BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00012138
         (760 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020672506.1| pentatricopeptide repeat-containing protein ...   183   4e-51
ref|XP_020575206.1| pentatricopeptide repeat-containing protein ...   183   5e-51
gb|EOA34571.1| hypothetical protein CARUB_v10022126mg [Capsella ...   176   5e-49
gb|PKA49706.1| Pentatricopeptide repeat-containing protein [Apos...   177   8e-49
ref|XP_023643368.1| pentatricopeptide repeat-containing protein ...   176   1e-48
ref|XP_010526038.1| PREDICTED: pentatricopeptide repeat-containi...   173   2e-47
ref|XP_018831539.1| PREDICTED: pentatricopeptide repeat-containi...   171   1e-46
gb|PON47593.1| Pentatricopeptide repeat [Parasponia andersonii]       171   1e-46
ref|XP_010471588.1| PREDICTED: pentatricopeptide repeat-containi...   171   2e-46
ref|XP_010428486.1| PREDICTED: pentatricopeptide repeat-containi...   171   2e-46
ref|XP_010416349.1| PREDICTED: pentatricopeptide repeat-containi...   171   2e-46
ref|NP_177628.2| Pentatricopeptide repeat (PPR) superfamily prot...   170   2e-46
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi...   171   2e-46
gb|PON86084.1| Tetratricopeptide-like helical domain containing ...   171   2e-46
gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]   169   2e-46
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...   170   3e-46
ref|XP_024168961.1| pentatricopeptide repeat-containing protein ...   170   3e-46
ref|XP_020890022.1| pentatricopeptide repeat-containing protein ...   169   4e-46
dbj|BAD44503.1| hypothetical protein, partial [Arabidopsis thali...   168   6e-46
ref|XP_015882771.1| PREDICTED: pentatricopeptide repeat-containi...   169   8e-46

>ref|XP_020672506.1| pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Dendrobium catenatum]
 gb|PKU73246.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 505

 Score =  183 bits (465), Expect = 4e-51
 Identities = 103/218 (47%), Positives = 127/218 (58%), Gaps = 3/218 (1%)
 Frame = +2

Query: 116 IASIVLAHSPAATSPKTLSLALVPHLPNLTPSAIDRVLKLLWNDGPRAXXXXXXXXXXXX 295
           I+++VL HS  A S      +  P  P+L+PS ID VLK LWNDGPRA            
Sbjct: 45  ISNLVLTHSSTAASLAAALSSSFPS-PSLSPSIIDAVLKRLWNDGPRALIFFRALLRLPF 103

Query: 296 XXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXX---FSVLAERFASHGKPDRAV 466
                             +                       FSVLAERFA+ GKPDRAV
Sbjct: 104 FSPSASSFDYAIDIAARLRDRGSLRFLLSARQAAGLPLSHRTFSVLAERFANAGKPDRAV 163

Query: 467 RFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALRGRFGADTVSYNAIAEGWC 646
           R FL+LH  GC QD+  FN+LLDVL KS RV KA  L  + + RFGAD +++N +AEGWC
Sbjct: 164 RLFLSLHHQGCRQDIRIFNSLLDVLCKSRRVRKATFLFNSFKSRFGADAITFNILAEGWC 223

Query: 647 RVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R+KRTA A++V+KEMV+ G+EP+L TYNILLKGYFRAG
Sbjct: 224 RLKRTATALDVLKEMVDSGLEPTLTTYNILLKGYFRAG 261



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
 Frame = +2

Query: 446 GKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RALRGRFGADTVSY 622
           G+ + A + F  + + GC   + T+N L+ VL K   ++ A  +    LR  +  +  +Y
Sbjct: 302 GQTENARKVFDEMIVEGCLPSVATYNALIQVLCKKDCIQNALSVFDEMLRRGYTPNVTTY 361

Query: 623 NAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           N +  G C      RA+E M  M + G  P++ TYN++++ +   G
Sbjct: 362 NVLIRGLCHGSEMGRAMEFMDRMRQEGCRPNVQTYNVVIRHWCEEG 407


