BLASTX nr result
ID: Ophiopogon27_contig00010832
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00010832
(546 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020247405.1| pre-mRNA-processing factor 19 [Asparagus off... 92 2e-18
ref|XP_020094280.1| pre-mRNA-processing factor 19-like [Ananas c... 89 2e-17
ref|XP_020259907.1| pre-mRNA-processing factor 19-like [Asparagu... 87 9e-17
gb|ONM06006.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays... 80 1e-16
ref|XP_003558846.1| PREDICTED: pre-mRNA-processing factor 19-lik... 86 3e-16
gb|ABR25746.1| pre-mRNA-splicing factor 19, partial [Oryza sativ... 79 5e-16
gb|AQK65178.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays] 79 1e-15
ref|XP_009382203.1| PREDICTED: pre-mRNA-processing factor 19 [Mu... 83 3e-15
ref|XP_008785160.1| PREDICTED: pre-mRNA-processing factor 19-lik... 83 3e-15
ref|XP_010920296.1| PREDICTED: pre-mRNA-processing factor 19 [El... 82 5e-15
ref|XP_020169930.1| pre-mRNA-processing factor 19-like [Aegilops... 82 7e-15
gb|EMS55665.1| U-box domain-containing protein 72 [Triticum urartu] 82 7e-15
gb|OVA10375.1| WD40 repeat [Macleaya cordata] 81 1e-14
gb|ONM06005.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays... 80 2e-14
ref|XP_024032190.1| pre-mRNA-processing factor 19 [Morus notabil... 80 2e-14
gb|PAN46985.1| hypothetical protein PAHAL_I03110 [Panicum hallii] 80 2e-14
ref|XP_021306386.1| pre-mRNA-processing factor 19 [Sorghum bicol... 80 2e-14
ref|XP_009411388.1| PREDICTED: pre-mRNA-processing factor 19 [Mu... 80 2e-14
ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] >gi|6... 80 2e-14
ref|XP_004982929.1| pre-mRNA-processing factor 19 [Setaria italica] 80 2e-14
>ref|XP_020247405.1| pre-mRNA-processing factor 19 [Asparagus officinalis]
Length = 521
Score = 92.0 bits (227), Expect = 2e-18
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDEMEEAK 143
KTF DLSGTGKVTS KFGGDAKYLAVGSMDRNLRIFGLPGDEMEE+K
Sbjct: 475 KTFPDLSGTGKVTSAKFGGDAKYLAVGSMDRNLRIFGLPGDEMEESK 521
>ref|XP_020094280.1| pre-mRNA-processing factor 19-like [Ananas comosus]
Length = 527
Score = 89.4 bits (220), Expect = 2e-17
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDEMEEAK 143
KTF DLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGLPGDE EEAK
Sbjct: 477 KTFPDLSGTGKVTSVKFGADAKYMAVGSMDRNLRIFGLPGDEAEEAK 523
>ref|XP_020259907.1| pre-mRNA-processing factor 19-like [Asparagus officinalis]
gb|ONK70833.1| uncharacterized protein A4U43_C04F2000 [Asparagus officinalis]
Length = 524
Score = 87.4 bits (215), Expect = 9e-17
Identities = 44/49 (89%), Positives = 46/49 (93%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLP--GDEMEEAK 143
KTF DLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLP GDEMEE++
Sbjct: 475 KTFPDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPEAGDEMEESR 523
>gb|ONM06006.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays]
gb|ONM06010.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays]
Length = 87
Score = 80.5 bits (197), Expect = 1e-16
Identities = 40/47 (85%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPG-DEMEEA 140
KT DLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGLPG D+MEE+
Sbjct: 36 KTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEES 82
>ref|XP_003558846.1| PREDICTED: pre-mRNA-processing factor 19-like [Brachypodium
distachyon]
gb|KQK23734.1| hypothetical protein BRADI_1g75750v3 [Brachypodium distachyon]
Length = 527
Score = 85.9 bits (211), Expect = 3e-16
Identities = 44/51 (86%), Positives = 46/51 (90%), Gaps = 1/51 (1%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDE-MEEAK*PI 152
KT DLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGLPGDE MEEAK P+
Sbjct: 475 KTLPDLSGTGKVTSVKFGTDAKYVAVGSMDRNLRIFGLPGDEQMEEAKSPV 525
>gb|ABR25746.1| pre-mRNA-splicing factor 19, partial [Oryza sativa Indica Group]
Length = 85
Score = 79.0 bits (193), Expect = 5e-16
Identities = 39/49 (79%), Positives = 44/49 (89%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPG--DEMEEAK 143
KT DLSGTGKVT+VKFG DAKY+AVGSMDRNLRIFGLPG D+M++AK
Sbjct: 33 KTLPDLSGTGKVTNVKFGTDAKYIAVGSMDRNLRIFGLPGEDDQMDDAK 81
>gb|AQK65178.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays]
Length = 127
Score = 79.0 bits (193), Expect = 1e-15
Identities = 39/47 (82%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPG-DEMEEA 140
KT DLSGTGKVTSVKFG DAKY+A+GSMDRNLRIFGLPG D+MEE+
Sbjct: 76 KTLPDLSGTGKVTSVKFGVDAKYIAIGSMDRNLRIFGLPGDDQMEES 122
>ref|XP_009382203.1| PREDICTED: pre-mRNA-processing factor 19 [Musa acuminata subsp.
