query: 2807 PLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLLSDFLH 2986
            PLN+DQL+ KV+ATCP +  D LSP++ + ++++RL+KYDMSPE GCS+AFK LLSDF+H
Sbjct: 903  PLNMDQLFMKVMATCPPREHDMLSPTEALRIMDDRLAKYDMSPEGGCSAAFKKLLSDFVH 962

Query: 2987 KRVAELRKTRTRLKLQE-DGQKEDSGTLENVAANISGISAKQLQVFMETCISRYHKKKLE 3163
            KRV+ L   R  LKL E D  ++DS  LENVAA ISGIS+KQL+VF+ETCISRYH KK+E
Sbjct: 963  KRVSALANMRKSLKLDETDMGRKDSTVLENVAAKISGISSKQLEVFLETCISRYHSKKVE 1022

Query: 3164 XXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITAT 3343
                          EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA+KNISTPI+TAT
Sbjct: 1023 AGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKNISTPIVTAT 1082

Query: 3344 LFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERLKTLHMEDSFES 3523
            L       SAR+VK  IEKTVLGEVA+A+KIV KS++PYI +  D + ++ LHM  S ES
Sbjct: 1083 LLNGRDVLSARVVKSCIEKTVLGEVAKALKIVLKSSRPYIVVKLDMDLIEALHMRVSAES 1142

Query: 3524 IKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKVIVKGI 3703
            + ++I +H    KIKLK EHI   G   L+I+PP +DR +L FE++SLK+MLPKVIVKGI
Sbjct: 1143 VCHSILNH---PKIKLKSEHINNIGSDKLKIYPPEADRRKLQFEMHSLKAMLPKVIVKGI 1199

Query: 3704 STVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEAARHCII 3883
             TV+RAVIN     YNLLVEGTNLLAVMGTPG+DASKT+SNHV+E+ +TLGIEAAR CII
Sbjct: 1200 PTVERAVINETNGVYNLLVEGTNLLAVMGTPGIDASKTRSNHVIEVQRTLGIEAARQCII 1259

Query: 3884 SEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFEKTSEHL 4063
            +EIQ TM+ HGMSID RHMMLLAD+MTYKGEVLGITRFG++KMK+S+LMLASFEKT+EHL
Sbjct: 1260 NEIQYTMRGHGMSIDTRHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHL 1319

Query: 4064 FNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 4219
            FNAS+ GRDDQIEGVSECIIMGIPMQLGTGILKVRQR+E+LPE KY PDPII
Sbjct: 1320 FNASYGGRDDQIEGVSECIIMGIPMQLGTGILKVRQRVEKLPELKYAPDPII 1371


>ref|XP_020113843.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Ananas comosus]
          Length = 1377

 Score = 2014 bits (5218), Expect = 0.0
 Identities = 1010/1378 (73%), Positives = 1157/1378 (83%), Gaps = 3/1378 (0%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEPYIED+G RKIKSIRF   S E+IRK AEVQVWNN +Y    ++PV 
Sbjct: 1    MAPVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIY-GNDLQPVE 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RMG ANKK  C TCHG FT+CPGHFGYL+LTLPVFNVGYF+SIL+ILKCICK C
Sbjct: 60   NGLLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             RILLPE++R+EFL K RNP+AD  QKN ++K +R+KCK F RCPRCG  NG V KA++ 
Sbjct: 120  SRILLPEEDRREFLRKMRNPKADALQKNALLKKIRDKCKMF-RCPRCGSSNGVVKKARTG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    ALFK+M DEDCE+L+L 
Sbjct: 179  LAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFALFKRMLDEDCEVLNLY 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIVTEIA+PPA IRPS  VG G+ SNED +T+             EDL+G AP  
Sbjct: 239  DRPEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEGGAPAS 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR NLSGKRVE+TGRTVI
Sbjct: 299  KCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFRGNLSGKRVEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP K+PGANFV  PDG+ +
Sbjct: 359  SPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQKPDGSTM 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
            HLKYV KK VAN+LKYG +VERHLEDGDIVLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  HLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            LITRKDTFYDRA FSLMCSY+GD M+SIDLPTPALIKP+ELWTGKQLFSVLVRPNA TRV
Sbjct: 539  LITRKDTFYDRATFSLMCSYMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVRPNACTRV 598

Query: 1892 FVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNS 2071
            F+NLIVKE+I+  D ETMCP DGYVYFRNSELI GQLGKVTLGNGNK GLFSVLLRDYNS
Sbjct: 599  FLNLIVKEKIYT-DNETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYNS 657

Query: 2072 DVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYEN 2251
              AASCMNR+AKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C   I  Y  
Sbjct: 658  HAAASCMNRVAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKIDEGYRECHEHISSYSK 717

Query: 2252 RKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINIS 2431
             +LT +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSPLIMSQCGSKGSAINIS
Sbjct: 718  GQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSKGSAINIS 777

Query: 2432 QMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMG 2611
            QM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEFFFHTMG
Sbjct: 778  QMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMG 837

Query: 2612 GREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKME 2791
            GREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GIVQF+YGDDGMDPAKME
Sbjct: 838  GREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDGMDPAKME 897

Query: 2792 GENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLL 2971
            G++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+DMSPE GCS+AFK LL
Sbjct: 898  GKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKHDMSPEGGCSAAFKKLL 957

Query: 2972 SDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISRYH 3148
            +DF++ RV  +R TR  LKL ED  +++D    E +AANISGIS+KQLQVF++ CISRYH
Sbjct: 958  TDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLDNCISRYH 1017

Query: 3149 KKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTP 3328
             KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINAAKNI TP
Sbjct: 1018 FKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAAKNIKTP 1077

Query: 3329 IITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERLKTLHME 3508
            IITA L  D    SA +VKG IEKTVLGEVA+A++IV KS++PYIS+  D   +K LHM 
Sbjct: 1078 IITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGLIKALHMR 1137

Query: 3509 DSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKV 3688
             S +S++ +I +H    KIKLK EHI I     LRI+ P +D+++L F L+SLK+MLPKV
Sbjct: 1138 ISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSLKAMLPKV 1194

Query: 3689 IVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEA 3865
            IVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  TK NHV+E+ +TLG+EA
Sbjct: 1195 IVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVHETLGVEA 1254

Query: 3866 ARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFE 4045
            AR  II EI DTM++HGMSID RHMMLLADVMTYKGEVLGITRFG+ KMK S+LMLASFE
Sbjct: 1255 ARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRFGIAKMKTSVLMLASFE 1314

Query: 4046 KTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 4219
            KT+EHLFNAS++GR+D+I+GVSECIIMGIPM+LGTGILKV+QR+EQ+P+FKY P P++
Sbjct: 1315 KTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRLEQIPDFKYVPGPVL 1372


>ref|XP_020113844.1| DNA-directed RNA polymerase III subunit 1 isoform X2 [Ananas comosus]
          Length = 1377

 Score = 2013 bits (5214), Expect = 0.0
 Identities = 1009/1378 (73%), Positives = 1157/1378 (83%), Gaps = 3/1378 (0%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEPYIED+G RKIKSIRF   S E+IRK AEVQVWNN +Y    ++PV 
Sbjct: 1    MAPVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIY-GNDLQPVE 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RMG ANKK  C TCHG FT+CPGHFGYL+LTLPVFNVGYF+SIL+ILKCICK C
Sbjct: 60   NGLLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             RILLPE++R+EFL K RNP+AD  QKN ++K +R+KCK F RCPRCG  NG V KA++ 
Sbjct: 120  SRILLPEEDRREFLRKMRNPKADALQKNALLKKIRDKCKMF-RCPRCGSSNGVVKKARTG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    ALFK+M DEDCE+L+L 
Sbjct: 179  LAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFALFKRMLDEDCEVLNLY 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIVTEIA+PPA IRPS  VG G+ SNED +T+             EDL+G AP  
Sbjct: 239  DRPEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEGGAPAS 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR NLSGKRVE+TGRTVI
Sbjct: 299  KCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFRGNLSGKRVEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP K+PGANFV  PDG+ +
Sbjct: 359  SPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQKPDGSTM 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
            HLKYV KK VAN+LKYG +VERHLEDGDIVLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  HLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            LITRKDTFYDRA FSLMCS++GD M+SIDLPTPALIKP+ELWTGKQLFSVLVRPNA TRV
Sbjct: 539  LITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVRPNACTRV 598

Query: 1892 FVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNS 2071
            F+NLIVKE+I+  D ETMCP DGYVYFRNSELI GQLGKVTLGNGNK GLFSVLLRDYNS
Sbjct: 599  FLNLIVKEKIYT-DNETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYNS 657

Query: 2072 DVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYEN 2251
              AASCMNR+AKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C   I  Y  
Sbjct: 658  HAAASCMNRVAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKIDEGYRECHEHISSYSK 717

Query: 2252 RKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINIS 2431
             +LT +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSPLIMSQCGSKGSAINIS
Sbjct: 718  GQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSKGSAINIS 777

Query: 2432 QMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMG 2611
            QM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEFFFHTMG
Sbjct: 778  QMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMG 837

Query: 2612 GREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKME 2791
            GREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GIVQF+YGDDGMDPAKME
Sbjct: 838  GREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDGMDPAKME 897

Query: 2792 GENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLL 2971
            G++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+DMSPE GCS+AFK LL
Sbjct: 898  GKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKHDMSPEGGCSAAFKKLL 957

Query: 2972 SDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISRYH 3148
            +DF++ RV  +R TR  LKL ED  +++D    E +AANISGIS+KQLQVF++ CISRYH
Sbjct: 958  TDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLDNCISRYH 1017

Query: 3149 KKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTP 3328
             KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINAAKNI TP
Sbjct: 1018 FKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAAKNIKTP 1077

Query: 3329 IITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERLKTLHME 3508
            IITA L  D    SA +VKG IEKTVLGEVA+A++IV KS++PYIS+  D   +K LHM 
Sbjct: 1078 IITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGLIKALHMR 1137

Query: 3509 DSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKV 3688
             S +S++ +I +H    KIKLK EHI I     LRI+ P +D+++L F L+SLK+MLPKV
Sbjct: 1138 ISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSLKAMLPKV 1194

Query: 3689 IVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEA 3865
            IVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  TK NHV+E+ +TLG+EA
Sbjct: 1195 IVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVHETLGVEA 1254

Query: 3866 ARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFE 4045
            AR  II EI DTM++HGMSID RHMMLLADVMTYKGEVLGITRFG+ KMK S+LMLASFE
Sbjct: 1255 ARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRFGIAKMKTSVLMLASFE 1314

Query: 4046 KTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 4219
            KT+EHLFNAS++GR+D+I+GVSECIIMGIPM+LGTGILKV+QR+EQ+P+FKY P P++
Sbjct: 1315 KTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRLEQIPDFKYVPGPVL 1372


>ref|XP_020113845.1| DNA-directed RNA polymerase III subunit 1 isoform X3 [Ananas comosus]
          Length = 1377

 Score = 2009 bits (5206), Expect = 0.0
 Identities = 1008/1378 (73%), Positives = 1156/1378 (83%), Gaps = 3/1378 (0%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEPYIED+G RKIKSIRF   S E+IRK AEVQVWNN +Y    ++PV 
Sbjct: 1    MAPVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIY-GNDLQPVE 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RMG ANKK  C TCHG FT+CPGHFGYL+LTLPVFNVGYF+SIL+ILKCICK C
Sbjct: 60   NGLLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             RILLPE++R+EFL K RNP+AD  QKN ++K +R+KCK F RCPRCG  NG V KA++ 
Sbjct: 120  SRILLPEEDRREFLRKMRNPKADALQKNALLKKIRDKCKMF-RCPRCGSSNGVVKKARTG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    ALFK+M DEDCE+L+L 
Sbjct: 179  LAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFALFKRMLDEDCEVLNLY 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIVTEIA+PPA IRPS  VG G+ SNED +T+             EDL+G AP  
Sbjct: 239  DRPEKLIVTEIAVPPATIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDLEGGAPAS 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR NLSGKRVE+TGRTVI
Sbjct: 299  KCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFRGNLSGKRVEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP K+PGANFV  PDG+ +
Sbjct: 359  SPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQKPDGSTM 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
            HLKYV KK VAN+LKYG +VERHLEDGDIVLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  HLKYVNKKIVANDLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            LITRKDTFYDRA FSLMCS++GD M+SIDLPTPALIKP+ELWTGKQLFSVLVRPNA TRV
Sbjct: 539  LITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVRPNACTRV 598

