BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00014004
         (631 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020249030.1| pentatricopeptide repeat-containing protein ...   168   2e-45
ref|XP_010910564.1| PREDICTED: pentatricopeptide repeat-containi...   161   2e-42
ref|XP_008778287.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-40
gb|OMO89489.1| hypothetical protein COLO4_19739 [Corchorus olito...   149   4e-40
gb|PKA54815.1| Pentatricopeptide repeat-containing protein [Apos...   154   6e-40
ref|XP_021826825.1| pentatricopeptide repeat-containing protein ...   150   2e-38
ref|XP_007050000.2| PREDICTED: pentatricopeptide repeat-containi...   149   3e-38
gb|EOX94157.1| Pentatricopeptide repeat-containing protein, puta...   149   3e-38
ref|XP_008222289.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-38
gb|OMP03534.1| hypothetical protein CCACVL1_02379 [Corchorus cap...   148   4e-38
ref|XP_020699830.1| pentatricopeptide repeat-containing protein ...   149   6e-38
gb|OWM89829.1| hypothetical protein CDL15_Pgr024578 [Punica gran...   148   7e-38
gb|KCW87022.1| hypothetical protein EUGRSUZ_B03572 [Eucalyptus g...   147   2e-37
ref|XP_007227177.1| pentatricopeptide repeat-containing protein ...   147   2e-37
ref|XP_015898285.1| PREDICTED: pentatricopeptide repeat-containi...   146   3e-37
emb|CDP00897.1| unnamed protein product [Coffea canephora]            145   5e-37
ref|XP_009353486.1| PREDICTED: pentatricopeptide repeat-containi...   145   1e-36
ref|XP_008360202.1| PREDICTED: pentatricopeptide repeat-containi...   145   1e-36
ref|XP_024191936.1| pentatricopeptide repeat-containing protein ...   142   1e-36
ref|XP_021280753.1| pentatricopeptide repeat-containing protein ...   145   1e-36

>ref|XP_020249030.1| pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Asparagus officinalis]
 gb|ONK56096.1| uncharacterized protein A4U43_C10F4090 [Asparagus officinalis]
          Length = 626

 Score =  168 bits (426), Expect = 2e-45
 Identities = 101/200 (50%), Positives = 121/200 (60%)
 Frame = -1

Query: 601 LLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXXXXXXHTP 422
           LLSG  PD               +P   SQIH+LALKL LLSNP               P
Sbjct: 55  LLSGEHPDPRALPLILSSTSPLSSPPFRSQIHSLALKLNLLSNPHLLSSLALSYGPTKGP 114

Query: 421 DVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKAC 242
            + S    S    NP  WT+LL     +S P  ALKLFDKML+ + +LDSVA     KAC
Sbjct: 115 TLLSQ---SPDPRNPLPWTLLLS----KSNPRSALKLFDKMLQLNIELDSVAYIVLMKAC 167

Query: 241 GRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWT 62
           G+  S+R+A+RVH+VVR  G L DV+V NA+VKM++ECG + EA+ VFEGM  +DLVTWT
Sbjct: 168 GQLGSLREAKRVHKVVRLSG-LSDVVVHNAMVKMFLECGGVEEATRVFEGMRVKDLVTWT 226

Query: 61  TMANGHVRSGGFNEGLKLLR 2
           TM  G VRSG FNEGLKLLR
Sbjct: 227 TMIVGFVRSGEFNEGLKLLR 246


>ref|XP_010910564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Elaeis guineensis]
          Length = 669

 Score =  161 bits (407), Expect = 2e-42
 Identities = 84/209 (40%), Positives = 123/209 (58%)
 Frame = -1

Query: 628 QTLLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXX 449
           +T+L +R MLL G  PD                 +   Q+HA ALKL   S+        
Sbjct: 83  KTILVYRHMLLCGARPDHRTLPAVLRASGLSDAFSNGKQVHAHALKLGFASDSYVVSALM 142

Query: 448 XXXXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSV 269
                    D+A+ + +     N   WT+L   +L   +P  AL+LF +M+ S+ +LD+V
Sbjct: 143 EFYGQFEGADIAAMVFSCSNQKNSVSWTLLAKLYLTEDKPSLALQLFHQMVNSNVELDAV 202

Query: 268 ALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGM 89
           AL TAA+ACGR RSV + +++HE+ R+ G   DVLVGN+++KMY+EC RI EA A+F+ M
Sbjct: 203 ALVTAARACGRLRSVHEGKKLHEIARKTGLESDVLVGNSLMKMYLECKRIEEARALFDQM 262

Query: 88  GARDLVTWTTMANGHVRSGGFNEGLKLLR 2
            ++D  +WTT+ +G+V +GGFNEGLKL R
Sbjct: 263 PSKDAASWTTIISGYVNNGGFNEGLKLFR 291



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/169 (24%), Positives = 72/169 (42%)
 Frame = -1

Query: 514 QIHALALKLRLLSNPXXXXXXXXXXXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRS 335
           ++H +A K  L S+                 + A +L    P  +   WT ++  ++   
Sbjct: 222 KLHEIARKTGLESDVLVGNSLMKMYLECKRIEEARALFDQMPSKDAASWTTIISGYVNNG 281

Query: 334 EPEHALKLFDKMLESDADLDSVALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGN 155
                LKLF  M       DS  ++    AC R  + +    +H  + RR    +  V N
Sbjct: 282 GFNEGLKLFRVMCIEGVRPDSFTVSAILPACARIAAHKHGMEIHGCIIRRHIQMNPTVSN 341

Query: 154 AVVKMYIECGRIGEASAVFEGMGARDLVTWTTMANGHVRSGGFNEGLKL 8
           A++ MY++ G +  AS +F+ M  +D ++WT M  G+   G  + G+ L
Sbjct: 342 ALMDMYVKSGSVKAASNIFDRMLEKDAISWTVMIVGYSLHGRGDRGVSL 390


