BLASTX nr result

ID: Ophiopogon27_contig00013399 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00013399
         (515 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIA29911.1| hypothetical protein AQUCO_05800175v1 [Aquilegia ...    74   3e-12
gb|OVA12978.1| hypothetical protein BVC80_1157g16 [Macleaya cord...    61   1e-07
ref|XP_010907241.1| PREDICTED: U11/U12 small nuclear ribonucleop...    58   1e-06
ref|XP_020242146.1| U11/U12 small nuclear ribonucleoprotein 48 k...    55   9e-06
ref|XP_020242145.1| U11/U12 small nuclear ribonucleoprotein 48 k...    55   9e-06

>gb|PIA29911.1| hypothetical protein AQUCO_05800175v1 [Aquilegia coerulea]
 gb|PIA29912.1| hypothetical protein AQUCO_05800175v1 [Aquilegia coerulea]
          Length = 675

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
 Frame = +3

Query: 21  NHKEEKNSGPRSPSIFRPHAILHDQFTHLSEQGDPRAHNSRFQKK--VSADNPRYNDY-I 191
           N K ++    RSP+ +R H + H++  H  + G+     S++ K   VS    +Y+D  +
Sbjct: 542 NKKRDREYRSRSPNKYRSHGLSHEKHRHRRDHGEMEKTRSKYDKNDSVSPHRSKYHDSRL 601

Query: 192 NKSTSKPARDIANHGHKPLSEARSVYGGRTE-SFNSKSVTASAFEDRYDPSASYEECDDG 368
             S S P+ D  +  +  +SE +  Y GRT  S  S+SVT S FEDRYDPS S    DDG
Sbjct: 602 FSSVSNPSTDSKDRKYDSMSERKDQYRGRTYGSRRSESVTQSMFEDRYDPSESDSRYDDG 661


>gb|OVA12978.1| hypothetical protein BVC80_1157g16 [Macleaya cordata]
          Length = 806

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
 Frame = +3

Query: 24   HKEEKNSGPRSPSIFRPHAILHDQFTHLSEQGDPRAHNSRFQK--KVSADNPRYNDYIN- 194
            +K+EK  G RSP  +R H   H+   H  E+ +     S++ K   VS+   RY D  + 
Sbjct: 669  NKQEKEYGSRSPERYRSHGS-HEHHRHRRERDEREGSRSKYNKGGSVSSHRSRYRDSRSF 727

Query: 195  KSTSKPARDIANHGHKPLSEARSVYGGRTES-FNSKSVTASAFEDRYDPSASYEECDD 365
             S S  A D++   +  +SE    + GRT     S+SV  +A EDRYDPS S    +D
Sbjct: 728  SSVSNLASDLSEGKNDQISEVNDRHKGRTYGRHRSESVRQNAIEDRYDPSGSDNRYED 785


>ref|XP_010907241.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
           [Elaeis guineensis]
          Length = 767

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 47/126 (37%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
 Frame = +3

Query: 3   EGHERWNHKEEKNSGPRSPSIFRPHAILHDQFTHLSEQGDPRAHNSRFQKKVSADNPRYN 182
           E HE   HK E   G RSPS  R +A LHD+            + S  ++    D   +N
Sbjct: 608 EDHEGSKHKRENKYGSRSPSSHRNYAQLHDR------------NESHRERCGMVD---WN 652

Query: 183 DYINKSTSKP--ARDIANHGHKP-----LSEARSVYGGRT-ESFNSKSVTASAFEDRYDP 338
           D    STSK   +R      H       +SE +S    RT ES  ++SVT  AF DRYDP
Sbjct: 653 DTSYSSTSKERFSRSTLTSKHSKKEYDYISENKSKERARTSESHRAESVTQDAFGDRYDP 712

Query: 339 SASYEE 356
           S+SY+E
Sbjct: 713 SSSYDE 718


>ref|XP_020242146.1| U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2
           [Asparagus officinalis]
 gb|ONK60771.1| uncharacterized protein A4U43_C08F22440 [Asparagus officinalis]
          Length = 627

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 26/46 (56%), Positives = 31/46 (67%)
 Frame = +3

Query: 3   EGHERWNHKEEKNSGPRSPSIFRPHAILHDQFTHLSEQGDPRAHNS 140
           EGH R  HK+EKN    +P+I +    L DQFTHL EQGD RAH+S
Sbjct: 582 EGHWRRKHKKEKNYWSENPTIAQKRTDLRDQFTHLGEQGDTRAHDS 627


>ref|XP_020242145.1| U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1
           [Asparagus officinalis]
          Length = 643

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 26/46 (56%), Positives = 31/46 (67%)
 Frame = +3

Query: 3   EGHERWNHKEEKNSGPRSPSIFRPHAILHDQFTHLSEQGDPRAHNS 140
           EGH R  HK+EKN    +P+I +    L DQFTHL EQGD RAH+S
Sbjct: 598 EGHWRRKHKKEKNYWSENPTIAQKRTDLRDQFTHLGEQGDTRAHDS 643


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