Query: 1892 FVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNS 2071
            F+NL VKE+I+  + ETMCP DGYVYFRNSELI GQLGKVTLGNGNK GLFSVLLRDYNS
Sbjct: 599  FLNLTVKEKIYTAN-ETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSVLLRDYNS 657

Query: 2072 DVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYEN 2251
              AASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C   I  Y  
Sbjct: 658  HAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKKKIDEGYRECHEHISSYSK 717

Query: 2252 RKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINIS 2431
             +LT +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSPLIMSQCGSKGSAINIS
Sbjct: 718  GQLTCEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSKGSAINIS 777

Query: 2432 QMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHTMG 2611
            QM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEFFFHTMG
Sbjct: 778  QMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFFHTMG 837

Query: 2612 GREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAKME 2791
            GREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GIVQF+YGDDGMDPAKME
Sbjct: 838  GREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDGMDPAKME 897

Query: 2792 GENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKNLL 2971
            G++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+DMSPE GCS+AFK LL
Sbjct: 898  GKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKHDMSPEGGCSAAFKKLL 957

Query: 2972 SDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISRYH 3148
            +DF++ RV  +R TR  LKL ED  +++D    E +AANISGIS+KQLQVF++ CISRYH
Sbjct: 958  TDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLDNCISRYH 1017

Query: 3149 KKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTP 3328
             KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINAAKNI TP
Sbjct: 1018 FKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINAAKNIKTP 1077

Query: 3329 IITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERLKTLHME 3508
            IITA L  D    SA +VKG IEKTVLGEVA+A++IV KS++PYIS+  D   +K LHM 
Sbjct: 1078 IITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGLIKALHMR 1137

Query: 3509 DSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLPKV 3688
             S +S++ +I +H    KIKLK EHI I     LRI+ P +D+++L F L+SLK+MLPKV
Sbjct: 1138 ISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSLKAMLPKV 1194

Query: 3689 IVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIEA 3865
            IVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  TK NHV+E+ +TLG+EA
Sbjct: 1195 IVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVHETLGVEA 1254

Query: 3866 ARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASFE 4045
            AR  II EI DTM++HGMSID RHMMLLADVMTYKGEVLGITRFG+ KMK S+LMLASFE
Sbjct: 1255 ARQSIIDEIHDTMRNHGMSIDKRHMMLLADVMTYKGEVLGITRFGIAKMKTSVLMLASFE 1314

Query: 4046 KTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 4219
            KT+EHLFNAS++GR+D+I+GVSECIIMGIPM+LGTGILKV+QR+EQ+P+FKY P P++
Sbjct: 1315 KTAEHLFNASYSGREDKIDGVSECIIMGIPMRLGTGILKVKQRLEQIPDFKYVPGPVL 1372


>gb|OAY83936.1| DNA-directed RNA polymerase III subunit 1 [Ananas comosus]
          Length = 1412

 Score = 1959 bits (5075), Expect = 0.0
 Identities = 999/1426 (70%), Positives = 1150/1426 (80%), Gaps = 16/1426 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEPYIED+G RKIKSIRF   S E+IRK AEVQVWNN +Y    ++PV 
Sbjct: 1    MAPVEEKLRCTKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIY-GNDLQPVE 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RMG ANKK  C TCHG FT+CPGHFGYL+LTLPVFNVGYF+ IL+ILKCICK C
Sbjct: 60   NGLLDRRMGSANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSFILDILKCICKTC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHIN-------GN 613
             RILLPE++R+EFL K RNPR D  QKN +MK +R+KCK F RCPRCG  N       G 
Sbjct: 120  SRILLPEEDRREFLRKMRNPRTDALQKNALMKKIRDKCKMF-RCPRCGSSNVYIIGNTGV 178

Query: 614  VSKAKSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDED 793
            V KA++ LA+A++F  +VDES EE R+ALSH K+K SFQ  H++TP    ALFK+M DED
Sbjct: 179  VKKARTGLAIAQHFTKSVDESAEEIRSALSHKKDKQSFQAAHVITPGAAFALFKRMLDED 238

Query: 794  CELLHLGVRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDL 970
            CELL L  RPE LIVTEIA+PPAPIRPS  VG G+ SNED +T+             EDL
Sbjct: 239  CELLDLYDRPEKLIVTEIAVPPAPIRPSGFVGFGRTSNEDSITSILKNIINTNSILREDL 298

Query: 971  DGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVE 1150
            +G AP   C++CW  LQ  VVEYINS++PSVPESKHRGL+QRLKGKQGRFR NLSGKRVE
Sbjct: 299  EGGAPASKCIDCWTHLQIQVVEYINSDSPSVPESKHRGLIQRLKGKQGRFRGNLSGKRVE 358

Query: 1151 FTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVI 1330
            +TGRTVISPDPNLKITEVAIP+LMA VLTYPERV+++NIEKLRQC+ NGP K+PGANFV 
Sbjct: 359  YTGRTVISPDPNLKITEVAIPVLMALVLTYPERVSYYNIEKLRQCILNGPDKYPGANFVQ 418

Query: 1331 LPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 1510
             PDG+  HLKYV KK VAN+LKYG +VERHLEDGDI                  ARIMPW
Sbjct: 419  KPDGSTTHLKYVNKKIVANDLKYGDIVERHLEDGDI------------------ARIMPW 460

Query: 1511 RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQ 1690
            RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQ
Sbjct: 461  RTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 520

Query: 1691 DFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVR 1870
            DFLTSSFLITRKDTFYDRA FSLMCS++GD M+SIDLPTPALIKP+ELWTGKQLFSVLVR
Sbjct: 521  DFLTSSFLITRKDTFYDRATFSLMCSFMGDAMDSIDLPTPALIKPVELWTGKQLFSVLVR 580

Query: 1871 PNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSV 2050
            PNA TRVF+NL VKE+I+  D ETMCP DGYVYFRNSELI GQLGKVTLGNGNK GLFSV
Sbjct: 581  PNACTRVFLNLTVKEKIYT-DNETMCPCDGYVYFRNSELISGQLGKVTLGNGNKDGLFSV 639

Query: 2051 LLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSS 2230
            LLRDYNS  AASCMNRLAKLSARWIGNHGFSIGIDDVQPGE LNQQKK  ID+GYR C  
Sbjct: 640  LLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEYLNQQKKRKIDEGYRECHE 699

Query: 2231 FIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSK 2410
             I  Y   +L  +PG NAA+TLE++IT VLN+IR TAG+VCM  LHWRNSPLIMSQCGSK
Sbjct: 700  HISSYSKGQLACEPGYNAAQTLELKITSVLNQIRTTAGNVCMNTLHWRNSPLIMSQCGSK 759

Query: 2411 GSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATE 2590
            GSAINISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATE
Sbjct: 760  GSAINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATE 819

Query: 2591 FFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDG 2770
            FFFHTMGGREGLVDTAVKTAETGYMSRRL+K+LEDLS++YDQTVR+AS GIVQF+YGDDG
Sbjct: 820  FFFHTMGGREGLVDTAVKTAETGYMSRRLIKSLEDLSVHYDQTVRNASSGIVQFLYGDDG 879

Query: 2771 MDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCS 2950
            MDPAKMEG++GIPLNL QL+ KV+ATCP +  D+LSPS+I+ ++++RLSK+DMSPE GCS
Sbjct: 880  MDPAKMEGKDGIPLNLSQLFMKVMATCPHRVLDTLSPSEILQIMDDRLSKHDMSPEGGCS 939

Query: 2951 SAFKNLLSDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFME 3127
            +AFK LL+DF++ RV  +R TR  LKL ED  +++D    E +AANISGIS+KQLQVF++
Sbjct: 940  AAFKKLLTDFVNSRVVLMRNTRRALKLDEDHTEQKDISLTERIAANISGISSKQLQVFLD 999

Query: 3128 TCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINA 3307
            TCISRYH KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINA
Sbjct: 1000 TCISRYHFKKVETGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIINA 1059

Query: 3308 AKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKER 3487
            AKNI TPIITA L  D    SA +VKG IEKTVLGEVA+A++IV KS++PYIS+  D   
Sbjct: 1060 AKNIKTPIITAKLLSDRDALSASIVKGSIEKTVLGEVAKAIQIVIKSHRPYISVKLDMGL 1119

Query: 3488 LKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSL 3667
            +K LHM  S +S++ +I +H    KIKLK EHI I     LRI+ P +D+++L F L+SL
Sbjct: 1120 IKALHMRISADSVQLSILNH---PKIKLKPEHIRILRSDKLRIYAPEADKSQLQFSLHSL 1176

Query: 3668 KSMLPKVIVKGISTVDRAVINCQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIW 3844
            K+MLPKVIVKGI T +R VI+  K   Y L +EGTNLLAVMGTPG+DA  TK NHV+E+ 
Sbjct: 1177 KAMLPKVIVKGIPTAERVVIDKTKQGIYKLFIEGTNLLAVMGTPGIDARNTKINHVIEVH 1236

Query: 3845 QTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSI 4024
            +TLG+EAAR  I+ EI DTM++HGMSID RHMMLLAD+MTYKGEVLGITRFG+ KMK S+
Sbjct: 1237 ETLGVEAARQSIVDEIHDTMRNHGMSIDKRHMMLLADLMTYKGEVLGITRFGIAKMKTSV 1296

Query: 4025 LMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPEFKYG 4204
            LMLASFEKT+EHLFNAS++GR+D+I GVSECIIMGIPM+LGTG LKV+QR+EQ+P+FKY 
Sbjct: 1297 LMLASFEKTAEHLFNASYSGREDKIHGVSECIIMGIPMRLGTGFLKVKQRLEQIPDFKYV 1356

Query: 4205 PDPIIC*EGNEVSDG*GLDHSWF------FNNN*NQDYILAVKFAH 4324
            P P++    N  + G     + +      F+N   + Y++ V +AH
Sbjct: 1357 PGPVL----NRNALGWSRHRTCYLPSFLEFSNGAQEHYMITVGYAH 1398


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Oryza
            brachyantha]
          Length = 1389

 Score = 1956 bits (5068), Expect = 0.0
 Identities = 973/1393 (69%), Positives = 1137/1393 (81%), Gaps = 18/1393 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEP+IED G R+IKSIRF  FSG ++R+ AEVQVWN+ +Y+   ++PV 
Sbjct: 1    MARPEEKLRCTKEPFIEDAGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNQE-MRPVP 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D+RMG ANK   C TCHG F +CPGHFGYL+L LPVFNVG+FN IL++LKCICK C
Sbjct: 60   NGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             R+LL EK+R EFL K RNP+AD  QK+ IMK VR+KCK  SRCP CG ING   K ++ 
Sbjct: 120  SRVLLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCK-LSRCPWCGFINGVAKKGRAG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            L +  +   T+D S EE + ALSH KEK+SF  VH+L P+ VL+LFK+M DEDCELL+LG
Sbjct: 179  LIILHDCSKTLDGSTEELKEALSHKKEKLSFSAVHMLDPATVLSLFKRMTDEDCELLNLG 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIVTEIA+PP PIRPSV V  G+ SNED +T              E+L       
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFM 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C +CW  LQ  VVEYINS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQHLQLQVVEYINSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNL+ITEVAIPILMA+VLTYPERV+++NIEKLRQC+RNGP KHPGANF+I  DGT+L
Sbjct: 359  SPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQTDGTKL 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
            HLKY +++  A +LKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE
Sbjct: 419  HLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            L+TRKD FYDR++F+L+CSY+GD ME+IDLPTPAL+KPIELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQLFSVLVRPNACTKV 598

Query: 1892 FVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNS 2071
            F+NL VKE+I+ K  ETMCP DG+VYFRNSEL+ GQ+GK TLGNGNK G+FS+L+RDYNS
Sbjct: 599  FLNLTVKEKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGNGNKDGMFSILVRDYNS 658

Query: 2072 DVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLYEN 2251
              AASCMNRLAK SAR+IGNHGFSIG+DDV+PGE L+QQKK  ID+GY+ C   I  +  
Sbjct: 659  HAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEGYKECHDLITSFSK 718

Query: 2252 RKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAINIS 2431
              LTL+PG NAA+TLE +IT VLN+IR+ AG++CM  LHWRNSPLIMSQCGSKGS INIS
Sbjct: 719  GALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIMSQCGSKGSPINIS 778

Query: 2432 QMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLT---------- 2581
            QM+ CVGQQSVGG RAPNGFIDRTLPHFPI SK PAAKGFVANSFY GLT          
Sbjct: 779  QMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYNGLTATEFFFHTMG 838

Query: 2582 -------ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGG 2740
                   ATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGG
Sbjct: 839  GIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGG 898

Query: 2741 IVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSK 2920
            IVQF+YGDDGMDPAKMEGE+G PLNLDQL+ KV+ATCP++ Q++LSP +I+ ++N++LS+
Sbjct: 899  IVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSE 958

Query: 2921 YDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDGQKEDSGTLENVAANISGIS 3100
            +D S +DGCS  FK LL DFL  R+  L+ TR  L L E+   +DS   E++AANISGIS
Sbjct: 959  HDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGKDSSIEESIAANISGIS 1018

Query: 3101 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGV 3280
            AKQLQVF++TC+SRYH KK+E              EPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1019 AKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1078

Query: 3281 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 3460
            PRIKEIINAAK ISTPIITA L       SAR+VKG +EK VLGEVAE +KIV KS+QP 
Sbjct: 1079 PRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPN 1138

Query: 3461 ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 3640
            + +  D +R++ LHM  S +S++ +I +H    +IKLK EH+ +     LR++P   D++
Sbjct: 1139 LVVKLDMQRIEDLHMGISADSVQLSILNH---PRIKLKSEHVRVIDKAKLRVYPTAIDKS 1195

Query: 3641 RLHFELNSLKSMLPKVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTK 3820
            +L +EL++LKSMLPKVIVKGI TV+RAVI+   DKY+LLVEGTNLLAVMGTPGVDA KTK
Sbjct: 1196 KLLYELHNLKSMLPKVIVKGIPTVERAVISQTGDKYSLLVEGTNLLAVMGTPGVDAMKTK 1255

Query: 3821 SNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFG 4000
            SNH+ME+ +TLGIEAAR  II EIQ TM SHGM+ID+RHMMLLAD+MTYKGE+LGITR+G
Sbjct: 1256 SNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEILGITRYG 1315

Query: 4001 MTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIE 4180
            + KMK S+LMLASFEKT+EHLFNAS++GR+DQIEGVSECIIMGIPMQLGTGILKVRQR++
Sbjct: 1316 IAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLD 1375

Query: 4181 QLPEFKYGPDPII 4219
             LPEFKY PDPI+
Sbjct: 1376 HLPEFKYQPDPIL 1388


>ref|XP_015636431.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Oryza sativa
            Japonica Group]
 emb|CAE02045.2| OJ990528_30.3 [Oryza sativa Japonica Group]
 emb|CAD41360.2| OSJNBa0076N16.24 [Oryza sativa Japonica Group]
 dbj|BAF15089.1| Os04g0492300 [Oryza sativa Japonica Group]
 emb|CAH67354.1| OSIGBa0130B08.14 [Oryza sativa]
 emb|CAH67535.1| H0425E08.3 [Oryza sativa]
 dbj|BAH00234.1| unnamed protein product [Oryza sativa Japonica Group]
 gb|EEC77539.1| hypothetical protein OsI_16437 [Oryza sativa Indica Group]
 dbj|BAS89853.1| Os04g0492300 [Oryza sativa Japonica Group]
          Length = 1383

 Score = 1954 bits (5061), Expect = 0.0
 Identities = 983/1387 (70%), Positives = 1136/1387 (81%), Gaps = 12/1387 (0%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEP+IED+G R+IKSIRF  FSG ++R+ AEVQVWN+ +Y+   +KPV 
Sbjct: 1    MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHE-MKPVP 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D+RMG ANK   C TCHG F +CPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             R+LL EK+R EFL K RNP+AD  QK+ IMK VR+KCK  SRCP CG ING   K ++ 
Sbjct: 120  SRVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCK-LSRCPWCGFINGVAKKGRAG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            L +  +   T+D S EE R ALSH KEK+S   V +L P+ VL+LFK+M DEDCELL+LG
Sbjct: 179  LIILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPAIVLSLFKRMTDEDCELLNLG 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIVTEIA+PP PIRPSV V  G+ SNED +T              E+L       
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFM 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C +CW  LQ  VVEYINS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQHLQLQVVEYINSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNL+ITEVAIPILMA+VLTYPERV+++NIEKLRQC+RNGP KHPGANF+I PDGT+L
Sbjct: 359  SPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGTKL 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
            HLKY +++  A +LKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE
Sbjct: 419  HLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            L+TRKD FYDR++FSL+CSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNACTKV 598

Query: 1892 FVNLIVKERIH------VKDTETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVL 2053
            F+NL VKE+I+        + E MCP DG+VYFRNSEL+ GQ+GK TLGNGNK G+FS L
Sbjct: 599  FLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKDGMFSTL 658

Query: 2054 LRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSF 2233
            +RDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LNQ+KKM ID GY+ C   
Sbjct: 659  VRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDL 718

Query: 2234 IDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKG 2413
            I  Y    L L+PG NAA+TLE  IT VLNEIR+ AG VCM  LHWRNSPLIMSQCGSKG
Sbjct: 719  IASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKG 778

Query: 2414 SAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEF 2593
            S INISQM+ACVGQQSVGGRRAPNGFIDRTLPHFPI SK PAAKGFVANSFYTGLTATEF
Sbjct: 779  SPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEF 838

Query: 2594 FFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGM 2773
            FFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGIVQF+YGDDGM
Sbjct: 839  FFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGM 898

Query: 2774 DPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSS 2953
            DPAKMEG++G PLNLDQL+ KV+ATCP++ Q++LSP +I+ ++N++LS++D S +DGCS 
Sbjct: 899  DPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSE 958

Query: 2954 AFKNLLSDFLHKRVAELRKTRTRLKLQEDGQKE-DSGTLENVAANISGISAKQLQVFMET 3130
             FK LL+ FL  R+  L+ TR  L L ED   E  S   E++AANISGIS KQLQVF++T
Sbjct: 959  KFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDT 1018

Query: 3131 CISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA 3310
            C+SRYH KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA
Sbjct: 1019 CLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA 1078

Query: 3311 KNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERL 3490
            K ISTPIITA L  +    SAR+VKG +EK VLGEVAEA+KIV KS+QP + +  D +R+
Sbjct: 1079 KKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRI 1138

Query: 3491 KTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLK 3670
            + LHM  S +S++ +I +H    KIKLK EH+ +     LRI+P   D+++L +EL+ LK
Sbjct: 1139 EALHMGISADSVQLSILNH---PKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLK 1195

Query: 3671 SMLPKVIVKGISTVDRAVIN---CQKDK-YNLLVEGTNLLAVMGTPGVDASKTKSNHVME 3838
            SMLPKVIVKGI TV+RAVI+    + DK Y LLVEGTNLLAVMGTPGVDA KTKSNH+ME
Sbjct: 1196 SMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIME 1255

Query: 3839 IWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKD 4018
            + +TLGIEAAR  II EIQ TMKSHGM+ID+RHMMLLAD+MTYKGE+LGITR+G+ KMK 
Sbjct: 1256 VNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKS 1315

Query: 4019 SILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPEFK 4198
            S+LMLASFEKT+EHLFNAS++GR+DQIEGVSECIIMGIPMQLGTGILKVRQR++ LPEFK
Sbjct: 1316 SVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFK 1375

Query: 4199 YGPDPII 4219
            Y PDPI+
Sbjct: 1376 YQPDPIL 1382


>ref|XP_020687153.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Dendrobium
            catenatum]
          Length = 1373

 Score = 1918 bits (4968), Expect = 0.0
 Identities = 964/1379 (69%), Positives = 1117/1379 (81%), Gaps = 4/1379 (0%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            M  GAEKLRCTKEPYIE  G ++I+SIRF   SG+DIRK AEVQVW N +YD   +KP  
Sbjct: 1    MNQGAEKLRCTKEPYIEVNGHQRIESIRFSVHSGDDIRKQAEVQVWKNVVYDVN-IKPAP 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
             GL+D RMGP N+   C TCHG FT+CPGHFG+L+LTLPVFNVGYFNSILNILKCICKAC
Sbjct: 60   DGLLDLRMGPPNRNFTCATCHGNFTECPGHFGWLKLTLPVFNVGYFNSILNILKCICKAC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
            GRILL E ER+ FL   R PRAD  QK++++K +R KC S   C  CG+ NG V K  S 
Sbjct: 120  GRILLLESERRIFLKTMRKPRADPTQKDHLLKKIRQKCGS--ECLHCGYKNGVVKKLGSS 177

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            L + E+F   +D S+ E R+ALSHLK+  SFQ +H+L P KVLALFK+M D+DCELL+L 
Sbjct: 178  LTIVEDFTRKIDGSMHEFRSALSHLKDGASFQLIHVLRPLKVLALFKRMLDQDCELLNLN 237

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQSNEDGLTAXXXXXXXXXXXXXEDLDGAAPLYN 994
             RPE LI+T+IA+PP+PIRPSVI+ +G S E+ +T              EDL+GAAPL+ 
Sbjct: 238  DRPEKLIITDIAVPPSPIRPSVIMDAGMSMENDITIILKGIVNTNSILREDLEGAAPLFK 297

Query: 995  CLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVIS 1174
            CLECW+LLQ  V EYINSEAP VP++K+RGL+QRLKGKQGRFR NLSGKRVEFTGRTVIS
Sbjct: 298  CLECWDLLQVQVAEYINSEAPCVPDNKNRGLIQRLKGKQGRFRGNLSGKRVEFTGRTVIS 357

Query: 1175 PDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLH 1354
            PDPNLKITEVAIP +MAQ+LTYPERV  HNIEKLRQCVRNG FK+PGANF +L  G+ + 
Sbjct: 358  PDPNLKITEVAIPTVMAQILTYPERVYRHNIEKLRQCVRNGRFKYPGANFAVLSSGSTMD 417

Query: 1355 LKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNES 1534
            LK+  +KNVAN+LKYG +V+RHLEDGD+VLFNRQPSLHRMS+M HRARIMPW+TLRFNES
Sbjct: 418  LKFEGRKNVANDLKYGDIVQRHLEDGDVVLFNRQPSLHRMSLMCHRARIMPWKTLRFNES 477

Query: 1535 VCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFL 1714
            VCNPYNADFDGDEMNLHVPQTEEARTEA  LMGVQNNLCTPKNGEILVASTQDFLTSSFL
Sbjct: 478  VCNPYNADFDGDEMNLHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFL 537

Query: 1715 ITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVF 1894
            ITRKDTFYDRA F+L+CSY+GDGMESIDLP PALIKP+ELWTGKQLF+VLVRPNA TRVF
Sbjct: 538  ITRKDTFYDRANFALLCSYMGDGMESIDLPAPALIKPVELWTGKQLFNVLVRPNASTRVF 597

Query: 1895 VNLIVKERIHVKD---TETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDY 2065
            +NL VKE+   K    +ETMCPRDG+VYFRNSELICGQLGK TLGNG+K GLFSVLLRDY
Sbjct: 598  LNLTVKEKCFSKPQNLSETMCPRDGFVYFRNSELICGQLGKATLGNGSKDGLFSVLLRDY 657

Query: 2066 NSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLY 2245
            N+  AASCM RLAKLSARWIGNHGFSIGIDDVQPGERL QQ K TIDDG R C  FI  Y
Sbjct: 658  NAYAAASCMGRLAKLSARWIGNHGFSIGIDDVQPGERLIQQNKRTIDDGNRECLDFIAKY 717

Query: 2246 ENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAIN 2425
               +LTL+ G +AA+TLE++I +VLN+IR  AG+VCM ELHWRNSPLIMSQCGSKGS IN
Sbjct: 718  NKGELTLETGCDAAQTLELKIHDVLNKIRSAAGNVCMNELHWRNSPLIMSQCGSKGSPIN 777

Query: 2426 ISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHT 2605
            ISQMIA VGQQSVGGRRAPNGFIDR LPHFPI SK P+AKGFVANSFYTGLTATEFFFHT
Sbjct: 778  ISQMIALVGQQSVGGRRAPNGFIDRALPHFPINSKTPSAKGFVANSFYTGLTATEFFFHT 837

Query: 2606 MGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAK 2785
            M GREGLVDTAVKTAETGYMSRRL+K +ED+SL+YD TVR ASG I QF+YGDDG+DPAK
Sbjct: 838  MAGREGLVDTAVKTAETGYMSRRLVKGMEDISLHYDLTVRDASGAIAQFLYGDDGLDPAK 897

