BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00008502
         (2379 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asp...   798   0.0  
gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus...   547   0.0  
ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V sub...   604   0.0  
gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial ...   602   0.0  
ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   598   0.0  
ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V sub...   586   0.0  
ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V sub...   586   0.0  
ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ana...   551   e-172
gb|PKU59438.1| DNA-directed RNA polymerase E subunit 1 [Dendrobi...   519   e-165
gb|AQK60570.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     512   e-163
gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial ...   512   e-160
ref|XP_020688039.1| DNA-directed RNA polymerase V subunit 1 [Den...   519   e-160
gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     512   e-160
ref|XP_020576180.1| DNA-directed RNA polymerase V subunit 1 [Pha...   518   e-160
ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V sub...   518   e-159
gb|AQK60587.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     512   e-159
gb|AQK60574.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     512   e-158
ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Set...   516   e-158
gb|AQK60567.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]     512   e-158
gb|AQK60573.1| DNA-directed RNA polymerase V subunit 1 [Zea mays...   512   e-158

>ref|XP_020269146.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
 ref|XP_020269147.1| DNA-directed RNA polymerase V subunit 1 [Asparagus officinalis]
          Length = 1945

 Score =  798 bits (2060), Expect(2) = 0.0
 Identities = 384/446 (86%), Positives = 413/446 (92%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS+STNSSWE MKEILLCKA YQN  IDRR+VLYLN+CCCGKKFCREN+A
Sbjct: 846  SNPAYKAVLDSSSSTNSSWELMKEILLCKAAYQNAFIDRRIVLYLNDCCCGKKFCRENSA 905

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            LAVQNCLRSV LKHCA+D SIEYQKQI LPNS+ T SGLVGH+HLD  RLKILNQ TDG+
Sbjct: 906  LAVQNCLRSVTLKHCAIDFSIEYQKQICLPNSA-TVSGLVGHLHLDTTRLKILNQNTDGV 964

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDE 1839
            LHKCQEV +GHTRKKGHLSNI RRTFLS+SE C S Q ND NLSEFPCLQFSY AG VDE
Sbjct: 965  LHKCQEVIRGHTRKKGHLSNILRRTFLSASEDCSSLQSNDANLSEFPCLQFSYCAGGVDE 1024

Query: 1838 TLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVV 1659
            TL+ GMHIMINTICPILLDTI+KGDPR+D VNIIW+GPD+TSWVS+P   ++GELALEVV
Sbjct: 1025 TLQQGMHIMINTICPILLDTIIKGDPRIDTVNIIWSGPDSTSWVSNPDNPVRGELALEVV 1084

Query: 1658 VQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKC 1479
            VQKVAA+K GDAWRIVLDACLPV+HLI+TTRSIPYGIQQIKE+FGISCAFDQSVQRLSK 
Sbjct: 1085 VQKVAAKKNGDAWRIVLDACLPVIHLINTTRSIPYGIQQIKEIFGISCAFDQSVQRLSKS 1144

Query: 1478 IRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFE 1299
            IRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFK+LFRSLKVQVPFTEATLLTPMKCFE
Sbjct: 1145 IRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKSLFRSLKVQVPFTEATLLTPMKCFE 1204

Query: 1298 RAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVR 1119
            +AAEKCHTD+LGS+VSSVSWGKHVA+GTGTHFEVIWG K QV CNEDVGKDVYDLLAWVR
Sbjct: 1205 KAAEKCHTDSLGSIVSSVSWGKHVAVGTGTHFEVIWGHKNQVACNEDVGKDVYDLLAWVR 1264

Query: 1118 EPQEKDLPGACLGSDIEDFLDDFQND 1041
            EPQE+DLPGACLGSDI+DFLDDFQ D
Sbjct: 1265 EPQERDLPGACLGSDIDDFLDDFQGD 1290



 Score =  221 bits (562), Expect(2) = 0.0
 Identities = 138/347 (39%), Positives = 171/347 (49%), Gaps = 39/347 (11%)
 Frame = -3