>ref|XP_020575206.1| pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Phalaenopsis equestris]
          Length = 499

 Score =  183 bits (464), Expect = 5e-51
 Identities = 104/220 (47%), Positives = 131/220 (59%), Gaps = 5/220 (2%)
 Frame = +2

Query: 116 IASIVLAHS--PAATSPKTLSLALVPHLPNLTPSAIDRVLKLLWNDGPRAXXXXXXXXXX 289
           I+++VL HS  PAA +  TLS +    +P  +PS ID VLK LWNDGP A          
Sbjct: 39  ISNLVLTHSSTPAALT-STLSSSFP--IPTFSPSIIDAVLKRLWNDGPHALLFFRALLRL 95

Query: 290 XXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXX---FSVLAERFASHGKPDR 460
                               +                       FS+LAERFA+ GKPDR
Sbjct: 96  PSFSPTASSFDHAIDIAARLRDRGSLRFLLSARNAAHLPLSHRTFSLLAERFANAGKPDR 155

Query: 461 AVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALRGRFGADTVSYNAIAEG 640
           AVR FL+LH HGC QDL  FN+LLDVL KS RV KA  L ++ + RFGAD +++N +AEG
Sbjct: 156 AVRLFLSLHHHGCRQDLRVFNSLLDVLCKSRRVRKATSLFKSFKSRFGADAITFNILAEG 215

Query: 641 WCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           WCR+KRTA A++V+KEMV+ G+EP+L TYNILLKG+FRAG
Sbjct: 216 WCRLKRTANALDVLKEMVDSGLEPTLTTYNILLKGFFRAG 255


>gb|EOA34571.1| hypothetical protein CARUB_v10022126mg [Capsella rubella]
          Length = 451

 Score =  176 bits (447), Expect = 5e-49
 Identities = 81/116 (69%), Positives = 99/116 (85%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AERFAS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 127 FAIVAERFASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 186

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRFGADTV+YN I  GWC +KRT +A+EV+KEMVE G++P+L TYN +LKG+FRAG
Sbjct: 187 GRFGADTVTYNVIVNGWCLIKRTPKALEVLKEMVERGIDPNLTTYNTMLKGFFRAG 242



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+   A  FFL +    C  D+ T+ T++     +G +++A  +    +
Sbjct: 231 YNTMLKGFFRAGQIRHAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 290

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA+ +  C+      AV + ++MV  G EP++ TYN+L++G F AG
Sbjct: 291 REGVLPSVATYNAMIQVLCKKDCVENAVVMFEDMVRKGYEPNVTTYNVLIRGLFHAG 347


>gb|PKA49706.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 521

 Score =  177 bits (450), Expect = 8e-49
 Identities = 102/229 (44%), Positives = 131/229 (57%), Gaps = 14/229 (6%)
 Frame = +2

Query: 116 IASIVLAHSPAATS---------PKTLSLALVPHLP--NLTPSAIDRVLKLLWNDGPRAX 262
           I+ +V+ HSP A S          +TL+LAL       +L+P+ +D VLK LWNDGPRA 
Sbjct: 49  ISILVINHSPTAASGGAGASDGDAETLALALSSSFSILSLSPAIVDSVLKRLWNDGPRAL 108

Query: 263 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXX---FSVLAER 433
                                        +                       F++LAER
Sbjct: 109 LFFRALLLLPGFSHAPSSFDHALDIAARLRDRRSIHLLLSDRRRAGLPLSHRTFAILAER 168

Query: 434 FASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALRGRFGADT 613
           FA+ GKPD AVR FL+LH HGC QD  +FN LLDVL K+ RV KA  L R+L GRF AD 
Sbjct: 169 FAAAGKPDSAVRLFLSLHHHGCRQDTNSFNILLDVLCKTRRVRKAASLFRSLNGRFRADA 228

Query: 614 VSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           V+YN +A+GWCRVKRTA A++V+KEMV+ G+EP+L T+NILLKG+FR+G
Sbjct: 229 VTYNILADGWCRVKRTAAALDVLKEMVDSGLEPTLTTHNILLKGFFRSG 277



