BLASTX nr result
ID: Ophiopogon27_contig00010786
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00010786
(890 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020264940.1| nuclear poly(A) polymerase 4-like [Asparagus... 321 e-101
gb|ONK69791.1| uncharacterized protein A4U43_C05F26770 [Asparagu... 321 e-100
ref|XP_009421293.1| PREDICTED: nuclear poly(A) polymerase 4-like... 244 6e-72
gb|OAY36595.1| hypothetical protein MANES_11G032900 [Manihot esc... 236 2e-71
ref|XP_020575154.1| nuclear poly(A) polymerase 4-like [Phalaenop... 241 4e-71
ref|XP_021629092.1| nuclear poly(A) polymerase 4-like isoform X2... 241 1e-70
ref|XP_021629093.1| nuclear poly(A) polymerase 4-like isoform X3... 236 5e-70
ref|XP_009421292.1| PREDICTED: nuclear poly(A) polymerase 4-like... 239 7e-70
ref|XP_021629091.1| nuclear poly(A) polymerase 4-like isoform X1... 236 7e-69
ref|XP_009421294.1| PREDICTED: nuclear poly(A) polymerase 4-like... 230 7e-67
ref|XP_021654661.1| nuclear poly(A) polymerase 4-like [Hevea bra... 226 4e-65
gb|KHG18561.1| Poly (A) polymerase [Gossypium arboreum] >gi|7288... 226 4e-65
ref|XP_017609533.1| PREDICTED: nuclear poly(A) polymerase 4-like... 225 5e-65
ref|XP_016668918.1| PREDICTED: nuclear poly(A) polymerase 4-like... 225 8e-65
gb|PKA65324.1| poly(A) polymerase [Apostasia shenzhenica] 224 9e-65
gb|PPR98139.1| hypothetical protein GOBAR_AA22530 [Gossypium bar... 224 1e-64
ref|XP_022715040.1| nuclear poly(A) polymerase 4-like isoform X2... 223 6e-64
ref|XP_010267125.1| PREDICTED: nuclear poly(A) polymerase 4-like... 222 8e-64
gb|EOY26946.1| Nucleic acid binding protein, putative isoform 3 ... 222 9e-64
ref|XP_016672070.1| PREDICTED: nuclear poly(A) polymerase 4-like... 221 1e-63
>ref|XP_020264940.1| nuclear poly(A) polymerase 4-like [Asparagus officinalis]
Length = 683
Score = 321 bits (822), Expect = e-101
Identities = 175/299 (58%), Positives = 208/299 (69%), Gaps = 3/299 (1%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTLKIERDT GMLQC PYPNEYVDTSKQC HCAFFMGLQRKQG +VQEGQ
Sbjct: 389 KGWVESRLRQLTLKIERDTFGMLQCHPYPNEYVDTSKQCVHCAFFMGLQRKQGAKVQEGQ 448
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFR+SVNMYMYWKPGME+YVSHVRRRQIPSFV PEGF+RPRP KPT QQ
Sbjct: 449 QFDIRGTVDEFRNSVNMYMYWKPGMEIYVSHVRRRQIPSFVFPEGFKRPRPSKPTNQQ-- 506
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDEDIGKEKLERLLSVSPDHAKLSLPDPXXXXXX 541
RQ KRK+S DEDIG+++LE+ LS SPD K +P
Sbjct: 507 KSDRIENEVDECDGRSSERQFKRKKSPDEDIGRQRLEKRLSSSPDPEKHFPSEP---GSG 563
Query: 542 XXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCANAESG---EGGRFKESVQT 712
IKV+ SP+T + ++ G+ S ++G +++++G E G E VQ+
Sbjct: 564 GSDGASIKVERSPNTLQYPVTKVDEGSKLTS-PDSGNKIPSDSDTGFSCERGCTDELVQS 622
Query: 713 NMRKTVSEVTFLESERVLESDLAKELEPNASSIGVVLKGRGGVGSESVQKPVIRLSLTS 889
+++ V E ES +ESDLA + +PNAS++GVVL RGGV SE VQKPV+RLSLTS
Sbjct: 623 RIQEKVLEAALAESNHGVESDLAGDFQPNASALGVVLTDRGGVSSEPVQKPVMRLSLTS 681
>gb|ONK69791.1| uncharacterized protein A4U43_C05F26770 [Asparagus officinalis]
Length = 806
Score = 321 bits (822), Expect = e-100
