BLASTX nr result
ID: Ophiopogon27_contig00011551
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00011551
(783 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK77666.1| uncharacterized protein A4U43_C02F9190 [Asparagus... 191 5e-58
ref|XP_020253325.1| LOW QUALITY PROTEIN: glycine-rich RNA-bindin... 188 3e-54
ref|XP_019098615.1| PREDICTED: glycine-rich RNA-binding protein ... 177 1e-52
ref|XP_021292908.1| LOW QUALITY PROTEIN: cleavage and polyadenyl... 187 1e-51
ref|XP_007044903.1| PREDICTED: cleavage and polyadenylation spec... 187 1e-51
ref|XP_017971402.1| PREDICTED: cleavage and polyadenylation spec... 187 1e-51
ref|XP_017971401.1| PREDICTED: cleavage and polyadenylation spec... 187 2e-51
ref|XP_022776208.1| cleavage and polyadenylation specificity fac... 184 2e-50
gb|PPD77271.1| hypothetical protein GOBAR_DD25795 [Gossypium bar... 184 2e-50
ref|XP_017615445.1| PREDICTED: cleavage and polyadenylation spec... 184 2e-50
ref|XP_016679647.1| PREDICTED: cleavage and polyadenylation spec... 184 2e-50
ref|XP_016721052.1| PREDICTED: cleavage and polyadenylation spec... 184 2e-50
ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation spec... 184 2e-50
gb|KHG22501.1| Cleavage and polyadenylation specificity factor s... 184 2e-50
ref|XP_021632322.1| cleavage and polyadenylation specificity fac... 184 2e-50
ref|XP_022776207.1| cleavage and polyadenylation specificity fac... 184 2e-50
dbj|GAV59792.1| RRM_1 domain-containing protein [Cephalotus foll... 184 3e-50
ref|XP_021667444.1| cleavage and polyadenylation specificity fac... 183 5e-50
ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation spec... 183 7e-50
gb|OMO81546.1| hypothetical protein COLO4_23527 [Corchorus olito... 181 1e-49
>gb|ONK77666.1| uncharacterized protein A4U43_C02F9190 [Asparagus officinalis]
Length = 147
Score = 191 bits (484), Expect = 5e-58
Identities = 89/98 (90%), Positives = 94/98 (95%)
Frame = +2
Query: 455 DVNGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAA 634
D+NGPTMLFVGELHWWTTDADLESVLT YGRVKEIKFFDERASGKSKGYCQVEF DA +A
Sbjct: 16 DMNGPTMLFVGELHWWTTDADLESVLTHYGRVKEIKFFDERASGKSKGYCQVEFCDAASA 75
Query: 635 AACKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
AACKEGMDGYEFNG+ACVVAFASPQTLRQMG S+V+RN
Sbjct: 76 AACKEGMDGYEFNGRACVVAFASPQTLRQMGESFVSRN 113
>ref|XP_020253325.1| LOW QUALITY PROTEIN: glycine-rich RNA-binding protein 3,
mitochondrial [Asparagus officinalis]
Length = 370
Score = 188 bits (478), Expect = 3e-54
Identities = 88/97 (90%), Positives = 93/97 (95%)
Frame = +2
Query: 458 VNGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAA 637
+NGPTMLFVGELHWWTTDADLESVLT YGRVKEIKFFDERASGKSKGYCQVEF DA +AA
Sbjct: 1 MNGPTMLFVGELHWWTTDADLESVLTHYGRVKEIKFFDERASGKSKGYCQVEFCDAASAA 60
Query: 638 ACKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
ACKEGMDGYEFNG+ACVVAFASPQTLRQMG S+V+RN
Sbjct: 61 ACKEGMDGYEFNGRACVVAFASPQTLRQMGESFVSRN 97
>ref|XP_019098615.1| PREDICTED: glycine-rich RNA-binding protein GRP2A-like, partial
[Camelina sativa]
Length = 151
Score = 177 bits (448), Expect = 1e-52
Identities = 80/96 (83%), Positives = 90/96 (93%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NG TMLFVGELHWWTTDA++ES+L+QYGRVKEIKFFDER SGKSKGYCQVEFYD+ AAAA
Sbjct: 38 NGNTMLFVGELHWWTTDAEIESILSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAAA 97
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNGKACVVAFASP+TL+QMGA++ RN
Sbjct: 98 CKEGMNGYIFNGKACVVAFASPETLKQMGANFTGRN 133
>ref|XP_021292908.1| LOW QUALITY PROTEIN: cleavage and polyadenylation specificity
factor subunit 6-like [Herrania umbratica]
Length = 653
Score = 187 bits (476), Expect = 1e-51
Identities = 86/96 (89%), Positives = 93/96 (96%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD +AAA
Sbjct: 228 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAA 287
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGMDGY FNG+ACVVAFASPQTL+QMGASY+N+N
Sbjct: 288 CKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKN 323
>ref|XP_007044903.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X3 [Theobroma cacao]
ref|XP_017971403.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X3 [Theobroma cacao]
ref|XP_017971405.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X3 [Theobroma cacao]
ref|XP_017971406.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X3 [Theobroma cacao]