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
 Frame = +2

Query: 446 GKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALRGR-FGADTVSY 622
           G+ ++A + F  +  HGC   + T+N L+ VL K   +  A  +   +  R +  +  +Y
Sbjct: 318 GQTEKARKVFDEMIAHGCLPSVATYNALIQVLCKKNEIHSALKVFDEMLSRGYTPNVTTY 377

Query: 623 NAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           N +  G C      RA+  M+ M   G EP++ TYN++++ +   G
Sbjct: 378 NVVIRGLCHAGEMERAMGFMEAMRSEGSEPTVQTYNLVIRHWCEEG 423


>ref|XP_023643368.1| pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Capsella rubella]
          Length = 480

 Score =  176 bits (447), Expect = 1e-48
 Identities = 81/116 (69%), Positives = 99/116 (85%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AERFAS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 127 FAIVAERFASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 186

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRFGADTV+YN I  GWC +KRT +A+EV+KEMVE G++P+L TYN +LKG+FRAG
Sbjct: 187 GRFGADTVTYNVIVNGWCLIKRTPKALEVLKEMVERGIDPNLTTYNTMLKGFFRAG 242



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+   A  FFL +    C  D+ T+ T++     +G +++A  +    +
Sbjct: 231 YNTMLKGFFRAGQIRHAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 290

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA+ +  C+      AV + ++MV  G EP++ TYN+L++G F AG
Sbjct: 291 REGVLPSVATYNAMIQVLCKKDCVENAVVMFEDMVRKGYEPNVTTYNVLIRGLFHAG 347


>ref|XP_010526038.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Tarenaya hassleriana]
          Length = 483

 Score =  173 bits (439), Expect = 2e-47
 Identities = 80/116 (68%), Positives = 97/116 (83%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           FS++AER+AS GKPDRAV+ FLN+H HGC QDL++FNT+LD+L KS RVEKAYGL RALR
Sbjct: 130 FSIVAERYASAGKPDRAVKLFLNMHEHGCFQDLSSFNTILDLLCKSKRVEKAYGLFRALR 189

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRF  D V+YN I  GWC VKRT +A+EV+KEMVE G+ P+L TYN +LKG+FRAG
Sbjct: 190 GRFSVDVVTYNVIVNGWCLVKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 245



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+ D+A +FFL +       D+ T+ T++     +G +++A  +    +
Sbjct: 234 YNTMLKGFFRAGQVDQAWKFFLEMKKRKREIDVITYTTVVHGFGVAGEIKRARNVFDEMI 293

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA+ +  C+      A+ V +EM   G EP++ TYN+L++G   AG
Sbjct: 294 REGVLPSVATYNALIQVLCKKDSVENAIVVFEEMSRKGYEPNVTTYNVLIRGLCHAG 350



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRAL- 589
           ++ +   F   G+  RA   F  +   G    + T+N L+ VL K   VE A  +   + 
Sbjct: 269 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNALIQVLCKKDSVENAIVVFEEMS 328

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLK 742
           R  +  +  +YN +  G C   +  R+VE+M+ M + G EP++ TYNI+++
Sbjct: 329 RKGYEPNVTTYNVLIRGLCHAGQFDRSVELMQRMKKEGCEPNVQTYNIMIR 379


>ref|XP_018831539.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Juglans regia]
 ref|XP_018831540.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Juglans regia]
          Length = 497

 Score =  171 bits (434), Expect = 1e-46
 Identities = 93/215 (43%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
 Frame = +2

Query: 128 VLAHSPAATSPKTLSLALVPHLPNLTPSAIDRVLKLLWNDGPRAXXXXXXXXXXXXXXXX 307
           ++A     + P+TL+  LV      TP   D VLK LWN GP+A                
Sbjct: 45  IIAKLILCSDPRTLTQTLVDPTIQWTPELADSVLKRLWNHGPKAIHFFRTLDRHHPTFAH 104