Identities = 175/299 (58%), Positives = 208/299 (69%), Gaps = 3/299 (1%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTLKIERDT GMLQC PYPNEYVDTSKQC HCAFFMGLQRKQG +VQEGQ
Sbjct: 512 KGWVESRLRQLTLKIERDTFGMLQCHPYPNEYVDTSKQCVHCAFFMGLQRKQGAKVQEGQ 571
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFR+SVNMYMYWKPGME+YVSHVRRRQIPSFV PEGF+RPRP KPT QQ
Sbjct: 572 QFDIRGTVDEFRNSVNMYMYWKPGMEIYVSHVRRRQIPSFVFPEGFKRPRPSKPTNQQ-- 629
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDEDIGKEKLERLLSVSPDHAKLSLPDPXXXXXX 541
RQ KRK+S DEDIG+++LE+ LS SPD K +P
Sbjct: 630 KSDRIENEVDECDGRSSERQFKRKKSPDEDIGRQRLEKRLSSSPDPEKHFPSEP---GSG 686
Query: 542 XXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCANAESG---EGGRFKESVQT 712
IKV+ SP+T + ++ G+ S ++G +++++G E G E VQ+
Sbjct: 687 GSDGASIKVERSPNTLQYPVTKVDEGSKLTS-PDSGNKIPSDSDTGFSCERGCTDELVQS 745
Query: 713 NMRKTVSEVTFLESERVLESDLAKELEPNASSIGVVLKGRGGVGSESVQKPVIRLSLTS 889
+++ V E ES +ESDLA + +PNAS++GVVL RGGV SE VQKPV+RLSLTS
Sbjct: 746 RIQEKVLEAALAESNHGVESDLAGDFQPNASALGVVLTDRGGVSSEPVQKPVMRLSLTS 804
>ref|XP_009421293.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 698
Score = 244 bits (622), Expect = 6e-72
Identities = 149/314 (47%), Positives = 184/314 (58%), Gaps = 18/314 (5%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTLKIERDT GMLQC PYPNEY D SKQC+HCAFFMGLQRKQGV++QEGQ
Sbjct: 390 KGWVESRLRQLTLKIERDTYGMLQCHPYPNEYEDPSKQCSHCAFFMGLQRKQGVKIQEGQ 449
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFRH VNMYM+WKPGMELYVSHVRR+QIPS+V PEG++RPRP + QQ+
Sbjct: 450 QFDIRGTVDEFRHEVNMYMFWKPGMELYVSHVRRKQIPSYVFPEGYKRPRPSRVICQQLV 509
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
R+LKRK +D K E+ S+SP H KL D
Sbjct: 510 DKTSGEDIGEECEGGSSERRLKRKGDADCSGARPNKPEKRASISPTHEKLPTTDQQDHEV 569
Query: 539 XXXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCC----ANAE---------SG 679
V+ S + R + N G SF E G + N+E +G
Sbjct: 570 KGIEDC---VEASCGNDKDDNAR-KLAN-GSSFLECGEASAGDLFCNSEMIKVDLEQFAG 624
Query: 680 EG----GRFKESVQTNMRKTVSEVTFLESERVLESDLAKELEPNASSIGVVLKGRGGVGS 847
G +E V + + T E L++ ++ +A EPN ++GV L+ G V +
Sbjct: 625 SNCTIVGGSQELVDDDKQGTSPETEHLKNGSA-QNGVADVSEPNL-ALGVALEAHGSVTA 682
Query: 848 ESVQKPVIRLSLTS 889
++ QKP +RLSLTS
Sbjct: 683 DAPQKPALRLSLTS 696
>gb|OAY36595.1| hypothetical protein MANES_11G032900 [Manihot esculenta]
Length = 453
Score = 236 bits (602), Expect = 2e-71
Identities = 153/329 (46%), Positives = 188/329 (57%), Gaps = 33/329 (10%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PYP+EYVD SK CAHCAFFMGLQRKQG +QEGQ
Sbjct: 125 KGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDISKPCAHCAFFMGLQRKQGEIIQEGQ 184
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFRHS+NMYM+WKPGME+YVSHVRR+QIPS+V P+G+RRPR + QQ
Sbjct: 185 QFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRPRHPRVQSQQQ- 243
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDE-DIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
R LKRK+ D D+ + E+ S+SP P+
Sbjct: 244 SDKPCCEDGGACRIGSGERCLKRKKDPDAVDVKNDMPEKRRSISPQRRDSISPEIISHKF 303
Query: 539 XXXXXXXIKVDGSP----DTTLFEPERIPIGNLGRS----FEEAGVSCC--------ANA 670
+GS DT F P+ + G S F + V C A +
