BLASTX nr result
ID: Ophiopogon27_contig00013889
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00013889
(419 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020260133.1| sm-like protein LSM7 isoform X2 [Asparagus o... 109 2e-28
ref|XP_012065535.1| sm-like protein LSM7 [Jatropha curcas] >gi|6... 107 9e-28
ref|XP_012473248.1| PREDICTED: sm-like protein LSM7 [Gossypium r... 107 1e-27
ref|XP_011025065.1| PREDICTED: U6 snRNA-associated Sm-like prote... 107 1e-27
ref|XP_007218644.1| sm-like protein LSM7 [Prunus persica] >gi|64... 107 1e-27
ref|XP_002299952.1| small nuclear ribonucleoprotein [Populus tri... 107 1e-27
ref|XP_022948303.1| sm-like protein LSM7 [Cucurbita moschata] >g... 107 2e-27
gb|PIN18760.1| Small Nuclear ribonucleoprotein splicing factor [... 107 2e-27
ref|XP_019180690.1| PREDICTED: sm-like protein LSM7 [Ipomoea nil... 107 2e-27
ref|XP_008782900.1| PREDICTED: sm-like protein LSM7 [Phoenix dac... 107 2e-27
ref|XP_017969315.1| PREDICTED: sm-like protein LSM7 [Theobroma c... 107 2e-27
ref|XP_023891077.1| sm-like protein LSM7 [Quercus suber] >gi|133... 107 2e-27
gb|OVA11180.1| Ribonucleoprotein LSM domain [Macleaya cordata] 106 2e-27
ref|XP_017188657.1| PREDICTED: sm-like protein LSM7 [Malus domes... 107 2e-27
gb|OMO69793.1| hypothetical protein CCACVL1_19268 [Corchorus cap... 107 2e-27
ref|XP_022934168.1| sm-like protein LSM7 [Cucurbita moschata] >g... 106 3e-27
ref|XP_022734439.1| sm-like protein LSM7 [Durio zibethinus] >gi|... 106 3e-27
ref|XP_021865597.1| sm-like protein LSM7 [Spinacia oleracea] >gi... 106 3e-27
ref|XP_010928862.1| PREDICTED: sm-like protein LSM7 [Elaeis guin... 106 3e-27
ref|XP_010036102.1| PREDICTED: sm-like protein LSM7 [Eucalyptus ... 106 3e-27
>ref|XP_020260133.1| sm-like protein LSM7 isoform X2 [Asparagus officinalis]
gb|ONK81825.1| uncharacterized protein A4U43_C01F33250 [Asparagus officinalis]
Length = 99
Score = 109 bits (273), Expect = 2e-28
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA
Sbjct: 47 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 99
>ref|XP_012065535.1| sm-like protein LSM7 [Jatropha curcas]
gb|KDP43450.1| hypothetical protein JCGZ_16737 [Jatropha curcas]
Length = 99
Score = 107 bits (268), Expect = 9e-28
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVE+LRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEYLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>ref|XP_012473248.1| PREDICTED: sm-like protein LSM7 [Gossypium raimondii]
ref|XP_016703549.1| PREDICTED: sm-like protein LSM7 [Gossypium hirsutum]
ref|XP_017624210.1| PREDICTED: sm-like protein LSM7 [Gossypium arboreum]
gb|KJB22228.1| hypothetical protein B456_004G036100 [Gossypium raimondii]
Length = 99
Score = 107 bits (267), Expect = 1e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEFLRDQDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>ref|XP_011025065.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Populus
euphratica]
ref|XP_011025066.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Populus
euphratica]
ref|XP_011042170.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Populus
euphratica]
Length = 99
Score = 107 bits (267), Expect = 1e-27
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD+DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99
>ref|XP_007218644.1| sm-like protein LSM7 [Prunus persica]
ref|XP_008231310.1| PREDICTED: sm-like protein LSM7 [Prunus mume]
ref|XP_008349998.1| PREDICTED: sm-like protein LSM7 isoform X1 [Malus domestica]
ref|XP_008344634.1| PREDICTED: sm-like protein LSM7 isoform X1 [Malus domestica]
ref|XP_009354710.1| PREDICTED: sm-like protein LSM7 [Pyrus x bretschneideri]
ref|XP_009365005.1| PREDICTED: sm-like protein LSM7 [Pyrus x bretschneideri]
ref|XP_020413953.1| sm-like protein LSM7 [Prunus persica]
ref|XP_021822824.1| sm-like protein LSM7 [Prunus avium]
ref|XP_021822825.1| sm-like protein LSM7 [Prunus avium]
ref|XP_024176653.1| sm-like protein LSM7 [Rosa chinensis]
gb|ONI20338.1| hypothetical protein PRUPE_2G010100 [Prunus persica]
gb|PRQ54551.1| putative sm-like protein Lsm7 [Rosa chinensis]
Length = 99
Score = 107 bits (267), Expect = 1e-27
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF QPDGA
Sbjct: 47 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFSQPDGA 99
>ref|XP_002299952.1| small nuclear ribonucleoprotein [Populus trichocarpa]
ref|XP_002313290.1| small nuclear ribonucleoprotein [Populus trichocarpa]
ref|XP_006369638.1| hypothetical protein POPTR_0001s27630g [Populus trichocarpa]
ref|XP_011007336.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Populus
euphratica]
ref|XP_017234905.1| PREDICTED: sm-like protein LSM7 [Daucus carota subsp. sativus]
gb|ABK93714.1| unknown [Populus trichocarpa]
gb|KZN05462.1| hypothetical protein DCAR_006299 [Daucus carota subsp. sativus]
gb|PNT19940.1| hypothetical protein POPTR_009G064000v3 [Populus trichocarpa]
gb|PNT56872.1| hypothetical protein POPTR_001G269500v3 [Populus trichocarpa]
gb|PNT56874.1| hypothetical protein POPTR_001G269500v3 [Populus trichocarpa]
Length = 99
Score = 107 bits (267), Expect = 1e-27
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD+DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEFLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99
>ref|XP_022948303.1| sm-like protein LSM7 [Cucurbita moschata]