Query: 937  SDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASP 758
            +D+WQ WG   K S      S W+    T  ESD W  W +KAKPSAD+GNKSSWE  SP
Sbjct: 1318 NDSWQEWGRTGKPS------SSWDNAK-TVTESDTWSAWDNKAKPSADTGNKSSWE-FSP 1369

Query: 757  AVIESN--------------------SQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQG 638
             V E+                     S W  K KPST+  NK+ W+ +SP V  +D WQG
Sbjct: 1370 KVAEAENRNKTSWDNGKNTVTKSDDWSSWENKAKPSTNTSNKTSWQ-VSPKVVGADIWQG 1428

Query: 637  RGNRDQLAPGSSEMPTTRSAVWSSWDTAKVRHSNQSTQSRKEFNGF---------SSFDN 485
            R +RDQ AP SSE+PT++S  WSSWD AK  H NQS Q  K   G+         SS   
Sbjct: 1429 RESRDQHAPDSSEIPTSKSDDWSSWDNAKPHHPNQSAQLNKGVGGWDVKKSRAESSSGWQ 1488

Query: 484  DDVQKSP-------IWKPNKPEVVSSSGWNEPVTRVNEPDSGWKERKGNDSSWTAKKPEV 326
               QK P        W P KPE  SS  W E        +S WK+ K + SSWTAKKP++
Sbjct: 1489 PSSQKKPWAAEANESWTPRKPETQSSLPWEE------NSNSQWKKSKASGSSWTAKKPQL 1542

Query: 325  ESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTARKSDVESPSGWQENL-EQKAWSAK 149
            E S G  +N E  AW A S    W + + N+SSW  +K + +S S W+EN  E  AW   
Sbjct: 1543 EISLGQHENIENNAWQASSEKKIWTDKS-NESSWRPKKPEAQSSSPWKENTSETNAWQGS 1601

Query: 148  LPGIKECQ-GNKSSWTARKP-XXXXXXXXXXXXENKAWSAKSPDSGW 14
                +E    N++SWT RKP             E+ AW   S    W
Sbjct: 1602 SEKKQETDTANEASWTPRKPETQSSSPWKKDTSEDNAWQTSSEKKPW 1648



 Score =  153 bits (386), Expect = 3e-34
 Identities = 115/383 (30%), Positives = 164/383 (42%), Gaps = 56/383 (14%)
 Frame = -3

Query: 991  ADNGNKSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSK 812
            A+N NK++W+N   TV +SD+W +W +K K S +  NK+ W+ VSP  V +D WQ   S+
Sbjct: 1374 AENRNKTSWDNGKNTVTKSDDWSSWENKAKPSTNTSNKTSWQ-VSPKVVGADIWQGRESR 1432

Query: 811  AK--------PSADSGNKSSWEKASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAE 656
             +        P++ S + SSW+ A P     ++Q          N    GW+        
Sbjct: 1433 DQHAPDSSEIPTSKSDDWSSWDNAKPHHPNQSAQL---------NKGVGGWDVKKSRAES 1483

Query: 655  SDSWQGRGNRDQLAPGSSE-----MPTTRSAV-W-----SSWDTAKVRHSNQSTQSRKEF 509
            S  WQ    +   A  ++E      P T+S++ W     S W  +K   S+ + +  +  
Sbjct: 1484 SSGWQPSSQKKPWAAEANESWTPRKPETQSSLPWEENSNSQWKKSKASGSSWTAKKPQLE 1543

Query: 508  NGFSSFDN---------------DDVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPDSGWK 374
                  +N                D      W+P KPE  SSS W E  +  N    G  
Sbjct: 1544 ISLGQHENIENNAWQASSEKKIWTDKSNESSWRPKKPEAQSSSPWKENTSETN-AWQGSS 1602