Sbjct: 304 GGTSPCLAFAEGSETCEVDTKRFCPDDVEGGCTSNSSVITFLSSEVGSCKDIGNESVAGS 363
Query: 671 ESGEGGRFKESVQ--TNMRKTVSE------VTFLES-----ERVLESDLAKELE--PNAS 805
G G SV+ N+R + S+ V LE+ V + L +ELE PNA
Sbjct: 364 SKGNNGSAYGSVEGSNNLRSSQSDSGDAGSVCRLENVCGDGNGVCQDGLREELEVKPNA- 422
Query: 806 SIGVVLKGRGGVGSESVQKPVI-RLSLTS 889
++G++LK GGV +E+VQKPV+ RLSLTS
Sbjct: 423 AVGMLLKSVGGVEAEAVQKPVLSRLSLTS 451
>ref|XP_020575154.1| nuclear poly(A) polymerase 4-like [Phalaenopsis equestris]
Length = 677
Score = 241 bits (615), Expect = 4e-71
Identities = 116/173 (67%), Positives = 133/173 (76%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTLKIERDTCGMLQC PYPNEYVD+SK+C+HCAFFMGLQRKQGVR+QEGQ
Sbjct: 389 KGWVESRLRQLTLKIERDTCGMLQCHPYPNEYVDSSKRCSHCAFFMGLQRKQGVRIQEGQ 448
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEF+HSVNMYM+WKPGME+ VSHVRR+QIPSFV PEG++RPRP KPT +
Sbjct: 449 QFDIRGTVDEFKHSVNMYMFWKPGMEINVSHVRRKQIPSFVFPEGYKRPRPSKPT--NLQ 506
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDEDIGKEKLERLLSVSPDHAKLSLPD 520
R LKRK S +ED G+ E+L S+SP+ K P+
Sbjct: 507 NPEKVNGGEDERDGGSSERSLKRKMSVEEDDGRSSPEKLASLSPNKRKSPSPE 559
>ref|XP_021629092.1| nuclear poly(A) polymerase 4-like isoform X2 [Manihot esculenta]
gb|OAY36594.1| hypothetical protein MANES_11G032900 [Manihot esculenta]
Length = 715
Score = 241 bits (614), Expect = 1e-70
Identities = 153/328 (46%), Positives = 188/328 (57%), Gaps = 32/328 (9%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PYP+EYVD SK CAHCAFFMGLQRKQG +QEGQ
Sbjct: 388 KGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDISKPCAHCAFFMGLQRKQGEIIQEGQ 447
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFRHS+NMYM+WKPGME+YVSHVRR+QIPS+V P+G+RRPR + QQ
Sbjct: 448 QFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRPRHPRVQSQQQ- 506
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDE-DIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
R LKRK+ D D+ + E+ S+SP P+
Sbjct: 507 SDKPCCEDGGACRIGSGERCLKRKKDPDAVDVKNDMPEKRRSISPQRRDSISPEIISHKF 566
Query: 539 XXXXXXXIKVDGSP----DTTLFEPERIPIGNLGRS----FEEAGVSCC--------ANA 670
+GS DT F P+ + G S F + V C A +
Sbjct: 567 GGTSPCLAFAEGSETCEVDTKRFCPDDVEGGCTSNSSVITFLSSEVGSCKDIGNESVAGS 626
Query: 671 ESGEGGRFKESVQ--TNMRKTVSE------VTFLES-----ERVLESDLAKELE--PNAS 805
G G SV+ N+R + S+ V LE+ V + L +ELE PNA
Sbjct: 627 SKGNNGSAYGSVEGSNNLRSSQSDSGDAGSVCRLENVCGDGNGVCQDGLREELEVKPNA- 685
Query: 806 SIGVVLKGRGGVGSESVQKPVIRLSLTS 889
++G++LK GGV +E+VQKPV+RLSLTS
Sbjct: 686 AVGMLLKSVGGVEAEAVQKPVLRLSLTS 713
>ref|XP_021629093.1| nuclear poly(A) polymerase 4-like isoform X3 [Manihot esculenta]
Length = 580
Score = 236 bits (602), Expect = 5e-70
Identities = 153/329 (46%), Positives = 188/329 (57%), Gaps = 33/329 (10%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PYP+EYVD SK CAHCAFFMGLQRKQG +QEGQ
Sbjct: 252 KGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDISKPCAHCAFFMGLQRKQGEIIQEGQ 311
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFRHS+NMYM+WKPGME+YVSHVRR+QIPS+V P+G+RRPR + QQ
Sbjct: 312 QFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRPRHPRVQSQQQ- 370
