BLASTX nr result
ID: Ophiopogon27_contig00014150
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00014150
(824 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK56286.1| uncharacterized protein A4U43_C10F6140 [Asparagus... 247 2e-78
ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207... 231 2e-65
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 200 1e-54
gb|ONK60149.1| uncharacterized protein A4U43_C08F14900 [Asparagu... 188 1e-53
gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposo... 184 1e-51
gb|ONK59787.1| uncharacterized protein A4U43_C08F10690 [Asparagu... 171 9e-49
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 178 5e-47
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 168 1e-43
gb|PNX85475.1| copia protein (gag-int-pol protein), partial [Tri... 147 5e-37
gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica] 148 1e-36
gb|AMY96445.1| gag/pol protein [Momordica dioica] 144 5e-35
gb|PKI60930.1| hypothetical protein CRG98_018676 [Punica granatum] 134 4e-34
gb|PKI48303.1| hypothetical protein CRG98_031305, partial [Punic... 132 2e-33
dbj|BAA22288.1| polyprotein [Oryza australiensis] 139 2e-33
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 137 6e-33
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 137 6e-33
gb|PON81075.1| Zinc finger, CCHC-type, partial [Trema orientalis] 130 8e-33
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 137 1e-32
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 135 4e-32
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 134 1e-31
>gb|ONK56286.1| uncharacterized protein A4U43_C10F6140 [Asparagus officinalis]
Length = 256
Score = 247 bits (630), Expect = 2e-78
Identities = 124/193 (64%), Positives = 146/193 (75%), Gaps = 6/193 (3%)
Frame = +1
Query: 205 PKRQTQTXXXXXXXXXXXXXPTGG---VKKKKASGGEKPRGKCFKCGETGHWKRNCPKSL 375
P +Q QT PTGG K K + +GKCF+CGETGHWKRNCPK L
Sbjct: 64 PNKQKQTGKKKPKSPKVKQGPTGGGVGKVKGKTKASKAGKGKCFQCGETGHWKRNCPKVL 123
Query: 376 ---KTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRELDDGEISFSLGTE 546
+TG T++ VIEVS+I DTS+TWC+DSGATHHICNSLQ FQVSR+L++G+IS SLG+E
Sbjct: 124 AKKQTGMTDIQVIEVSFIVDTSSTWCLDSGATHHICNSLQRFQVSRQLEEGKISLSLGSE 183
Query: 547 ARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYTCMFGQDLVIKIN 726
A+V AVGVIRL F N +LILNNALYVP+IRRNLISVP LAS GYTC+FG+D+VI+IN
Sbjct: 184 AKVLTVAVGVIRLCFQNNNVLILNNALYVPSIRRNLISVPCLASCGYTCLFGRDVVIEIN 243
Query: 727 GNFVCSGKLSNGL 765
GNFVCSG LS GL
Sbjct: 244 GNFVCSGILSYGL 256
>ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
carota subsp. sativus]
Length = 3860
Score = 231 bits (589), Expect = 2e-65
Identities = 119/264 (45%), Positives = 167/264 (63%), Gaps = 3/264 (1%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
GAE+DG++Q+D+IL SLP+S++QF+LNY +N + Y+L+ L++ L+A E + + V
Sbjct: 304 GAELDGETQIDIILMSLPKSFEQFRLNYNMNKRQYSLAELLTELQAAEGLFRQSVQVNVA 363
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGHWKRN 360
EK SS S PK + GGVKK P+GKC++C ++GHWK++
Sbjct: 364 EKGSS-SKPKGNKKKKKAQTQKAVKAVGVQGGVKK--------PKGKCYRCKQSGHWKKD 414
Query: 361 CPKSLKTGKTEM---LVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRELDDGEISF 531
