BLASTX nr result

ID: Ophiopogon27_contig00011603 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00011603
         (423 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagu...   105   1e-23
ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [...   105   1e-23

>gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagus officinalis]
          Length = 1222

 Score =  105 bits (262), Expect = 1e-23
 Identities = 77/177 (43%), Positives = 96/177 (54%), Gaps = 38/177 (21%)
 Frame = -3

Query: 421 DPPSPEFNESANFPSMPGQFLEEAIRADSHELPASSLHKNSPSAAVEAVELDRPVDQEVE 242
           D PSPEF  + NFPS PG  LEE I+A+S EL AS+  K +   A+EA   ++P++QEVE
Sbjct: 249 DHPSPEF--TVNFPSTPG-LLEETIQANSQELSASNPQKITQHTALEA---EKPINQEVE 302

Query: 241 CPVAINAA---STSPKPANLAQIVSSPTLVLTEPKPDSV--------------------- 134
           CP A N     +T  K ANL+Q+VSSPT VL EPKPDS+                     
Sbjct: 303 CPDATNDRVINATIQKSANLSQVVSSPTSVLAEPKPDSINDAGHKHDLSTTFTVVSSSSS 362

Query: 133 ---EAGPDAANNCNLTP------VEPTDPKLADNSQVLPSST-----SAPQCSGETM 5
              EA P A+++   T       V  TDPKLA+ S  LPSST       PQCS E +
Sbjct: 363 VLTEATPAASHSLGGTSSGSDVLVRSTDPKLAEISPALPSSTLGHTEPVPQCSDEVI 419


>ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
          Length = 1236

 Score =  105 bits (262), Expect = 1e-23
 Identities = 77/177 (43%), Positives = 96/177 (54%), Gaps = 38/177 (21%)
 Frame = -3

Query: 421 DPPSPEFNESANFPSMPGQFLEEAIRADSHELPASSLHKNSPSAAVEAVELDRPVDQEVE 242
           D PSPEF  + NFPS PG  LEE I+A+S EL AS+  K +   A+EA   ++P++QEVE
Sbjct: 263 DHPSPEF--TVNFPSTPG-LLEETIQANSQELSASNPQKITQHTALEA---EKPINQEVE 316

Query: 241 CPVAINAA---STSPKPANLAQIVSSPTLVLTEPKPDSV--------------------- 134
           CP A N     +T  K ANL+Q+VSSPT VL EPKPDS+                     
Sbjct: 317 CPDATNDRVINATIQKSANLSQVVSSPTSVLAEPKPDSINDAGHKHDLSTTFTVVSSSSS 376

Query: 133 ---EAGPDAANNCNLTP------VEPTDPKLADNSQVLPSST-----SAPQCSGETM 5
              EA P A+++   T       V  TDPKLA+ S  LPSST       PQCS E +
Sbjct: 377 VLTEATPAASHSLGGTSSGSDVLVRSTDPKLAEISPALPSSTLGHTEPVPQCSDEVI 433


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