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDE-DIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
R LKRK+ D D+ + E+ S+SP P+
Sbjct: 371 SDKPCCEDGGACRIGSGERCLKRKKDPDAVDVKNDMPEKRRSISPQRRDSISPEIISHKF 430
Query: 539 XXXXXXXIKVDGSP----DTTLFEPERIPIGNLGRS----FEEAGVSCC--------ANA 670
+GS DT F P+ + G S F + V C A +
Sbjct: 431 GGTSPCLAFAEGSETCEVDTKRFCPDDVEGGCTSNSSVITFLSSEVGSCKDIGNESVAGS 490
Query: 671 ESGEGGRFKESVQ--TNMRKTVSE------VTFLES-----ERVLESDLAKELE--PNAS 805
G G SV+ N+R + S+ V LE+ V + L +ELE PNA
Sbjct: 491 SKGNNGSAYGSVEGSNNLRSSQSDSGDAGSVCRLENVCGDGNGVCQDGLREELEVKPNA- 549
Query: 806 SIGVVLKGRGGVGSESVQKPVI-RLSLTS 889
++G++LK GGV +E+VQKPV+ RLSLTS
Sbjct: 550 AVGMLLKSVGGVEAEAVQKPVLSRLSLTS 578
>ref|XP_009421292.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 718
Score = 239 bits (609), Expect = 7e-70
Identities = 144/329 (43%), Positives = 178/329 (54%), Gaps = 33/329 (10%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTLKIERDT GMLQC PYPNEY D SKQC+HCAFFMGLQRKQGV++QEGQ
Sbjct: 390 KGWVESRLRQLTLKIERDTYGMLQCHPYPNEYEDPSKQCSHCAFFMGLQRKQGVKIQEGQ 449
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFRH VNMYM+WKPGMELYVSHVRR+QIPS+V PEG++RPRP + QQ+
Sbjct: 450 QFDIRGTVDEFRHEVNMYMFWKPGMELYVSHVRRKQIPSYVFPEGYKRPRPSRVICQQLV 509
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLERLLSVSPDHAKLSLPD------ 520
R+LKRK +D K E+ S+SP H KL D
Sbjct: 510 DKTSGEDIGEECEGGSSERRLKRKGDADCSGARPNKPEKRASISPTHEKLPTTDQQDHEE 569
Query: 521 ----PXXXXXXXXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCANAESGE-- 682
+ V G D N + + C A +G+
Sbjct: 570 VIFNDSVDVRANSLKDLMAVKGIEDCVEASCGNDKDDNARKLANGSSFLECGEASAGDLF 629
Query: 683 --------------------GGRFKESVQTNMRKTVSEVTFLESERVLESDLAKELEPNA 802
G +E V + + T E L++ ++ +A EPN
Sbjct: 630 CNSEMIKVDLEQFAGSNCTIVGGSQELVDDDKQGTSPETEHLKNGSA-QNGVADVSEPNL 688
Query: 803 SSIGVVLKGRGGVGSESVQKPVIRLSLTS 889
++GV L+ G V +++ QKP +RLSLTS
Sbjct: 689 -ALGVALEAHGSVTADAPQKPALRLSLTS 716
>ref|XP_021629091.1| nuclear poly(A) polymerase 4-like isoform X1 [Manihot esculenta]
Length = 716
Score = 236 bits (602), Expect = 7e-69
Identities = 153/329 (46%), Positives = 188/329 (57%), Gaps = 33/329 (10%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PYP+EYVD SK CAHCAFFMGLQRKQG +QEGQ
Sbjct: 388 KGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDISKPCAHCAFFMGLQRKQGEIIQEGQ 447
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFRHS+NMYM+WKPGME+YVSHVRR+QIPS+V P+G+RRPR + QQ
Sbjct: 448 QFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRPRHPRVQSQQQ- 506
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDE-DIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
R LKRK+ D D+ + E+ S+SP P+
Sbjct: 507 SDKPCCEDGGACRIGSGERCLKRKKDPDAVDVKNDMPEKRRSISPQRRDSISPEIISHKF 566
Query: 539 XXXXXXXIKVDGSP----DTTLFEPERIPIGNLGRS----FEEAGVSCC--------ANA 670
+GS DT F P+ + G S F + V C A +
Sbjct: 567 GGTSPCLAFAEGSETCEVDTKRFCPDDVEGGCTSNSSVITFLSSEVGSCKDIGNESVAGS 626
Query: 671 ESGEGGRFKESVQ--TNMRKTVSE------VTFLES-----ERVLESDLAKELE--PNAS 805
G G SV+ N+R + S+ V LE+ V + L +ELE PNA