CP KT T M LV E A +++TWC+D+GAT H+CNS+QGFQ SR L DGEI
Sbjct: 415 CPLPKKTNDTGMSLSLVTETFVAAISTSTWCVDTGATDHVCNSMQGFQQSRMLRDGEIYV 474
Query: 532 SLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYTCMFGQDL 711
+G +V+ AVGVI LSF ++IL+LNN LYVP+ RRNLISV LA GY +++
Sbjct: 475 FMGDATKVAVVAVGVIHLSFGSDRILVLNNCLYVPSFRRNLISVSKLAMDGYNVCLDRNV 534
Query: 712 VIKINGNFVCSGKLSNGLYFVNPT 783
I +N +CSG L + LY +NP+
Sbjct: 535 SIMMNKRIICSGTLQDNLYIINPS 558
Score = 231 bits (589), Expect = 2e-65
Identities = 119/264 (45%), Positives = 167/264 (63%), Gaps = 3/264 (1%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
GAE+DG++Q+D+IL SLP+S++QF+LNY +N + Y+L+ L++ L+A E + + V
Sbjct: 1519 GAELDGETQIDIILMSLPKSFEQFRLNYNMNKRQYSLAELLTELQAAEGLFRQSVQVNVA 1578
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGHWKRN 360
EK SS S PK + GGVKK P+GKC++C ++GHWK++
Sbjct: 1579 EKGSS-SKPKGNKKKKKAQTQKAVKAVGVQGGVKK--------PKGKCYRCKQSGHWKKD 1629
Query: 361 CPKSLKTGKTEM---LVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRELDDGEISF 531
CP KT T M LV E A +++TWC+D+GAT H+CNS+QGFQ SR L DGEI
Sbjct: 1630 CPLPKKTNDTGMSLSLVTETFVAAISTSTWCVDTGATDHVCNSMQGFQQSRMLRDGEIYV 1689
Query: 532 SLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYTCMFGQDL 711
+G +V+ AVGVI LSF ++IL+LNN LYVP+ RRNLISV LA GY +++
Sbjct: 1690 FMGDATKVAVVAVGVIHLSFGSDRILVLNNCLYVPSFRRNLISVSKLAMDGYNVCLDRNV 1749
Query: 712 VIKINGNFVCSGKLSNGLYFVNPT 783
I +N +CSG L + LY +NP+
Sbjct: 1750 SIMMNKRIICSGTLQDNLYIINPS 1773
Score = 231 bits (589), Expect = 2e-65
Identities = 119/264 (45%), Positives = 167/264 (63%), Gaps = 3/264 (1%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
GAE+DG++Q+D+IL SLP+S++QF+LNY +N + Y+L+ L++ L+A E + + V
Sbjct: 2734 GAELDGETQIDIILMSLPKSFEQFRLNYNMNKRQYSLAELLTELQAAEGLFRQSVQVNVA 2793
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGHWKRN 360
EK SS S PK + GGVKK P+GKC++C ++GHWK++
Sbjct: 2794 EKGSS-SKPKGNKKKKKAQTQKAVKAVGVQGGVKK--------PKGKCYRCKQSGHWKKD 2844
Query: 361 CPKSLKTGKTEM---LVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRELDDGEISF 531
CP KT T M LV E A +++TWC+D+GAT H+CNS+QGFQ SR L DGEI
Sbjct: 2845 CPLPKKTNDTGMSLSLVTETFVAAISTSTWCVDTGATDHVCNSMQGFQQSRMLRDGEIYV 2904
Query: 532 SLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYTCMFGQDL 711
+G +V+ AVGVI LSF ++IL+LNN LYVP+ RRNLISV LA GY +++
Sbjct: 2905 FMGDATKVAVVAVGVIHLSFGSDRILVLNNCLYVPSFRRNLISVSKLAMDGYNVCLDRNV 2964
Query: 712 VIKINGNFVCSGKLSNGLYFVNPT 783
I +N +CSG L + LY +NP+
Sbjct: 2965 SIMMNKRIICSGTLQDNLYIINPS 2988
Score = 73.6 bits (179), Expect = 7e-11
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 1/222 (0%)
Frame = +1
Query: 4 AEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNVE 183
AE DG++Q+D+IL SL +S +QF LN +N + Y+L+ L++ L+ +P S + +
Sbjct: 26 AEHDGETQIDIILMSLSKSIEQFCLNCNMNKRQYSLAKLLTELQV------LPRSQKGAK 79
Query: 184 KASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGG-EKPRGKCFKCGETGHWKRN 360
K K QTQ VK + GG +KP+GKCF+C ++
Sbjct: 80 KKK-----KAQTQK----------------AVKAVRVQGGMKKPKGKCFRCKQS------ 112
Query: 361 CPKSLKTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRELDDGEISFSLG 540
D+GAT H+CNS+QGFQ+S L D E+
Sbjct: 113 -----------------------------DTGATDHVCNSMQGFQLSGMLRDEELVVGTN 143