>ref|XP_008778287.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Phoenix dactylifera]
          Length = 668

 Score =  156 bits (394), Expect = 1e-40
 Identities = 84/209 (40%), Positives = 120/209 (57%)
 Frame = -1

Query: 628 QTLLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXX 449
           QT+L +R MLL GV PD H               +   Q+HA ALKL   S+        
Sbjct: 82  QTILVYRHMLLCGVRPDRHTLPAVLRASGLSDASSNGKQVHAHALKLGFASDSYVVTALM 141

Query: 448 XXXXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSV 269
                    D+A  +       N   WT+L   +L   +P  AL+LF +M+ S+ +LD V
Sbjct: 142 EFYGQFEGADIAGVVFNCSNQKNSVSWTLLAKLYLMEDKPSFALQLFHRMVNSNMELDVV 201

Query: 268 ALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGM 89
           ALATAA+ACG+ RSV + +++ ++  R G   DVLVGN+++KMY++C RI EA A+F+ M
Sbjct: 202 ALATAARACGQLRSVHEGKKLLKIAGRTGLESDVLVGNSLLKMYLDCERIEEARALFDQM 261

Query: 88  GARDLVTWTTMANGHVRSGGFNEGLKLLR 2
            ++D V WTT+ +G+V +G FNEGLKL R
Sbjct: 262 PSKDAVAWTTIISGYVNNGVFNEGLKLFR 290



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 35/136 (25%), Positives = 62/136 (45%)
 Frame = -1

Query: 415 ASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGR 236
           A +L    P  +   WT ++  ++        LKLF  M        S  ++    AC R
Sbjct: 254 ARALFDQMPSKDAVAWTTIISGYVNNGVFNEGLKLFRAMCIEGVAPVSFTVSAILPACAR 313

Query: 235 SRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTM 56
             + +  + +H  + RR    +  V NA++ MY++ G I  AS +F  +  +D+++WT M
Sbjct: 314 VAAYKHGKEIHGCIIRRQIHMNPTVSNALMDMYVKSGSIEAASKIFNRILEKDVISWTVM 373

Query: 55  ANGHVRSGGFNEGLKL 8
             G+   G  + G+ L
Sbjct: 374 ILGYSLHGRGDRGISL 389


>gb|OMO89489.1| hypothetical protein COLO4_19739 [Corchorus olitorius]
          Length = 354

 Score =  149 bits (377), Expect = 4e-40
 Identities = 77/201 (38%), Positives = 114/201 (56%)
 Frame = -1

Query: 604 MLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXXXXXXHT 425
           M+L GV PD H             N     Q+HA A KL L S+                
Sbjct: 1   MMLRGVRPDKHTLPRVLTASRLCTNVAFGKQVHAHAFKLGLSSDLYIITALMEMYGRLDG 60

Query: 424 PDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKA 245
            DVA  +L + P TN   WT+L   +L  ++P  A+++F++ML   AD+D V LATA  A
Sbjct: 61  VDVAKWVLDNAPTTNSVAWTILAKLYLMDNKPHLAIEIFNQMLPLKADIDPVGLATAIGA 120

Query: 244 CGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTW 65
           C   +S + A+++H++ +  G    +LVGN+++KMY+ C  I EA +VFE M ++D+++W
Sbjct: 121 CSLLKSRQQAKKLHQIAKECGLESHILVGNSLLKMYVGCDSIEEAQSVFEAMPSKDVISW 180

Query: 64  TTMANGHVRSGGFNEGLKLLR 2
           T M +GHV+ GG+NEGLKL R
Sbjct: 181 TQMIHGHVKKGGYNEGLKLFR 201


>gb|PKA54815.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 641

 Score =  154 bits (388), Expect = 6e-40
 Identities = 86/212 (40%), Positives = 123/212 (58%), Gaps = 2/212 (0%)
 Frame = -1

Query: 631 HQTLLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXX 452
           H  ++ +R MLLSG +PD H             +     Q+H  ALKLRL  +       
Sbjct: 48  HLAVVAYRKMLLSGAVPDRHSLPRALAAARLSSSFFAGRQVHCHALKLRLAGDSFVISAI 107

Query: 451 XXXXXXXHTPDVASSLLTSQPCTNPTC--WTVLLDSHLKRSEPEHALKLFDKMLESDADL 278
                     D A+S+L    C   +C  W++L   +L    P  AL++F +  +S   L
Sbjct: 108 VELYSRFAGVDAAASVLFF--CNPKSCIPWSLLAKFYLLEKRPSSALQVFLQSADSGVSL 165

Query: 277 DSVALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVF 98
           D+V LATAA+ACG  +SV DA++VHE+ + RGF  D+LVGN+++KMY+ECG+I E+ A+F
Sbjct: 166 DAVLLATAARACGEMKSVPDAKKVHEIAKGRGFDRDLLVGNSLLKMYVECGKIEESRALF 225

Query: 97  EGMGARDLVTWTTMANGHVRSGGFNEGLKLLR 2
           + M  +D ++WTT+  G VR G FNEGLKLLR
Sbjct: 226 DFMMFKDEISWTTVIAGMVRHGEFNEGLKLLR 257



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/123 (26%), Positives = 59/123 (47%)
 Frame = -1

Query: 370 WTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGRSRSVRDARRVHEVVR 191
           WT ++   ++  E    LKL  +M  + A+ D   ++ A  AC R  + +  + +H  + 
Sbjct: 236 WTTVIAGMVRHGEFNEGLKLLREMATAGANPDEFTVSAALPACARMAAGKQGKEIHGYIV 295