Sbjct: 627 SKGNNGSAYGSVEGSNNLRSSQSDSGDAGSVCRLENVCGDGNGVCQDGLREELEVKPNA- 685
Query: 806 SIGVVLKGRGGVGSESVQKPVI-RLSLTS 889
++G++LK GGV +E+VQKPV+ RLSLTS
Sbjct: 686 AVGMLLKSVGGVEAEAVQKPVLSRLSLTS 714
>ref|XP_009421294.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X3 [Musa
acuminata subsp. malaccensis]
Length = 695
Score = 230 bits (587), Expect = 7e-67
Identities = 113/174 (64%), Positives = 127/174 (72%), Gaps = 1/174 (0%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTLKIERDT GMLQC PYPNEY D SKQC+HCAFFMGLQRKQGV++QEGQ
Sbjct: 390 KGWVESRLRQLTLKIERDTYGMLQCHPYPNEYEDPSKQCSHCAFFMGLQRKQGVKIQEGQ 449
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFRH VNMYM+WKPGMELYVSHVRR+QIPS+V PEG++RPRP + QQ+
Sbjct: 450 QFDIRGTVDEFRHEVNMYMFWKPGMELYVSHVRRKQIPSYVFPEGYKRPRPSRVICQQLV 509
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLERLLSVSPDHAKLSLPD 520
R+LKRK +D K E+ S+SP H KL D
Sbjct: 510 DKTSGEDIGEECEGGSSERRLKRKGDADCSGARPNKPEKRASISPTHEKLPTTD 563
>ref|XP_021654661.1| nuclear poly(A) polymerase 4-like [Hevea brasiliensis]
Length = 708
Score = 226 bits (576), Expect = 4e-65
Identities = 142/328 (43%), Positives = 179/328 (54%), Gaps = 32/328 (9%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PYP+EYVD SK CAHCAFFMGLQRKQG +QEGQ
Sbjct: 388 KGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDNSKPCAHCAFFMGLQRKQGEIIQEGQ 447
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFRHS+NMYM+WKPGME+YVSHVRR+QIPS+V P+G+RRPR + + QQ
Sbjct: 448 QFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRPRHPRVSSQQ-P 506
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDE-DIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
R LKRKR DE ++ + ++ S+SP P+
Sbjct: 507 SDKPSYEDGGASRVGSGERGLKRKRDPDEANVKNDMPDKRCSISPQRRDSISPEIISHKF 566
Query: 539 XXXXXXXIKVDGSP----DTTLFEPERIPIG-------------NLGRSFEEAGVSCCAN 667
+G+ D +F P+ + G ++G S E+ G A
Sbjct: 567 GGTSACLAFSEGNEMCEVDKKMFCPDDVEGGCTSNSSVITSLSSDIG-SCEDIGNESVAG 625
Query: 668 AESGEGGRFKESVQTNMRKTVS-------------EVTFLESERVLESDLAKELEPNASS 808
+ G G SV+ + S E + V + L +E EPNA+
Sbjct: 626 SSKGNNGSADGSVEGSNNVVSSQSDSGDADSLCHLENVCRDGSGVFQDGLREEFEPNAAV 685
Query: 809 IGVVLKGRGGVGSESVQKPVI-RLSLTS 889
+ GV +E+VQKPV+ RLSLTS
Sbjct: 686 V-------DGVDAEAVQKPVLSRLSLTS 706
>gb|KHG18561.1| Poly (A) polymerase [Gossypium arboreum]
gb|KHG22416.1| Poly (A) polymerase [Gossypium arboreum]
Length = 695
Score = 226 bits (575), Expect = 4e-65
Identities = 141/313 (45%), Positives = 178/313 (56%), Gaps = 17/313 (5%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PYP +YVD SK CAHCAFFMGLQRK G VQEGQ
Sbjct: 393 KGWVESRLRQLTLMIERDTYGKLQCHPYPQDYVDASKPCAHCAFFMGLQRKHGEIVQEGQ 452
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRG+VDEFRHS+NMYM+WKPGME+YVSHVRR+Q+P++V P+G +R R + TP+Q
Sbjct: 453 QFDIRGSVDEFRHSINMYMFWKPGMEIYVSHVRRKQLPAYVYPDGCKRSRNLHLTPEQ-P 511
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
+ LKRK+ D ED + +L++ SPD + P+
Sbjct: 512 SYNMSRNNGVAYQAESGEKCLKRKKDPDGEDSEQSRLDK--RRSPDRNQSVSPE------ 563
Query: 539 XXXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCAN--------AESGEGGRF 694
G + L E R + S +G+S C++ A S EG
