BLASTX nr result
ID: Ophiopogon27_contig00011331
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00011331
(1200 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019239797.1| PREDICTED: ribonuclease H-like [Nicotiana at... 67 2e-09
ref|XP_019240594.1| PREDICTED: ribonuclease H-like [Nicotiana at... 66 3e-09
ref|XP_019261738.1| PREDICTED: uncharacterized protein LOC109239... 66 4e-09
ref|XP_018629080.1| PREDICTED: ribonuclease H-like [Nicotiana to... 65 6e-09
emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera] 63 1e-08
ref|XP_019236957.1| PREDICTED: uncharacterized protein LOC109217... 63 1e-08
ref|XP_016474391.1| PREDICTED: ribonuclease H-like [Nicotiana ta... 64 2e-08
ref|XP_019248399.1| PREDICTED: ribonuclease H-like [Nicotiana at... 64 3e-08
ref|XP_019224137.1| PREDICTED: uncharacterized protein LOC109205... 64 3e-08
gb|ESR34099.1| hypothetical protein CICLE_v10006218mg [Citrus cl... 62 3e-08
ref|XP_009587261.1| PREDICTED: ribonuclease H-like [Nicotiana to... 63 4e-08
ref|WP_071148580.1| ribonuclease H [Bacteroides sp. Marseille-P3... 64 5e-08
dbj|GAY65302.1| hypothetical protein CUMW_240040 [Citrus unshiu] 62 5e-08
dbj|GAK01363.1| LOW QUALITY PROTEIN: ribonuclease HI-related pro... 64 6e-08
ref|XP_009769528.1| PREDICTED: ribonuclease H-like [Nicotiana sy... 62 1e-07
ref|WP_042420732.1| ribonuclease H [Geomicrobium sp. JCM 19038] ... 62 3e-07
dbj|GAY63653.1| hypothetical protein CUMW_227390 [Citrus unshiu] 60 3e-07
ref|XP_016443676.1| PREDICTED: uncharacterized protein LOC107769... 60 3e-07
ref|XP_009587119.1| PREDICTED: uncharacterized protein LOC104084... 60 4e-07
gb|ESR41151.1| hypothetical protein CICLE_v10026935mg [Citrus cl... 59 4e-07
>ref|XP_019239797.1| PREDICTED: ribonuclease H-like [Nicotiana attenuata]
Length = 164
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVVF+G++PGLY +W C+ V G++G IFK Y +Y+EA AF + N +S SS
Sbjct: 72 VYVVFRGKKPGLYNSWCECASMVIGFKGNIFKSYKSYDEAVAAFNEFQKENIYS-EEQSS 130
Query: 772 DSCQQIGHRSASA 734
SC ASA
Sbjct: 131 SSCVDESDVGASA 143
Score = 62.0 bits (149), Expect = 9e-08
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAF 821
+YVVF+G+RPGLY +WH C+ V G +G+IFK + TY+EA AF
Sbjct: 12 VYVVFRGKRPGLYNSWHRCAPIVIGVKGSIFKAFKTYDEAITAF 55
>ref|XP_019240594.1| PREDICTED: ribonuclease H-like [Nicotiana attenuata]
Length = 164
Score = 66.2 bits (160), Expect = 3e-09
Identities = 32/73 (43%), Positives = 45/73 (61%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVVF+G++PGLY +W C+ V G++G+IFK Y +Y+EA AF + N +S SS
Sbjct: 72 VYVVFRGKKPGLYNSWCECAHMVIGFKGSIFKSYKSYDEAVAAFNEFQKENVYS-EEQSS 130
Query: 772 DSCQQIGHRSASA 734
SC ASA
Sbjct: 131 SSCVDESDVVASA 143
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTS 776
+YVVF+G+RPGLY +WH C+ V G +G+IFK + TY+EA AF + + + STS
Sbjct: 12 VYVVFRGKRPGLYNSWHQCALMVIGVKGSIFKAFKTYDEAIAAFNEFRNGSQADRLSTS 70
>ref|XP_019261738.1| PREDICTED: uncharacterized protein LOC109239607 [Nicotiana
