BLASTX nr result

ID: Ophiopogon27_contig00011969 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00011969
         (436 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272999.1| protein IQ-DOMAIN 1-like [Asparagus officina...    55   6e-06

>ref|XP_020272999.1| protein IQ-DOMAIN 1-like [Asparagus officinalis]
 ref|XP_020273000.1| protein IQ-DOMAIN 1-like [Asparagus officinalis]
 gb|ONK65130.1| uncharacterized protein A4U43_C07F33990 [Asparagus officinalis]
          Length = 434

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/67 (46%), Positives = 37/67 (55%)
 Frame = -2

Query: 435 PARMDLQAKKRLSLQXXXXXXXXXXXXXXXXXXXXXAHKSVKESPKPEAKRNLHPADSIP 256
           P ++D QAKKRLSLQ                     A KS KE+ + E   NL+PADSIP
Sbjct: 368 PVQIDSQAKKRLSLQGNGGTTGKRTVNRILANRSANAQKSAKEAARSEVNHNLNPADSIP 427

Query: 255 KRVEIQT 235
           KRVE+QT
Sbjct: 428 KRVELQT 434


Top