Sbjct: 564 IISCKLGSTCTGCSTSDLDEMNR--FAEVNTSSNSSGISSCSHEDIGNESTAGSSEGSNV 621
Query: 695 -------KESVQTNMRKTVSEVTFLESERVLESDLAKELEPNASSIGVVLKGRGG-VGSE 850
+S ++ K+ E + +V + L K+LEP + +GVVLK G V SE
Sbjct: 622 GDDNPSSSQSDSSDDLKSSVEDDHADQNKVFQDGLLKDLEPK-TVVGVVLKSMNGVVDSE 680
Query: 851 SVQKPVIRLSLTS 889
SVQ PVIRLSL S
Sbjct: 681 SVQNPVIRLSLAS 693
>ref|XP_017609533.1| PREDICTED: nuclear poly(A) polymerase 4-like [Gossypium arboreum]
Length = 663
Score = 225 bits (573), Expect = 5e-65
Identities = 141/313 (45%), Positives = 177/313 (56%), Gaps = 17/313 (5%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PYP +YVD SK CAHCAFFMGLQRK G VQEGQ
Sbjct: 361 KGWVESRLRQLTLMIERDTYGKLQCHPYPQDYVDASKPCAHCAFFMGLQRKHGEIVQEGQ 420
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRG+VDEFRHS+NMYM+WKPGME+YVSHVRR+Q+P++V P+G R R + TP+Q
Sbjct: 421 QFDIRGSVDEFRHSINMYMFWKPGMEIYVSHVRRKQLPAYVYPDGCERSRNLHLTPEQ-P 479
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
+ LKRK+ D ED + +L++ SPD + P+
Sbjct: 480 SYNMSRNNGVAYQAESGEKCLKRKKDPDGEDSEQSRLDK--RRSPDRNQSVSPE------ 531
Query: 539 XXXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCAN--------AESGEGGRF 694
G + L E R + S +G+S C++ A S EG
Sbjct: 532 IISCKLGSTCTGCSTSDLDEMNR--FAEVNTSSNSSGISSCSHEDIGNESTAGSSEGSNV 589
Query: 695 -------KESVQTNMRKTVSEVTFLESERVLESDLAKELEPNASSIGVVLKGRGG-VGSE 850
+S ++ K+ E + +V + L K+LEP + +GVVLK G V SE
Sbjct: 590 GDDNPSSSQSDSSDDLKSSVEDDHADQNKVFQDGLLKDLEPK-TVVGVVLKSMNGVVDSE 648
Query: 851 SVQKPVIRLSLTS 889
SVQ PVIRLSL S
Sbjct: 649 SVQNPVIRLSLAS 661
>ref|XP_016668918.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Gossypium
hirsutum]
Length = 695
Score = 225 bits (573), Expect = 8e-65
Identities = 139/313 (44%), Positives = 178/313 (56%), Gaps = 17/313 (5%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PYP +YVD SK CAHCAFFMGLQRK G VQEGQ
Sbjct: 393 KGWVESRLRQLTLMIERDTYGKLQCHPYPQDYVDASKPCAHCAFFMGLQRKHGEIVQEGQ 452
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRG++DEFRHS+NMYM+WKPGME+YVSHVRR+Q+P++V P+G +R R + TP+Q
Sbjct: 453 QFDIRGSIDEFRHSINMYMFWKPGMEIYVSHVRRKQLPAYVYPDGCKRSRNLHLTPEQ-P 511
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
+ LKRK+ D ED + +L++ SPD + P+
Sbjct: 512 SYNMSRNNGVAYQAESGEKCLKRKKDPDGEDSEQSRLDK--RRSPDRNQSVSPE------ 563
Query: 539 XXXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCANAESG--------EGGRF 694
G + L E R + S +G+S C++ + G EG
Sbjct: 564 IISCKLGSTCTGCSTSDLDEMNR--FAEVNTSSNSSGISSCSHEDIGNESTAGGSEGSNV 621
Query: 695 -------KESVQTNMRKTVSEVTFLESERVLESDLAKELEPNASSIGVVLKGRGG-VGSE 850
+S ++ K+ E + +V + L K+LEP + +GVVLK G V SE
Sbjct: 622 GDDNPSSSQSDSSDDLKSSVEDDHADQNKVFQDGLLKDLEPK-TVVGVVLKSMNGVVDSE 680
Query: 851 SVQKPVIRLSLTS 889
SVQ PVIRLSL S
Sbjct: 681 SVQNPVIRLSLAS 693
>gb|PKA65324.1| poly(A) polymerase [Apostasia shenzhenica]
Length = 664
Score = 224 bits (571), Expect = 9e-65
Identities = 111/173 (64%), Positives = 131/173 (75%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTLKIERDT GMLQC PYPNEY+D S++CAH AFFMGLQRKQGV+VQEGQ
Sbjct: 223 KGWVESRLRQLTLKIERDTSGMLQCHPYPNEYIDNSRRCAHGAFFMGLQRKQGVQVQEGQ 282