Query: 190 RRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTMANGHVRSGGFNEGLK 11
           R     +  V NA++ MY + G +  A+ VF+ M  +D ++WT M   +   G    G+ 
Sbjct: 296 RHRIEMNTTVQNALMDMYAKSGSVDIAAKVFDEMAEKDEISWTVMIMAYSLHGKGEMGIS 355

Query: 10  LLR 2
           L R
Sbjct: 356 LFR 358


>ref|XP_021826825.1| pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Prunus avium]
          Length = 655

 Score =  150 bits (378), Expect = 2e-38
 Identities = 82/204 (40%), Positives = 114/204 (55%)
 Frame = -1

Query: 613 FRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXXXXX 434
           +  MLL GVLPD H             +  L  Q+H  ALKL    +             
Sbjct: 74  YHQMLLRGVLPDRHTLPRILSASRLSADLPLGKQLHGHALKLGCSDDRYVVAALIELYGR 133

Query: 433 XHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATA 254
            H+ D A  L    P  +   WT+L   ++   +P  AL +FD M+ES A +D VALATA
Sbjct: 134 LHSFDAAKVLFDKSPIKDSVSWTMLARLYIMEGKPSMALHVFDGMVESGAQIDPVALATA 193

Query: 253 AKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDL 74
           A ACG  +SV D R+VH V + RG   DVLV N ++KMY++CG + +A +VF+ M ++D+
Sbjct: 194 AGACGVLKSVIDGRKVHRVAKERGLEFDVLVSNTLLKMYMDCGCVDDARSVFDQMPSKDV 253

Query: 73  VTWTTMANGHVRSGGFNEGLKLLR 2
           ++WT M + +V+ GGFNEGLKL R
Sbjct: 254 ISWTGMIHANVKRGGFNEGLKLFR 277



 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 42/138 (30%), Positives = 73/138 (52%)
 Frame = -1

Query: 421 DVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKAC 242
           D A S+    P  +   WT ++ +++KR      LKLF +M+      DS+++++   AC
Sbjct: 239 DDARSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGVKPDSLSVSSVLPAC 298

Query: 241 GRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWT 62
            R  + +  + +H  + R G   ++ V NA++ MY++ G I  AS +F G+  RD+V+WT
Sbjct: 299 ARMSASKQGKEIHGYLIRNGIRMNLTVLNALMDMYVKSGFIESASKIFAGLKHRDVVSWT 358

Query: 61  TMANGHVRSGGFNEGLKL 8
            M  G+   G    G+ L
Sbjct: 359 VMILGYSLHGQGQLGVDL 376


>ref|XP_007050000.2| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Theobroma cacao]
          Length = 656

 Score =  149 bits (377), Expect = 3e-38
 Identities = 79/209 (37%), Positives = 114/209 (54%)
 Frame = -1

Query: 628 QTLLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXX 449
           Q L  +  M+L GV PD H             N     Q+HA A KL   S+        
Sbjct: 70  QVLSVYHGMMLRGVRPDKHTLPRVLTASRLCTNLAFGKQVHAHAFKLGFSSDLYVITALM 129

Query: 448 XXXXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSV 269
                 H  D A  +L + P TN   WT+L   HL  ++P  A ++FD+ML   AD+D V
Sbjct: 130 EMYGRLHGVDAAKWVLDNAPTTNSVAWTILAKLHLIDNKPHLAFEIFDQMLRLKADIDPV 189

Query: 268 ALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGM 89
            LATA  AC   +S++ AR  H++ R  GF   +L+GN+++KMYI+C  + EA + F+ M
Sbjct: 190 GLATAIGACSLLKSLQQARNAHQIARDCGFEFHLLIGNSLLKMYIDCDSLEEARSFFDAM 249

Query: 88  GARDLVTWTTMANGHVRSGGFNEGLKLLR 2
            ++D+++WT M  G+V+ GG+NEGLKL R
Sbjct: 250 PSKDVISWTEMIRGYVKKGGYNEGLKLFR 278



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/136 (30%), Positives = 70/136 (51%)
 Frame = -1

Query: 415 ASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGR 236
           A S   + P  +   WT ++  ++K+      LKLF +M+ +    DS+ +++   AC R
Sbjct: 242 ARSFFDAMPSKDVISWTEMIRGYVKKGGYNEGLKLFRRMIRAGIKPDSLTISSILPACAR 301

Query: 235 SRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTM 56
             + +  + +H  + R G   ++ V NA++ MY++ G I  AS VF  M  RD+V+WT M
Sbjct: 302 VPAHKQGKELHAYLFRNGIDLNLTVQNAIMDMYVKSGFIELASTVFMCMMERDIVSWTIM 361

Query: 55  ANGHVRSGGFNEGLKL 8
             G+   G    GL L
Sbjct: 362 ILGYSLHGQGGRGLDL 377


>gb|EOX94157.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 656

 Score =  149 bits (377), Expect = 3e-38
 Identities = 79/209 (37%), Positives = 114/209 (54%)
 Frame = -1

Query: 628 QTLLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXX 449
           Q L  +  M+L GV PD H             N     Q+HA A KL   S+        
Sbjct: 70  QVLSVYHGMMLRGVRPDKHTLPRVLTASRLCTNLAFGKQVHAHAFKLGFSSDLYVITALM 129

Query: 448 XXXXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSV 269
                 H  D A  +L + P TN   WT+L   HL  ++P  A ++FD+ML   AD+D V
Sbjct: 130 EMYGRLHGVDAAKWVLDNAPTTNSVAWTILAKLHLIDNKPHLAFEIFDQMLRLKADIDPV 189

Query: 268 ALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGM 89
            LATA  AC   +S++ AR  H++ R  GF   +L+GN+++KMYI+C  + EA + F+ M
Sbjct: 190 GLATAIGACSLLKSLQQARNAHQIARDCGFEFHLLIGNSLLKMYIDCDSLEEARSFFDAM 249