Query: 2786 MEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKN 2965
            MEG+ G PLN DQLY KV+ATCP +  DSLSP++I+  +++R S+ +M+PE GCSS FK 
Sbjct: 898  MEGKEGSPLNFDQLYMKVMATCPHRENDSLSPAEILQTLDKRFSRCEMAPEGGCSSEFKQ 957

Query: 2966 LLSDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISR 3142
             LSDF+ KR+  L++TR  L+L E+    +     E ++  ISGISAKQL+VF+ETCISR
Sbjct: 958  KLSDFIQKRIVTLQQTRQALQLDENPAINKGCCKRETISTRISGISAKQLEVFLETCISR 1017

Query: 3143 YHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNIS 3322
            Y+ KKLE              EPGTQMTLKTFHFAGVASMN+TLGVPRIKEIINAAKNIS
Sbjct: 1018 YYLKKLEAGAAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINAAKNIS 1077

Query: 3323 TPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERLKTLH 3502
            TP+I   L       SAR+VKG +EKT LGEV++ +KIV K +Q YIS++ D ER+++L 
Sbjct: 1078 TPVIKTQLLSSSEALSARIVKGCLEKTTLGEVSKCIKIVLKPSQTYISVVLDMERIESLQ 1137

Query: 3503 MEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLP 3682
            M  S ES++ AI +H    +I LK EH+       L+I  P+  +++L F L+S+ ++LP
Sbjct: 1138 MRISSESVRFAILNH---PRIGLKPEHVITMSSHKLKISMPLVHKDQL-FPLHSMNTLLP 1193

Query: 3683 KVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIE 3862
            KVIVKGISTV RAVI   K+ Y+L VEGTN LAVMGTPGVDASKT +NHV+E+ QTLGIE
Sbjct: 1194 KVIVKGISTVKRAVIKKDKELYSLFVEGTNYLAVMGTPGVDASKTTTNHVIEVCQTLGIE 1253

Query: 3863 AARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASF 4042
            AAR  II+EI+ TM  HGMSID RHM LLAD+MTYKGEVLG+TRFG+TKMK+S+LMLASF
Sbjct: 1254 AARQTIINEIKFTMDGHGMSIDIRHMKLLADLMTYKGEVLGMTRFGLTKMKNSVLMLASF 1313

Query: 4043 EKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 4219
            EKTSEHLFN +++GRDD IEGVSE IIMGIPMQLGTGILKVRQR++ L E KYGPDPII
Sbjct: 1314 EKTSEHLFNGAYSGRDDHIEGVSERIIMGIPMQLGTGILKVRQRVQDLTELKYGPDPII 1372


>ref|XP_002446717.1| DNA-directed RNA polymerase III subunit 1 [Sorghum bicolor]
 gb|EES11045.1| hypothetical protein SORBI_3006G131200 [Sorghum bicolor]
          Length = 1391

 Score = 1914 bits (4957), Expect = 0.0
 Identities = 964/1395 (69%), Positives = 1125/1395 (80%), Gaps = 20/1395 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEP+IED+G R+IKSIRF   SG +IRK AEVQVWNN +Y    +KPV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYGHD-MKPVP 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RMG  NK+  C TCHG F+DCPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK  S CPRC + NG V K ++ 
Sbjct: 120  SRVLLFEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            L V  +    +D   EE + AL + KEKVS   V +L P+ VL+LF++M DEDCELL+LG
Sbjct: 179  LIVVHDCSKVLDGHTEELKNALQNKKEKVSANSVRVLDPATVLSLFRRMTDEDCELLNLG 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIV+EIA+PP PIRPSV+VGS + SNED +T              E L    P  
Sbjct: 239  DRPEKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLHTGGPFT 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C +CW  LQ  VVEY+NS+AP +P+S+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQYLQLQVVEYVNSDAPCLPDSQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPFK+PGANFV  PDG + 
Sbjct: 359  SPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQ 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
             LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            L+TRKDTFYDR++F+L+CSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA TRV
Sbjct: 539  LVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAHTRV 598

Query: 1892 FVNLIVKERIHVKDT-------------ETMCPRDGYVYFRNSELICGQLGKVTLGNGNK 2032
            F+NL V+E+I+ K               ETMCP DGYVYFRNSEL+ GQ+GK TLGNGNK
Sbjct: 599  FLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNK 658

Query: 2033 SGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDG 2212
             GL+SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK  ID G
Sbjct: 659  DGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEIDGG 718

Query: 2213 YRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIM 2392
            Y++C   I L+    L L PG NAA+TLE  IT VLNEIR  AG+VCM  LHWRNSPLIM
Sbjct: 719  YKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLIM 778

Query: 2393 SQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYT 2572
            SQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHFPI SK PAAKGFVANSFYT
Sbjct: 779  SQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANSFYT 838

Query: 2573 GLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQF 2752
            GLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGIVQF
Sbjct: 839  GLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQF 898

Query: 2753 IYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMS 2932
            +YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+LSP  I  ++ ++L ++D S
Sbjct: 899  LYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLEDKLLQHDTS 958

Query: 2933 PEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGISAKQ 3109
             + GCS  FK  L++FL KR+  ++ TR  L L ED  +K+DS   E+VAA ISGISAKQ
Sbjct: 959  SDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAIISGISAKQ 1018

Query: 3110 LQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRI 3289
            LQVF++TC+SRY  KK+E              EPGTQMTLKTFHFAGVASMNVTLGVPRI
Sbjct: 1019 LQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 1078

Query: 3290 KEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISI 3469
            KEIINAA+ ISTPIITA L       SAR+VKG +EK VLGEVA A++IV KS+QP + +
Sbjct: 1079 KEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLIV 1138

Query: 3470 IFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLH 3649
              D + +++LHM  S +S++ +I +H    KIKLK EH+ +     LRI+P  +D+ +L 
Sbjct: 1139 KLDMQLIESLHMGISADSVQLSILNH---PKIKLKSEHVRVIDRAKLRIYPAGTDKRKLQ 1195

Query: 3650 FELNSLKSMLPKVIVKGISTVDRAVINCQK-----DKYNLLVEGTNLLAVMGTPGVDASK 3814
             EL++LKS+LPKVIVKGI TV+R VI+  K     ++Y LLVEGTNLLAVMGTPGVDA+K
Sbjct: 1196 LELHNLKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLLVEGTNLLAVMGTPGVDATK 1255

Query: 3815 TKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITR 3994
            TKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE+LGITR
Sbjct: 1256 TKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILGITR 1315

Query: 3995 FGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQR 4174
            +G+ KMK S+LMLASFEKTSEHLFNAS++GR+DQIEGVSECIIMGIPMQLGTGILKVRQR
Sbjct: 1316 YGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQR 1375

Query: 4175 IEQLPEFKYGPDPII 4219
            ++ +PEFKY PDPI+
Sbjct: 1376 LDHVPEFKYQPDPIL 1390


>ref|XP_008669237.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
 gb|ONM16380.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 1394

 Score = 1903 bits (4930), Expect = 0.0
 Identities = 961/1398 (68%), Positives = 1122/1398 (80%), Gaps = 23/1398 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEP+IED+G R+IKSIRF   SG +IRK AEVQVWNN +YD   + PV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRD-MTPVP 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RMG   K+  C TCHG F+DCPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK  S CPRC + NG V K ++ 
Sbjct: 120  SRVLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            L V  +    +D   EE + AL + KEKVS   V +L P+ VL+LF++M DEDCELL+LG
Sbjct: 179  LIVVHDCSKVLDGHTEELKNALQNKKEKVSASSVLVLDPATVLSLFRRMIDEDCELLNLG 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIVTEIA+PP PIRPSV+VG+ + SNED +T              E L    P  
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFT 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C +CW  LQ  VVEY+NS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQYLQLQVVEYVNSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPFK+PGANFV  PDG + 
Sbjct: 359  SPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQ 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
             LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            L+TRKDTFYDR++F+L+CSY+GDGME+IDLPTPALIKP+ELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAHTKV 598

Query: 1892 FVNLIVKERIH------------VKDT----ETMCPRDGYVYFRNSELICGQLGKVTLGN 2023
            F+NL V+E+I+            VK+T    ETMCP DGYVYFRNSEL+ GQ+GK TLGN
Sbjct: 599  FLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGN 658

Query: 2024 GNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2203
            GNK GL+SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK  I
Sbjct: 659  GNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEI 718

Query: 2204 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 2383
            D GY++C   I L+    L L PG NAA+TLE  IT VLNEIR  AG+VCM  LHWRNSP
Sbjct: 719  DGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSP 778

Query: 2384 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 2563
            LIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHFPI SK PAAKGFVANS
Sbjct: 779  LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANS 838

Query: 2564 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 2743
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGI
Sbjct: 839  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGI 898

Query: 2744 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 2923
            VQF+YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+LSP  I  ++ ++  ++
Sbjct: 899  VQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPVGIKQMLEDKFLQH 958

Query: 2924 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGIS 3100
            D S + GCS+ FK  L++FL KR+  ++ TR  L L ED  +K+DS   E++AA ISGIS
Sbjct: 959  DTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAAIISGIS 1018

Query: 3101 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGV 3280
            AKQLQVF++TC+SRY  KK+E              EPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1019 AKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1078

Query: 3281 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 3460
            PRIKEIINAAK ISTPIITA L       SAR+VKG +EK VLGEVA  ++ V KS+ P 
Sbjct: 1079 PRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVLKSSLPN 1138

Query: 3461 ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 3640
            + +  D + ++TLHM  S +S+K +I +H    K+KLK EH+ +     LRI+P  +D+ 
Sbjct: 1139 LVVKLDMQLIETLHMGISADSVKLSILNH---PKLKLKSEHVRVIDRAKLRIYPAGTDKL 1195

Query: 3641 RLHFELNSLKSMLPKVIVKGISTVDRAVI-----NCQKDKYNLLVEGTNLLAVMGTPGVD 3805
            +L  EL++LKS+LPKVIVKGI TV+R VI     N   ++Y LLVEGTNLLAVMGTPGVD
Sbjct: 1196 KLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGTNLLAVMGTPGVD 1255

Query: 3806 ASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLG 3985
            A KTKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE+LG
Sbjct: 1256 ARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILG 1315

Query: 3986 ITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKV 4165
            ITR+G+ KMK S+LMLASFEKT+EHLFNAS++GR DQIEGVSECIIMGIPMQLGTGILKV
Sbjct: 1316 ITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLGTGILKV 1375

Query: 4166 RQRIEQLPEFKYGPDPII 4219
            RQR++ +PEFKY PDPI+
Sbjct: 1376 RQRLDHVPEFKYQPDPIL 1393


>gb|PKU65969.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
          Length = 1395

 Score = 1896 bits (4912), Expect = 0.0
 Identities = 954/1370 (69%), Positives = 1108/1370 (80%), Gaps = 4/1370 (0%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            M  GAEKLRCTKEPYIE  G ++I+SIRF   SG+DIRK AEVQVW N +YD   +KP  
Sbjct: 1    MNQGAEKLRCTKEPYIEVNGHQRIESIRFSVHSGDDIRKQAEVQVWKNVVYDVN-IKPAP 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
             GL+D RMGP N+   C TCHG FT+CPGHFG+L+LTLPVFNVGYFNSILNILKCICKAC
Sbjct: 60   DGLLDLRMGPPNRNFTCATCHGNFTECPGHFGWLKLTLPVFNVGYFNSILNILKCICKAC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
            GRILL E ER+ FL   R PRAD  QK++++K +R KC S   C  CG+ NG V K  S 
Sbjct: 120  GRILLLESERRIFLKTMRKPRADPTQKDHLLKKIRQKCGS--ECLHCGYKNGVVKKLGSS 177

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            L + E+F   +D S+ E R+ALSHLK+  SFQ +H+L P KVLALFK+M D+DCELL+L 
Sbjct: 178  LTIVEDFTRKIDGSMHEFRSALSHLKDGASFQLIHVLRPLKVLALFKRMLDQDCELLNLN 237

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQSNEDGLTAXXXXXXXXXXXXXEDLDGAAPLYN 994
             RPE LI+T+IA+PP+PIRPSVI+ +G S E+ +T              EDL+GAAPL+ 
Sbjct: 238  DRPEKLIITDIAVPPSPIRPSVIMDAGMSMENDITIILKGIVNTNSILREDLEGAAPLFK 297

