BLASTX nr result

ID: Ophiopogon27_contig00011475 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00011475
         (821 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK65704.1| uncharacterized protein A4U43_C06F80 [Asparagus o...    61   2e-14
ref|XP_020270104.1| LOW QUALITY PROTEIN: translation initiation ...    61   2e-14

>gb|ONK65704.1| uncharacterized protein A4U43_C06F80 [Asparagus officinalis]
          Length = 1033

 Score = 60.8 bits (146), Expect(2) = 2e-14
 Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = +1

Query: 592 QLRPNGP-VRPAVNDKRLAVEEEREKVIESLEEVLDKA--XXXXXXXXXXXXXXXDVYRP 762
           +LRPNGP +R +V+D    V ++R +VIESLEEVLDKA                 D Y+P
Sbjct: 139 KLRPNGPPLRQSVDDNSAVVVDDRNQVIESLEEVLDKAEKLETLTPSKFVSKESKDGYKP 198

Query: 763 NASSTKSGGKFVNPTTS 813
           NASS KS  +F NPTTS
Sbjct: 199 NASS-KSSARFANPTTS 214



 Score = 47.0 bits (110), Expect(2) = 2e-14
 Identities = 43/117 (36%), Positives = 45/117 (38%), Gaps = 8/117 (6%)
 Frame = +3

Query: 249 MASPASLATLGSTWPXXXXXXXXPCFALRWEXXXXXXXXXXXXXXXXXXXXXXKR-RMSS 425
           MASPASLA+LGS  P        PC   R                           R   
Sbjct: 1   MASPASLASLGSARPT-------PCCLPRCSNNSDKCKSTLVFLVAASGANHHHHHRHRL 53

Query: 426 SRLHAISGFDGGHWMPMPRRHWSFSSRPLGRT-----CKCMLTT--NLIEEKGVVSS 575
            RL  IS         +PR HW  S  P   T     CKCM TT  NLIEEKGV SS
Sbjct: 54  RRLQVISSTSSFSAWMIPRLHWPLSYSPTTNTSSTRICKCMATTTTNLIEEKGVSSS 110


>ref|XP_020270104.1| LOW QUALITY PROTEIN: translation initiation factor IF-2,
           chloroplastic-like [Asparagus officinalis]
          Length = 1030

 Score = 60.8 bits (146), Expect(2) = 2e-14
 Identities = 38/77 (49%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = +1

Query: 592 QLRPNGP-VRPAVNDKRLAVEEEREKVIESLEEVLDKA--XXXXXXXXXXXXXXXDVYRP 762
           +LRPNGP +R +V+D    V ++R +VIESLEEVLDKA                 D Y+P
Sbjct: 139 KLRPNGPPLRQSVDDNSAVVVDDRNQVIESLEEVLDKAEKLETLTPSKFVSKESKDGYKP 198

Query: 763 NASSTKSGGKFVNPTTS 813
           NASS KS  +F NPTTS
Sbjct: 199 NASS-KSSARFANPTTS 214



 Score = 47.0 bits (110), Expect(2) = 2e-14
 Identities = 43/117 (36%), Positives = 45/117 (38%), Gaps = 8/117 (6%)
 Frame = +3

Query: 249 MASPASLATLGSTWPXXXXXXXXPCFALRWEXXXXXXXXXXXXXXXXXXXXXXKR-RMSS 425
           MASPASLA+LGS  P        PC   R                           R   
Sbjct: 1   MASPASLASLGSARPT-------PCCLPRCSNNSDKCKSTLVFLVAASGANHHHHHRHRL 53

Query: 426 SRLHAISGFDGGHWMPMPRRHWSFSSRPLGRT-----CKCMLTT--NLIEEKGVVSS 575
            RL  IS         +PR HW  S  P   T     CKCM TT  NLIEEKGV SS
Sbjct: 54  RRLQVISSTSSFSAWMIPRLHWPLSYSPTTNTSSTRICKCMATTTTNLIEEKGVSSS 110


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