BLASTX nr result
ID: Ophiopogon27_contig00011936
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00011936
(778 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEP33251.1| hypothetical protein, partial (chloroplast) [Posi... 67 1e-09
ref|YP_004769854.1| hypothetical chloroplast RF21 (chloroplast) ... 68 3e-09
gb|AEK94383.2| hypothetical chloroplast RF21 (chloroplast) [Spir... 67 6e-09
ref|YP_004769671.1| hypothetical chloroplast RF21 (chloroplast) ... 67 6e-09
ref|YP_009349318.1| hypothetical chloroplast RF2 (chloroplast) [... 67 8e-09
ref|YP_001595551.1| Ycf2 [Lemna minor] >gi|161784254|ref|YP_0015... 67 8e-09
gb|AEX93964.1| hypothetical chloroplast RF21 (chloroplast) [Aloe... 67 1e-08
gb|AEX93967.1| hypothetical chloroplast RF21 (chloroplast) [Knip... 67 1e-08
gb|AEX93965.1| hypothetical chloroplast RF21 (chloroplast) [Asph... 67 1e-08
ref|YP_009409365.1| Ycf2 (chloroplast) [Aloe vera] >gi|123651451... 67 1e-08
ref|YP_009409280.1| Ycf2 (chloroplast) [Aloe maculata] >gi|12365... 67 1e-08
ref|YP_009424752.1| hypothetical chloroplast RF2 (chloroplast) [... 67 1e-08
gb|AAB50322.1| ORF2280 gene homolog, partial (chloroplast) [Mira... 63 2e-08
gb|AAB50536.1| ORF2280 gene homolog, partial (chloroplast) [Nepe... 63 2e-08
gb|AAB50317.1| ORF2280 gene homolog, partial (chloroplast) [Boug... 63 2e-08
gb|AAB50542.1| ORF2280 gene homolog, partial (chloroplast) [Sarc... 63 2e-08
gb|AAB50318.1| ORF2280 gene homolog, partial (chloroplast) [Cala... 63 2e-08
gb|AAB50330.1| ORF2280 gene homolog, partial (chloroplast) [Steg... 63 2e-08
gb|AAB50314.1| ORF2280 gene homolog, partial (chloroplast) [Anre... 63 2e-08
gb|AAB50333.1| ORF2280 gene homolog, partial (chloroplast) [Tetr... 63 2e-08
>gb|AEP33251.1| hypothetical protein, partial (chloroplast) [Posidonia oceanica]
Length = 208
Score = 67.0 bits (162), Expect = 1e-09
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LS RK+RNIINLNS Q FEI GK+LICYLMS + + +
Sbjct: 51 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKHLICYLMSAFREKR 96
>ref|YP_004769854.1| hypothetical chloroplast RF21 (chloroplast) [Wolffiella lingulata]
ref|YP_004769873.1| hypothetical chloroplast RF21 (chloroplast) [Wolffiella lingulata]
gb|AEK94467.1| hypothetical chloroplast RF21 (chloroplast) [Wolffiella lingulata]
gb|AEK94486.1| hypothetical chloroplast RF21 (chloroplast) [Wolffiella lingulata]
Length = 2292
Score = 68.2 bits (165), Expect = 3e-09
Identities = 34/53 (64%), Positives = 38/53 (71%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSKREHNITK 481
D DWELFD LSLRK+RNIINLNS Q FEI GK LICYLMS + + +K
Sbjct: 235 DPDWELFDRLSLRKKRNIINLNSGQLFEILGKDLICYLMSAFREKSEGQGFSK 287
>gb|AEK94383.2| hypothetical chloroplast RF21 (chloroplast) [Spirodela polyrhiza]
Length = 2278
Score = 67.4 bits (163), Expect = 6e-09
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LSLRK+RNIINLNS Q FEI GK LICYLMS + + +
Sbjct: 235 DPDWELFDRLSLRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 280
>ref|YP_004769671.1| hypothetical chloroplast RF21 (chloroplast) [Spirodela polyrhiza]
ref|YP_004769690.1| hypothetical chloroplast RF21 (chloroplast) [Spirodela polyrhiza]
gb|AEK94402.1| hypothetical chloroplast RF21 (chloroplast) [Spirodela polyrhiza]
Length = 2278
Score = 67.4 bits (163), Expect = 6e-09
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LSLRK+RNIINLNS Q FEI GK LICYLMS + + +
Sbjct: 235 DPDWELFDRLSLRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 280
>ref|YP_009349318.1| hypothetical chloroplast RF2 (chloroplast) [Symplocarpus
renifolius]
ref|YP_009349335.1| hypothetical chloroplast RF2 (chloroplast) [Symplocarpus
renifolius]
gb|APZ83184.1| hypothetical chloroplast RF2 (chloroplast) [Symplocarpus
renifolius]
gb|APZ83201.1| hypothetical chloroplast RF2 (chloroplast) [Symplocarpus
renifolius]
Length = 2305
Score = 67.0 bits (162), Expect = 8e-09
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LS RK+RNIINLNS Q FEI GK+LICYLMS + + +
Sbjct: 235 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKHLICYLMSAFREKR 280
>ref|YP_001595551.1| Ycf2 [Lemna minor]
ref|YP_001595570.1| Ycf2 [Lemna minor]
sp|A9L9D9.1|YCF2_LEMMI RecName: Full=Protein Ycf2
gb|ABD48538.1| Ycf2 (chloroplast) [Lemna minor]
gb|ABD48557.1| Ycf2 (chloroplast) [Lemna minor]
Length = 2311
Score = 67.0 bits (162), Expect = 8e-09
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LSLRK+RNIINLNS Q FEI GK L+CYLMS + + +
Sbjct: 235 DPDWELFDRLSLRKKRNIINLNSGQLFEILGKDLVCYLMSAFREKR 280
