BLASTX nr result
ID: Ophiopogon27_contig00011935
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00011935
(397 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEP33251.1| hypothetical protein, partial (chloroplast) [Posi... 64 7e-10
gb|AEK94383.2| hypothetical chloroplast RF21 (chloroplast) [Spir... 65 2e-09
ref|YP_004769671.1| hypothetical chloroplast RF21 (chloroplast) ... 65 2e-09
ref|YP_009349318.1| hypothetical chloroplast RF2 (chloroplast) [... 64 3e-09
ref|YP_001595551.1| Ycf2 [Lemna minor] >gi|161784254|ref|YP_0015... 64 3e-09
gb|AEX93964.1| hypothetical chloroplast RF21 (chloroplast) [Aloe... 64 4e-09
gb|AEX93967.1| hypothetical chloroplast RF21 (chloroplast) [Knip... 64 4e-09
gb|AEX93965.1| hypothetical chloroplast RF21 (chloroplast) [Asph... 64 4e-09
ref|YP_009409365.1| Ycf2 (chloroplast) [Aloe vera] >gi|123651451... 64 4e-09
ref|YP_009409280.1| Ycf2 (chloroplast) [Aloe maculata] >gi|12365... 64 4e-09
ref|YP_004769854.1| hypothetical chloroplast RF21 (chloroplast) ... 64 4e-09
ref|YP_009424752.1| hypothetical chloroplast RF2 (chloroplast) [... 64 4e-09
gb|AUD57941.1| hypothetical chloroplast RF21 (chloroplast) [Land... 63 7e-09
ref|YP_009033929.1| hypothetical chloroplast RF2 (plastid) [Dios... 63 9e-09
ref|YP_009335462.1| hypothetical chloroplast RF21 (chloroplast) ... 63 9e-09
gb|AEX93969.1| hypothetical chloroplast RF21 (chloroplast) [Phor... 63 9e-09
ref|YP_009440887.1| hypothetical chloroplast protein ycf2 (plast... 63 9e-09
ref|YP_009440905.1| hypothetical chloroplast protein ycf2 (plast... 63 9e-09
gb|AEZ01468.1| hypothetical chloroplast RF21 (chloroplast) [Japo... 63 9e-09
gb|AEZ48748.1| hypothetical chloroplast RF2, partial (plastid) [... 63 9e-09
>gb|AEP33251.1| hypothetical protein, partial (chloroplast) [Posidonia oceanica]
Length = 208
Score = 64.3 bits (155), Expect = 7e-10
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LS RK+RN+INLNS Q FEI GK+LICYLMS + + +
Sbjct: 51 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKHLICYLMSAFREKR 96
>gb|AEK94383.2| hypothetical chloroplast RF21 (chloroplast) [Spirodela polyrhiza]
Length = 2278
Score = 64.7 bits (156), Expect = 2e-09
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LSLRK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 235 DPDWELFDRLSLRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 280
>ref|YP_004769671.1| hypothetical chloroplast RF21 (chloroplast) [Spirodela polyrhiza]
ref|YP_004769690.1| hypothetical chloroplast RF21 (chloroplast) [Spirodela polyrhiza]
gb|AEK94402.1| hypothetical chloroplast RF21 (chloroplast) [Spirodela polyrhiza]
Length = 2278
Score = 64.7 bits (156), Expect = 2e-09
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LSLRK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 235 DPDWELFDRLSLRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 280
>ref|YP_009349318.1| hypothetical chloroplast RF2 (chloroplast) [Symplocarpus
renifolius]
ref|YP_009349335.1| hypothetical chloroplast RF2 (chloroplast) [Symplocarpus
renifolius]
gb|APZ83184.1| hypothetical chloroplast RF2 (chloroplast) [Symplocarpus
renifolius]
gb|APZ83201.1| hypothetical chloroplast RF2 (chloroplast) [Symplocarpus
renifolius]
Length = 2305
Score = 64.3 bits (155), Expect = 3e-09
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LS RK+RN+INLNS Q FEI GK+LICYLMS + + +
Sbjct: 235 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKHLICYLMSAFREKR 280
>ref|YP_001595551.1| Ycf2 [Lemna minor]
ref|YP_001595570.1| Ycf2 [Lemna minor]
sp|A9L9D9.1|YCF2_LEMMI RecName: Full=Protein Ycf2
gb|ABD48538.1| Ycf2 (chloroplast) [Lemna minor]
gb|ABD48557.1| Ycf2 (chloroplast) [Lemna minor]
Length = 2311
Score = 64.3 bits (155), Expect = 3e-09
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LSLRK+RN+INLNS Q FEI GK L+CYLMS + + +
Sbjct: 235 DPDWELFDRLSLRKKRNIINLNSGQLFEILGKDLVCYLMSAFREKR 280
>gb|AEX93964.1| hypothetical chloroplast RF21 (chloroplast) [Aloe vera]
Length = 2282
Score = 63.9 bits (154), Expect = 4e-09
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + K +
Sbjct: 230 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 275
>gb|AEX93967.1| hypothetical chloroplast RF21 (chloroplast) [Kniphofia
linearifolia]
Length = 2284
Score = 63.9 bits (154), Expect = 4e-09
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + K +
Sbjct: 230 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 275
>gb|AEX93965.1| hypothetical chloroplast RF21 (chloroplast) [Asphodeline damascena]
Length = 2288
Score = 63.9 bits (154), Expect = 4e-09
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + K +
Sbjct: 226 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 271
>ref|YP_009409365.1| Ycf2 (chloroplast) [Aloe vera]
ref|YP_009409382.1| Ycf2 (chloroplast) [Aloe vera]
gb|APP88818.1| Ycf2 (chloroplast) [Aloe vera]
gb|APP88835.1| Ycf2 (chloroplast) [Aloe vera]
Length = 2289
Score = 63.9 bits (154), Expect = 4e-09
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + K +
Sbjct: 230 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 275
>ref|YP_009409280.1| Ycf2 (chloroplast) [Aloe maculata]