Query: 541 TEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVP 666
E V+++ P + + N V ++ +P
Sbjct: 144 NEP--------VVQVEQPQQNVRPVTNTAPVSRRSGKVVQLP 177
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 200 bits (509), Expect = 1e-54
Identities = 111/285 (38%), Positives = 161/285 (56%), Gaps = 15/285 (5%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVK-----VPH 165
GAE+D +Q++M+L +LP S+ QF+LNY +N D+TLS L++ L A + I+K V
Sbjct: 469 GAEVDKATQIEMVLNTLPPSFQQFRLNYNMNKMDFTLSKLLNELVAAQTIIKQGAAPVVL 528
Query: 166 SVQNVEKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETG 345
+++ V + K G K++ GV KK P+GKCF C +
Sbjct: 529 NIERVFSSVQKKGKKKKNVKPNNNGAANG-----VNGVVKK-------PKGKCFHCKQPS 576
Query: 346 HWKRNCP-----KSLKTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSREL 510
HWK CP K T +LV+E T++ WC+D GAT+H+CNSLQGFQ +R+L
Sbjct: 577 HWKLQCPTWLAKKKQGTSPFHLLVVETCLAVLTTHQWCVDLGATNHVCNSLQGFQETRQL 636
Query: 511 DDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYT 690
GE++ LG + V+ AVG I L+F N+ L L N LYVP+IRRNLI + SL+ GY+
Sbjct: 637 SKGEVNIFLGNGSEVAVLAVGNIALNFKNNRTLFLKNVLYVPSIRRNLIPISSLSKNGYS 696
Query: 691 CMFGQ----DLVIKINGNFVCSGKLSNGLYFVNPT-VMEVNNSEI 810
F + +VIK +CSG L + LY + T +++ NSE+
Sbjct: 697 VCFNEFYDDSVVIKFREQMICSGSLIDSLYILKVTPELQLTNSEV 741
>gb|ONK60149.1| uncharacterized protein A4U43_C08F14900 [Asparagus officinalis]
Length = 416
Score = 188 bits (478), Expect = 1e-53
Identities = 101/152 (66%), Positives = 113/152 (74%), Gaps = 7/152 (4%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
GAEIDG+SQVDMILESL ESYDQFKLNYVLN KDY+LS +MSAL+ TE I+K S+QN
Sbjct: 164 GAEIDGESQVDMILESLLESYDQFKLNYVLNHKDYSLSEIMSALQVTEGIIKPTPSIQNT 223
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXP-TGGV---KKKKASGGEKPRGKCFKCGETGH 348
EK S K+GPKRQ Q P TGGV K K +GGEKP+GKCF CGETGH
Sbjct: 224 EKTSFKAGPKRQKQFKKKKPKHPKGKTGPATGGVGKGKGKSGNGGEKPKGKCFLCGETGH 283
Query: 349 WKRNCPKSL---KTGKTEMLVIEVSYIADTSN 435
WK+NCPK L KTGKTE+ VIEVS+IADTSN
Sbjct: 284 WKKNCPKFLARNKTGKTELQVIEVSFIADTSN 315
>gb|EXB35423.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 443
Score = 184 bits (466), Expect = 1e-51
Identities = 110/281 (39%), Positives = 152/281 (54%), Gaps = 9/281 (3%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
GA ID +QV +ILESL + +F N+V+N K L+ LM+ L+ E K NV
Sbjct: 59 GARIDKATQVGIILESLSPDFHEFVNNFVMNKKKSNLNELMNDLQTFESTNKRRGGEANV 118
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGG-EKPRGKCFKCGETGHWKR 357
A KR+ + K KK G +KP+GKCF C GHWKR
Sbjct: 119 VVAGGSGKSKRKDRNQGKGEKGKNR--------KPKKTKGPIQKPKGKCFHCNGEGHWKR 170
Query: 358 NCPKSLKT-------GKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRELDD 516
NC K L+ GK+++ V+E+ + ++TW IDSGAT+H+C SLQ EL D
Sbjct: 171 NCHKYLEELKKKKEQGKSDLPVLEICLVEGDTSTWIIDSGATNHVCFSLQSLSSYTELAD 230
Query: 517 GEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYTCM 696
G+ +G ARV+A AVG +RL F NK L+LNN ++P+IRRNLIS+ L Q +
Sbjct: 231 GDYMIKVGNGARVTAKAVGEVRLHFRENKFLVLNNVYFIPDIRRNLISMSKLFEQFFKVY 290
Query: 697 FGQDLV-IKINGNFVCSGKLSNGLYFVNPTVMEVNNSEIVK 816
F D V I NG + SG+L +GLY + P + N+E+ +
Sbjct: 291 FVNDFVHISRNGLNIYSGRLDDGLYCIKPIPNSLLNTEMFR 331