gb|EOY00734.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY00735.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 187 bits (476), Expect = 1e-51
Identities = 86/96 (89%), Positives = 93/96 (96%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD +AAA
Sbjct: 228 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAA 287
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGMDGY FNG+ACVVAFASPQTL+QMGASY+N+N
Sbjct: 288 CKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKN 323
>ref|XP_017971402.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X2 [Theobroma cacao]
Length = 660
Score = 187 bits (476), Expect = 1e-51
Identities = 86/96 (89%), Positives = 93/96 (96%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD +AAA
Sbjct: 235 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAA 294
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGMDGY FNG+ACVVAFASPQTL+QMGASY+N+N
Sbjct: 295 CKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKN 330
>ref|XP_017971401.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 isoform X1 [Theobroma cacao]
Length = 700
Score = 187 bits (476), Expect = 2e-51
Identities = 86/96 (89%), Positives = 93/96 (96%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD +AAA
Sbjct: 275 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAA 334
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGMDGY FNG+ACVVAFASPQTL+QMGASY+N+N
Sbjct: 335 CKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKN 370
>ref|XP_022776208.1| cleavage and polyadenylation specificity factor subunit 6-like
isoform X2 [Durio zibethinus]
ref|XP_022776209.1| cleavage and polyadenylation specificity factor subunit 6-like
isoform X2 [Durio zibethinus]
ref|XP_022776210.1| cleavage and polyadenylation specificity factor subunit 6-like
isoform X2 [Durio zibethinus]
Length = 646
Score = 184 bits (468), Expect = 2e-50
Identities = 84/96 (87%), Positives = 93/96 (96%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ +A A
Sbjct: 223 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSASATA 282
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNG+ACVVAFASPQTL+QMGASY+N+N
Sbjct: 283 CKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNKN 318
>gb|PPD77271.1| hypothetical protein GOBAR_DD25795 [Gossypium barbadense]
Length = 648
Score = 184 bits (468), Expect = 2e-50
Identities = 84/96 (87%), Positives = 94/96 (97%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ +AAA
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSASAAA 283
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNG+ACVVAFASPQTL+QMGASY+N++
Sbjct: 284 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKD 319
>ref|XP_017615445.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium arboreum]
ref|XP_017615446.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium arboreum]
Length = 648
Score = 184 bits (468), Expect = 2e-50
Identities = 84/96 (87%), Positives = 94/96 (97%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ +AAA
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSASAAA 283
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNG+ACVVAFASPQTL+QMGASY+N++
Sbjct: 284 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKD 319
>ref|XP_016679647.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Gossypium hirsutum]
Length = 648
Score = 184 bits (468), Expect = 2e-50
Identities = 84/96 (87%), Positives = 94/96 (97%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ +AAA
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSASAAA 283
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNG+ACVVAFASPQTL+QMGASY+N++
Sbjct: 284 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKD 319
>ref|XP_016721052.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like [Gossypium hirsutum]
Length = 648
Score = 184 bits (468), Expect = 2e-50
Identities = 84/96 (87%), Positives = 94/96 (97%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ +AAA
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSASAAA 283
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNG+ACVVAFASPQTL+QMGASY+N++
Sbjct: 284 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKD 319
>ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium raimondii]
ref|XP_012459071.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Gossypium raimondii]
gb|KJB78035.1| hypothetical protein B456_012G173800 [Gossypium raimondii]