Query: 995  CLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVIS 1174
            CLECW+LLQ  V EYINSEAP VP++K+RGL+QRLKGKQGRFR NLSGKRVEFTGRTVIS
Sbjct: 298  CLECWDLLQVQVAEYINSEAPCVPDNKNRGLIQRLKGKQGRFRGNLSGKRVEFTGRTVIS 357

Query: 1175 PDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLH 1354
            PDPNLKITEVAIP +MAQ+LTYPERV  HNIEKLRQCVRNG FK+PGANF +L  G+ + 
Sbjct: 358  PDPNLKITEVAIPTVMAQILTYPERVYRHNIEKLRQCVRNGRFKYPGANFAVLSSGSTMD 417

Query: 1355 LKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNES 1534
            LK+  +KNVAN+LKYG +V+RHLEDGD+VLFNRQPSLHRMS+M HRARIMPW+TLRFNES
Sbjct: 418  LKFEGRKNVANDLKYGDIVQRHLEDGDVVLFNRQPSLHRMSLMCHRARIMPWKTLRFNES 477

Query: 1535 VCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFL 1714
            VCNPYNADFDGDEMNLHVPQTEEARTEA  LMGVQNNLCTPKNGEILVASTQDFLTSSFL
Sbjct: 478  VCNPYNADFDGDEMNLHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFL 537

Query: 1715 ITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVF 1894
            ITRKDTFYDRA F+L+CSY+GDGMESIDLP PALIKP+ELWTGKQLF+VLVRPNA TRVF
Sbjct: 538  ITRKDTFYDRANFALLCSYMGDGMESIDLPAPALIKPVELWTGKQLFNVLVRPNASTRVF 597

Query: 1895 VNLIVKERIHVKD---TETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDY 2065
            +NL VKE+   K    +ETMCPRDG+VYFRNSELICGQLGK TLGNG+K GLFSVLLRDY
Sbjct: 598  LNLTVKEKCFSKPQNLSETMCPRDGFVYFRNSELICGQLGKATLGNGSKDGLFSVLLRDY 657

Query: 2066 NSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYRRCSSFIDLY 2245
            N+  AASCM RLAKLSARWIGNHGFSIGIDDVQPGERL QQ K TIDDG R C  FI  Y
Sbjct: 658  NAYAAASCMGRLAKLSARWIGNHGFSIGIDDVQPGERLIQQNKRTIDDGNRECLDFIAKY 717

Query: 2246 ENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAIN 2425
               +LTL+ G +AA+TLE++I +VLN+IR  AG+VCM ELHWRNSPLIMSQCGSKGS IN
Sbjct: 718  NKGELTLETGCDAAQTLELKIHDVLNKIRSAAGNVCMNELHWRNSPLIMSQCGSKGSPIN 777

Query: 2426 ISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFHT 2605
            ISQMIA VGQQSVGGRRAPNGFIDR LPHFPI SK P+AKGFVANSFYTGLTATEFFFHT
Sbjct: 778  ISQMIALVGQQSVGGRRAPNGFIDRALPHFPINSKTPSAKGFVANSFYTGLTATEFFFHT 837

Query: 2606 MGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPAK 2785
            M GREGLVDTAVKTAETGYMSRRL+K +ED+SL+YD TVR ASG I QF+YGDDG+DPAK
Sbjct: 838  MAGREGLVDTAVKTAETGYMSRRLVKGMEDISLHYDLTVRDASGAIAQFLYGDDGLDPAK 897

Query: 2786 MEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFKN 2965
            MEG+ G PLN DQLY KV+ATCP +  DSLSP++I+  +++R S+ +M+PE GCSS FK 
Sbjct: 898  MEGKEGSPLNFDQLYMKVMATCPHRENDSLSPAEILQTLDKRFSRCEMAPEGGCSSEFKQ 957

Query: 2966 LLSDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISGISAKQLQVFMETCISR 3142
             LSDF+ KR+  L++TR  L+L E+    +     E ++  ISGISAKQL+VF+ETCISR
Sbjct: 958  KLSDFIQKRIVTLQQTRQALQLDENPAINKGCCKRETISTRISGISAKQLEVFLETCISR 1017

Query: 3143 YHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNIS 3322
            Y+ KKLE              EPGTQMTLKTFHFAGVASMN+TLGVPRIKEIINAAKNIS
Sbjct: 1018 YYLKKLEAGAAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINAAKNIS 1077

Query: 3323 TPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERLKTLH 3502
            TP+I   L       SAR+VKG +EKT LGEV++ +KIV K +Q YIS++ D ER+++L 
Sbjct: 1078 TPVIKTQLLSSSEALSARIVKGCLEKTTLGEVSKCIKIVLKPSQTYISVVLDMERIESLQ 1137

Query: 3503 MEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLP 3682
            M  S ES++ AI +H    +I LK EH+       L+I  P+  +++L F L+S+ ++LP
Sbjct: 1138 MRISSESVRFAILNH---PRIGLKPEHVITMSSHKLKISMPLVHKDQL-FPLHSMNTLLP 1193

Query: 3683 KVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIE 3862
            KVIVKGISTV RAVI   K+ Y+L VEGTN LAVMGTPGVDASKT +NHV+E+ QTLGIE
Sbjct: 1194 KVIVKGISTVKRAVIKKDKELYSLFVEGTNYLAVMGTPGVDASKTTTNHVIEVCQTLGIE 1253

Query: 3863 AARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASF 4042
            AAR  II+EI+ TM  HGMSID RHM LLAD+MTYKGEVLG+TRFG+TKMK+S+LMLASF
Sbjct: 1254 AARQTIINEIKFTMDGHGMSIDIRHMKLLADLMTYKGEVLGMTRFGLTKMKNSVLMLASF 1313

Query: 4043 EKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPE 4192
            EKTSEHLFN +++GRDD IEGVSE IIMGIPMQLGTGILKVRQR  ++ +
Sbjct: 1314 EKTSEHLFNGAYSGRDDHIEGVSERIIMGIPMQLGTGILKVRQRYAEITQ 1363


>ref|XP_004976057.1| DNA-directed RNA polymerase III subunit 1 [Setaria italica]
          Length = 1397

 Score = 1893 bits (4904), Expect = 0.0
 Identities = 960/1401 (68%), Positives = 1116/1401 (79%), Gaps = 26/1401 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEP+IED+G R+IKSIRF   SG +IRK AEVQVWN+ +Y+   +KPV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEHD-MKPVP 59

Query: 275  HGLIDSRMGPANKKTV---CGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCIC 445
            +GL+D RMG A+KK     C TCHG F +CPGHFGYL+L LPVFNVG+FN IL++LKCIC
Sbjct: 60   NGLLDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCIC 119

Query: 446  KACGRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKA 625
            K C R+LL EK+R+EFL K RNPRAD  QK+ IMK VR+KCK  + CPRC + NG V K 
Sbjct: 120  KGCSRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCK-LTCCPRCEYKNGVVKKG 178

Query: 626  KSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELL 805
            +  L V  +    +D   EE + AL H KEKVS   V +L P+  L+LF++M DEDCELL
Sbjct: 179  RVGLIVIHDCSKILDGHTEELKNALQHKKEKVSTSSVRMLDPATALSLFRRMVDEDCELL 238

Query: 806  HLGVRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAA 982
            +LG RPE LIVTEIA+PP PIRPSV+VG+ + SNED +TA             E L    
Sbjct: 239  NLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTGG 298

Query: 983  PLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGR 1162
                C +CW  LQ  VVE++NS+AP +PES+HRGLVQRLKGK GRFR NLSGKR E+TGR
Sbjct: 299  LFSKCFDCWQQLQLQVVEFVNSDAPCLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 358

Query: 1163 TVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDG 1342
            TVISPDPNL+ITEVAIP+LMA+VLTYPERV+++N+EKLRQC+RNGP+KHPGANF+I PDG
Sbjct: 359  TVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANFIITPDG 418

Query: 1343 TRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLR 1522
            T+L LKY +++  A +LK G  VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLR
Sbjct: 419  TKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLR 478

Query: 1523 FNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLT 1702
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 479  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 538

Query: 1703 SSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQ 1882
            SSFL+TRKD FYDR++F+L+CSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA+
Sbjct: 539  SSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAR 598

Query: 1883 TRVFVNLIVKERIHVKDTE----------------TMCPRDGYVYFRNSELICGQLGKVT 2014
            T+VF+NL VKE+I+ K  E                TMCP DGYVYFRNSEL+ GQ+GK T
Sbjct: 599  TKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKAT 658

Query: 2015 LGNGNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKK 2194
            LGNGNK G++SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK
Sbjct: 659  LGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKK 718

Query: 2195 MTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWR 2374
              ID+GY++C   I L+    L L PG NAA+TLE +IT VLNEIR  AG+VCM  LHWR
Sbjct: 719  KKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWR 778

Query: 2375 NSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFV 2554
            NSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRTLPHFPI SK PAAKGFV
Sbjct: 779  NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFV 838

Query: 2555 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSAS 2734
            ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+AS
Sbjct: 839  ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNAS 898

Query: 2735 GGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERL 2914
            GGIVQF+YGDDGMDPAKMEG++G PLNLDQL+ KV ATCP +  D+LSP  I  ++ ++L
Sbjct: 899  GGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKL 958

Query: 2915 SKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANIS 3091
            +++  S + GCS  FK  L  FL +R+  L+ TR  L L E    K DS   E +AANIS
Sbjct: 959  TQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAANIS 1018

Query: 3092 GISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVT 3271
            GISAKQLQVF++TC SRY+ K +E              EPGTQMTLKTFHFAGVASMNVT
Sbjct: 1019 GISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1078

Query: 3272 LGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSN 3451
            LGVPRIKEIINAAK ISTPIIT  L       SAR+VKG +EK VLGEVA A+KIV KS+
Sbjct: 1079 LGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSS 1138

Query: 3452 QPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVS 3631
            QP + +  D + ++ LHM  S +S++ +I +H    KIKLK EH+ +     LRI+P  +
Sbjct: 1139 QPNLVVKLDMQLIEALHMGISADSVQLSILNH---PKIKLKSEHVRVIDRAKLRIYPAGT 1195

Query: 3632 DRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQK-----DKYNLLVEGTNLLAVMGTP 3796
            D+++L  EL++LK+MLPKVIVKGI TV+R VI+ +K     +KYNLLVEGTNLLAVMGTP
Sbjct: 1196 DKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLLAVMGTP 1255

Query: 3797 GVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGE 3976
            GVDA  TKSNH+ME+  TLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE
Sbjct: 1256 GVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGE 1315

Query: 3977 VLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGI 4156
            VLGITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+D+IEGVSECIIMGIPMQLGTGI
Sbjct: 1316 VLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTGI 1375

Query: 4157 LKVRQRIEQLPEFKYGPDPII 4219
            LKVRQR++ LPE KY PDPI+
Sbjct: 1376 LKVRQRLDHLPELKYQPDPIL 1396


>gb|ONM16376.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 1389

 Score = 1890 bits (4897), Expect = 0.0
 Identities = 957/1398 (68%), Positives = 1118/1398 (79%), Gaps = 23/1398 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEP+IED+G R+IKSIRF   SG +IRK AEVQVWNN +YD   + PV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRD-MTPVP 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RMG   K+  C TCHG F+DCPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK  S CPRC + NG V K ++ 
Sbjct: 120  SRVLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            L V  +    +D   EE + AL + KEKVS   V +L P+ VL+LF++M DEDCELL+LG
Sbjct: 179  LIVVHDCSKVLDGHTEELKNALQNKKEKVSASSVLVLDPATVLSLFRRMIDEDCELLNLG 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIVTEIA+PP PIRPSV+VG+ + SNED +T              E L    P  
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFT 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C +CW  LQ  VVEY+NS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQYLQLQVVEYVNSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPFK+PGANFV  PDG + 
Sbjct: 359  SPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQ 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
             LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            L+TRKDTFYDR++F+L+CSY+GDGME+IDLPTPALIKP+ELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAHTKV 598

Query: 1892 FVNLIVKERIH------------VKDT----ETMCPRDGYVYFRNSELICGQLGKVTLGN 2023
            F+NL V+E+I+            VK+T    ETMCP DGYVYFRNSEL+ GQ+GK TLGN
Sbjct: 599  FLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGN 658