>gb|ONK59787.1| uncharacterized protein A4U43_C08F10690 [Asparagus officinalis]
Length = 239
Score = 171 bits (432), Expect = 9e-49
Identities = 89/134 (66%), Positives = 98/134 (73%), Gaps = 4/134 (2%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
GAEIDG+SQVDMILESLPESYDQFKLNYVLN KDY+LS LMSAL+ATE I+K S+QN
Sbjct: 70 GAEIDGESQVDMILESLPESYDQFKLNYVLNHKDYSLSELMSALQATEGIIKPTPSIQNT 129
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXP-TGGV---KKKKASGGEKPRGKCFKCGETGH 348
EK S K+GPKRQ Q P TGGV K K +GGEKP+GKCF CGETGH
Sbjct: 130 EKTSFKAGPKRQKQFKKKKPKHPKGKTGPATGGVGKGKGKSGNGGEKPKGKCFLCGETGH 189
Query: 349 WKRNCPKSLKTGKT 390
WK+NCPK L KT
Sbjct: 190 WKKNCPKFLARNKT 203
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 178 bits (451), Expect = 5e-47
Identities = 103/281 (36%), Positives = 159/281 (56%), Gaps = 9/281 (3%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
GA+ID ++QV MILE+L S+ QF+ NY++N K L+ L++ L++ E ++ N+
Sbjct: 69 GAKIDEKTQVGMILETLSPSFLQFRTNYIMNHKKCNLTELLNELQSYETLIDDKGGKANI 128
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGE-KPRGKCFKCGETGHWKR 357
+A++ G ++ ++KKK E KP+ KCF C + HWKR
Sbjct: 129 AEANAVVGKASSSRNKKKRNVRNQKDKKK---IQKKKRKVVELKPKEKCFYCNQDDHWKR 185
Query: 358 NCPKSL-------KTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRELDD 516
NC K L K GK ++LV+E + + ++ IDSGA++H+C SL+ + S++L++
Sbjct: 186 NCKKYLDELKQKKKQGKLDLLVMETCLVENDFSSLIIDSGASNHVCISLKMLESSKDLEE 245
Query: 517 GEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYTCM 696
G +G+ ARVSA VG + LSF NK L+L+N ++P+ +RNLISV L Q
Sbjct: 246 GAFMMRVGSGARVSATTVGTVXLSFANNKYLLLHNVYFIPDFKRNLISVSKLHEQFIXVS 305
Query: 697 FGQDLV-IKINGNFVCSGKLSNGLYFVNPTVMEVNNSEIVK 816
F D V I NG +CSG + NG+YFV P + +E+ K
Sbjct: 306 FDIDSVSIYKNGMNICSGYVDNGIYFVKPIFNNLLQTEMFK 346
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 168 bits (426), Expect = 1e-43
Identities = 101/242 (41%), Positives = 136/242 (56%), Gaps = 15/242 (6%)
Frame = +1
Query: 130 LKATEEIVKVPHS--VQNVEKASS---KSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKA 294
L A E I+K + V N+E+ASS K G K++ T GV
Sbjct: 160 LVAAETIIKQGATPVVLNIERASSSVQKKGKKKKN--------VKLNNNGATNGVNGVV- 210
Query: 295 SGGEKPRGKCFKCGETGHWKRNCP-----KSLKTGKTEMLVIEVSYIADTSNTWCIDSGA 459
+KP+GKCF C + GHWK CP K T +LV+E T++ WC+DSGA
Sbjct: 211 ---KKPKGKCFHCKQPGHWKLQCPTWLAKKKQGTSPFHLLVVETCLAVLTTHQWCVDSGA 267
Query: 460 THHICNSLQGFQVSRELDDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPN 639
T+H+CNSLQGFQ +R+L GE++ LG V+ AVG I L+F N+IL L N LYVP+
Sbjct: 268 TNHVCNSLQGFQETRQLSKGEVNIFLGDGTEVAVLAVGNIALNFKNNRILSLKNVLYVPS 327
Query: 640 IRRNLISVPSLASQGYTCMFGQ----DLVIKINGNFVCSGKLSNGLYFVNPT-VMEVNNS 804
IRRNLISV SL+ GY+ F + +VIK +CSG L +GLY + T +++ NS
Sbjct: 328 IRRNLISVSSLSKNGYSVCFNEFYDDSVVIKFREQIICSGSLIDGLYILKVTPELQLTNS 387
Query: 805 EI 810
E+
Sbjct: 388 EV 389
>gb|PNX85475.1| copia protein (gag-int-pol protein), partial [Trifolium pratense]
Length = 540
Score = 147 bits (371), Expect = 5e-37
Identities = 95/265 (35%), Positives = 135/265 (50%), Gaps = 9/265 (3%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVP-HSVQN 177
G ++ + +D+IL+SLPES+ QF +N+++ND D +L L + L+ E+ +K ++
Sbjct: 73 GLPLERELAIDLILQSLPESFSQFVMNFLMNDMDKSLPQLATMLRTAEKNMKGRGKTILM 132