Length = 648
Score = 184 bits (468), Expect = 2e-50
Identities = 84/96 (87%), Positives = 94/96 (97%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ +AAA
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSASAAA 283
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNG+ACVVAFASPQTL+QMGASY+N++
Sbjct: 284 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKD 319
>gb|KHG22501.1| Cleavage and polyadenylation specificity factor subunit [Gossypium
arboreum]
Length = 648
Score = 184 bits (468), Expect = 2e-50
Identities = 84/96 (87%), Positives = 94/96 (97%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ +AAA
Sbjct: 224 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSASAAA 283
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNG+ACVVAFASPQTL+QMGASY+N++
Sbjct: 284 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKD 319
>ref|XP_021632322.1| cleavage and polyadenylation specificity factor subunit 6 [Manihot
esculenta]
ref|XP_021632323.1| cleavage and polyadenylation specificity factor subunit 6 [Manihot
esculenta]
gb|OAY32465.1| hypothetical protein MANES_13G019800 [Manihot esculenta]
Length = 650
Score = 184 bits (468), Expect = 2e-50
Identities = 85/96 (88%), Positives = 93/96 (96%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYDA AAAA
Sbjct: 225 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDAAAAAA 284
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+G+ NG+ACVVAFASPQTL+QMGASY+N+N
Sbjct: 285 CKEGMNGHVLNGRACVVAFASPQTLKQMGASYMNKN 320
>ref|XP_022776207.1| cleavage and polyadenylation specificity factor subunit 6-like
isoform X1 [Durio zibethinus]
Length = 659
Score = 184 bits (468), Expect = 2e-50
Identities = 84/96 (87%), Positives = 93/96 (96%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ +A A
Sbjct: 236 NGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSASATA 295
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNG+ACVVAFASPQTL+QMGASY+N+N
Sbjct: 296 CKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNKN 331
>dbj|GAV59792.1| RRM_1 domain-containing protein [Cephalotus follicularis]
Length = 658
Score = 184 bits (467), Expect = 3e-50
Identities = 84/96 (87%), Positives = 92/96 (95%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NG +MLFVGELHWWTTDA++ES+L+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ AAAA
Sbjct: 231 NGSSMLFVGELHWWTTDAEIESILSQYGRVKEIKFFDERASGKSKGYCQVEFYDSAAAAA 290
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM GY FNG+ACVVAFASPQTLRQMGASY+NRN
Sbjct: 291 CKEGMHGYVFNGRACVVAFASPQTLRQMGASYINRN 326
>ref|XP_021667444.1| cleavage and polyadenylation specificity factor subunit 6 [Hevea
brasiliensis]
ref|XP_021667445.1| cleavage and polyadenylation specificity factor subunit 6 [Hevea
brasiliensis]
ref|XP_021667447.1| cleavage and polyadenylation specificity factor subunit 6 [Hevea
brasiliensis]
Length = 653
Score = 183 bits (465), Expect = 5e-50
Identities = 85/95 (89%), Positives = 92/95 (96%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NG TMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYDA AAAA
Sbjct: 226 NGSTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDAAAAAA 285
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNR 745
CKEGMDG+ FNG+ACVVAFASPQTL+QMGASY+N+
Sbjct: 286 CKEGMDGHVFNGRACVVAFASPQTLKQMGASYMNK 320
>ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
6 [Ziziphus jujuba]
Length = 659
Score = 183 bits (464), Expect = 7e-50
Identities = 85/96 (88%), Positives = 93/96 (96%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NG TMLFVGELHWWTTDA+LESVL+QYGRVKEIKFFDERASGKSKGYCQVEFYD+ AAAA
Sbjct: 230 NGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSSAAAA 289
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+G+ FNG+ACVVAFASPQTL+QMGASYVN+N
Sbjct: 290 CKEGMNGHVFNGRACVVAFASPQTLKQMGASYVNKN 325
>gb|OMO81546.1| hypothetical protein COLO4_23527 [Corchorus olitorius]
Length = 588
Score = 181 bits (460), Expect = 1e-49
Identities = 83/96 (86%), Positives = 92/96 (95%)
Frame = +2
Query: 461 NGPTMLFVGELHWWTTDADLESVLTQYGRVKEIKFFDERASGKSKGYCQVEFYDAVAAAA 640
NGPTMLFVGELHWWTTDA+LE VL+QYGRVKEIKFFDERASGKSKGYCQVEF+DA +AAA
Sbjct: 153 NGPTMLFVGELHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDASSAAA 212
Query: 641 CKEGMDGYEFNGKACVVAFASPQTLRQMGASYVNRN 748
CKEGM+GY FNG+ACVVAFASPQTL+QMGASY+ +N
Sbjct: 213 CKEGMNGYMFNGRACVVAFASPQTLKQMGASYMEKN 248