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEF+HSV+MYM+WKPGM++ VSHVRR+QIPSFV PEGFRR RP KP Q
Sbjct: 283 QFDIRGTVDEFKHSVSMYMFWKPGMDINVSHVRRKQIPSFVFPEGFRRFRPSKPMAHQ-- 340
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDEDIGKEKLERLLSVSPDHAKLSLPD 520
R+LKRKR+ ++D + E+L VSP++ K+S P+
Sbjct: 341 -----NLEKEESDGGSSERRLKRKRNVEDDDMRLNAEKLTFVSPNNPKISSPE 388
>gb|PPR98139.1| hypothetical protein GOBAR_AA22530 [Gossypium barbadense]
Length = 707
Score = 224 bits (572), Expect = 1e-64
Identities = 139/313 (44%), Positives = 178/313 (56%), Gaps = 17/313 (5%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G +QC PYP +YVD SK CAHCAFFMGLQRK G VQEGQ
Sbjct: 405 KGWVESRLRQLTLMIERDTYGKMQCHPYPQDYVDASKPCAHCAFFMGLQRKHGEIVQEGQ 464
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRG++DEFRHS+NMYM+WKPGME+YVSHVRR+Q+P++V P+G +R R + TP+Q
Sbjct: 465 QFDIRGSIDEFRHSINMYMFWKPGMEIYVSHVRRKQLPAYVYPDGCKRSRNLHLTPEQ-P 523
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
+ LKRK+ D ED + +L++ SPD + P+
Sbjct: 524 SYNMSRNNGVAYQAESGEKCLKRKKDPDGEDSEQSRLDK--RRSPDRNQSVSPE------ 575
Query: 539 XXXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCAN--------AESGEGGRF 694
G + L E R + S +G+S C++ A S EG
Sbjct: 576 IISCKLGSTCTGCSTSDLDEMNR--FAEVNTSSNSSGISSCSHEDIGNESTAGSSEGSNV 633
Query: 695 -------KESVQTNMRKTVSEVTFLESERVLESDLAKELEPNASSIGVVLKGRGG-VGSE 850
+S ++ K+ E + +V + L K+LEP + +GVVLK G V SE
Sbjct: 634 GDDNPSSSQSDSSDDLKSSVEDDHADQNKVFQDGLLKDLEPK-TVVGVVLKSMNGVVDSE 692
Query: 851 SVQKPVIRLSLTS 889
SVQ PVIRLSL S
Sbjct: 693 SVQNPVIRLSLAS 705
>ref|XP_022715040.1| nuclear poly(A) polymerase 4-like isoform X2 [Durio zibethinus]
Length = 695
Score = 223 bits (567), Expect = 6e-64
Identities = 142/319 (44%), Positives = 180/319 (56%), Gaps = 23/319 (7%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PYP+EYVD SK CAHCAFFMGLQRK+G ++QEGQ
Sbjct: 393 KGWVESRLRQLTLMIERDTYGKLQCHPYPHEYVDASKPCAHCAFFMGLQRKEGEKIQEGQ 452
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRG+VDEFR S+NMYM+WKPGME+YVSHVRR+Q+P++V P G++ P ++ TP Q
Sbjct: 453 QFDIRGSVDEFRLSINMYMFWKPGMEIYVSHVRRKQLPAYVFPNGYKHPWNLRLTPCQQ- 511
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLE------RLLSVSPDHAKLSLPD 520
+ LKRK S+ E+ + +LE R SVSP+ L
Sbjct: 512 SDKLLHDNGVACQTESGAKCLKRKTDSNGENSEESRLEKRQSPTRSESVSPEIISCKLSS 571
Query: 521 PXXXXXXXXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCANAESGE-----G 685
G + L E + GN S+ + +S C+ + G
Sbjct: 572 TS--------------SGCSTSDLDEMNGLTEGN--ASYNSSNISSCSREDIGNESTAGS 615
Query: 686 GRFKESVQTNMRKTVSEV-----TFLESE-----RVLESDLAKELEPNASSIGVVLKGRG 835
V N + S++ + LE E RV + L EL+PN ++IGVV K
Sbjct: 616 SEVSNGVDDNPASSQSDLCDDSKSSLEDEHADQNRVFQDRLLHELKPN-TAIGVVRKSMN 674
Query: 836 G-VGSESVQKPVIRLSLTS 889
G V SE+VQ PVIRLSLTS
Sbjct: 675 GVVDSETVQNPVIRLSLTS 693
>ref|XP_010267125.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X4 [Nelumbo
nucifera]
ref|XP_010267126.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X4 [Nelumbo
nucifera]
Length = 694
Score = 222 bits (566), Expect = 8e-64