Query: 373  ERK-----GNDSSWTAKKPEVESSSGW-ADNSEKKAWPAKSPDSGWKENTGNKSSWTARK 212
            E+K      N++SWT +KPE +SSS W  D SE  AW   S    W + T N+SSWT RK
Sbjct: 1603 EKKQETDTANEASWTPRKPETQSSSPWKKDTSEDNAWQTSSEKKPWTDKT-NESSWTPRK 1661

Query: 211  SDVESPSGWQEN-LEQKAWSAK---------------LPGIKECQGNKSSWTARKPXXXX 80
             D ++ S W EN  E+K WS                  PG  E  G ++ WTA+ P    
Sbjct: 1662 PDTQTSSPWNENSSEKKGWSTNGVDSVLGGNESEVKASPGWNE--GGENPWTAKTP---- 1715

Query: 79   XXXXXXXXENKAWSAKSPDSGWK 11
                     N AW  +    GWK
Sbjct: 1716 ----EVETPNVAWGGRG-KQGWK 1733



 Score = 82.8 bits (203), Expect = 3e-12
 Identities = 94/362 (25%), Positives = 127/362 (35%), Gaps = 100/362 (27%)
 Frame = -3

Query: 997  PCADNGNKSNWENVSPTVVESDNWQAWGSKDKTSADNG--------NKSRWEKVSP---- 854
            P  +  NK++W+ VSP VV +D WQ   S+D+ + D+         + S W+   P    
Sbjct: 1404 PSTNTSNKTSWQ-VSPKVVGADIWQGRESRDQHAPDSSEIPTSKSDDWSSWDNAKPHHPN 1462

Query: 853  -----------------TAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIES------ 743
                              A  S  WQP  S+ KP A   N+S W    P    S      
Sbjct: 1463 QSAQLNKGVGGWDVKKSRAESSSGWQP-SSQKKPWAAEANES-WTPRKPETQSSLPWEEN 1520

Query: 742  -NSQWGRKE---------KPS-------------------------TDNGNKSGWEKLSP 668
             NSQW + +         KP                          TD  N+S W    P
Sbjct: 1521 SNSQWKKSKASGSSWTAKKPQLEISLGQHENIENNAWQASSEKKIWTDKSNESSWRPKKP 1580

Query: 667  MVAESDSWQGRGNRDQLAPGSSEMPT-TRSAVWSSWDTAKVRHSNQSTQSRKEFNGFSSF 491
                S  W+   +      GSSE    T +A  +SW   K       TQS   +   +S 
Sbjct: 1581 EAQSSSPWKENTSETNAWQGSSEKKQETDTANEASWTPRK-----PETQSSSPWKKDTSE 1635

Query: 490  DN-----------DDVQKSPIWKPNKPEVVSSSGWNEPVTR-----VNEPDS-------- 383
            DN            D      W P KP+  +SS WNE  +       N  DS        
Sbjct: 1636 DNAWQTSSEKKPWTDKTNESSWTPRKPDTQTSSPWNENSSEKKGWSTNGVDSVLGGNESE 1695

Query: 382  -----GWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTA 218
                 GW E  G ++ WTAK PEVE+ +         AW  +    GWK      SS++ 
Sbjct: 1696 VKASPGWNE--GGENPWTAKTPEVETPN--------VAWGGRG-KQGWKSQGRGSSSFSD 1744

Query: 217  RK 212
            R+
Sbjct: 1745 RR 1746


>gb|ONK65887.1| uncharacterized protein A4U43_C06F2000 [Asparagus officinalis]
          Length = 1833

 Score =  547 bits (1409), Expect(2) = 0.0
 Identities = 261/300 (87%), Positives = 280/300 (93%)
 Frame = -2

Query: 1940 LSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDETLEHGMHIMINTICPILLDTIVKGDP 1761
            L  SE C S Q ND NLSEFPCLQFSY AG VDETL+ GMHIMINTICPILLDTI+KGDP
Sbjct: 879  LRGSEDCSSLQSNDANLSEFPCLQFSYCAGGVDETLQQGMHIMINTICPILLDTIIKGDP 938