Query: 308 XXXXXXXXXXXXXX----KXXXXXXXXXXXXXXXXXXXXFSVLAERFASHGKPDRAVRFF 475
                             K                    F+++AER+ + GKPDRAV+ F
Sbjct: 105 SSSSFDLAIDIAARMRDYKAVWALVARMRNRRLGPGPKTFAIIAERYVAAGKPDRAVKLF 164

Query: 476 LNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALRGRFGADTVSYNAIAEGWCRVK 655
           L++H HGC QDL +FNT+LDVL KS RVE AY L +AL+GRF  D VSYN I+ GWC +K
Sbjct: 165 LSMHEHGCFQDLNSFNTILDVLCKSKRVEMAYNLFKALKGRFKVDCVSYNIISNGWCLIK 224

Query: 656 RTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           RT +A+EV+KEMVE G+EPSL T+N +LKGY RAG
Sbjct: 225 RTPKALEVLKEMVERGLEPSLTTFNTMLKGYVRAG 259


>gb|PON47593.1| Pentatricopeptide repeat [Parasponia andersonii]
          Length = 494

 Score =  171 bits (433), Expect = 1e-46
 Identities = 98/220 (44%), Positives = 120/220 (54%), Gaps = 5/220 (2%)
 Frame = +2

Query: 116 IASIVLAHSPAATSPKTLSLALVPHLPNL--TPSAIDRVLKLLWNDGPRAXXXXXXXXXX 289
           +A +VL   P A  PK+L      H P +  TP  +DR LK LWN GP+A          
Sbjct: 45  MADLVLKSDPEAL-PKSL------HNPTVEWTPYLVDRTLKRLWNHGPKALQFFKVLDRH 97

Query: 290 XXXXXXXXXXXXXXXXXXXX---KXXXXXXXXXXXXXXXXXXXXFSVLAERFASHGKPDR 460
                                  K                    F+++AER+ + GKPDR
Sbjct: 98  PNYAHSSSSFDHAIDIAARLRDYKTVWTLVARMRSCRLGPGPKTFAIIAERYVAAGKPDR 157

Query: 461 AVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALRGRFGADTVSYNAIAEG 640
           AV+ FL++H HGC QDL +FN  LDVL KS RVEKAY LLR  R +F  D VSYN IA G
Sbjct: 158 AVKVFLSMHEHGCPQDLNSFNAFLDVLCKSNRVEKAYNLLRVFRSKFKVDVVSYNIIANG 217

Query: 641 WCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           WC +KRT +A+EV+ EMVE G+ PSL TYNI+LKGYFRAG
Sbjct: 218 WCLIKRTPKALEVLAEMVERGLNPSLTTYNIMLKGYFRAG 257


>ref|XP_010471588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Camelina sativa]
          Length = 481

 Score =  171 bits (432), Expect = 2e-46
 Identities = 78/116 (67%), Positives = 97/116 (83%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AER+AS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 128 FAIVAERYASTGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 187

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRF ADTV+YN I  GWC +KRT +A+EV+KEMVE G+ P+L TYN +LKG+FR+G
Sbjct: 188 GRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRSG 243



 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+  +A  FFL +    C  D+ T+ T++     +G + +A  +    +
Sbjct: 232 YNTMLKGFFRSGQIRQAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEINRARNVFDEMI 291

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA+ +  C+      AV + +EMV  G EP++ TYN+L++G F AG
Sbjct: 292 REGVLPSVATYNAMIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAG 348


>ref|XP_010428486.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Camelina sativa]
          Length = 481

 Score =  171 bits (432), Expect = 2e-46
 Identities = 78/116 (67%), Positives = 97/116 (83%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AER+AS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 128 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 187

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRF ADTV+YN I  GWC +KRT +A+EV+KEMVE G+ P+L TYN +LKG+FR+G
Sbjct: 188 GRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRSG 243



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+  +A  FFL +    C  D+ T+ T++     +G + +A  +    +
Sbjct: 232 YNTMLKGFFRSGQIRQAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEINRARNVFDEMI 291

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA+ +  C+      AV + +EMV  G EP++ TYN+L++G F +G
Sbjct: 292 REGVLPSVATYNAMIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHSG 348


