BLASTX nr result

ID: Ophiopogon27_contig00009911 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00009911
         (514 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020266597.1| mediator of RNA polymerase II transcription ...    54   3e-06

>ref|XP_020266597.1| mediator of RNA polymerase II transcription subunit 22b-like
           [Asparagus officinalis]
          Length = 131

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = +2

Query: 2   LLERIGEQASASLKELETHYYSSVMRMGQSEE 97
           +LERIGEQA+ASLKELE+HYYSSVMR  Q+EE
Sbjct: 100 MLERIGEQAAASLKELESHYYSSVMRTVQNEE 131