Identities = 110/173 (63%), Positives = 127/173 (73%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTLKIERDT GMLQC PYPNEYVDTSKQC+HCAFFMGLQRK+GV+VQEGQ
Sbjct: 304 KGWVESRLRQLTLKIERDTYGMLQCHPYPNEYVDTSKQCSHCAFFMGLQRKEGVKVQEGQ 363
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRGTVDEFRHS+NMYM+WKPGME+YVSHVRR+QIPS+V P+G+RRPRP K Q
Sbjct: 364 QFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRPRPSKLLSQSAE 423
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSDEDIGKEKLERLLSVSPDHAKLSLPD 520
+LKRK+ D ++ K E+ S+SP P+
Sbjct: 424 KSSCDDGSRTGSAEG----RLKRKK--DPEVVDVKPEKRASISPQRQNSLSPE 470
>gb|EOY26946.1| Nucleic acid binding protein, putative isoform 3 [Theobroma cacao]
Length = 697
Score = 222 bits (566), Expect = 9e-64
Identities = 142/322 (44%), Positives = 178/322 (55%), Gaps = 26/322 (8%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IER T G LQC PYP+EYVD SK CA CAFFMGLQRKQG VQEGQ
Sbjct: 393 KGWVESRLRQLTLMIERVTYGKLQCHPYPHEYVDASKPCACCAFFMGLQRKQGEIVQEGQ 452
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRG+VDEFRHSV+MYMYWKPGME++VSH+RR+Q+P++VLP+G++ PR + TP
Sbjct: 453 QFDIRGSVDEFRHSVSMYMYWKPGMEIHVSHIRRKQLPAYVLPDGYKHPRNPRVTPHHQ- 511
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLERLL------SVSPDHAKLSLPD 520
+ LKRK+ + E+ K E+ L SVSP+ L
Sbjct: 512 -SDKLSHNNHIACTESGGKCLKRKKDPEGENSEHSKPEKRLNLDGSESVSPEIISCELSR 570
Query: 521 PXXXXXXXXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCANAESG------- 679
G + L E + GN +F + +S C+N + G
Sbjct: 571 --------------MSSGCSTSDLDEMNGVAEGNASSNF--STISSCSNEDIGNESSEGS 614
Query: 680 --------EGGRFKESVQTNM----RKTVSEVTFLESERVLESDLAKELEPNASSIGVVL 823
EG S +++ K+ E + RV E L KELEPNA ++GVVL
Sbjct: 615 NGGDNGSIEGSTIPASSRSDSCDADSKSSLEDEHADHNRVFEDGLQKELEPNA-AVGVVL 673
Query: 824 KGRGGVGSESVQKPVIRLSLTS 889
K SE+VQ VIRL+LTS
Sbjct: 674 KSMNEADSETVQNTVIRLNLTS 695
>ref|XP_016672070.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Gossypium
hirsutum]
Length = 663
Score = 221 bits (564), Expect = 1e-63
Identities = 140/313 (44%), Positives = 178/313 (56%), Gaps = 17/313 (5%)
Frame = +2
Query: 2 KGWVESRLRTLTLKIERDTCGMLQCRPYPNEYVDTSKQCAHCAFFMGLQRKQGVRVQEGQ 181
KGWVESRLR LTL IERDT G LQC PY +YVD SK CAHCAFFMGLQRK G VQEGQ
Sbjct: 361 KGWVESRLRQLTLMIERDTYGKLQCHPYAQDYVDASKPCAHCAFFMGLQRKHGEIVQEGQ 420
Query: 182 QFDIRGTVDEFRHSVNMYMYWKPGMELYVSHVRRRQIPSFVLPEGFRRPRPVKPTPQQMX 361
QFDIRG+VDEFRHS++MYM+WKPGME+YVSHVRR+Q+P++V P+G +R R + TPQQ
Sbjct: 421 QFDIRGSVDEFRHSISMYMFWKPGMEIYVSHVRRKQLPAYVYPDGCKRSRNLHLTPQQ-P 479
Query: 362 XXXXXXXXXXXXXXXXXXRQLKRKRSSD-EDIGKEKLERLLSVSPDHAKLSLPDPXXXXX 538
+ LKRK+ D E+ + +L++ SPD + P+
Sbjct: 480 SYKISRNNGVAYQAESGEKCLKRKKDPDGENSEQSRLDK--RRSPDRNQSVSPE------ 531
Query: 539 XXXXXXXIKVDGSPDTTLFEPERIPIGNLGRSFEEAGVSCCAN--------AESGEGGRF 694
G + L E R+ N S +G+S C++ A S EG
Sbjct: 532 IVSRKLGSACTGCSTSDLDEMNRLAEAN--TSSNSSGISSCSHEDIGNESTAGSSEGSNV 589
Query: 695 -------KESVQTNMRKTVSEVTFLESERVLESDLAKELEPNASSIGVVLKGRGG-VGSE 850
+S ++ K+ E + +V + L K+LEP + +GVVLK G V SE
Sbjct: 590 GDNNPSSSQSDSSDELKSSVEDEHADQNKVFQDGLPKDLEPK-TVVGVVLKSMNGVVDSE 648
Query: 851 SVQKPVIRLSLTS 889
SVQ PVIRLSL S
Sbjct: 649 SVQNPVIRLSLAS 661