Query: 88  GARDLVTWTTMANGHVRSGGFNEGLKLLR 2
            ++D+++WT M  G+V+ GG+NEGLKL R
Sbjct: 250 PSKDVISWTEMIRGYVKKGGYNEGLKLFR 278



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/136 (30%), Positives = 70/136 (51%)
 Frame = -1

Query: 415 ASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGR 236
           A S   + P  +   WT ++  ++K+      LKLF +M+ +    DS+ +++   AC R
Sbjct: 242 ARSFFDAMPSKDVISWTEMIRGYVKKGGYNEGLKLFRRMIRAGIKPDSLTISSILPACAR 301

Query: 235 SRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTM 56
             + +  + +H  + R G   ++ V NA++ MY++ G I  AS VF  M  RD+V+WT M
Sbjct: 302 VPAHKQGKELHAYLFRNGIDLNLTVQNAIMDMYVKSGFIELASTVFMCMMERDIVSWTIM 361

Query: 55  ANGHVRSGGFNEGLKL 8
             G+   G    GL L
Sbjct: 362 ILGYSLHGQGGRGLDL 377


>ref|XP_008222289.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Prunus mume]
          Length = 654

 Score =  149 bits (376), Expect = 3e-38
 Identities = 81/204 (39%), Positives = 113/204 (55%)
 Frame = -1

Query: 613 FRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXXXXX 434
           +  MLL GV PD H             +  L  Q+H  ALKL    +             
Sbjct: 74  YHQMLLRGVRPDRHTLPRILSASRLSADLPLGKQLHGHALKLGCSDDRYVVAALIELYGR 133

Query: 433 XHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATA 254
            H+ D A  L    P  +   WT+L   ++   +P  AL +FD M+ES A +D VALATA
Sbjct: 134 LHSVDAAKGLFDKSPVKDSVSWTMLARLYIMEGKPSMALHVFDGMVESGAQIDPVALATA 193

Query: 253 AKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDL 74
           A ACG  +SV D ++VH V + RG   DVLV N ++KMY++CG I +A +VF+ M ++D+
Sbjct: 194 AGACGMLKSVIDGKKVHRVAKERGLEFDVLVSNTLLKMYMDCGCIDDARSVFDQMPSKDV 253

Query: 73  VTWTTMANGHVRSGGFNEGLKLLR 2
           ++WT M + +V+ GGFNEGLKL R
Sbjct: 254 ISWTGMIHANVKRGGFNEGLKLFR 277



 Score = 77.0 bits (188), Expect = 9e-13
 Identities = 41/140 (29%), Positives = 72/140 (51%)
 Frame = -1

Query: 421 DVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKAC 242
           D A S+    P  +   WT ++ +++KR      LKLF +M+      DS+++++   AC
Sbjct: 239 DDARSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGVKPDSLSVSSVLPAC 298

Query: 241 GRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWT 62
            R  + +  + +H  + R G   ++ V NA++ MY+  G I  AS +F  +  +D+V+WT
Sbjct: 299 ARMSASKQGKEIHGYLIRNGIRMNLTVLNALMDMYVRSGFIESASKIFARLKHKDVVSWT 358

Query: 61  TMANGHVRSGGFNEGLKLLR 2
            M  G+   G    G+ L R
Sbjct: 359 VMILGYSLHGQGQLGVDLFR 378


>gb|OMP03534.1| hypothetical protein CCACVL1_02379 [Corchorus capsularis]
          Length = 580

 Score =  148 bits (374), Expect = 4e-38
 Identities = 76/201 (37%), Positives = 115/201 (57%)
 Frame = -1

Query: 604 MLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXXXXXXHT 425
           M+L GV PD H             N     Q+HA A KL L S+               +
Sbjct: 1   MMLRGVRPDKHTLPRVLTASRLCFNLAFGKQVHAHAFKLGLSSDLYIITALMEMYGRLDS 60

Query: 424 PDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKA 245
            DVA  +L + P TN   WT+L   +L  ++P  A+++F++ML   AD+D V LATA  A
Sbjct: 61  VDVAKWVLDNAPSTNSVAWTILSKLYLMDNKPHLAIEIFNQMLPLKADIDPVGLATAIGA 120

Query: 244 CGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTW 65
               +S++ A+++H++ +  G    +LVGN+++KMY+ C  I EA +VFE M ++D+++W
Sbjct: 121 FSHLKSLKQAKKLHQIAKECGLESHILVGNSLLKMYVGCDSIEEAQSVFEAMPSKDVISW 180

Query: 64  TTMANGHVRSGGFNEGLKLLR 2
           T M +GHV+ GG+NEGLKL R
Sbjct: 181 TQMIHGHVKKGGYNEGLKLFR 201



 Score = 77.8 bits (190), Expect = 5e-13
 Identities = 41/136 (30%), Positives = 70/136 (51%)
 Frame = -1

Query: 415 ASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGR 236
           A S+  + P  +   WT ++  H+K+      LKLF +M+ +    D   +++   +CGR
Sbjct: 165 AQSVFEAMPSKDVISWTQMIHGHVKKGGYNEGLKLFRRMISAGIKPDCFTISSILPSCGR 224

Query: 235 SRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTM 56
             + +  + +H  + R G   ++ V NAV+ MY++ G I  AS +F  M  +D+V+WT M
Sbjct: 225 ISAHKQGKEIHAYLLRNGIDMNLTVQNAVMDMYVKSGFIELASNMFMCMMEKDIVSWTIM 284

Query: 55  ANGHVRSGGFNEGLKL 8
             G+   G    GL L
Sbjct: 285 MYGYSLHGQGGRGLDL 300


>ref|XP_020699830.1| pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Dendrobium catenatum]
          Length = 682

 Score =  149 bits (375), Expect = 6e-38
 Identities = 82/207 (39%), Positives = 117/207 (56%)
 Frame = -1