malaccensis]
Length = 526
Score = 83.2 bits (204), Expect = 3e-15
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDEMEEAK*P 149
KTF DLSGTGKVT VKFG DAKY+AVGSMDRNLR+FGLPGD+ EE + P
Sbjct: 476 KTFPDLSGTGKVTCVKFGADAKYMAVGSMDRNLRMFGLPGDDSEEPRSP 524
>ref|XP_008785160.1| PREDICTED: pre-mRNA-processing factor 19-like [Phoenix dactylifera]
Length = 526
Score = 83.2 bits (204), Expect = 3e-15
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDEMEEAK*P 149
KTF DLSGTGKVT +KFG DAKY+AVGSMDRNLRIFGLPG++ EE K P
Sbjct: 476 KTFADLSGTGKVTCIKFGADAKYMAVGSMDRNLRIFGLPGNDSEEPKSP 524
>ref|XP_010920296.1| PREDICTED: pre-mRNA-processing factor 19 [Elaeis guineensis]
Length = 526
Score = 82.4 bits (202), Expect = 5e-15
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDEMEEAK*P 149
KTF DLSGTGKVT VKFG DAKY+AVGSMDRNLRIFGLPGD EE + P
Sbjct: 476 KTFTDLSGTGKVTCVKFGADAKYMAVGSMDRNLRIFGLPGDGPEEPRSP 524
>ref|XP_020169930.1| pre-mRNA-processing factor 19-like [Aegilops tauschii subsp.
tauschii]
Length = 531
Score = 82.0 bits (201), Expect = 7e-15
Identities = 41/48 (85%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDE-MEEAK 143
KT DLSGTGKVTSVKFG DAKY+AVGSMD NLR+FGLPGDE MEEAK
Sbjct: 478 KTLPDLSGTGKVTSVKFGADAKYVAVGSMDHNLRVFGLPGDEQMEEAK 525
>gb|EMS55665.1| U-box domain-containing protein 72 [Triticum urartu]
Length = 588
Score = 82.0 bits (201), Expect = 7e-15
Identities = 41/48 (85%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDE-MEEAK 143
KT DLSGTGKVTSVKFG DAKY+AVGSMD NLR+FGLPGDE MEEAK
Sbjct: 535 KTLPDLSGTGKVTSVKFGADAKYVAVGSMDHNLRVFGLPGDEQMEEAK 582
>gb|OVA10375.1| WD40 repeat [Macleaya cordata]
Length = 515
Score = 81.3 bits (199), Expect = 1e-14
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDEMEE 137
KTF DLSGTGK TSVKFG DAKY+AVGSMDRNLRIFGLPGD EE
Sbjct: 470 KTFPDLSGTGKATSVKFGPDAKYMAVGSMDRNLRIFGLPGDASEE 514
>gb|ONM06005.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays]
gb|ONM06007.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays]
Length = 506
Score = 80.5 bits (197), Expect = 2e-14
Identities = 40/47 (85%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPG-DEMEEA 140
KT DLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGLPG D+MEE+
Sbjct: 455 KTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEES 501
>ref|XP_024032190.1| pre-mRNA-processing factor 19 [Morus notabilis]
ref|XP_024032197.1| pre-mRNA-processing factor 19 [Morus notabilis]
ref|XP_024032202.1| pre-mRNA-processing factor 19 [Morus notabilis]
Length = 521
Score = 80.5 bits (197), Expect = 2e-14
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGD 125
KTF DLSGTGKVTSVKFG DAKYLAVGSMDRNLRIFGLPGD
Sbjct: 475 KTFPDLSGTGKVTSVKFGPDAKYLAVGSMDRNLRIFGLPGD 515
>gb|PAN46985.1| hypothetical protein PAHAL_I03110 [Panicum hallii]
Length = 526
Score = 80.5 bits (197), Expect = 2e-14
Identities = 40/47 (85%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPG-DEMEEA 140
KT DLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGLPG D+MEE+
Sbjct: 475 KTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEES 521
>ref|XP_021306386.1| pre-mRNA-processing factor 19 [Sorghum bicolor]
gb|KXG38386.1| hypothetical protein SORBI_3001G226000 [Sorghum bicolor]
Length = 526
Score = 80.5 bits (197), Expect = 2e-14
Identities = 40/47 (85%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPG-DEMEEA 140
KT DLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGLPG D+MEE+
Sbjct: 475 KTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEES 521
>ref|XP_009411388.1| PREDICTED: pre-mRNA-processing factor 19 [Musa acuminata subsp.
malaccensis]
Length = 526
Score = 80.5 bits (197), Expect = 2e-14
Identities = 39/49 (79%), Positives = 41/49 (83%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPGDEMEEAK*P 149
K DLSGTGKV+ VKFG DAKY+AVGSMDRNLRIFGLPGDE EE K P
Sbjct: 476 KILPDLSGTGKVSCVKFGADAKYMAVGSMDRNLRIFGLPGDESEEPKSP 524
>ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays]
ref|XP_008678422.1| pre-mRNA-splicing factor 19 isoform X1 [Zea mays]
gb|ACG39790.1| pre-mRNA-splicing factor 19 [Zea mays]
gb|ACN34262.1| unknown [Zea mays]
gb|ONM06008.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays]
gb|ONM06009.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays]
gb|ONM06011.1| Pre-mRNA-processing factor 19 homolog 2 [Zea mays]
Length = 526
Score = 80.5 bits (197), Expect = 2e-14
Identities = 40/47 (85%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPG-DEMEEA 140
KT DLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGLPG D+MEE+
Sbjct: 475 KTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEES 521
>ref|XP_004982929.1| pre-mRNA-processing factor 19 [Setaria italica]
Length = 526
Score = 80.5 bits (197), Expect = 2e-14
Identities = 40/47 (85%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
Frame = +3
Query: 3 KTFQDLSGTGKVTSVKFGGDAKYLAVGSMDRNLRIFGLPG-DEMEEA 140
KT DLSGTGKVTSVKFG DAKY+AVGSMDRNLRIFGLPG D+MEE+
Sbjct: 475 KTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEES 521