BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00011054
         (686 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020257944.1| pentatricopeptide repeat-containing protein ...   134   3e-32
ref|XP_017702069.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_008811661.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_008811660.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_010938990.1| PREDICTED: pentatricopeptide repeat-containi...    66   9e-09
ref|XP_010938989.1| PREDICTED: pentatricopeptide repeat-containi...    66   1e-08

>ref|XP_020257944.1| pentatricopeptide repeat-containing protein At5g67570, chloroplastic
            [Asparagus officinalis]
 gb|ONK76175.1| uncharacterized protein A4U43_C03F24720 [Asparagus officinalis]
          Length = 875

 Score =  134 bits (336), Expect = 3e-32
 Identities = 72/140 (51%), Positives = 91/140 (65%)
 Frame = -2

Query: 640  ERIRGHVPSNNTLIDDSDEGLQPRVNYFTXXXXXXXXXXXXSRHTAVHLQERIDFDALSS 461
            ERI+GH+  +  +  D +   + R N  T               T V+L E +DFD  SS
Sbjct: 737  ERIQGHLRCSTLIHSDGES--ESRGNDITSIASNCNGNFSIRHDTDVNLLEGVDFDVFSS 794

Query: 460  STTGNEGKQPDSYQKGKLNSSVGESSFDLLTDNVDSSFSELPSASDILDTWKKDRIKDGI 281
            S+ GNEGK  +S QKG  +S  GES FDLLTDN+D SFS+LPSASDIL+TWKKDRIKDGI
Sbjct: 795  SSIGNEGKWSESTQKGHSDSPNGESCFDLLTDNIDDSFSKLPSASDILETWKKDRIKDGI 854

Query: 280  FPFEYINSINQ*REHNGECY 221
            FPFEY++S  Q R ++ EC+
Sbjct: 855  FPFEYMSSNIQWRTYDEECH 874


>ref|XP_017702069.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic isoform X3 [Phoenix dactylifera]
          Length = 797

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/133 (34%), Positives = 75/133 (56%)
 Frame = -2

Query: 667  GSTMGMMHIERIRGHVPSNNTLIDDSDEGLQPRVNYFTXXXXXXXXXXXXSRHTAVHLQE 488
            G+  G  + + I+ H+P    L+DD    L  + +  +            S   ++ LQE
Sbjct: 668  GNDEGDNNCDEIQAHIPGK-MLVDDDGSPLCSQED--SLMSERPLDRTEGSHSMSISLQE 724

Query: 487  RIDFDALSSSTTGNEGKQPDSYQKGKLNSSVGESSFDLLTDNVDSSFSELPSASDILDTW 308
            R++ +  SSS  GNEG + +S   G   + + +++ + LT +    FSE+PSAS+IL+TW
Sbjct: 725  RVN-NVASSSFAGNEGNELNSVFHGYTETPITDAALNSLTADTGRPFSEMPSASEILETW 783

Query: 307  KKDRIKDGIFPFE 269
            K+DR+KDGIFPF+
Sbjct: 784  KQDRLKDGIFPFQ 796


>ref|XP_008811661.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic isoform X2 [Phoenix dactylifera]
          Length = 871

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/133 (34%), Positives = 75/133 (56%)
 Frame = -2

Query: 667  GSTMGMMHIERIRGHVPSNNTLIDDSDEGLQPRVNYFTXXXXXXXXXXXXSRHTAVHLQE 488
            G+  G  + + I+ H+P    L+DD    L  + +  +            S   ++ LQE
Sbjct: 742  GNDEGDNNCDEIQAHIPGK-MLVDDDGSPLCSQED--SLMSERPLDRTEGSHSMSISLQE 798

Query: 487  RIDFDALSSSTTGNEGKQPDSYQKGKLNSSVGESSFDLLTDNVDSSFSELPSASDILDTW 308
            R++ +  SSS  GNEG + +S   G   + + +++ + LT +    FSE+PSAS+IL+TW
Sbjct: 799  RVN-NVASSSFAGNEGNELNSVFHGYTETPITDAALNSLTADTGRPFSEMPSASEILETW 857

Query: 307  KKDRIKDGIFPFE 269
            K+DR+KDGIFPF+
Sbjct: 858  KQDRLKDGIFPFQ 870


>ref|XP_008811660.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic isoform X1 [Phoenix dactylifera]
          Length = 881

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/133 (34%), Positives = 75/133 (56%)
 Frame = -2

Query: 667  GSTMGMMHIERIRGHVPSNNTLIDDSDEGLQPRVNYFTXXXXXXXXXXXXSRHTAVHLQE 488
            G+  G  + + I+ H+P    L+DD    L  + +  +            S   ++ LQE
Sbjct: 752  GNDEGDNNCDEIQAHIPGK-MLVDDDGSPLCSQED--SLMSERPLDRTEGSHSMSISLQE 808

Query: 487  RIDFDALSSSTTGNEGKQPDSYQKGKLNSSVGESSFDLLTDNVDSSFSELPSASDILDTW 308
            R++ +  SSS  GNEG + +S   G   + + +++ + LT +    FSE+PSAS+IL+TW
Sbjct: 809  RVN-NVASSSFAGNEGNELNSVFHGYTETPITDAALNSLTADTGRPFSEMPSASEILETW 867

Query: 307  KKDRIKDGIFPFE 269
            K+DR+KDGIFPF+
Sbjct: 868  KQDRLKDGIFPFQ 880


>ref|XP_010938990.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic isoform X2 [Elaeis guineensis]
          Length = 871

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 31/65 (47%), Positives = 45/65 (69%)
 Frame = -2

Query: 463  SSTTGNEGKQPDSYQKGKLNSSVGESSFDLLTDNVDSSFSELPSASDILDTWKKDRIKDG 284
            SS  GNEGK+  S   G   + + +++ + LT +    FSELPSA +IL+TWK++R+KDG
Sbjct: 806  SSFVGNEGKELHSVFHGYSETPITDAALESLTAHTGRPFSELPSAFEILETWKQERMKDG 865

Query: 283  IFPFE 269
            IFPF+
Sbjct: 866  IFPFQ 870


>ref|XP_010938989.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
            chloroplastic isoform X1 [Elaeis guineensis]
          Length = 881

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/65 (47%), Positives = 45/65 (69%)
 Frame = -2

Query: 463  SSTTGNEGKQPDSYQKGKLNSSVGESSFDLLTDNVDSSFSELPSASDILDTWKKDRIKDG 284
            SS  GNEGK+  S   G   + + +++ + LT +    FSELPSA +IL+TWK++R+KDG
Sbjct: 816  SSFVGNEGKELHSVFHGYSETPITDAALESLTAHTGRPFSELPSAFEILETWKQERMKDG 875

Query: 283  IFPFE 269
            IFPF+
Sbjct: 876  IFPFQ 880