Query: 1760 RVDAVNIIWTGPDATSWVSSPGRTLKGELALEVVVQKVAARKKGDAWRIVLDACLPVMHL 1581
            R+D VNIIW+GPD+TSWVS+P   ++GELALEVVVQKVAA+K GDAWRIVLDACLPV+HL
Sbjct: 939  RIDTVNIIWSGPDSTSWVSNPDNPVRGELALEVVVQKVAAKKNGDAWRIVLDACLPVIHL 998

Query: 1580 IDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKCIRMVSKGVIKEHLVLVGNNMTCTGNL 1401
            I+TTRSIPYGIQQIKE+FGISCAFDQSVQRLSK IRMVSKGVIKEHLVLVGNNMTCTGNL
Sbjct: 999  INTTRSIPYGIQQIKEIFGISCAFDQSVQRLSKSIRMVSKGVIKEHLVLVGNNMTCTGNL 1058

Query: 1400 IGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFERAAEKCHTDALGSVVSSVSWGKHVAL 1221
            IGFNTSGFK+LFRSLKVQVPFTEATLLTPMKCFE+AAEKCHTD+LGS+VSSVSWGKHVA+
Sbjct: 1059 IGFNTSGFKSLFRSLKVQVPFTEATLLTPMKCFEKAAEKCHTDSLGSIVSSVSWGKHVAV 1118

Query: 1220 GTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVREPQEKDLPGACLGSDIEDFLDDFQND 1041
            GTGTHFEVIWG K QV CNEDVGKDVYDLLAWVREPQE+DLPGACLGSDI+DFLDDFQ D
Sbjct: 1119 GTGTHFEVIWGHKNQVACNEDVGKDVYDLLAWVREPQERDLPGACLGSDIDDFLDDFQGD 1178



 Score =  221 bits (562), Expect(2) = 0.0
 Identities = 138/347 (39%), Positives = 171/347 (49%), Gaps = 39/347 (11%)
 Frame = -3

Query: 937  SDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASP 758
            +D+WQ WG   K S      S W+    T  ESD W  W +KAKPSAD+GNKSSWE  SP
Sbjct: 1206 NDSWQEWGRTGKPS------SSWDNAK-TVTESDTWSAWDNKAKPSADTGNKSSWE-FSP 1257

Query: 757  AVIESN--------------------SQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQG 638
             V E+                     S W  K KPST+  NK+ W+ +SP V  +D WQG
Sbjct: 1258 KVAEAENRNKTSWDNGKNTVTKSDDWSSWENKAKPSTNTSNKTSWQ-VSPKVVGADIWQG 1316

Query: 637  RGNRDQLAPGSSEMPTTRSAVWSSWDTAKVRHSNQSTQSRKEFNGF---------SSFDN 485
            R +RDQ AP SSE+PT++S  WSSWD AK  H NQS Q  K   G+         SS   
Sbjct: 1317 RESRDQHAPDSSEIPTSKSDDWSSWDNAKPHHPNQSAQLNKGVGGWDVKKSRAESSSGWQ 1376

Query: 484  DDVQKSP-------IWKPNKPEVVSSSGWNEPVTRVNEPDSGWKERKGNDSSWTAKKPEV 326
               QK P        W P KPE  SS  W E        +S WK+ K + SSWTAKKP++
Sbjct: 1377 PSSQKKPWAAEANESWTPRKPETQSSLPWEE------NSNSQWKKSKASGSSWTAKKPQL 1430

Query: 325  ESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTARKSDVESPSGWQENL-EQKAWSAK 149
            E S G  +N E  AW A S    W + + N+SSW  +K + +S S W+EN  E  AW   
Sbjct: 1431 EISLGQHENIENNAWQASSEKKIWTDKS-NESSWRPKKPEAQSSSPWKENTSETNAWQGS 1489