Query: 622 LLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXX 443
           +L +R MLL+GVLPD H                   Q+H+  LKLRLL +          
Sbjct: 94  VLAYRDMLLAGVLPDRHSLPRALDASRLSSVFFTGKQLHSHVLKLRLLGDSYVLSALMEL 153

Query: 442 XXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVAL 263
                  D ASSLL      NP  +T+L   +L  + P+ AL +F ++  S   LD +A+
Sbjct: 154 YSQFSGVDSASSLLFHSNPQNPIAYTLLARLYLMENNPDSALHVFYQLAASGVKLDPIAV 213

Query: 262 ATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGA 83
           ATAAKAC   +S RD +++H++ +      DVLV N+++KMY+ECGR  E  A+F+ M  
Sbjct: 214 ATAAKACREMKSTRDGKKIHDLAKESKLDCDVLVANSLLKMYVECGRTEEILALFDSMPH 273

Query: 82  RDLVTWTTMANGHVRSGGFNEGLKLLR 2
           +D V+WTT+ N +V++GGFNEGLKL R
Sbjct: 274 KDAVSWTTIINNNVQNGGFNEGLKLFR 300



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/134 (27%), Positives = 65/134 (48%)
 Frame = -1

Query: 409 SLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGRSR 230
           +L  S P  +   WT +++++++       LKLF  M+      D  +++    AC R  
Sbjct: 266 ALFDSMPHKDAVSWTTIINNNVQNGGFNEGLKLFRAMVVDGIKPDEFSVSAVLPACARMA 325

Query: 229 SVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTMAN 50
           + +    +H  + R+    +  V NA++ MY + G I  AS VF+ M  RD ++WT M  
Sbjct: 326 ARKHGMEIHGFIIRQHIDMNSAVQNALIDMYAKSGSIENASKVFDRMTERDAISWTVMIL 385

Query: 49  GHVRSGGFNEGLKL 8
           G+   G  + G+ L
Sbjct: 386 GYSLHGHGDLGVAL 399


>gb|OWM89829.1| hypothetical protein CDL15_Pgr024578 [Punica granatum]
 gb|PKI71563.1| hypothetical protein CRG98_008080 [Punica granatum]
          Length = 659

 Score =  148 bits (374), Expect = 7e-38
 Identities = 83/207 (40%), Positives = 113/207 (54%)
 Frame = -1

Query: 622 LLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXX 443
           LL +  MLL GV  D H             + +L  Q+H  ALKL   S+          
Sbjct: 78  LLTYEQMLLRGVRVDMHTLPRVLAASRLLGDLSLGKQVHGHALKLGHCSDNYVISSLIEM 137

Query: 442 XXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVAL 263
                  + A  +    P  NP  WT+L   +L  S+P+ A+ LF KM+    ++DSVAL
Sbjct: 138 YGILDGVESARWVFDKSPNRNPVSWTLLAKLYLAESKPKLAVDLFKKMVRFGVEVDSVAL 197

Query: 262 ATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGA 83
            TA  ACG+ +S+RD R +HEV R+ GF  DVLV NA+V+MYI+C    +A  +F+ M  
Sbjct: 198 GTALVACGQLKSLRDGRHIHEVARKLGFEFDVLVSNALVRMYIDCRSFEDALTLFDRMPD 257

Query: 82  RDLVTWTTMANGHVRSGGFNEGLKLLR 2
           +D+V WTT+   HV+ GGFNE LKLLR
Sbjct: 258 KDVVMWTTIIQAHVKMGGFNESLKLLR 284



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/136 (27%), Positives = 67/136 (49%)
 Frame = -1

Query: 415 ASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGR 236
           A +L    P  +   WT ++ +H+K      +LKL  +M +     D++++++   ACGR
Sbjct: 248 ALTLFDRMPDKDVVMWTTIIQAHVKMGGFNESLKLLRQMSKEGISPDTLSVSSILPACGR 307

Query: 235 SRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTM 56
             + +  + +H  + R G   ++ V NA+V MY++ G    A  VF  +  +D ++WT M
Sbjct: 308 MTASKCGKEMHGYLLRNGLDLNLKVQNALVDMYVKSGSFEYALKVFGRIEEKDAISWTVM 367

Query: 55  ANGHVRSGGFNEGLKL 8
             G    G    G+ L
Sbjct: 368 VMGSSLHGQGGLGIDL 383


>gb|KCW87022.1| hypothetical protein EUGRSUZ_B03572 [Eucalyptus grandis]
          Length = 610

 Score =  147 bits (370), Expect = 2e-37
 Identities = 77/207 (37%), Positives = 115/207 (55%)
 Frame = -1

Query: 622 LLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXX 443
           +L ++ M+  GV PD H             +     Q+H  ALKL L  +          
Sbjct: 26  ILVYQQMMSRGVCPDKHTLPRVLTASRLSGDLLFGKQVHGHALKLGLYGDRYVGTALIEM 85

Query: 442 XXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVAL 263
                +   A SL     C +   WTVL   +L  ++P+ AL LF +M+ S   +DSVAL
Sbjct: 86  YGWLDSIGAARSLFDKFTCKDSVSWTVLARLYLTENKPQLALDLFGEMVNSGVTIDSVAL 145

Query: 262 ATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGA 83
           AT   ACGR +S+ + R++ E+ RR G   DVLVGN++++MYI+CG I +A  +F+ M  
Sbjct: 146 ATVIGACGRVKSLHEGRKLQEIARRCGLESDVLVGNSLLQMYIDCGSIDDARGLFDQMPN 205

Query: 82  RDLVTWTTMANGHVRSGGFNEGLKLLR 2
           RD+++WTT+ +G+V+ GGFNE LKL +
Sbjct: 206 RDVISWTTIIHGYVKQGGFNESLKLFQ 232