>ref|XP_010416349.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Camelina sativa]
          Length = 481

 Score =  171 bits (432), Expect = 2e-46
 Identities = 78/116 (67%), Positives = 97/116 (83%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AER+AS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 128 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 187

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRF ADTV+YN I  GWC +KRT +A+EV+KEMVE G+ P+L TYN +LKG+FR+G
Sbjct: 188 GRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRSG 243



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+  +A  FFL +    C  D+ T+ T++     +G + +A  +    +
Sbjct: 232 YNTMLKGFFRSGQIRQAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEINRARNVFDEMI 291

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA+ +  C+      AV + ++MV  G EP++ TYN+L++G F AG
Sbjct: 292 REGVLPSVATYNAMIQVLCKKDSVENAVVMFEDMVRKGYEPNVTTYNVLIRGLFHAG 348


>ref|NP_177628.2| Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
           thaliana]
 gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
 gb|AEE35645.1| Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
           thaliana]
          Length = 453

 Score =  170 bits (430), Expect = 2e-46
 Identities = 78/116 (67%), Positives = 96/116 (82%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AER+AS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 129 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 188

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRF  DTV+YN I  GWC +KRT +A+EV+KEMVE G+ P+L TYN +LKG+FRAG
Sbjct: 189 GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244



 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+   A  FFL +    C  D+ T+ T++     +G +++A  +    +
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA+ +  C+      AV + +EMV  G EP++ TYN+L++G F AG
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349


>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  171 bits (432), Expect = 2e-46
 Identities = 91/202 (45%), Positives = 117/202 (57%), Gaps = 5/202 (2%)
 Frame = +2

Query: 170 SLALVPHLPNL--TPSAIDRVLKLLWNDGPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
           SL  + H PN+  TP ++++ LK LWN GP+A                            
Sbjct: 51  SLTRILHDPNIHWTPDSVNKTLKRLWNHGPKALLFFKTLDRHPTYTHSSSSYDHAVDIAG 110

Query: 344 XX---KXXXXXXXXXXXXXXXXXXXXFSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLT 514
                K                    F+++AER+ + GKPDRAV+ FL++H HGC QDL 
Sbjct: 111 RLRDYKSLWAFVARMRALRVGPAPRTFAIIAERYVAAGKPDRAVKVFLSMHEHGCPQDLN 170

Query: 515 TFNTLLDVLAKSGRVEKAYGLLRALRGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMV 694
           +FNT+LDVL K+ RVEKAY L +  RGRF AD VSYN I  GWC +KRT +A+EV++EMV
Sbjct: 171 SFNTVLDVLCKAKRVEKAYNLFKVFRGRFRADCVSYNVIVNGWCLIKRTPKALEVLREMV 230

Query: 695 ELGMEPSLNTYNILLKGYFRAG 760
           E G+EPSL TYNI+LKGY RAG
Sbjct: 231 ERGIEPSLVTYNIMLKGYLRAG 252


>gb|PON86084.1| Tetratricopeptide-like helical domain containing protein [Trema
           orientalis]
          Length = 494

 Score =  171 bits (432), Expect = 2e-46
 Identities = 98/220 (44%), Positives = 119/220 (54%), Gaps = 5/220 (2%)
 Frame = +2

Query: 116 IASIVLAHSPAATSPKTLSLALVPHLPNL--TPSAIDRVLKLLWNDGPRAXXXXXXXXXX 289
           +A +VL   P A  P TL      H P +  TP  +DR LK LWN GP+A          
Sbjct: 45  MADLVLKSDPEAL-PNTL------HNPTVEWTPYLVDRTLKRLWNHGPKALQFFKVLDRH 97

Query: 290 XXXXXXXXXXXXXXXXXXXX---KXXXXXXXXXXXXXXXXXXXXFSVLAERFASHGKPDR 460
                                  K                    F+++AER+ + GKPDR
Sbjct: 98  PNYVHSSSSFDHAIDIAARLRDYKTVWTLVARMRSRRLGPGPKTFAIIAERYVAAGKPDR 157