attenuata]
Length = 164
Score = 65.9 bits (159), Expect = 4e-09
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVVF+G+RPGLY +W+ C+ V G++G+IFK Y +Y+EA F + N + + SS
Sbjct: 72 VYVVFRGKRPGLYNSWYDCAPMVIGFKGSIFKSYKSYDEAVTTFNEFQKENIY-IEEQSS 130
Query: 772 DSC 764
SC
Sbjct: 131 SSC 133
>ref|XP_018629080.1| PREDICTED: ribonuclease H-like [Nicotiana tomentosiformis]
Length = 170
Score = 65.5 bits (158), Expect = 6e-09
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVVF+G+RPGLY +W C+ V G++G+IFK Y +Y+EA AF + N S +SS
Sbjct: 72 VYVVFRGKRPGLYNSWCECAPMVIGFKGSIFKSYKSYDEAIAAFNEFQEENVDSEEPSSS 131
Query: 772 DSCQQIG 752
+ G
Sbjct: 132 SFVDESG 138
Score = 57.0 bits (136), Expect = 5e-06
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAF 821
+YVVF G+RP LY +WH C+ + G +G+ FK + +Y+EA AF
Sbjct: 12 VYVVFHGKRPRLYNSWHQCAPMITGIKGSFFKAFKSYDEAIAAF 55
>emb|CAN79317.1| hypothetical protein VITISV_008344 [Vitis vinifera]
Length = 118
Score = 63.2 bits (152), Expect = 1e-08
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = -3
Query: 949 YVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
YVVF GR+ G+Y +W C +QV GY+G ++K Y T+EEA+ A++ Y A + M STS+
Sbjct: 32 YVVFAGRKKGIYNSWPECQEQVVGYKGNVYKLYKTFEEARRAWMFY-EARVNFMESTST 89
>ref|XP_019236957.1| PREDICTED: uncharacterized protein LOC109217187 [Nicotiana
attenuata]
Length = 121
Score = 63.2 bits (152), Expect = 1e-08
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAF 821
+YVVF+G+RPGLY +WH C+ V G +G+IFK + TY+EA AF
Sbjct: 12 VYVVFRGKRPGLYNSWHRCAPMVIGVKGSIFKAFKTYDEAIAAF 55
>ref|XP_016474391.1| PREDICTED: ribonuclease H-like [Nicotiana tabacum]
Length = 170
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVVF+G+RPGLY +W C+ V G++G+IFK Y +Y+EA +F + N S +SS
Sbjct: 72 VYVVFRGKRPGLYNSWCECAPMVIGFKGSIFKSYKSYDEAIASFNEFQEENVDSEEPSSS 131
Query: 772 DSCQQIG 752
+ G
Sbjct: 132 SFVDESG 138
Score = 63.2 bits (152), Expect = 4e-08
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAF 821
+YVVF+G+RPGLY +WH C+ V G +G+IFK + +Y+EA AF
Sbjct: 12 VYVVFRGKRPGLYNSWHQCAPMVTGVKGSIFKAFKSYDEAIAAF 55
>ref|XP_019248399.1| PREDICTED: ribonuclease H-like [Nicotiana attenuata]
Length = 163
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAF 821
+YVVF+G+RPGLY +WH C+ V G +G+IFK + TY+EA AF
Sbjct: 12 VYVVFRGKRPGLYNSWHQCAPMVIGVKGSIFKAFKTYDEAIAAF 55
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVVF+G++PGLY +W C+ V G++G+IFK Y +Y+EA AF + N ++ SS
Sbjct: 72 VYVVFRGKKPGLYNSWCECAPLVIGFKGSIFKSYKSYDEAVAAFNEFQKENVYN-EEQSS 130
Query: 772 DSC 764
SC
Sbjct: 131 SSC 133
>ref|XP_019224137.1| PREDICTED: uncharacterized protein LOC109205836 [Nicotiana
attenuata]
Length = 164
Score = 63.5 bits (153), Expect = 3e-08
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAF 821
+YVVF+G+RPGLY +WH C+ V G +G+IFK + TY+EA AF
Sbjct: 12 VYVVFRGKRPGLYNSWHQCAPMVIGVKGSIFKAFKTYDEAIAAF 55
Score = 60.1 bits (144), Expect = 4e-07