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/130 (24%), Positives = 66/130 (50%)
 Frame = -1

Query: 421 DVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKAC 242
           D A  L    P  +   WT ++  ++K+     +LKLF +M +     D++ ++    AC
Sbjct: 194 DDARGLFDQMPNRDVISWTTIIHGYVKQGGFNESLKLFQQMNKDGMKPDAILISALLPAC 253

Query: 241 GRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWT 62
            R  + +  + +H  + R G   ++ V NA++ MY++   +  A  +F+ + ++D+++WT
Sbjct: 254 ARMTACKHGKEIHGHLLRSGMKLNLTVQNAIMDMYMKASCLEYAYKIFKEIDSKDVISWT 313

Query: 61  TMANGHVRSG 32
            M  G+   G
Sbjct: 314 VMILGYSLHG 323


>ref|XP_007227177.1| pentatricopeptide repeat-containing protein DOT4, chloroplastic
           [Prunus persica]
 gb|ONI29728.1| hypothetical protein PRUPE_1G211300 [Prunus persica]
          Length = 654

 Score =  147 bits (371), Expect = 2e-37
 Identities = 80/204 (39%), Positives = 113/204 (55%)
 Frame = -1

Query: 613 FRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXXXXX 434
           +  MLL GV PD H             +  L  Q+H  ALKL    +             
Sbjct: 74  YHQMLLRGVRPDRHTLPRILSASRLSVDLPLGKQLHGHALKLGCSDDRYVVAALIELYGR 133

Query: 433 XHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATA 254
            H+ D A  L    P  +   WT+L   ++   +P  AL +FD M+ES A +D VALATA
Sbjct: 134 LHSVDAAKGLFDKSPVKDSVSWTMLARLYIMEGKPGMALHVFDGMVESGAQIDPVALATA 193

Query: 253 AKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDL 74
           A ACG  +SV D ++VH V + RG   DVLV N ++KMY++CG + +A +VF+ M ++D+
Sbjct: 194 AGACGMLKSVIDGKKVHRVAKERGLEFDVLVSNTLLKMYMDCGCVDDAWSVFDQMPSKDV 253

Query: 73  VTWTTMANGHVRSGGFNEGLKLLR 2
           ++WT M + +V+ GGFNEGLKL R
Sbjct: 254 ISWTGMIHANVKRGGFNEGLKLFR 277



 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 43/140 (30%), Positives = 75/140 (53%)
 Frame = -1

Query: 421 DVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKAC 242
           D A S+    P  +   WT ++ +++KR      LKLF +M+   A  DS+++++   AC
Sbjct: 239 DDAWSVFDQMPSKDVISWTGMIHANVKRGGFNEGLKLFRQMIADGAKPDSLSVSSVLPAC 298

Query: 241 GRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWT 62
            R  + +  + +H  + R G   ++ V NA++ MY++ G I  AS +F G+  +D+V+WT
Sbjct: 299 ARMSASKQGKEIHGYLIRNGIRMNLTVLNALMDMYVKSGFIESASKIFAGLKDKDVVSWT 358

Query: 61  TMANGHVRSGGFNEGLKLLR 2
            M  G+   G    G+ L R
Sbjct: 359 VMILGYSLHGQGQLGVNLFR 378


>ref|XP_015898285.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Ziziphus jujuba]
          Length = 666

 Score =  146 bits (369), Expect = 3e-37
 Identities = 80/205 (39%), Positives = 114/205 (55%), Gaps = 1/205 (0%)
 Frame = -1

Query: 613 FRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXXXXX 434
           +  MLL GV PD H                L  Q+H  ALKL   S+             
Sbjct: 84  YHQMLLRGVHPDRHTLPRVLAASRLSGYLFLGKQLHGQALKLGFSSDQYVVTALLEIYGR 143

Query: 433 XHTPDVASSLLT-SQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALAT 257
             T D A  LL  S P  N   WT+L   +++  +P  A+ LF +ML+  A++DSVALAT
Sbjct: 144 LDTVDTARWLLDKSSPSRNSVSWTLLAKLYIEEGQPSSAIHLFYQMLDFGAEIDSVALAT 203

Query: 256 AAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARD 77
           A  AC   +S++  R+VH+V R  G   DVLV N+++KMYI+C  I EA  +F+ M ++D
Sbjct: 204 AIVACASLKSLKQGRKVHQVARNCGLEFDVLVSNSLLKMYIDCSSIQEARVIFDSMPSKD 263

Query: 76  LVTWTTMANGHVRSGGFNEGLKLLR 2
           +++WT++ + +V+ GGFNEGLKL R
Sbjct: 264 IISWTSIIHAYVKKGGFNEGLKLFR 288



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/136 (29%), Positives = 71/136 (52%)
 Frame = -1

Query: 415 ASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGR 236
           A  +  S P  +   WT ++ +++K+      LKLF +M++     D +++++   AC R
Sbjct: 252 ARVIFDSMPSKDIISWTSIIHAYVKKGGFNEGLKLFRQMVKDGLKPDQLSISSILPACAR 311

Query: 235 SRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTM 56
             + +  R +H  + R G   +V V NAV+ MY + G I  AS +F  +  +D+V+WT M
Sbjct: 312 VTANKQGREIHGYLLRNGMELNVTVFNAVIDMYAKSGCINSASKMFRQLRWKDVVSWTIM 371

Query: 55  ANGHVRSGGFNEGLKL 8
             G+   G  + G+ L
Sbjct: 372 IMGYSLHGQGDLGVDL 387


>emb|CDP00897.1| unnamed protein product [Coffea canephora]
          Length = 581

 Score =  145 bits (366), Expect = 5e-37
 Identities = 79/204 (38%), Positives = 113/204 (55%), Gaps = 3/204 (1%)
 Frame = -1