Query: 461 AVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALRGRFGADTVSYNAIAEG 640
           AV+ FL++H HGC QDL +FN  LDVL KS RVEKAY LLR  R +F  D VSYN IA G
Sbjct: 158 AVKVFLSMHEHGCPQDLNSFNAFLDVLCKSNRVEKAYNLLRVFRSKFKVDVVSYNIIANG 217

Query: 641 WCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           WC +KRT +A+EV+ EMVE G+ PSL TYNI+LKGYFRAG
Sbjct: 218 WCLIKRTPKALEVLAEMVERGLNPSLTTYNIMLKGYFRAG 257



 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           ++++ + +   G+   A  FF  +    C  D+ T+ TL+      G ++KA  +   + 
Sbjct: 246 YNIMLKGYFRAGQTKEAWEFFQEMKRRECEIDVVTYTTLVHGFGVVGEIKKARKIFDEMV 305

Query: 593 GRFGADTVS-YNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           G+    +V+ YNA+ +  C+      AV V +EMV  G  P+  TY +L++G   AG
Sbjct: 306 GKGVLPSVATYNALIQVLCKKDSVENAVVVFEEMVRKGYVPNSTTYTVLIRGLCHAG 362


>gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  169 bits (429), Expect = 2e-46
 Identities = 77/116 (66%), Positives = 97/116 (83%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AER+AS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 127 FAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 186

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRF ADTV+YN I  GWC +KRT +A+EV+KEMV+ G+ P+L TYN +L+G+FRAG
Sbjct: 187 GRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAG 242



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+  +A  FFL +    C  D+ T+ T++     +G +++   +    +
Sbjct: 231 YNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMI 290

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA  +  C+      AV + +EMV  G EP++ TYN+L++G F AG
Sbjct: 291 REGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAG 347


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor
 gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
 gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
 gb|OAP13543.1| OTP43 [Arabidopsis thaliana]
          Length = 482

 Score =  170 bits (430), Expect = 3e-46
 Identities = 78/116 (67%), Positives = 96/116 (82%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AER+AS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 129 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 188

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRF  DTV+YN I  GWC +KRT +A+EV+KEMVE G+ P+L TYN +LKG+FRAG
Sbjct: 189 GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244



 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+   A  FFL +    C  D+ T+ T++     +G +++A  +    +
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA+ +  C+      AV + +EMV  G EP++ TYN+L++G F AG
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349


>ref|XP_024168961.1| pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Rosa chinensis]
 gb|PRQ16030.1| putative tetratricopeptide-like helical domain-containing protein
           [Rosa chinensis]
          Length = 487

 Score =  170 bits (430), Expect = 3e-46
 Identities = 90/202 (44%), Positives = 117/202 (57%), Gaps = 5/202 (2%)
 Frame = +2

Query: 170 SLALVPHLPNL--TPSAIDRVLKLLWNDGPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
           SL  + H PN+  TP ++++ LK LWN GP+A                            
Sbjct: 49  SLPRILHDPNIHWTPDSVNKTLKRLWNHGPKALVFFKTLDRHPTYTHSSSSYDHAVDIAG 108

Query: 344 XX---KXXXXXXXXXXXXXXXXXXXXFSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLT 514
                K                    F+++AER+ + GKPDRAV+ FL++H HGC QDL 
Sbjct: 109 RLRDYKSLWAFVARMRARRVGPGPRTFAIIAERYVAAGKPDRAVKVFLSMHEHGCPQDLN 168

Query: 515 TFNTLLDVLAKSGRVEKAYGLLRALRGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMV 694
           +FNT+LDVL K+ RVEKAY L +  RGRF AD VSYN I  GWC +KRT +A+EV++EMV
Sbjct: 169 SFNTVLDVLCKAKRVEKAYNLFKVFRGRFRADCVSYNVIVNGWCLIKRTPKALEVLREMV 228