Query: 148  LPGIKECQ-GNKSSWTARKP-XXXXXXXXXXXXENKAWSAKSPDSGW 14
                +E    N++SWT RKP             E+ AW   S    W
Sbjct: 1490 SEKKQETDTANEASWTPRKPETQSSSPWKKDTSEDNAWQTSSEKKPW 1536



 Score =  153 bits (386), Expect = 3e-34
 Identities = 115/383 (30%), Positives = 164/383 (42%), Gaps = 56/383 (14%)
 Frame = -3

Query: 991  ADNGNKSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGSK 812
            A+N NK++W+N   TV +SD+W +W +K K S +  NK+ W+ VSP  V +D WQ   S+
Sbjct: 1262 AENRNKTSWDNGKNTVTKSDDWSSWENKAKPSTNTSNKTSWQ-VSPKVVGADIWQGRESR 1320

Query: 811  AK--------PSADSGNKSSWEKASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAE 656
             +        P++ S + SSW+ A P     ++Q          N    GW+        
Sbjct: 1321 DQHAPDSSEIPTSKSDDWSSWDNAKPHHPNQSAQL---------NKGVGGWDVKKSRAES 1371

Query: 655  SDSWQGRGNRDQLAPGSSE-----MPTTRSAV-W-----SSWDTAKVRHSNQSTQSRKEF 509
            S  WQ    +   A  ++E      P T+S++ W     S W  +K   S+ + +  +  
Sbjct: 1372 SSGWQPSSQKKPWAAEANESWTPRKPETQSSLPWEENSNSQWKKSKASGSSWTAKKPQLE 1431

Query: 508  NGFSSFDN---------------DDVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPDSGWK 374
                  +N                D      W+P KPE  SSS W E  +  N    G  
Sbjct: 1432 ISLGQHENIENNAWQASSEKKIWTDKSNESSWRPKKPEAQSSSPWKENTSETN-AWQGSS 1490

Query: 373  ERK-----GNDSSWTAKKPEVESSSGW-ADNSEKKAWPAKSPDSGWKENTGNKSSWTARK 212
            E+K      N++SWT +KPE +SSS W  D SE  AW   S    W + T N+SSWT RK
Sbjct: 1491 EKKQETDTANEASWTPRKPETQSSSPWKKDTSEDNAWQTSSEKKPWTDKT-NESSWTPRK 1549

Query: 211  SDVESPSGWQEN-LEQKAWSAK---------------LPGIKECQGNKSSWTARKPXXXX 80
             D ++ S W EN  E+K WS                  PG  E  G ++ WTA+ P    
Sbjct: 1550 PDTQTSSPWNENSSEKKGWSTNGVDSVLGGNESEVKASPGWNE--GGENPWTAKTP---- 1603

Query: 79   XXXXXXXXENKAWSAKSPDSGWK 11
                     N AW  +    GWK
Sbjct: 1604 ----EVETPNVAWGGRG-KQGWK 1621



 Score = 82.8 bits (203), Expect = 3e-12
 Identities = 94/362 (25%), Positives = 127/362 (35%), Gaps = 100/362 (27%)
 Frame = -3

Query: 997  PCADNGNKSNWENVSPTVVESDNWQAWGSKDKTSADNG--------NKSRWEKVSP---- 854
            P  +  NK++W+ VSP VV +D WQ   S+D+ + D+         + S W+   P    
Sbjct: 1292 PSTNTSNKTSWQ-VSPKVVGADIWQGRESRDQHAPDSSEIPTSKSDDWSSWDNAKPHHPN 1350

Query: 853  -----------------TAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIES------ 743
                              A  S  WQP  S+ KP A   N+S W    P    S      
Sbjct: 1351 QSAQLNKGVGGWDVKKSRAESSSGWQP-SSQKKPWAAEANES-WTPRKPETQSSLPWEEN 1408