Query: 604 MLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXXXXXXXXHT 425
           MLL GV PD H             N +L  Q+H   +K   +S+                
Sbjct: 1   MLLLGVRPDRHTLPRVLAASRLLGNLSLGKQLHCHVIKFGFVSDAYVTSAIVDLYGQLEG 60

Query: 424 PDVASSLLTSQPC--TNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADL-DSVALATA 254
              A     +      N   WT+L   ++KR++PE A+ LF++M++    + D+VAL T 
Sbjct: 61  VHAAKWYFKTANFDRNNAVAWTLLAGMYVKRNKPELAIDLFNEMIDHGGKIVDAVALVTV 120

Query: 253 AKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDL 74
             ACG  +S+RD RR+H++ +  G   D+LVGNA+VKMYIECG I +A AVF+G+  +D 
Sbjct: 121 ITACGMLKSLRDGRRIHQIAKDFGLDIDILVGNALVKMYIECGSIRDARAVFDGLRCKDA 180

Query: 73  VTWTTMANGHVRSGGFNEGLKLLR 2
           ++WT M NG+V+ GGFNEGLKL R
Sbjct: 181 ISWTAMINGYVKKGGFNEGLKLFR 204



 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 39/127 (30%), Positives = 66/127 (51%)
 Frame = -1

Query: 388 CTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGRSRSVRDARR 209
           C +   WT +++ ++K+      LKLF  M+      D+ A+++    C R  + ++ + 
Sbjct: 177 CKDAISWTAMINGYVKKGGFNEGLKLFRLMIGDGIKADAFAISSVLPGCARVAANKNGKE 236

Query: 208 VHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTMANGHVRSGG 29
           +H  + R G   +V V NA++ MY++ G I  AS VF  M  RD+++WT M  GH   G 
Sbjct: 237 IHGHLIRNGIDMNVTVLNALMDMYVKSGSIEYASRVFAAMKDRDVISWTIMILGHSLHGQ 296

Query: 28  FNEGLKL 8
              G+ L
Sbjct: 297 GKVGMDL 303


>ref|XP_009353486.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 693

 Score =  145 bits (366), Expect = 1e-36
 Identities = 78/210 (37%), Positives = 114/210 (54%)
 Frame = -1

Query: 631 HQTLLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXX 452
           H  L  +  ML+ GV PD H             + +L  Q+HA A KL    +       
Sbjct: 106 HHALATYHQMLVRGVRPDRHTLPRVLSASRLSADLSLGKQLHAHAHKLGCSGDRYVVAAL 165

Query: 451 XXXXXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDS 272
                   + D A  L       +   WT+L+  ++   +P  A+ +F++M+ES A +DS
Sbjct: 166 IELYGRLDSADSAKGLFDKSLVKDSVSWTMLVRLYIAEGKPGKAVHVFERMVESGAQIDS 225

Query: 271 VALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEG 92
           VA+ATAA ACG  RS+ D  +VH V + RG   DVLV N ++KMY++CG + EA AVF  
Sbjct: 226 VAVATAAGACGMLRSLIDGTKVHRVAKERGLEYDVLVSNTLLKMYMDCGCVDEAWAVFNQ 285

Query: 91  MGARDLVTWTTMANGHVRSGGFNEGLKLLR 2
           M  +D+++WT M + +V+ GGFN+GLKL R
Sbjct: 286 MPEKDVISWTEMIHANVKRGGFNDGLKLFR 315



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/138 (28%), Positives = 69/138 (50%)
 Frame = -1

Query: 421 DVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKAC 242
           D A ++    P  +   WT ++ +++KR      LKLF +M+      D +++++   AC
Sbjct: 277 DEAWAVFNQMPEKDVISWTEMIHANVKRGGFNDGLKLFRQMIGDGVKPDPLSVSSVLPAC 336

Query: 241 GRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWT 62
            R  + +  +  H  + R G   +  V NA++ MY++ G I  A+ VF  +  RDLV+WT
Sbjct: 337 ARMSAGKHGKETHGFLLRHGIRMNPTVLNALMDMYVKSGFIESAAKVFARLKYRDLVSWT 396

Query: 61  TMANGHVRSGGFNEGLKL 8
            M  G+   G    G+ L
Sbjct: 397 VMITGYSLHGQGKIGVDL 414


>ref|XP_008360202.1| PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Malus domestica]
          Length = 655

 Score =  145 bits (365), Expect = 1e-36
 Identities = 79/210 (37%), Positives = 112/210 (53%)
 Frame = -1

Query: 631 HQTLLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXX 452
           H     +  MLL GV PD H             + +L  Q+HA A KL    +       
Sbjct: 68  HHAXATYHQMLLRGVRPDRHTLPRVLSASRLSADLSLGKQLHAHAHKLGCSGDRYVVAAL 127

Query: 451 XXXXXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDS 272
                   + D A  L       +   WT+L   ++   +P  A+ +F++M+ES A +DS
Sbjct: 128 IELYGRLDSADSAKGLFDKSLVKDSVSWTMLARLYIAEGKPGKAVHVFERMVESGAQIDS 187

Query: 271 VALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEG 92
           VA+ATAA ACG  RS+ D  +VH V + RG   DVLV N ++KMY++CG + EA AVF  
Sbjct: 188 VAVATAAGACGMLRSLIDGTKVHRVAKERGLEYDVLVSNTLLKMYMDCGCVDEAWAVFNQ 247

Query: 91  MGARDLVTWTTMANGHVRSGGFNEGLKLLR 2
           M  +D+++WT M + +V+ GGFNEGLKL R
Sbjct: 248 MPEKDVISWTEMIHANVKRGGFNEGLKLFR 277



 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 40/138 (28%), Positives = 69/138 (50%)
 Frame = -1