Query: 178 VEKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGHWKR 357
V K K+ T+ K K GG GKCF CG+TGHWKR
Sbjct: 133 VNNGKPKWQQKKPTKPKGNGKGKAVAKP----STKALKPIGGVAKEGKCFHCGKTGHWKR 188
Query: 358 NCPKSLKTGKTEML--------VIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRELD 513
NCPK L+ K + VIE++ TS +W +D+G HIC ++Q SR L
Sbjct: 189 NCPKYLEDKKNGNVASTSSGINVIEINM--STSTSWVLDTGCGSHICTNVQDLGTSRALA 246
Query: 514 DGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYTC 693
GE+ +G A+V+A AVG L+ P I+ L N YVP I RN+ISV L G++
Sbjct: 247 KGEVDLRVGNGAKVAALAVGTYDLTLPSGLIIQLLNCYYVPAISRNIISVSCLDKCGFS- 305
Query: 694 MFGQDLVIKINGNFVCSGKLSNGLY 768
+IK N CS L N LY
Sbjct: 306 -----FIIK---NKCCSIYLDNILY 322
>gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]
Length = 1292
Score = 148 bits (374), Expect = 1e-36
Identities = 101/290 (34%), Positives = 147/290 (50%), Gaps = 16/290 (5%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIV--KVPHSVQ 174
G ID +QV IL+SLP+S+ F+ N LN ++ L+ L++ L+ + + K
Sbjct: 146 GGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEFNLTTLLNELQRFQNLTLSKGKEVEA 205
Query: 175 NVEKASSK----SGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGET 342
NV K S K + P KK A +GKCF C +
Sbjct: 206 NVAVTKRKFIRGSSSKNKVGPSKAQMKKKGKGKAPNTSKVKKNAD-----KGKCFHCNQD 260
Query: 343 GHWKRNCPKSLKT--------GKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQV 498
GHWKRNCPK L GK ++LV+E + ++TW +DSGAT+HIC S Q
Sbjct: 261 GHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVECDASTWILDSGATNHICFSFQETSS 320
Query: 499 SRELDDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLAS 678
++L +GEI+ +GT VSA AVG + L F ++ LIL + LYVP ++RNLIS+ +
Sbjct: 321 WKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQ-DRYLILKDVLYVPLMKRNLISIACILE 379
Query: 679 QGYTCMFG-QDLVIKINGNFVCSGKLSNGLYFVNPT-VMEVNNSEIVKSV 822
YT F ++ I G +CS N LY + PT V N+E+ +++
Sbjct: 380 HIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTRANVVLNTEMFRTL 429
>gb|AMY96445.1| gag/pol protein [Momordica dioica]
Length = 1313
Score = 144 bits (362), Expect = 5e-35
Identities = 91/276 (32%), Positives = 132/276 (47%), Gaps = 15/276 (5%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQN- 177
G ID + V IL+SLP+SY F LN +N + + L + L+ + + N
Sbjct: 147 GGPIDEANAVSFILQSLPKSYKGFLLNASMNKMNKSPGELFNELQRFQNLTLSKEVEANM 206
Query: 178 VEKASSK-----SGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGET 342
V K ++K K+ + G KK G +GKCF C E
Sbjct: 207 VNKVTAKRFKRNDKGKKGSSKNKVGPDEIKMKKKGKGKAAKKGKKGSAADKGKCFHCNEM 266
Query: 343 GHWKRNCPKSLK--------TGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQV 498
GHWKRNCPK L +GK ++LVI+V + S+ W D+G+ HICNS Q +
Sbjct: 267 GHWKRNCPKYLADKKAEKATSGKYDLLVIDVCLVECDSSAWVFDTGSVAHICNSKQETRN 326
Query: 499 SRELDDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLAS 678
R L +GEI+ +G ++V A AVG + L F ++ LNN VP ++RNLIS+ +
Sbjct: 327 KRRLKEGEITMRVGNGSKVDAEAVGDLTLFFQDRYVMNLNNCYLVPLMKRNLISIACILE 386
Query: 679 QGYTCMFG-QDLVIKINGNFVCSGKLSNGLYFVNPT 783
YT F ++ I G +C + G Y + PT
Sbjct: 387 HIYTISFEVNEVFILCKGIQICHAPIVRGFYKLRPT 422
>gb|PKI60930.1| hypothetical protein CRG98_018676 [Punica granatum]
Length = 293