Query: 2024 GNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2203
            GNK GL+SVLLRDYNS  AASCMNR     AR+IGNHGFSIG+DDVQPGE LN+QKK  I
Sbjct: 659  GNKDGLYSVLLRDYNSHAAASCMNR-----ARFIGNHGFSIGVDDVQPGEHLNRQKKKEI 713

Query: 2204 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 2383
            D GY++C   I L+    L L PG NAA+TLE  IT VLNEIR  AG+VCM  LHWRNSP
Sbjct: 714  DGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSP 773

Query: 2384 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 2563
            LIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHFPI SK PAAKGFVANS
Sbjct: 774  LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANS 833

Query: 2564 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 2743
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGI
Sbjct: 834  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGI 893

Query: 2744 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 2923
            VQF+YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+LSP  I  ++ ++  ++
Sbjct: 894  VQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPVGIKQMLEDKFLQH 953

Query: 2924 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGIS 3100
            D S + GCS+ FK  L++FL KR+  ++ TR  L L ED  +K+DS   E++AA ISGIS
Sbjct: 954  DTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAAIISGIS 1013

Query: 3101 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGV 3280
            AKQLQVF++TC+SRY  KK+E              EPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1014 AKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1073

Query: 3281 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 3460
            PRIKEIINAAK ISTPIITA L       SAR+VKG +EK VLGEVA  ++ V KS+ P 
Sbjct: 1074 PRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVLKSSLPN 1133

Query: 3461 ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 3640
            + +  D + ++TLHM  S +S+K +I +H    K+KLK EH+ +     LRI+P  +D+ 
Sbjct: 1134 LVVKLDMQLIETLHMGISADSVKLSILNH---PKLKLKSEHVRVIDRAKLRIYPAGTDKL 1190

Query: 3641 RLHFELNSLKSMLPKVIVKGISTVDRAVI-----NCQKDKYNLLVEGTNLLAVMGTPGVD 3805
            +L  EL++LKS+LPKVIVKGI TV+R VI     N   ++Y LLVEGTNLLAVMGTPGVD
Sbjct: 1191 KLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGTNLLAVMGTPGVD 1250

Query: 3806 ASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLG 3985
            A KTKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE+LG
Sbjct: 1251 ARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILG 1310

Query: 3986 ITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKV 4165
            ITR+G+ KMK S+LMLASFEKT+EHLFNAS++GR DQIEGVSECIIMGIPMQLGTGILKV
Sbjct: 1311 ITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLGTGILKV 1370

Query: 4166 RQRIEQLPEFKYGPDPII 4219
            RQR++ +PEFKY PDPI+
Sbjct: 1371 RQRLDHVPEFKYQPDPIL 1388


>gb|ONM16381.1| DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 1394

 Score = 1890 bits (4896), Expect = 0.0
 Identities = 959/1400 (68%), Positives = 1120/1400 (80%), Gaps = 25/1400 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEP+IED+G R+IKSIRF   SG +IRK AEVQVWNN +YD   + PV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYDRD-MTPVP 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RMG   K+  C TCHG F+DCPGHFGYL+L LPVFNVG+FN IL++LKCICK+C
Sbjct: 60   NGLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK  S CPRC + NG V K ++ 
Sbjct: 120  SRVLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            L V  +    +D   EE + AL + KEKVS   V +L P+ VL+LF++M DEDCELL+LG
Sbjct: 179  LIVVHDCSKVLDGHTEELKNALQNKKEKVSASSVLVLDPATVLSLFRRMIDEDCELLNLG 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIVTEIA+PP PIRPSV+VG+ + SNED +T              E L    P  
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFT 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C +CW  LQ  VVEY+NS+APS+PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQYLQLQVVEYVNSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNLKITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGPFK+PGANFV  PDG + 
Sbjct: 359  SPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQ 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
             LKY +++  A +LK GC+VERHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            L+TRKDTFYDR++F+L+CSY+GDGME+IDLPTPALIKP+ELWTGKQLFSVLVRPNA T+V
Sbjct: 539  LVTRKDTFYDRSSFTLLCSYLGDGMENIDLPTPALIKPVELWTGKQLFSVLVRPNAHTKV 598

Query: 1892 FVNLIVKERIH------------VKDT----ETMCPRDGYVYFRNSELICGQLGKVTLG- 2020
            F+NL V+E+I+            VK+T    ETMCP DGYVYFRNSEL+ GQ+GK TLG 
Sbjct: 599  FLNLAVQEKIYSKKKGKKEGGEEVKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGN 658

Query: 2021 -NGNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKM 2197
             NGNK GL+SVLLRDYNS  AASCMNRLAK   R+IGNHGFSIG+DDVQPGE LN+QKK 
Sbjct: 659  CNGNKDGLYSVLLRDYNSHAAASCMNRLAKF--RFIGNHGFSIGVDDVQPGEHLNRQKKK 716

Query: 2198 TIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRN 2377
             ID GY++C   I L+    L L PG NAA+TLE  IT VLNEIR  AG+VCM  LHWRN
Sbjct: 717  EIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRN 776

Query: 2378 SPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVA 2557
            SPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GF++RTLPHFPI SK PAAKGFVA
Sbjct: 777  SPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVA 836

Query: 2558 NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASG 2737
            NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASG
Sbjct: 837  NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASG 896

Query: 2738 GIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLS 2917
            GIVQF+YGDDGMDPAKMEG++G+PLNLDQL+ KV+ATCP++  D+LSP  I  ++ ++  
Sbjct: 897  GIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPVGIKQMLEDKFL 956

Query: 2918 KYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISG 3094
            ++D S + GCS+ FK  L++FL KR+  ++ TR  L L ED  +K+DS   E++AA ISG
Sbjct: 957  QHDTSSDGGCSAEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCLEESIAAIISG 1016

Query: 3095 ISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTL 3274
            ISAKQLQVF++TC+SRY  KK+E              EPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1017 ISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1076

Query: 3275 GVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQ 3454
            GVPRIKEIINAAK ISTPIITA L       SAR+VKG +EK VLGEVA  ++ V KS+ 
Sbjct: 1077 GVPRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEKAVLGEVAATIQTVLKSSL 1136

Query: 3455 PYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSD 3634
            P + +  D + ++TLHM  S +S+K +I +H    K+KLK EH+ +     LRI+P  +D
Sbjct: 1137 PNLVVKLDMQLIETLHMGISADSVKLSILNH---PKLKLKSEHVRVIDRAKLRIYPAGTD 1193

Query: 3635 RNRLHFELNSLKSMLPKVIVKGISTVDRAVI-----NCQKDKYNLLVEGTNLLAVMGTPG 3799
            + +L  EL++LKS+LPKVIVKGI TV+R VI     N   ++Y LLVEGTNLLAVMGTPG
Sbjct: 1194 KLKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATERYQLLVEGTNLLAVMGTPG 1253

Query: 3800 VDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEV 3979
            VDA KTKSNH+ME  QTLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGE+
Sbjct: 1254 VDARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEI 1313

Query: 3980 LGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGIL 4159
            LGITR+G+ KMK S+LMLASFEKT+EHLFNAS++GR DQIEGVSECIIMGIPMQLGTGIL
Sbjct: 1314 LGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVSECIIMGIPMQLGTGIL 1373

Query: 4160 KVRQRIEQLPEFKYGPDPII 4219
            KVRQR++ +PEFKY PDPI+
Sbjct: 1374 KVRQRLDHVPEFKYQPDPIL 1393


>gb|KQK97866.1| hypothetical protein SETIT_009186mg [Setaria italica]
          Length = 1394

 Score = 1889 bits (4894), Expect = 0.0
 Identities = 956/1398 (68%), Positives = 1113/1398 (79%), Gaps = 23/1398 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEP+IED+G R+IKSIRF   SG +IRK AEVQVWN+ +Y+   +KPV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEHD-MKPVP 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
            +GL+D RM   + +  C TCHG F +CPGHFGYL+L LPVFNVG+FN IL++LKCICK C
Sbjct: 60   NGLLDMRMVMTHTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQ 634
             R+LL EK+R+EFL K RNPRAD  QK+ IMK VR+KCK  + CPRC + NG V K +  
Sbjct: 120  SRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCK-LTCCPRCEYKNGVVKKGRVG 178

Query: 635  LAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLG 814
            L V  +    +D   EE + AL H KEKVS   V +L P+  L+LF++M DEDCELL+LG
Sbjct: 179  LIVIHDCSKILDGHTEELKNALQHKKEKVSTSSVRMLDPATALSLFRRMVDEDCELLNLG 238

Query: 815  VRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAAPLY 991
             RPE LIVTEIA+PP PIRPSV+VG+ + SNED +TA             E L       
Sbjct: 239  DRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTGGLFS 298

Query: 992  NCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVI 1171
             C +CW  LQ  VVE++NS+AP +PES+HRGLVQRLKGK GRFR NLSGKR E+TGRTVI
Sbjct: 299  KCFDCWQQLQLQVVEFVNSDAPCLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVI 358

Query: 1172 SPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRL 1351
            SPDPNL+ITEVAIP+LMA+VLTYPERV+++N+EKLRQC+RNGP+KHPGANF+I PDGT+L
Sbjct: 359  SPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANFIITPDGTKL 418

Query: 1352 HLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 1531
             LKY +++  A +LK G  VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLRFNE
Sbjct: 419  SLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNE 478

Query: 1532 SVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSF 1711
            SVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLTSSF
Sbjct: 479  SVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSF 538

Query: 1712 LITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRV 1891
            L+TRKD FYDR++F+L+CSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA+T+V
Sbjct: 539  LVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNARTKV 598

Query: 1892 FVNLIVKERIHVKDTE----------------TMCPRDGYVYFRNSELICGQLGKVTLGN 2023
            F+NL VKE+I+ K  E                TMCP DGYVYFRNSEL+ GQ+GK TLGN
Sbjct: 599  FLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGN 658

Query: 2024 GNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTI 2203
            GNK G++SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK  I
Sbjct: 659  GNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKKI 718

Query: 2204 DDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSP 2383
            D+GY++C   I L+    L L PG NAA+TLE +IT VLNEIR  AG+VCM  LHWRNSP
Sbjct: 719  DEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWRNSP 778

Query: 2384 LIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANS 2563
            LIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRTLPHFPI SK PAAKGFVANS
Sbjct: 779  LIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFVANS 838

Query: 2564 FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGI 2743
            FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+ASGGI
Sbjct: 839  FYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGI 898

Query: 2744 VQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKY 2923
            VQF+YGDDGMDPAKMEG++G PLNLDQL+ KV ATCP +  D+LSP  I  ++ ++L+++
Sbjct: 899  VQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDDIKQMLEDKLTQH 958

Query: 2924 DMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANISGIS 3100
              S + GCS  FK  L  FL +R+  L+ TR  L L E    K DS   E +AANISGIS
Sbjct: 959  KTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCIEEIIAANISGIS 1018

Query: 3101 AKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGV 3280
            AKQLQVF++TC SRY+ K +E              EPGTQMTLKTFHFAGVASMNVTLGV
Sbjct: 1019 AKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1078

Query: 3281 PRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPY 3460
            PRIKEIINAAK ISTPIIT  L       SAR+VKG +EK VLGEVA A+KIV KS+QP 
Sbjct: 1079 PRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPN 1138

Query: 3461 ISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRN 3640
            + +  D + ++ LHM  S +S++ +I +H    KIKLK EH+ +     LRI+P  +D++
Sbjct: 1139 LVVKLDMQLIEALHMGISADSVQLSILNH---PKIKLKSEHVRVIDRAKLRIYPAGTDKS 1195

Query: 3641 RLHFELNSLKSMLPKVIVKGISTVDRAVINCQK-----DKYNLLVEGTNLLAVMGTPGVD 3805
            +L  EL++LK+MLPKVIVKGI TV+R VI+ +K     +KYNLLVEGTNLLAVMGTPGVD
Sbjct: 1196 KLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLLAVMGTPGVD 1255

Query: 3806 ASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLG 3985
            A  TKSNH+ME+  TLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKGEVLG
Sbjct: 1256 ARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEVLG 1315

Query: 3986 ITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKV 4165
            ITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+D+IEGVSECIIMGIPMQLGTGILKV
Sbjct: 1316 ITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTGILKV 1375

Query: 4166 RQRIEQLPEFKYGPDPII 4219
            RQR++ LPE KY PDPI+
Sbjct: 1376 RQRLDHLPELKYQPDPIL 1393


>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Nelumbo
            nucifera]
          Length = 1392