Query: 742  -NSQWGRKE---------KPS-------------------------TDNGNKSGWEKLSP 668
             NSQW + +         KP                          TD  N+S W    P
Sbjct: 1409 SNSQWKKSKASGSSWTAKKPQLEISLGQHENIENNAWQASSEKKIWTDKSNESSWRPKKP 1468

Query: 667  MVAESDSWQGRGNRDQLAPGSSEMPT-TRSAVWSSWDTAKVRHSNQSTQSRKEFNGFSSF 491
                S  W+   +      GSSE    T +A  +SW   K       TQS   +   +S 
Sbjct: 1469 EAQSSSPWKENTSETNAWQGSSEKKQETDTANEASWTPRK-----PETQSSSPWKKDTSE 1523

Query: 490  DN-----------DDVQKSPIWKPNKPEVVSSSGWNEPVTR-----VNEPDS-------- 383
            DN            D      W P KP+  +SS WNE  +       N  DS        
Sbjct: 1524 DNAWQTSSEKKPWTDKTNESSWTPRKPDTQTSSPWNENSSEKKGWSTNGVDSVLGGNESE 1583

Query: 382  -----GWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTA 218
                 GW E  G ++ WTAK PEVE+ +         AW  +    GWK      SS++ 
Sbjct: 1584 VKASPGWNE--GGENPWTAKTPEVETPN--------VAWGGRG-KQGWKSQGRGSSSFSD 1632

Query: 217  RK 212
            R+
Sbjct: 1633 RR 1634


>ref|XP_010932322.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
 ref|XP_010932323.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
 ref|XP_019708936.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
 ref|XP_019708937.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Elaeis
            guineensis]
          Length = 1708

 Score =  604 bits (1558), Expect = 0.0
 Identities = 295/441 (66%), Positives = 356/441 (80%), Gaps = 3/441 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVL+SS S NSSWE MKEILLCK  ++N + DRRV+LYLN+C CGKKFC+ENAA
Sbjct: 845  SNPAYKAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYLNDCLCGKKFCKENAA 904

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            +AVQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHLD MRLK+LN++ D I
Sbjct: 905  IAVQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEI 964

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD- 1842
            L KCQ+V  G+ +KKG LS+ FRR  LS SECC ++QP+ GNLS FPCLQFSY   +   
Sbjct: 965  LRKCQDVIFGYGKKKGKLSHFFRRIILSLSECCSTRQPDVGNLSPFPCLQFSYRDQSTTP 1024

Query: 1841 --ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELAL 1668
              E+LE  +H+M NTICPILLDTI+KGDPRV   NI+WTGPDATSWV +  +TLKGE+A+
Sbjct: 1025 DCESLEGAIHVMANTICPILLDTIIKGDPRVHEANIVWTGPDATSWVRNSCKTLKGEVAI 1084

Query: 1667 EVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRL 1488
            EVVV+K A R+ GDAWR V+DACLPV+HLI+T RSIPYGIQQ++EL GISCAFDQ+VQRL
Sbjct: 1085 EVVVEKDAVRRNGDAWRTVIDACLPVIHLINTRRSIPYGIQQLQELLGISCAFDQTVQRL 1144

Query: 1487 SKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMK 1308
            S  I  V+KGV+K HL+LV N+MTCTGNLIGFNT+G+KALFRSLKVQVPFTEATL+TPMK
Sbjct: 1145 SASITKVAKGVLKGHLILVANSMTCTGNLIGFNTAGYKALFRSLKVQVPFTEATLITPMK 1204

Query: 1307 CFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLA 1128
            CFERAAEKCHTD+L SVVSS  WGKHVA+GTG+ F+++W  KQQ+  N+++GK  YD L 
Sbjct: 1205 CFERAAEKCHTDSLVSVVSSCLWGKHVAIGTGSPFQILW-NKQQMAENQNIGKGFYDFLE 1263

Query: 1127 WVREPQEKDLPGACLGSDIED 1065
             VR   +++    C   D++D
Sbjct: 1264 LVRTSSQREAGDGC-SLDVDD 1283



 Score = 76.6 bits (187), Expect = 2e-10
 Identities = 68/282 (24%), Positives = 107/282 (37%), Gaps = 29/282 (10%)
 Frame = -3