Score = 134 bits (338), Expect = 4e-34
Identities = 90/279 (32%), Positives = 136/279 (48%), Gaps = 20/279 (7%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
G + + D+IL+SLP SY QF +NY +ND + L L+ L+ TE+ + V V
Sbjct: 8 GFPLGQELATDLILQSLPSSYSQFVMNYNMNDYNKLLPELLGMLRTTEQDISKETLVLMV 67
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKAS----GGEKPRGK------CFK 330
K K++ G K K AS G KP+ K CF
Sbjct: 68 HGTKKKGKGKKK-------------------GKKAKGASKYDSGAFKPKAKVAKDDCCFH 108
Query: 331 CGETGHWKRNCP---------KSLKTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSL 483
CG +GHWKRNC K +T + + VIE++ ++ S +W +D+G HIC ++
Sbjct: 109 CGNSGHWKRNCKVYLEEFKKNKGSETSTSGIHVIEIN-VSTASTSWVLDTGCGAHICGNV 167
Query: 484 QGFQVSRELDDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISV 663
Q + SR L GE+ +G A+V A +G LS P +L L++ YV I RN+IS+
Sbjct: 168 QDLRNSRSLAKGEVDLLVGNGAKVVALTIGTYHLSLPNGLVLDLDDCYYVSAISRNIISI 227
Query: 664 PSLASQG-YTCMFGQDLVIKINGNFVCSGKLSNGLYFVN 777
L +G Y + + + ++ F S +LSNGLY ++
Sbjct: 228 SCLDKKGFYFTIKNKRCSMFMDDVFYGSARLSNGLYVLD 266
>gb|PKI48303.1| hypothetical protein CRG98_031305, partial [Punica granatum]
Length = 254
Score = 132 bits (331), Expect = 2e-33
Identities = 83/248 (33%), Positives = 124/248 (50%), Gaps = 19/248 (7%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
G + + ++IL+SLP SY+QF +NY +ND + L L+ L+ TE+ + V V
Sbjct: 12 GFPLGQELATNLILQSLPNSYNQFVMNYNMNDYNKPLPELLGMLRTTEQDISKGTPVLMV 71
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKAS----GGEKPRGK------CFK 330
+ K K++ G K K AS G KP+ K CF
Sbjct: 72 QGTKKKGKGKKK-------------------GKKAKGASQYDSGALKPKAKVTKDDYCFH 112
Query: 331 CGETGHWKRNCP---------KSLKTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSL 483
CG +GHWKRNC K +T + + VIE++ ++ S +W +D+G HIC ++
Sbjct: 113 CGNSGHWKRNCKIYLEELKKKKGSETSTSGIHVIEIN-VSTASTSWVLDTGCGAHICGNV 171
Query: 484 QGFQVSRELDDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISV 663
Q + SR L GE+ +G ARV+A VG LS P +L L++ YVP I RN+IS+
Sbjct: 172 QDLRNSRSLAKGEVDLRVGNGARVAALTVGTYHLSLPTGLVLDLDDCYYVPAISRNIISI 231
Query: 664 PSLASQGY 687
L +G+
Sbjct: 232 SCLDKKGF 239
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 139 bits (350), Expect = 2e-33
Identities = 90/277 (32%), Positives = 130/277 (46%), Gaps = 10/277 (3%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEE-IVKVPHSVQN 177
G + + D+IL+SLP S++ F LNY +N+ D TL+ L LK EE I K H V
Sbjct: 152 GFPLSQELATDVILQSLPPSFEPFILNYHMNNMDRTLAELHGMLKTVEESIQKNGHHVMM 211
Query: 178 VEKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGHWKR 357
++ A K K+ + KK G CF C ETGHWKR
Sbjct: 212 MQNAKRKPPVKK-----LCTKRKLTPDEIASASNAKKGKKGSAASDAVCFYCKETGHWKR 266
Query: 358 NCPKSLK--------TGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRELD 513
NC K ++ T + + VI+++ +++W D+G+ H C SLQG + SR L
Sbjct: 267 NCKKYMEDLKKKQSTTSASGINVIDINLATSPTDSWVFDTGSVAHSCKSLQGMRRSRGLR 326
Query: 514 DGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYTC 693
GE++ +G A V+ AVG + L P +L LNN VP + +N+IS L ++GY
Sbjct: 327 RGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYCVPTLCQNVISASCLQAEGYDF 386
Query: 694 -MFGQDLVIKINGNFVCSGKLSNGLYFVNPTVMEVNN 801
I + F L NGLY +N + N
Sbjct: 387 RSMNNGCSIYLRDMFYFHAPLVNGLYVLNLEASPIYN 423