 Score = 1889 bits (4892), Expect = 0.0
 Identities = 959/1396 (68%), Positives = 1115/1396 (79%), Gaps = 21/1396 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   +++  TKEPYIED+GPRKIKSIRF  FSG++IRK AEVQVW +  YD    KP+ 
Sbjct: 1    MANTQDRMLFTKEPYIEDVGPRKIKSIRFSMFSGDEIRKAAEVQVWRSVYYDVNR-KPID 59

Query: 275  HGLIDSRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKAC 454
             GL+DSRMGPA+K  +C TC G FTDCPGHFGYL L LPVFNVGYF++IL+ILKCICK+C
Sbjct: 60   DGLLDSRMGPASKSGICTTCDGSFTDCPGHFGYLNLALPVFNVGYFSTILDILKCICKSC 119

Query: 455  GRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKC------KSFSRCPRCGHINGNV 616
             RILL E++RK++L K R+ +AD  QKNN+MK +  KC      K   +C RCG+ING V
Sbjct: 120  ARILLEEEKRKDYLKKMRSSKADALQKNNLMKQIVKKCTTMLSSKKALKCTRCGYINGFV 179

Query: 617  SKAKS------QLAVAENFRTTVDESLEECRAALSHLKE-KVSFQPVHLLTPSKVLALFK 775
             K  S       L +  +     DESLEEC +A+SH KE K SF+ VH+L P ++LALFK
Sbjct: 180  KKGASISGTGSTLGIVHDRSKVNDESLEECSSAISHKKESKASFRVVHVLNPVRILALFK 239

Query: 776  KMPDEDCELLHLGVRPENLIVTEIAIPPAPIRPSVIVGSG-QSNEDGLTAXXXXXXXXXX 952
            +M DEDCELL+L  RPE LI+T+IA+PP  IRPSV + +G  SNED +T+          
Sbjct: 240  RMVDEDCELLYLYDRPEKLIITDIAVPPIAIRPSVFMDAGTMSNEDDITSKLSAIIRANA 299

Query: 953  XXXEDLDGAAPLYNCLECWNLLQGFVVEYINSEAPSVPESKH-----RGLVQRLKGKQGR 1117
               +DL GA P   CL  W+ LQ  V +YINS+   +P S       RG VQRLKGKQGR
Sbjct: 300  PLRQDLQGANPKSKCLLDWDQLQIEVAQYINSDVRGIPTSMQPSKPLRGFVQRLKGKQGR 359

Query: 1118 FRCNLSGKRVEFTGRTVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNG 1297
            FR NLSGKRVE+TGRTVISPDPNLKITEVAIPILMAQ+LTYPERV+HHNIEKLRQCVRNG
Sbjct: 360  FRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSHHNIEKLRQCVRNG 419

Query: 1298 PFKHPGANFVILPDGTRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMS 1477
              K+PGANF+  PDG+ ++L++  +K  A+ELKYG +VERHLEDGDIVLFNRQPSLHRMS
Sbjct: 420  SQKYPGANFIRYPDGSIMNLRFSARKRAADELKYGYIVERHLEDGDIVLFNRQPSLHRMS 479

Query: 1478 IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTP 1657
            IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA MLMGVQNNLCTP
Sbjct: 480  IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTP 539

Query: 1658 KNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELW 1837
            KNG ILVASTQDFLTS+FLITRKDTFYDRAAFSLMCSY+GDGM+ +DLPTPALIKPIELW
Sbjct: 540  KNGAILVASTQDFLTSAFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELW 599

Query: 1838 TGKQLFSVLVRPNAQTRVFVNLIVKERIHVKDTETMCPRDGYVYFRNSELICGQLGKVTL 2017
            TGKQLFSVLVRP+A  RV++NL V E+  VK  ETMCP DG+VYFRNSELICGQLGK TL
Sbjct: 600  TGKQLFSVLVRPHAHMRVYLNLTVLEKNCVKQKETMCPNDGFVYFRNSELICGQLGKATL 659

Query: 2018 GNGNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKM 2197
            GNGNK GLFSVLLRDYN+  AASCMNR+AKLSARWIGNHGFSIGIDDVQPGE L  +KK 
Sbjct: 660  GNGNKDGLFSVLLRDYNAHAAASCMNRIAKLSARWIGNHGFSIGIDDVQPGELLKDKKKE 719

Query: 2198 TIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRN 2377
            TI+DGY+ C   I  Y    L L+PG +AA+TLE +IT  LNEIR+    VCM+ELHWRN
Sbjct: 720  TIEDGYKACDELIHSYNKGNLELEPGCDAAQTLEAQITRKLNEIREETAAVCMQELHWRN 779

Query: 2378 SPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVA 2557
            SPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDR+LPHFP KSK PAAKGFVA
Sbjct: 780  SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKTPAAKGFVA 839

Query: 2558 NSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASG 2737
            NSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDL++YYD TVR+ASG
Sbjct: 840  NSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLAVYYDDTVRNASG 899

Query: 2738 GIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLS 2917
            G+VQF+YGDDG+DPA MEG+ GIPLNL+++Y K  ATCP     SL PS+IV ++++R+S
Sbjct: 900  GVVQFLYGDDGLDPANMEGKKGIPLNLERVYLKTKATCPSGTNASLCPSEIVKILDDRIS 959

Query: 2918 KYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQED-GQKEDSGTLENVAANISG 3094
            +YDM+P+ GCSSAFK LL DF+  R++ LR TR  L L E+  +K++S  LE++AANISG
Sbjct: 960  RYDMTPDGGCSSAFKKLLVDFIQNRISILRNTRKALGLDEEYAKKDNSDILEHIAANISG 1019

Query: 3095 ISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTL 3274
            I+ +QL+VF+ETCISRYH K++E              EPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1020 ITTQQLKVFLETCISRYHLKRIEAGAAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1079

Query: 3275 GVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQ 3454
            GVPRIKEIIN AKNISTPIITATL CDD  +SAR+VKG IEKTVLGEVA+++KIV    Q
Sbjct: 1080 GVPRIKEIINGAKNISTPIITATLECDDNVKSARIVKGCIEKTVLGEVAKSIKIVMTQRQ 1139

Query: 3455 PYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSD 3634
              I I  D  R++   ++ S +S+K +I  H +    K K + +  +G   L + P  SD
Sbjct: 1140 ASIVISLDMARIEAAQLKISADSVKESILKHLN---PKFKPKIVVDKGY-KLIVIPTESD 1195

Query: 3635 RNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQKD-KYNLLVEGTNLLAVMGTPGVDAS 3811
            R++LHFEL++LK++LP+VIVKGISTV RAVIN  KD KYNLLVEGTNLL VMGTPGVD  
Sbjct: 1196 RSKLHFELHNLKAVLPQVIVKGISTVQRAVINKSKDGKYNLLVEGTNLLGVMGTPGVDGC 1255

Query: 3812 KTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGIT 3991
            KT SNH++E+  TLGIEAAR CII EIQ TM  HGM ID RHMMLLAD+MTYKGEVLGIT
Sbjct: 1256 KTTSNHIIEVQGTLGIEAARRCIIDEIQYTMGKHGMDIDIRHMMLLADLMTYKGEVLGIT 1315

Query: 3992 RFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQ 4171
            R G+ KMK+S+LMLASFEKT++HLFNAS NGRDD+IEGVSECII+GIPMQ+GTGILKV Q
Sbjct: 1316 RTGIQKMKESVLMLASFEKTADHLFNASVNGRDDKIEGVSECIILGIPMQIGTGILKVIQ 1375

Query: 4172 RIEQLPEFKYGPDPII 4219
            R  Q+P+  Y PDPII
Sbjct: 1376 RYPQVPQLSYKPDPII 1391


>gb|PAN38835.1| hypothetical protein PAHAL_G00721 [Panicum hallii]
          Length = 1398

 Score = 1887 bits (4889), Expect = 0.0
 Identities = 957/1402 (68%), Positives = 1118/1402 (79%), Gaps = 27/1402 (1%)
 Frame = +2

Query: 95   MAWGAEKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVA 274
            MA   EKLRCTKEP+IED+G R+IKSIRF   SG +IRK AEVQVW++ +Y    +KPV 
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWSSRIY-GNDMKPVP 59

Query: 275  HGLIDSRMGPANKK---TVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCIC 445
            +GL+D RMG  +K+   +VC TC+G F++CPGHFGYL+L LPVFNVG+FN IL++LKCIC
Sbjct: 60   NGLLDMRMGLPSKRDKDSVCSTCYGPFSECPGHFGYLKLALPVFNVGFFNCILDVLKCIC 119

Query: 446  KACGRILLPEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKA 625
            K C R+LL EK+R+EFL K RNPRAD  QK+  MK VR+KCK+ + CPRC + NG V K 
Sbjct: 120  KGCSRVLLSEKDRREFLKKMRNPRADALQKSATMKKVRDKCKT-TCCPRCEYRNGVVKKG 178

Query: 626  KSQLAVAENFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELL 805
            ++ L V  +    +D   EE + AL H KEKVS   V +L P+ VL+LF++M DEDCELL
Sbjct: 179  RAGLIVIHDCSKILDGHAEELKNALQHKKEKVSTSSVRMLDPATVLSLFRRMTDEDCELL 238

Query: 806  HLGVRPENLIVTEIAIPPAPIRPSVIVGSGQ-SNEDGLTAXXXXXXXXXXXXXEDLDGAA 982
            +LG RPE LIVTEIA+PP PIRPSV+VG+ + SNED +TA             E L    
Sbjct: 239  NLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTGG 298

Query: 983  PLYNCLECWNLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGR 1162
                C +CW  LQ  VVEY+NS+AP +PES+HRGLVQRLKGK GRFR NLSGKR E+TGR
Sbjct: 299  LFNKCFDCWQQLQLQVVEYVNSDAPCLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGR 358

Query: 1163 TVISPDPNLKITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDG 1342
            TVISPDPNL+ITEVAIP+LMA+VLTYPERV+++N+EKLRQC+RNGP+KHPGANF+I PDG
Sbjct: 359  TVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANFIITPDG 418

Query: 1343 TRLHLKYVEKKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLR 1522
            TRL LKY +++  A +LK G +VERHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWRTLR
Sbjct: 419  TRLSLKYGDRRIAARDLKCGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLR 478

Query: 1523 FNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLT 1702
            FNESVCNPYNADFDGDEMNLHVPQTEEARTEA MLMGVQNNLCTPKNGEILVASTQDFLT
Sbjct: 479  FNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLT 538

Query: 1703 SSFLITRKDTFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQ 1882
            SSFL+TRKDTFYDR++F+LMCSY+GD ME+IDLPTPALIKPIELWTGKQLFSVLVRPNA+
Sbjct: 539  SSFLVTRKDTFYDRSSFTLMCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAR 598

Query: 1883 TRVFVNLIVKERIHVK----------------DTETMCPRDGYVYFRNSELICGQLGKVT 2014
            T+VF+NL VKE+I+ K                  ETMCP DGYVYFRNSEL+ GQ+GK T
Sbjct: 599  TKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSELLSGQVGKAT 658

Query: 2015 LGNGNKSGLFSVLLRDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKK 2194
            LGNGNK G++SVLLRDYNS  AASCMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+QKK
Sbjct: 659  LGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKK 718

Query: 2195 MTIDDGYRRCSSFIDLYENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWR 2374
              ID+GY++C   I L+    L L PG NAAETLE  IT VLNEIR  AG+VCM  LHWR
Sbjct: 719  KKIDEGYKQCHDLISLFAKGALALHPGCNAAETLEHRITGVLNEIRTAAGNVCMDTLHWR 778

Query: 2375 NSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFV 2554
            NSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRTLPHFPI SK PAAKGFV
Sbjct: 779  NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFV 838

Query: 2555 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSAS 2734
            ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMK LEDLS++YDQTVR+AS
Sbjct: 839  ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNAS 898

Query: 2735 GGIVQFIYGDDGMDPAKMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERL 2914
            GGI+QF+YGDDGMDPAKMEG++G PLNLDQL+ KV ATCP++  D+LSP+ I  ++ ++L
Sbjct: 899  GGIIQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPQRGPDTLSPADIRQMLEDKL 958