Query: 695 ELGMEPSLNTYNILLKGYFRAG 760
           E G+EPSL TYN++LKGY RAG
Sbjct: 229 ERGIEPSLVTYNVMLKGYLRAG 250



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           ++V+ + +   G+   A  FFL +    C  D+ T+ TL+      G V+KA  +   + 
Sbjct: 239 YNVMLKGYLRAGQVKEAWEFFLEMKKRKCEIDVVTYTTLVHGFGVVGEVKKARKIFDGMV 298

Query: 593 GRFGADTVS-YNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
                 +V+ YNA+ +  C+      AV V +EMV  G  P++ TYN+L++G   AG
Sbjct: 299 EEGVLPSVATYNALIQVLCKKDSVENAVVVFEEMVSKGYVPNVTTYNVLIRGLCHAG 355


>ref|XP_020890022.1| pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Arabidopsis lyrata subsp. lyrata]
          Length = 484

 Score =  169 bits (429), Expect = 4e-46
 Identities = 77/116 (66%), Positives = 97/116 (83%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AER+AS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 131 FAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 190

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRF ADTV+YN I  GWC +KRT +A+EV+KEMV+ G+ P+L TYN +L+G+FRAG
Sbjct: 191 GRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAG 246



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+  +A  FFL +    C  D+ T+ T++     +G +++   +    +
Sbjct: 235 YNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMI 294

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA  +  C+      AV + +EMV  G EP++ TYN+L++G F AG
Sbjct: 295 REGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAG 351


>dbj|BAD44503.1| hypothetical protein, partial [Arabidopsis thaliana]
          Length = 447

 Score =  168 bits (426), Expect = 6e-46
 Identities = 77/116 (66%), Positives = 95/116 (81%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLLRALR 592
           F+++AER+AS GKPD+AV+ FLN+H HGC QDL +FNT+LDVL KS RVEKAY L RALR
Sbjct: 123 FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR 182

Query: 593 GRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           GRF  DTV+YN I  GWC +KRT + +EV+KEMVE G+ P+L TYN +LKG+FRAG
Sbjct: 183 GRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAG 238



 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +2

Query: 413 FSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDVLAKSGRVEKAYGLL-RAL 589
           ++ + + F   G+   A  FFL +    C  D+ T+ T++     +G +++A  +    +
Sbjct: 227 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 286

Query: 590 RGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSLNTYNILLKGYFRAG 760
           R        +YNA+ +  C+      AV + +EMV  G EP++ TYN+L++G F AG
Sbjct: 287 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 343


>ref|XP_015882771.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial [Ziziphus jujuba]
          Length = 496

 Score =  169 bits (428), Expect = 8e-46
 Identities = 89/194 (45%), Positives = 114/194 (58%), Gaps = 5/194 (2%)
 Frame = +2

Query: 194 PNL--TPSAIDRVLKLLWNDGPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---KXX 358
           PN+  TP  +D VLK LWN GP+A                                 K  
Sbjct: 66  PNVEWTPDLVDSVLKRLWNHGPKALQFFKVLDHHPTYAHSSSSFNHAIDIAGRLRDYKTL 125

Query: 359 XXXXXXXXXXXXXXXXXXFSVLAERFASHGKPDRAVRFFLNLHLHGCNQDLTTFNTLLDV 538
                             F+++AER+ + GKPDRAV+ FL++H HGC QDL +FNT+LDV
Sbjct: 126 WTLVARMRTRRLGPSSKTFAIIAERYVAAGKPDRAVKVFLSMHEHGCPQDLNSFNTILDV 185

Query: 539 LAKSGRVEKAYGLLRALRGRFGADTVSYNAIAEGWCRVKRTARAVEVMKEMVELGMEPSL 718
           L KS RVEKAY L +  RGRF AD+VSYN IA GWC +KRT +A+EV++EM++ G+ P+L
Sbjct: 186 LCKSKRVEKAYNLFKVFRGRFKADSVSYNIIANGWCLIKRTPKALEVLEEMLKRGLNPNL 245

Query: 719 NTYNILLKGYFRAG 760
            TYNI+LKGYFRAG
Sbjct: 246 TTYNIMLKGYFRAG 259