BLASTX nr result

ID: Ophiopogon27_contig00009390 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00009390
         (427 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588284.1| hypothetical protein ZeamMp020 (mitochondrion) ...   159   3e-48
dbj|GAU48484.1| hypothetical protein TSUD_291690 [Trifolium subt...    77   5e-15
gb|PNX82805.1| hypothetical protein L195_g038840 [Trifolium prat...    73   5e-13

>ref|YP_588284.1| hypothetical protein ZeamMp020 (mitochondrion) [Zea mays subsp.
           mays]
 ref|YP_588308.1| hypothetical protein ZeamMp046 (mitochondrion) [Zea mays subsp.
           mays]
 gb|AAR91182.1| hypothetical protein (mitochondrion) [Zea mays]
 gb|AAR91183.1| hypothetical protein (mitochondrion) [Zea mays]
          Length = 99

 Score =  159 bits (403), Expect = 3e-48
 Identities = 77/95 (81%), Positives = 79/95 (83%)
 Frame = +2

Query: 143 GIRSKLSFLFDHFDRGGWIKWTKQTHIFQVPPASKKRWVPFSSRQRKNHLENAPHPFVEP 322
           G +  L  LF HF RGGWIKW KQTHIFQ      KRWVPFSSRQRKNHLENAP+PFV P
Sbjct: 7   GNKKHLKCLFYHFYRGGWIKWAKQTHIFQ-----SKRWVPFSSRQRKNHLENAPNPFVGP 61

Query: 323 CIVSDPNLPGASPPSEASEVGEPYDGQLSPAVRRG 427
           CIVSDPNLPGASPP EASEVGEPYDGQLSPAVRRG
Sbjct: 62  CIVSDPNLPGASPPLEASEVGEPYDGQLSPAVRRG 96


>dbj|GAU48484.1| hypothetical protein TSUD_291690 [Trifolium subterraneum]
          Length = 175

 Score = 77.4 bits (189), Expect = 5e-15
 Identities = 52/91 (57%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
 Frame = -3

Query: 362 GGSLRAGSDHLQYTALRRGEERFQDDS---FF----VETKKEPISSY*LAGPGKCESVLS 204
           G SLRAGSD+   T L  G+  +  +S   FF     +TKKEPI S      GKCESVLS
Sbjct: 2   GDSLRAGSDY--NTRLYEGKGWWVGNSILFFFRDEKCKTKKEPIFS-----TGKCESVLS 54

Query: 203 TLSILLYQNDQKGRKACF*FPCLIFSISAPL 111
           T SI LYQND+KGR+ACF F C I SISAPL
Sbjct: 55  TFSIPLYQNDKKGRRACFLFSCSISSISAPL 85


>gb|PNX82805.1| hypothetical protein L195_g038840 [Trifolium pratense]
          Length = 211

 Score = 73.2 bits (178), Expect = 5e-13
 Identities = 48/79 (60%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
 Frame = -1

Query: 331 YNTRLYE----GVRSVFKMILSL--SRRKRNPSLLTSWRDLENVSLFCPLYPSSSIKMIK 170
           YNTRLYE     V +VF ++L    +RRKRNPS       L N SLFCPL PS SIKMIK
Sbjct: 11  YNTRLYEVKGWWVGNVFNILLFPINARRKRNPSFR-----LGNASLFCPLSPSLSIKMIK 65

Query: 169 KEGKLASDSRV*SFQSLPR 113
           KEG+LAS SRV S  SLPR
Sbjct: 66  KEGELASYSRVRSLPSLPR 84


Top