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YV+++G+RPGLY +W C+ + G++G IFK Y +Y+EA A + N +S +SS
Sbjct: 72 VYVLYRGKRPGLYNSWCECAPMIIGFKGNIFKSYKSYDEAVAASNEFQKENVYSEEQSSS 131
>gb|ESR34099.1| hypothetical protein CICLE_v10006218mg [Citrus clementina]
dbj|GAY69595.1| hypothetical protein CUMW_290110 [Citrus unshiu]
Length = 124
Score = 62.4 bits (150), Expect = 3e-08
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = -3
Query: 949 YVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSSD 770
YVVFKGR+P +Y +W C QVNG++G +K Y + +A++A+ +Y H +
Sbjct: 7 YVVFKGRKPDIYNSWPECQMQVNGFKGNSYKSYTSLLDAEIAYNDY-----IKRHDKLRE 61
Query: 769 SCQQIGHRSASACTGTSTPEEQAPTRGD-IQNSTLENSLMINGLLAIVCLVLSV 611
+ + T + + PT +QN N +I +L+IVC +L +
Sbjct: 62 TSNMLETTKFIVETLEKEVQTEVPTCDKAVQNDKGRNDCIILHILSIVCCILGI 115
>ref|XP_009587261.1| PREDICTED: ribonuclease H-like [Nicotiana tomentosiformis]
Length = 170
Score = 63.2 bits (152), Expect = 4e-08
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAF 821
+YVVF+G+RPGLY +WH C+ V G +G+IFK + +Y+EA AF
Sbjct: 12 VYVVFRGKRPGLYNSWHQCAPMVTGVKGSIFKAFKSYDEAIAAF 55
Score = 60.5 bits (145), Expect = 3e-07
Identities = 27/67 (40%), Positives = 41/67 (61%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVVF+G+R GLY +W C+ V G++G+IFK Y +Y+EA +F + N S +SS
Sbjct: 72 VYVVFRGKRLGLYNSWCECAPMVIGFKGSIFKFYKSYDEAIASFNKFQEENIDSEEPSSS 131
Query: 772 DSCQQIG 752
+ G
Sbjct: 132 SFVDESG 138
>ref|WP_071148580.1| ribonuclease H [Bacteroides sp. Marseille-P3108]
Length = 215
Score = 63.9 bits (154), Expect = 5e-08
Identities = 36/101 (35%), Positives = 49/101 (48%)
Frame = -3
Query: 949 YVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSSD 770
YVV+ G PG+Y NW C Q NGY G FK ++T EEA+ AF +S
Sbjct: 8 YVVWAGVTPGIYDNWTDCQLQTNGYEGARFKSFDTMEEAEQAF--------------ASS 53
Query: 769 SCQQIGHRSASACTGTSTPEEQAPTRGDIQNSTLENSLMIN 647
IG ++ TGT P + A G + +ENSL ++
Sbjct: 54 PYDYIGQKA----TGTEQPRKAAAATGKLPPEVIENSLAVD 90
>dbj|GAY65302.1| hypothetical protein CUMW_240040 [Citrus unshiu]
Length = 124
Score = 61.6 bits (148), Expect = 5e-08
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = -3
Query: 949 YVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSSD 770
YVVFKGR+PG+Y +W C QVNG+RG +K Y + +A++A+ +Y H +S+
Sbjct: 7 YVVFKGRKPGIYNSWAECQMQVNGFRGNSYKSYTSLLDAEIAYNDY--IKRHEKLPETSN 64
Query: 769 SCQQIGHRSASACTGTSTPEEQAPT-RGDIQNSTLENSLMINGLLAIVCLVLSV 611
+ + G T + PT +Q + +I +L+IVC +L +
Sbjct: 65 MLETTKFIVETLEMGVQT---EVPTCDKTVQTDKGRDDCIILPILSIVCCILGI 115
>dbj|GAK01363.1| LOW QUALITY PROTEIN: ribonuclease HI-related protein 3
[Geomicrobium sp. JCM 19055]
Length = 213
Score = 63.5 bits (153), Expect = 6e-08
Identities = 34/88 (38%), Positives = 46/88 (52%)
Frame = -3
Query: 949 YVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSSD 770
YVV+KGR+PG+YT W C +V G++G FK Y TYEEA+ AF + G + S S
Sbjct: 7 YVVWKGRKPGIYTTWAECEAEVKGFKGARFKSYPTYEEAKQAFQS-GKSVVASTQKKQST 65
