BLASTX nr result

ID: Ophiopogon27_contig00009748 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00009748
         (593 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009411286.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6...    56   9e-06
ref|XP_009411285.1| PREDICTED: uncharacterized protein LOC103993...    56   9e-06

>ref|XP_009411286.1| PREDICTED: E3 ubiquitin-protein ligase RBBP6 isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 817

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 35/81 (43%), Positives = 46/81 (56%)
 Frame = +3

Query: 138 RQSPGLCPRXXPLSKRWSSDHDXXXXXXXXXXXXXXXXQPCKSDRKQKGSVFSRISFPDS 317
           R SP   PR  P  ++ + DHD                +  K++RKQKGSVFSRISFPD 
Sbjct: 646 RHSP---PR--PRKRKAAEDHDEAPSDAAA--------EAAKAERKQKGSVFSRISFPDP 692

Query: 318 EKEAKKRKTSSSSDTAPANGV 380
            + A K++ SSSS+ AP NG+
Sbjct: 693 GEGASKKRKSSSSELAPRNGL 713


>ref|XP_009411285.1| PREDICTED: uncharacterized protein LOC103993074 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 849

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 35/81 (43%), Positives = 46/81 (56%)
 Frame = +3

Query: 138 RQSPGLCPRXXPLSKRWSSDHDXXXXXXXXXXXXXXXXQPCKSDRKQKGSVFSRISFPDS 317
           R SP   PR  P  ++ + DHD                +  K++RKQKGSVFSRISFPD 
Sbjct: 678 RHSP---PR--PRKRKAAEDHDEAPSDAAA--------EAAKAERKQKGSVFSRISFPDP 724

Query: 318 EKEAKKRKTSSSSDTAPANGV 380
            + A K++ SSSS+ AP NG+
Sbjct: 725 GEGASKKRKSSSSELAPRNGL 745


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