>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 137 bits (346), Expect = 6e-33
Identities = 89/274 (32%), Positives = 134/274 (48%), Gaps = 15/274 (5%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHS---V 171
G + + D+IL+SLP S++ F +N+ +N+ + TL+ L LK EE +K + V
Sbjct: 243 GFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMV 302
Query: 172 QNVEKASSK-SGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGH 348
+ K ++K SG KR+ + T K K G +CF ETGH
Sbjct: 303 MHKRKPNNKKSGQKRKLNSDEITS---------TSNSKTKVQKTGPAKDAECFFYKETGH 353
Query: 349 WKRNCPKSL----------KTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQV 498
WKRNC K L K+ + + VIE++ ++++W D+G+ HIC SLQG +
Sbjct: 354 WKRNCKKYLEQLKQKQQDGKSSTSGINVIEINLATSSTDSWVFDTGSVAHICKSLQGLKR 413
Query: 499 SRELDDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLAS 678
SR L G + +G RV+ AVG + LS P +L LNN +P + +N+IS L +
Sbjct: 414 SRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCKNVISASCLQA 473
Query: 679 QGYTC-MFGQDLVIKINGNFVCSGKLSNGLYFVN 777
+GY + N F + NGLY VN
Sbjct: 474 EGYGFRSMDNGCSVYYNDLFYFHAPMMNGLYIVN 507
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 137 bits (346), Expect = 6e-33
Identities = 89/274 (32%), Positives = 134/274 (48%), Gaps = 15/274 (5%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHS---V 171
G + + D+IL+SLP S++ F +N+ +N+ + TL+ L LK EE +K + V
Sbjct: 243 GFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMV 302
Query: 172 QNVEKASSK-SGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGH 348
+ K ++K SG KR+ + T K K G +CF ETGH
Sbjct: 303 MHKRKPNNKKSGQKRKLNSDEITS---------TSNSKTKVQKTGPAKDAECFFYKETGH 353
Query: 349 WKRNCPKSL----------KTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQV 498
WKRNC K L K+ + + VIE++ ++++W D+G+ HIC SLQG +
Sbjct: 354 WKRNCKKYLEQLKQKQQDGKSSTSGINVIEINLATSSTDSWVFDTGSVAHICKSLQGLKR 413
Query: 499 SRELDDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLAS 678
SR L G + +G RV+ AVG + LS P +L LNN +P + +N+IS L +
Sbjct: 414 SRSLARGRVDIRVGNGERVAVVAVGTMTLSLPSGLVLELNNCYCIPALCKNVISASCLQA 473
Query: 679 QGYTC-MFGQDLVIKINGNFVCSGKLSNGLYFVN 777
+GY + N F + NGLY VN
Sbjct: 474 EGYGFRSMDNGCSVYYNDLFYFHAPMMNGLYIVN 507
>gb|PON81075.1| Zinc finger, CCHC-type, partial [Trema orientalis]
Length = 277
Score = 130 bits (328), Expect = 8e-33
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 11/202 (5%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHSVQNV 180
GAEID +Q+DMIL +L ++++QFK+++ ++ KDYTL+ LM L+ TE+I+K S
Sbjct: 79 GAEIDCDTQIDMILNTLSDTFNQFKIDHEIHRKDYTLTCLMKDLQITEDILKKNRSGSAE 138
Query: 181 EKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGHWKRN 360
+ S K +++ P KKKK K +GKCF E GHWKRN
Sbjct: 139 ANVAQASSSKPKSKDKGKRKKKTPASLSP----KKKKTKKNAKLKGKCFHYSEDGHWKRN 194
Query: 361 CPKSL-----------KTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSRE 507
C L K G +L I+ ++ D+ ++W +DSGAT ++CN+LQGF+ +R+
Sbjct: 195 CKTYLALKKEKNNGKDKQGNDNLLFIKACHVVDSIDSWIVDSGATDYVCNTLQGFKETRK 254
Query: 508 LDDGEISFSLGTEARVSAAAVG 573
E + LG + V A+G
Sbjct: 255 FAGEEFTLRLGDGSIVETRAMG 276
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 137 bits (344), Expect = 1e-32