Query: 769 SCQQIGHRSASACTGTSTPEEQAPTRGD 686
R S T++ A T G+
Sbjct: 66 RTTNQNQRKTSLYYETTSISVDAGTHGN 93
>ref|XP_009769528.1| PREDICTED: ribonuclease H-like [Nicotiana sylvestris]
ref|XP_016486482.1| PREDICTED: ribonuclease H-like [Nicotiana tabacum]
Length = 168
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVV +G++PGLY +W C+ V G++G+IFK Y +Y+EA F + N +S +SS
Sbjct: 72 VYVVIRGKKPGLYNSWCECATMVIGFKGSIFKSYKSYDEAVATFNEFQKENIYSEEQSSS 131
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTS 776
+YVVF+G+R GLY +W+ C+ V G +G+IFK + TY+EA +AF + + + STS
Sbjct: 12 VYVVFRGKRLGLYNSWNRCAPMVIGVKGSIFKAFKTYDEAIIAFNEFRNGSQADNTSTS 70
>ref|WP_042420732.1| ribonuclease H [Geomicrobium sp. JCM 19038]
dbj|GAK10059.1| ribonuclease HI-related protein 3 [Geomicrobium sp. JCM 19038]
Length = 210
Score = 61.6 bits (148), Expect = 3e-07
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -3
Query: 949 YVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAF 821
YVV+KGR+PG+YT W C +V G++G FK Y TYEEA+ AF
Sbjct: 7 YVVWKGRKPGIYTTWAECESEVKGFKGARFKSYPTYEEAKRAF 49
>dbj|GAY63653.1| hypothetical protein CUMW_227390 [Citrus unshiu]
Length = 169
Score = 60.5 bits (145), Expect = 3e-07
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = -3
Query: 949 YVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNY 812
YVVFKGR+PG+Y +W C QVNG+RG +K Y + +A++A+ +Y
Sbjct: 67 YVVFKGRKPGIYNSWPECQMQVNGFRGNSYKSYTSLLDAEIAYTDY 112
>ref|XP_016443676.1| PREDICTED: uncharacterized protein LOC107769017 [Nicotiana tabacum]
Length = 170
Score = 60.5 bits (145), Expect = 3e-07
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVVF+G+RPGLY +W C++ V G++G+IFK Y +Y EA AF + N + +S+
Sbjct: 72 MYVVFRGKRPGLYNSWCECARMVIGFKGSIFKFYRSYNEAIAAFNKFQEENVDNEELSSN 131
>ref|XP_009587119.1| PREDICTED: uncharacterized protein LOC104084869 [Nicotiana
tomentosiformis]
Length = 156
Score = 60.1 bits (144), Expect = 4e-07
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSS 773
+YVVF+G+R GLY +W C+ V G++G+IFK Y +Y+EA AF + N S +SS
Sbjct: 72 VYVVFRGKRFGLYNSWCECAPMVIGFKGSIFKSYKSYDEAIAAFNEFQEENVDSEEPSSS 131
Score = 57.0 bits (136), Expect = 4e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = -3
Query: 952 IYVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAF 821
+YVVF+G+RPGL+ +WH C+ V +G+IFK + +Y+EA F
Sbjct: 12 VYVVFRGKRPGLHNSWHQCAPMVTSVKGSIFKAFKSYDEAIAEF 55
>gb|ESR41151.1| hypothetical protein CICLE_v10026935mg [Citrus clementina]
Length = 124
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Frame = -3
Query: 949 YVVFKGRRPGLYTNWHYCSQQVNGYRGTIFKCYNTYEEAQMAFLNYGSANFHSMHSTSSD 770
YVVFKGR+PG+Y +W C QVNG++G +K Y + + ++A+ +Y H
Sbjct: 7 YVVFKGRKPGIYNSWPECQMQVNGFKGNSYKSYTSLLDVKIAYNDY-----IKRHENLPK 61
Query: 769 SCQQIGHRSASACTGTSTPEEQAPT-RGDIQNSTLENSLMINGLLAIVCLVLSV 611
+ + + T + + + PT +Q N +I +L+IVC + +
Sbjct: 62 TSNMLENTKFIVETLENGVQTEVPTCDKTMQTDKGRNDCIILPILSIVCCIFGI 115