Query: 2915 SKYDMSPEDGCSSAFKNLLSDFLHKRVAELRKTRTRLKLQEDG-QKEDSGTLENVAANIS 3091
            +++  S + GCS  F+  L +F  KR+  L  TR  L L      K+DS   E VAANIS
Sbjct: 959  TQHGTSSDGGCSQEFEKGLREFFEKRINLLECTRRALHLDVGHVGKKDSCIEEFVAANIS 1018

Query: 3092 GISAKQLQVFMETCISRYHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVT 3271
            GISAKQLQVF++TC SRYH K +E              EPGTQMTLKTFHFAGVASMNVT
Sbjct: 1019 GISAKQLQVFLDTCFSRYHSKTIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1078

Query: 3272 LGVPRIKEIINAAKNISTPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSN 3451
            LGVPRIKEIINAAK ISTPIIT  L       SAR+VKG +EK VLGEVA  +KI+ K +
Sbjct: 1079 LGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASDIKIILKPS 1138

Query: 3452 QPYISIIFDKERLKTLHMEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVS 3631
            Q  + +  D + ++ LHM  S ++++ +I  H    KIKLK EH+ +     L+I+P  +
Sbjct: 1139 QANLVVKLDMQLIEALHMGISADTVQLSILKH---PKIKLKPEHVRVIDRAKLKIYPAGT 1195

Query: 3632 DRNRLHFELNSLKSMLPKVIVKGISTVDRAVINCQK------DKYNLLVEGTNLLAVMGT 3793
            D+++L  EL++LKSMLPKVIVKGI TV+R VI+  K      +KYNLLVEGTNLLAVMGT
Sbjct: 1196 DKSKLQLELHNLKSMLPKVIVKGIPTVERVVIDEIKKKDNTVEKYNLLVEGTNLLAVMGT 1255

Query: 3794 PGVDASKTKSNHVMEIWQTLGIEAARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKG 3973
            PGVDA  TKSNH+ME+  TLGIEAAR  II EIQ TMKSHGM+ID RHMMLLAD+MTYKG
Sbjct: 1256 PGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKG 1315

Query: 3974 EVLGITRFGMTKMKDSILMLASFEKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTG 4153
            EVLGITR+G+ KMK S+LMLASFEKTSEHLFNAS++GR+D+IEGVSECIIMGIPMQLGTG
Sbjct: 1316 EVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTG 1375

Query: 4154 ILKVRQRIEQLPEFKYGPDPII 4219
            ILKVRQR+++LPEFKY PDPI+
Sbjct: 1376 ILKVRQRLDRLPEFKYQPDPIL 1397


>ref|XP_020575429.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Phalaenopsis
            equestris]
 ref|XP_020575430.1| DNA-directed RNA polymerase III subunit 1 isoform X1 [Phalaenopsis
            equestris]
          Length = 1379

 Score = 1884 bits (4881), Expect = 0.0
 Identities = 954/1379 (69%), Positives = 1096/1379 (79%), Gaps = 9/1379 (0%)
 Frame = +2

Query: 110  EKLRCTKEPYIEDIGPRKIKSIRFDAFSGEDIRKVAEVQVWNNGLYDATAVKPVAHGLID 289
            EKLRCTKEPYIE  G  +I++I F   SG++IR+ AEVQVW + +YD   VKPV +GL+D
Sbjct: 6    EKLRCTKEPYIEVTGHHRIENIHFSVHSGDEIRRHAEVQVWKDSIYDIN-VKPVPNGLLD 64

Query: 290  SRMGPANKKTVCGTCHGGFTDCPGHFGYLRLTLPVFNVGYFNSILNILKCICKACGRILL 469
             RMGP N+   C TCHG F +CPGHFG L LTLPVFN+GYFNSILNILKCICKACGRILL
Sbjct: 65   LRMGPPNRNFTCATCHGTFAECPGHFGCLELTLPVFNIGYFNSILNILKCICKACGRILL 124

Query: 470  PEKERKEFLAKTRNPRADVHQKNNIMKNVRNKCKSFSRCPRCGHINGNVSKAKSQLAVAE 649
             EKERK FL   R PRAD  QK++++K +R KC SF  C  CG+ NG V K  S L + E
Sbjct: 125  SEKERKFFLRIIRKPRADPTQKDHLLKKIREKC-SF-HCFHCGYKNGVVKKLGSSLTIVE 182

Query: 650  NFRTTVDESLEECRAALSHLKEKVSFQPVHLLTPSKVLALFKKMPDEDCELLHLGVRPEN 829
            +   T+D    E R ALSH+K+  SFQ ++ L P KVL+LFK+M  EDCELL++  RPE 
Sbjct: 183  DLTKTIDGRAYEIRVALSHMKDNASFQSINALRPLKVLSLFKRMLVEDCELLNMKDRPEK 242

Query: 830  LIVTEIAIPPAPIRPSVIVGSGQSNEDGLTAXXXXXXXXXXXXXEDLDGAAPLYNCLECW 1009
             I+T+IA+PP+PIRPS ++ S  SNED +TA             EDL+GAAPL+ CLECW
Sbjct: 243  FIITDIAVPPSPIRPSALMDSEMSNEDDITAILKGIINTNSILREDLEGAAPLFKCLECW 302

Query: 1010 NLLQGFVVEYINSEAPSVPESKHRGLVQRLKGKQGRFRCNLSGKRVEFTGRTVISPDPNL 1189
            +LLQ  V EYINSEAPSVP++K+RGL+QRLKGKQGRFR NLSGKRVEFTGRTVISPDPNL
Sbjct: 303  DLLQVRVAEYINSEAPSVPDNKNRGLIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNL 362

Query: 1190 KITEVAIPILMAQVLTYPERVTHHNIEKLRQCVRNGPFKHPGANFVILPDGTRLHLKYVE 1369
            KITEV IP LMAQ+LTYPERV+ HNIEKLRQ VRNG  K+PGANFV L  G+ + LKY  
Sbjct: 363  KITEVGIPTLMAQILTYPERVSCHNIEKLRQRVRNGRSKYPGANFVALSSGSTMDLKYGA 422

Query: 1370 KKNVANELKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPY 1549
            +KN+AN LKYG +V+RHLEDGD+VLFNRQPSLHRMS+M HRA+IMPWRTLRFNESVCNPY
Sbjct: 423  RKNIANNLKYGDIVQRHLEDGDVVLFNRQPSLHRMSLMCHRAKIMPWRTLRFNESVCNPY 482

Query: 1550 NADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD 1729
            NADFDGDEMNLHVPQ EEARTEA ML+GVQNNLCTPKNGEILVASTQDFLTSSFLITRKD
Sbjct: 483  NADFDGDEMNLHVPQIEEARTEALMLLGVQNNLCTPKNGEILVASTQDFLTSSFLITRKD 542

Query: 1730 TFYDRAAFSLMCSYIGDGMESIDLPTPALIKPIELWTGKQLFSVLVRPNAQTRVFVNLIV 1909
            TFYDRA F+LMCSY+GDGMESIDLP PALIKP+ELWTGKQLF+VLVRPNA TRVF+NL V
Sbjct: 543  TFYDRANFALMCSYMGDGMESIDLPAPALIKPVELWTGKQLFNVLVRPNASTRVFLNLTV 602

Query: 1910 KERIHVKD---TETMCPRDGYVYFRNSELICGQLGKVTLGNGNKSGLFSVLLRDYNSDVA 2080
             E+   K     ETMCPRDG+VYFRNSELI GQLGK TLGNG K GLFSVLLRDYN+  A
Sbjct: 603  IEKGFSKPQNLCETMCPRDGFVYFRNSELISGQLGKATLGNGGKDGLFSVLLRDYNAYAA 662

Query: 2081 ASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDG------YRRCSSFIDL 2242
             +CMNRLAKLSARWIGNHGFSIGIDDVQPGERLN+QKK TIDDG         C  FI  
Sbjct: 663  VNCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNRQKKRTIDDGEXXXXXXXXCRDFITK 722

Query: 2243 YENRKLTLKPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGSAI 2422
            Y   +LTL+ G +AA+TLE+EI  VLN+IR  AG+VCM ELHWRNSPLIMSQCGSKGS I
Sbjct: 723  YNKGELTLQTGCDAAQTLELEIYNVLNKIRSAAGNVCMDELHWRNSPLIMSQCGSKGSPI 782

Query: 2423 NISQMIACVGQQSVGGRRAPNGFIDRTLPHFPIKSKFPAAKGFVANSFYTGLTATEFFFH 2602
            NISQMIA VGQQSVGGRRAPNGFIDRTLPHFPI SK P+AKGFVANSFYTGLTATEFFFH
Sbjct: 783  NISQMIALVGQQSVGGRRAPNGFIDRTLPHFPINSKTPSAKGFVANSFYTGLTATEFFFH 842

Query: 2603 TMGGREGLVDTAVKTAETGYMSRRLMKALEDLSLYYDQTVRSASGGIVQFIYGDDGMDPA 2782
            TM GREGLVDTAVKTAETGYMSRRL+K +ED+SL+YD TVR A GGIVQ +YGDDG+DPA
Sbjct: 843  TMAGREGLVDTAVKTAETGYMSRRLVKGMEDVSLHYDITVRDACGGIVQLLYGDDGLDPA 902

Query: 2783 KMEGENGIPLNLDQLYKKVLATCPRKPQDSLSPSKIVDLVNERLSKYDMSPEDGCSSAFK 2962
            KMEG+ G PLN DQLY KV+ATCP +  D LSP++I+  ++ RL+  D+S E  CS  FK
Sbjct: 903  KMEGKEGNPLNFDQLYMKVMATCPHRDNDILSPAEILQTLHRRLACCDVSSEGCCSLEFK 962

Query: 2963 NLLSDFLHKRVAELRKTRTRLKLQEDGQKEDSGTLENVAANISGISAKQLQVFMETCISR 3142
              LSDF+HK +   +KTR  L+L E+         ENVA  ISGISAKQL+VF+ETCISR
Sbjct: 963  QKLSDFIHKCINRYQKTRQALQLDENSINGGCCKTENVATRISGISAKQLEVFLETCISR 1022

Query: 3143 YHKKKLEXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNIS 3322
            YH KKLE              EPGTQMTLKTFHFAGVASMN+TLGVPRIKEIINA+KNIS
Sbjct: 1023 YHLKKLEAGAAIGVIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNIS 1082

Query: 3323 TPIITATLFCDDREESARLVKGEIEKTVLGEVAEAVKIVFKSNQPYISIIFDKERLKTLH 3502
            TP+I   L       SAR VKG +EKT LGEVA  +KIV K +Q YIS++ D ER++ L 
Sbjct: 1083 TPMIKTQLLLSSEALSARTVKGCVEKTALGEVAICIKIVLKPSQSYISVVLDMERIEALQ 1142

Query: 3503 MEDSFESIKNAIADHKSIKKIKLKREHITIRGMGNLRIFPPVSDRNRLHFELNSLKSMLP 3682
            M+ + ES++ +I +H    KI LK  H+   G   LRI+ P +D+N++   L+SL ++LP
Sbjct: 1143 MKITSESVRKSILNH---PKIGLKSNHVHTVGSKKLRIYSPAADKNKIQLSLHSLLTLLP 1199

Query: 3683 KVIVKGISTVDRAVINCQKDKYNLLVEGTNLLAVMGTPGVDASKTKSNHVMEIWQTLGIE 3862
            KVIVKGI TV RAVI   K  Y+L VEGTN LAVMGTPGVDASKT SNHV+E+ QTLGIE
Sbjct: 1200 KVIVKGIPTVKRAVIKNDKGLYSLFVEGTNYLAVMGTPGVDASKTTSNHVIEVRQTLGIE 1259

Query: 3863 AARHCIISEIQDTMKSHGMSIDARHMMLLADVMTYKGEVLGITRFGMTKMKDSILMLASF 4042
            AAR  II+EI+ TM+ HGMSID RHM LLAD+MTYKGEVLG+TR+G+TKMK S+LMLASF
Sbjct: 1260 AARQTIINEIKFTMEGHGMSIDIRHMKLLADLMTYKGEVLGMTRYGLTKMKSSVLMLASF 1319

Query: 4043 EKTSEHLFNASFNGRDDQIEGVSECIIMGIPMQLGTGILKVRQRIEQLPEFKYGPDPII 4219
            EKTS+HLFN S++GRDD I+GVSECIIMGIPM+LGTGILK+RQR+E+LPE KYGPDPII
Sbjct: 1320 EKTSDHLFNGSYSGRDDHIDGVSECIIMGIPMRLGTGILKLRQRVEELPELKYGPDPII 1378