Identities = 92/270 (34%), Positives = 136/270 (50%), Gaps = 11/270 (4%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHS-VQN 177
G + + D+IL SLP SY QF LN+ +N D L+ L LK E+ +K +S V
Sbjct: 238 GFPLSQELATDLILASLPASYGQFILNFHMNGLDKNLTELHMLLKTAEDSIKKINSHVMM 297
Query: 178 VEKASSKSGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGHWKR 357
V+K++S K++ +T T K K SG + +CF C E GHWKR
Sbjct: 298 VQKSTSF---KKKARTWVKGKGKKVLDGIQTNKPKLKTKSGPTQ-ENECFYCKEPGHWKR 353
Query: 358 NCPKSL----KTGKTE-----MLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQVSREL 510
NC K L K G T+ + VI+V + N+W D+G+ HICNS+Q +R +
Sbjct: 354 NCKKYLADLKKNGGTKPSTSGINVIDVLLADSSVNSWVFDTGSVAHICNSMQSLTKNRRV 413
Query: 511 DDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLASQGYT 690
GE+ +G +A+V+A + + L P I+ LNN YVP + RN+IS L ++GY
Sbjct: 414 ARGEMDLRVGNKAKVAALSAETLPLVLPSGFIMELNNCYYVPAMSRNIISASCLMTEGYK 473
Query: 691 CMF-GQDLVIKINGNFVCSGKLSNGLYFVN 777
+ I +N F + NGL+ +N
Sbjct: 474 FIIEDHGCSIFLNDMFYGYAPVLNGLFILN 503
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 135 bits (340), Expect = 4e-32
Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 15/282 (5%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHS---V 171
G + + D+IL+SLP S++ F LN+ +N+ + TL+ L LK EE +K + V
Sbjct: 151 GFPLSQELATDLILQSLPPSFEPFILNFNMNNMNRTLTKLPGMLKTAEESIKKNSNHVMV 210
Query: 172 QNVEKASSK-SGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGH 348
+ K ++K SGP + + CF C E GH
Sbjct: 211 MHKRKPNNKKSGPAKDAE---------------------------------CFFCKEAGH 237
Query: 349 WKRNCPKSL----------KTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQV 498
WKRNC K L K+ + + VIE++ ++++W D+G+ HIC SLQG +
Sbjct: 238 WKRNCKKYLEQLKQKQQDGKSSTSGINVIEINLATSSTDSWVFDTGSVAHICKSLQGLKR 297
Query: 499 SRELDDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLAS 678
SR L GE+ +G ARV+A AVG + LS P +L LNN +P + +N+IS L +
Sbjct: 298 SRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSRLVLELNNYYCIPALCKNVISASCLQA 357
Query: 679 QGYTC-MFGQDLVIKINGNFVCSGKLSNGLYFVNPTVMEVNN 801
+GY D + N F + +GLY VN V N
Sbjct: 358 EGYGFRSVDNDCSVYYNDIFYFHAPMMSGLYIVNLNGYSVYN 399
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 134 bits (337), Expect = 1e-31
Identities = 90/274 (32%), Positives = 136/274 (49%), Gaps = 15/274 (5%)
Frame = +1
Query: 1 GAEIDGQSQVDMILESLPESYDQFKLNYVLNDKDYTLSGLMSALKATEEIVKVPHS---V 171
G ++ + D+IL+SLP S++ F +N+ +N+ + TL+ L LK EE +K + V
Sbjct: 130 GFPLNRELVTDLILQSLPPSFEPFIMNFNMNNLNRTLAELHGMLKTAEESIKKNSNHVMV 189
Query: 172 QNVEKASSK-SGPKRQTQTXXXXXXXXXXXXXPTGGVKKKKASGGEKPRGKCFKCGETGH 348
+ K ++K SG KR+ + T K K G +CF C ETGH
Sbjct: 190 MHKRKPNNKKSGQKRKLNSDEITS---------TSNSKTKVQKTGPAKDAECFFCKETGH 240
Query: 349 WKRNCPKSL----------KTGKTEMLVIEVSYIADTSNTWCIDSGATHHICNSLQGFQV 498
WKRN K L K+ + + VIE++ ++++W D+ + HIC SLQG +
Sbjct: 241 WKRNYKKYLEQLKQKQQDGKSSTSGINVIEINLATSSTDSWVFDTESVAHICKSLQGLKR 300
Query: 499 SRELDDGEISFSLGTEARVSAAAVGVIRLSFPGNKILILNNALYVPNIRRNLISVPSLAS 678
SR L GE+ +G ARV+A AVG + LS P +L LNN + + +N+IS L +
Sbjct: 301 SRSLARGEVDIRVGNGARVAAVAVGTMPLSLPSGIVLELNNCYCIRALCKNVISASCLQA 360
Query: 679 QGYTC-MFGQDLVIKINGNFVCSGKLSNGLYFVN 777
+GY + N F + NGLY VN
Sbjct: 361 EGYGFRSVDNGCSVYYNDIFYFHVPMMNGLYIVN 394