Query: 421 DVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKAC 242
           D A ++    P  +   WT ++ +++KR      LKLF +M+      D +++++   AC
Sbjct: 239 DEAWAVFNQMPEKDVISWTEMIHANVKRGGFNEGLKLFRQMVGDGVKPDPLSVSSVLPAC 298

Query: 241 GRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWT 62
            R  + +  +  H  + R G   ++ V NA++ MY++ G I  A+ VF     RDLV+WT
Sbjct: 299 ARMSAGKHGKETHGFLLRHGIRMNLTVLNALMDMYVKSGFIXSAAKVFARXKYRDLVSWT 358

Query: 61  TMANGHVRSGGFNEGLKL 8
            M  G+   G    G+ L
Sbjct: 359 VMITGYSLHGQGKIGVDL 376


>ref|XP_024191936.1| pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like isoform X2 [Rosa chinensis]
          Length = 473

 Score =  142 bits (359), Expect = 1e-36
 Identities = 76/210 (36%), Positives = 113/210 (53%)
 Frame = -1

Query: 631 HQTLLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXX 452
           H  +  +R ML  GV PD H             + +L  Q+H  ALK    ++       
Sbjct: 68  HHAVSTYRQMLHRGVRPDRHTLPRALSASRLSADLSLGKQLHGHALKFSCTNDRFVIAAL 127

Query: 451 XXXXXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDS 272
                   + D A  +       +   WT++   ++   +P  AL +FD M+ES A++D+
Sbjct: 128 IELYGRLQSVDTAKWVFDKSNVKDLVSWTMIARLYIAEGKPRMALDMFDGMVESGAEIDA 187

Query: 271 VALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEG 92
           VALATAA ACG  +S+ D  +VH V + RG   DVLV N++ KMYI+CG + +A A+F+ 
Sbjct: 188 VALATAAGACGLLKSMTDGMKVHRVAKERGLEFDVLVSNSLSKMYIDCGCVEDARAIFDQ 247

Query: 91  MGARDLVTWTTMANGHVRSGGFNEGLKLLR 2
             A+D+++WT M   +V+ GGFNEGLKL R
Sbjct: 248 RPAKDVISWTEMIRVYVKKGGFNEGLKLFR 277



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 38/138 (27%), Positives = 72/138 (52%)
 Frame = -1

Query: 415 ASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGR 236
           A ++   +P  +   WT ++  ++K+      LKLF +M+      D +++++   AC R
Sbjct: 241 ARAIFDQRPAKDVISWTEMIRVYVKKGGFNEGLKLFRQMIADGLKPDQLSVSSVLPACAR 300

Query: 235 SRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTM 56
             + +  + +H  + R G   ++ V NA++ MYI+ G I  AS +F G+  +D+V+ T M
Sbjct: 301 VSANKQGKEIHGYLLRNGIHMNLTVQNALMDMYIKSGFIECASKIFAGLKNKDVVSCTVM 360

Query: 55  ANGHVRSGGFNEGLKLLR 2
             G+   G  + G+ L R
Sbjct: 361 ILGYSLHGQGHLGVDLFR 378


>ref|XP_021280753.1| pentatricopeptide repeat-containing protein DOT4,
           chloroplastic-like [Herrania umbratica]
          Length = 681

 Score =  145 bits (365), Expect = 1e-36
 Identities = 77/209 (36%), Positives = 114/209 (54%)
 Frame = -1

Query: 628 QTLLFFRSMLLSGVLPDSHXXXXXXXXXXXXPNPNLPSQIHALALKLRLLSNPXXXXXXX 449
           Q L  +  M+L GV PD H             N +   Q+HA A KL   S+        
Sbjct: 70  QVLSVYHGMMLRGVRPDEHTLPRVLTASRLCTNLSFGKQVHAHAFKLGFSSDLYVITALM 129

Query: 448 XXXXXXHTPDVASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSV 269
                 H  D A  +L + P TN   WT+L    L  ++P  A ++FD+ML   AD+D +
Sbjct: 130 EMYGRLHGVDAAKWVLDNAPNTNSVAWTILAKLSLIDNKPHLAFEIFDQMLRLKADIDPI 189

Query: 268 ALATAAKACGRSRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGM 89
            LATA  AC   +S++ AR VH++ R  GF   +LV N+++KMY++C  + EA + F+ M
Sbjct: 190 GLATAIGACSLLKSLQQARNVHQIARDCGFEFHLLVSNSLLKMYVDCDGLEEARSFFDAM 249

Query: 88  GARDLVTWTTMANGHVRSGGFNEGLKLLR 2
            ++D+++WT M  G+V+ GG+NEGLKL R
Sbjct: 250 PSKDVISWTEMIRGYVKKGGYNEGLKLFR 278



 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 42/136 (30%), Positives = 69/136 (50%)
 Frame = -1

Query: 415 ASSLLTSQPCTNPTCWTVLLDSHLKRSEPEHALKLFDKMLESDADLDSVALATAAKACGR 236
           A S   + P  +   WT ++  ++K+      LKLF +M+ +    DS+ +++   AC R
Sbjct: 242 ARSFFDAMPSKDVISWTEMIRGYVKKGGYNEGLKLFRRMIRAGIKPDSLTISSILPACAR 301

Query: 235 SRSVRDARRVHEVVRRRGFLEDVLVGNAVVKMYIECGRIGEASAVFEGMGARDLVTWTTM 56
             + +  + +H  + R G   +  V NA++ MY++ G I  AS VF  M  RD+V+WT M
Sbjct: 302 VPAHKQGKELHAYLFRNGIDLNPTVQNAIMDMYVKSGFIELASTVFMCMMERDIVSWTIM 361

Query: 55  ANGHVRSGGFNEGLKL 8
             G+   G    GL L
Sbjct: 362 ILGYSLHGQGGRGLDL 377