>gb|AEX93964.1| hypothetical chloroplast RF21 (chloroplast) [Aloe vera]
Length = 2282
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LS RK+RNIINLNS Q FEI GK LICYLMS + K +
Sbjct: 230 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 275
>gb|AEX93967.1| hypothetical chloroplast RF21 (chloroplast) [Kniphofia
linearifolia]
Length = 2284
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LS RK+RNIINLNS Q FEI GK LICYLMS + K +
Sbjct: 230 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 275
>gb|AEX93965.1| hypothetical chloroplast RF21 (chloroplast) [Asphodeline damascena]
Length = 2288
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LS RK+RNIINLNS Q FEI GK LICYLMS + K +
Sbjct: 226 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 271
>ref|YP_009409365.1| Ycf2 (chloroplast) [Aloe vera]
ref|YP_009409382.1| Ycf2 (chloroplast) [Aloe vera]
gb|APP88818.1| Ycf2 (chloroplast) [Aloe vera]
gb|APP88835.1| Ycf2 (chloroplast) [Aloe vera]
Length = 2289
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LS RK+RNIINLNS Q FEI GK LICYLMS + K +
Sbjct: 230 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 275
>ref|YP_009409280.1| Ycf2 (chloroplast) [Aloe maculata]
ref|YP_009409297.1| Ycf2 (chloroplast) [Aloe maculata]
gb|APP88733.1| Ycf2 (chloroplast) [Aloe maculata]
gb|APP88750.1| Ycf2 (chloroplast) [Aloe maculata]
Length = 2289
Score = 66.6 bits (161), Expect = 1e-08
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWELFD LS RK+RNIINLNS Q FEI GK LICYLMS + K +
Sbjct: 230 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 275
>ref|YP_009424752.1| hypothetical chloroplast RF2 (chloroplast) [Thrixspermum japonicum]
ref|YP_009424759.1| hypothetical chloroplast RF2 (chloroplast) [Thrixspermum japonicum]
gb|ASU93281.1| hypothetical chloroplast RF2 (chloroplast) [Thrixspermum japonicum]
gb|ASU93288.1| hypothetical chloroplast RF2 (chloroplast) [Thrixspermum japonicum]
Length = 2293
Score = 66.6 bits (161), Expect = 1e-08
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEYLKSK 460
D DWE FDHLS RK+RNIINLNS Q FEI GK LICYLMS + + +
Sbjct: 230 DHDWEFFDHLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 275
>gb|AAB50322.1| ORF2280 gene homolog, partial (chloroplast) [Mirabilis nyctaginea]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEY 448
D DWELFD LSLRK RNIINLNS Q FEI K+ ICYLMS +
Sbjct: 40 DHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAF 81
>gb|AAB50536.1| ORF2280 gene homolog, partial (chloroplast) [Nepenthes alata]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEY 448
D DWELFD LSLRK RNIINLNS Q FEI K+ ICYLMS +
Sbjct: 40 DHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAF 81
>gb|AAB50317.1| ORF2280 gene homolog, partial (chloroplast) [Bougainvillea glabra]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEY 448
D DWELFD LSLRK RNIINLNS Q FEI K+ ICYLMS +
Sbjct: 40 DHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAF 81
>gb|AAB50542.1| ORF2280 gene homolog, partial (chloroplast) [Sarcobatus
vermiculatus]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEY 448
D DWELFD LSLRK RNIINLNS Q FEI K+ ICYLMS +
Sbjct: 40 DHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAF 81
>gb|AAB50318.1| ORF2280 gene homolog, partial (chloroplast) [Calandrinia ciliata]
gb|AAB50319.1| ORF2280 gene homolog, partial (chloroplast) [Claytonia perfoliata]
gb|AAB50320.1| ORF2280 gene homolog, partial (chloroplast) [Didierea
madagascariensis]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEY 448
D DWELFD LSLRK RNIINLNS Q FEI K+ ICYLMS +
Sbjct: 40 DHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAF 81
>gb|AAB50330.1| ORF2280 gene homolog, partial (chloroplast) [Stegnosperma
halimifolium]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEY 448
D DWELFD LSLRK RNIINLNS Q FEI K+ ICYLMS +
Sbjct: 40 DHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAF 81
>gb|AAB50314.1| ORF2280 gene homolog, partial (chloroplast) [Anredera cordifolia]
gb|AAB50316.1| ORF2280 gene homolog, partial (chloroplast) [Alluaudia montagnacii]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEY 448
D DWELFD LSLRK RNIINLNS Q FEI K+ ICYLMS +
Sbjct: 40 DHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAF 81
>gb|AAB50333.1| ORF2280 gene homolog, partial (chloroplast) [Tetragonia
tetragonioides]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = +2
Query: 323 DQDWELFDHLSLRKERNIINLNSVQPFEI*GKYLICYLMSEY 448
D DWELFD LSLRK RNIINLNS Q FEI K+ ICYLMS +
Sbjct: 40 DHDWELFDRLSLRKRRNIINLNSGQLFEILVKHWICYLMSAF 81