ref|XP_022948305.1| sm-like protein LSM7 [Cucurbita moschata]
ref|XP_022998506.1| sm-like protein LSM7 [Cucurbita maxima]
ref|XP_022998508.1| sm-like protein LSM7 [Cucurbita maxima]
ref|XP_023525746.1| sm-like protein LSM7 [Cucurbita pepo subsp. pepo]
ref|XP_023525747.1| sm-like protein LSM7 [Cucurbita pepo subsp. pepo]
Length = 99
Score = 107 bits (266), Expect = 2e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSP DGTDEIANPF+QPDGA
Sbjct: 47 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGA 99
>gb|PIN18760.1| Small Nuclear ribonucleoprotein splicing factor [Handroanthus
impetiginosus]
Length = 99
Score = 107 bits (266), Expect = 2e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEFLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>ref|XP_019180690.1| PREDICTED: sm-like protein LSM7 [Ipomoea nil]
ref|XP_019180691.1| PREDICTED: sm-like protein LSM7 [Ipomoea nil]
ref|XP_019158914.1| PREDICTED: sm-like protein LSM7 [Ipomoea nil]
Length = 99
Score = 107 bits (266), Expect = 2e-27
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
A+E+LRDSDDPLKTTDQTRRLGLIVCRGTAVMLV+PTDGTDEIANPFLQPDGA
Sbjct: 47 AIEYLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVAPTDGTDEIANPFLQPDGA 99
>ref|XP_008782900.1| PREDICTED: sm-like protein LSM7 [Phoenix dactylifera]
ref|XP_017697097.1| PREDICTED: sm-like protein LSM7 [Phoenix dactylifera]
Length = 99
Score = 107 bits (266), Expect = 2e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEFLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 99
>ref|XP_017969315.1| PREDICTED: sm-like protein LSM7 [Theobroma cacao]
ref|XP_017969318.1| PREDICTED: sm-like protein LSM7 [Theobroma cacao]
ref|XP_021281100.1| sm-like protein LSM7 [Herrania umbratica]
gb|EOX96719.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 99
Score = 107 bits (266), Expect = 2e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEFLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>ref|XP_023891077.1| sm-like protein LSM7 [Quercus suber]
gb|POE62342.1| sm-like protein lsm7 [Quercus suber]
Length = 100
Score = 107 bits (266), Expect = 2e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 48 AVEFLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 100
>gb|OVA11180.1| Ribonucleoprotein LSM domain [Macleaya cordata]
Length = 88
Score = 106 bits (265), Expect = 2e-27
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
A+EFLRD DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 36 AIEFLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 88
>ref|XP_017188657.1| PREDICTED: sm-like protein LSM7 [Malus domestica]
Length = 113
Score = 107 bits (267), Expect = 2e-27
Identities = 52/53 (98%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF QPDGA
Sbjct: 61 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFSQPDGA 113
>gb|OMO69793.1| hypothetical protein CCACVL1_19268 [Corchorus capsularis]
gb|OMO80841.1| hypothetical protein COLO4_23915 [Corchorus olitorius]
Length = 102
Score = 107 bits (266), Expect = 2e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 50 AVEFLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 102
>ref|XP_022934168.1| sm-like protein LSM7 [Cucurbita moschata]
ref|XP_023526539.1| sm-like protein LSM7 [Cucurbita pepo subsp. pepo]
Length = 99
Score = 106 bits (265), Expect = 3e-27
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
A+EFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSP DGTDEIANPF+QPDGA
Sbjct: 47 AIEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGA 99
>ref|XP_022734439.1| sm-like protein LSM7 [Durio zibethinus]
ref|XP_022734440.1| sm-like protein LSM7 [Durio zibethinus]
ref|XP_022734441.1| sm-like protein LSM7 [Durio zibethinus]
ref|XP_022734442.1| sm-like protein LSM7 [Durio zibethinus]
Length = 99
Score = 106 bits (265), Expect = 3e-27
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD DDP+KTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEFLRDQDDPMKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>ref|XP_021865597.1| sm-like protein LSM7 [Spinacia oleracea]
ref|XP_021865598.1| sm-like protein LSM7 [Spinacia oleracea]
Length = 99
Score = 106 bits (265), Expect = 3e-27
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVE+LRD+DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEYLRDADDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99
>ref|XP_010928862.1| PREDICTED: sm-like protein LSM7 [Elaeis guineensis]
Length = 99
Score = 106 bits (265), Expect = 3e-27
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
A+EFLRD DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AIEFLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGA 99
>ref|XP_010036102.1| PREDICTED: sm-like protein LSM7 [Eucalyptus grandis]
gb|KCW47621.1| hypothetical protein EUGRSUZ_K01365 [Eucalyptus grandis]
gb|KCW47622.1| hypothetical protein EUGRSUZ_K01365 [Eucalyptus grandis]
gb|KZV47240.1| hypothetical protein F511_07663 [Dorcoceras hygrometricum]
Length = 99
Score = 106 bits (265), Expect = 3e-27
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = -2
Query: 418 AVEFLRDSDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 260
AVEFLRD DDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPF+QPDGA
Sbjct: 47 AVEFLRDPDDPLKTTDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99