ref|YP_009409297.1| Ycf2 (chloroplast) [Aloe maculata]
gb|APP88733.1| Ycf2 (chloroplast) [Aloe maculata]
gb|APP88750.1| Ycf2 (chloroplast) [Aloe maculata]
Length = 2289
Score = 63.9 bits (154), Expect = 4e-09
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + K +
Sbjct: 230 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFRKKR 275
>ref|YP_004769854.1| hypothetical chloroplast RF21 (chloroplast) [Wolffiella lingulata]
ref|YP_004769873.1| hypothetical chloroplast RF21 (chloroplast) [Wolffiella lingulata]
gb|AEK94467.1| hypothetical chloroplast RF21 (chloroplast) [Wolffiella lingulata]
gb|AEK94486.1| hypothetical chloroplast RF21 (chloroplast) [Wolffiella lingulata]
Length = 2292
Score = 63.9 bits (154), Expect = 4e-09
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEY 374
D DWELF LSLRK+RN+INLNS Q FEI GK LICYLMS +
Sbjct: 235 DPDWELFDRLSLRKKRNIINLNSGQLFEILGKDLICYLMSAF 276
>ref|YP_009424752.1| hypothetical chloroplast RF2 (chloroplast) [Thrixspermum japonicum]
ref|YP_009424759.1| hypothetical chloroplast RF2 (chloroplast) [Thrixspermum japonicum]
gb|ASU93281.1| hypothetical chloroplast RF2 (chloroplast) [Thrixspermum japonicum]
gb|ASU93288.1| hypothetical chloroplast RF2 (chloroplast) [Thrixspermum japonicum]
Length = 2293
Score = 63.9 bits (154), Expect = 4e-09
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWE F HLS RK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 230 DHDWEFFDHLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 275
>gb|AUD57941.1| hypothetical chloroplast RF21 (chloroplast) [Landoltia punctata]
gb|AUD57962.1| hypothetical chloroplast RF21 (chloroplast) [Landoltia punctata]
Length = 2309
Score = 63.2 bits (152), Expect = 7e-09
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LSLRK+RN+INLNS Q FEI GK ICYLMS + + +
Sbjct: 235 DPDWELFDRLSLRKKRNIINLNSGQLFEILGKDFICYLMSAFREKR 280
>ref|YP_009033929.1| hypothetical chloroplast RF2 (plastid) [Dioscorea rotundata]
ref|YP_009033946.1| hypothetical chloroplast RF2 (plastid) [Dioscorea rotundata]
gb|AHZ18174.1| hypothetical chloroplast RF2 (plastid) [Dioscorea rotundata]
gb|AHZ18191.1| hypothetical chloroplast RF2 (plastid) [Dioscorea rotundata]
Length = 2258
Score = 62.8 bits (151), Expect = 9e-09
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D+DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 230 DRDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 275
>ref|YP_009335462.1| hypothetical chloroplast RF21 (chloroplast) [Oziroe biflora]
ref|YP_009335479.1| hypothetical chloroplast RF21 (chloroplast) [Oziroe biflora]
gb|AEX93974.1| hypothetical chloroplast RF21 (chloroplast) [Oziroe biflora]
gb|APO12520.1| hypothetical chloroplast RF21 (chloroplast) [Oziroe biflora]
gb|APO12537.1| hypothetical chloroplast RF21 (chloroplast) [Oziroe biflora]
Length = 2260
Score = 62.8 bits (151), Expect = 9e-09
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 226 DHDWELFDRLSPRKKRNIINLNSGQLFEILGKNLICYLMSAFREKR 271
>gb|AEX93969.1| hypothetical chloroplast RF21 (chloroplast) [Phormium tenax]
Length = 2278
Score = 62.8 bits (151), Expect = 9e-09
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D+DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 230 DRDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 275
>ref|YP_009440887.1| hypothetical chloroplast protein ycf2 (plastid) [Japonolirion
osense]
emb|CUS18842.1| hypothetical chloroplast protein ycf2 (plastid) [Japonolirion
osense]
Length = 2283
Score = 62.8 bits (151), Expect = 9e-09
Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +3
Query: 237 EPGH-DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
+P H D DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 225 DPIHKDHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 275
>ref|YP_009440905.1| hypothetical chloroplast protein ycf2 (plastid) [Japonolirion
osense]
emb|CUS18860.1| hypothetical chloroplast protein ycf2 (plastid) [Japonolirion
osense]
Length = 2283
Score = 62.8 bits (151), Expect = 9e-09
Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +3
Query: 237 EPGH-DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
+P H D DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 225 DPIHKDHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 275
>gb|AEZ01468.1| hypothetical chloroplast RF21 (chloroplast) [Japonolirion osense]
Length = 2283
Score = 62.8 bits (151), Expect = 9e-09
Identities = 32/51 (62%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +3
Query: 237 EPGH-DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
+P H D DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 225 DPIHKDHDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 275
>gb|AEZ48748.1| hypothetical chloroplast RF2, partial (plastid) [Phormium tenax]
Length = 2285
Score = 62.8 bits (151), Expect = 9e-09
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +3
Query: 249 DQDWELFGHLSLRKERNVINLNSVQPFEI*GKYLICYLMSEYSKSK 386
D+DWELF LS RK+RN+INLNS Q FEI GK LICYLMS + + +
Sbjct: 230 DRDWELFDRLSPRKKRNIINLNSGQLFEILGKDLICYLMSAFREKR 275