Query: 919  WGSKDKTSADNGN--KSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIE 746
            +  K   S +NG    S WEK+S +   SD WQ W ++ +P  D    S W+        
Sbjct: 1313 YNCKKDVSMENGKVGNSSWEKISDSVAGSDRWQGWENRNQPEMDMS--SGWQG------- 1363

Query: 745  SNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSS 566
                W   ++P TD  N S               QG GN+      +S+ PTTR++VWSS
Sbjct: 1364 ----WDNGKQPFTDQSNTS---------------QGWGNKKVTDGENSKPPTTRTSVWSS 1404

Query: 565  WDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVV-------------SSS 425
            WD + V+  + ++  + +    +S       KS IW       V             +  
Sbjct: 1405 WDASDVQERSPASSPKSQLGHVAS-----SSKSGIWGSQSSSKVADLRSVDTTSNSSTQD 1459

Query: 424  GWN-------EPVTRVN------EPDSGWKERKGNDSS-WTAKKPEVESSSGWADNSEKK 287
            GWN       +PV   N        D+ W     + S+ W ++  +   + GW      +
Sbjct: 1460 GWNHVKESPAKPVWDTNVTRKSHGADNTWNTSAFSKSNVWDSQSFDKVHNEGWDGGKWNE 1519

Query: 286  AWPAKSPDSGWKENTGNKSSWTARKSDVESPSGWQENLEQKA 161
                   +  WK  + N S+ T R++        Q NL  K+
Sbjct: 1520 NQVPDHKNQSWKSRSWNSSNATDRRT--------QRNLSNKS 1553



 Score = 65.1 bits (157), Expect = 7e-07
 Identities = 64/282 (22%), Positives = 103/282 (36%), Gaps = 42/282 (14%)
 Frame = -3

Query: 988  DNGN--KSNWENVSPTVVESDNWQAWGSKDKTSADNGNKSRWEKVSPTAVESDDWQPWGS 815
            +NG    S+WE +S +V  SD WQ W ++++   D                S  WQ W +
Sbjct: 1322 ENGKVGNSSWEKISDSVAGSDRWQGWENRNQPEMD---------------MSSGWQGWDN 1366

Query: 814  KAKPSADSGNKSSWEKASPAVIESNSQWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGR 635
              +P  D  N S               WG K+    +N          P    +  W   
Sbjct: 1367 GKQPFTDQSNTS-------------QGWGNKKVTDGENS--------KPPTTRTSVWSSW 1405

Query: 634  GNRD--QLAPGSSE-------MPTTRSAVWSSWDTAKVRH-------SNQSTQ------- 524
               D  + +P SS          +++S +W S  ++KV         SN STQ       
Sbjct: 1406 DASDVQERSPASSPKSQLGHVASSSKSGIWGSQSSSKVADLRSVDTTSNSSTQDGWNHVK 1465

Query: 523  ------------SRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTRVNE-PD- 386
                        +RK     ++++     KS +W     + V + GW+      N+ PD 
Sbjct: 1466 ESPAKPVWDTNVTRKSHGADNTWNTSAFSKSNVWDSQSFDKVHNEGWDGGKWNENQVPDH 1525

Query: 385  --SGWKERKGNDSSWTAKKPEVESSSGWADNS-EKKAWPAKS 269
                WK R  N S+ T ++ +   S+  A  S ++K W + S
Sbjct: 1526 KNQSWKSRSWNSSNATDRRTQRNLSNKSAGTSDDRKGWNSNS 1567


>gb|AIO05699.1| DNA-directed RNA polymerase V subunit 1, partial [Cocos nucifera]
          Length = 1673

 Score =  602 bits (1551), Expect = 0.0
 Identities = 295/449 (65%), Positives = 358/449 (79%), Gaps = 3/449 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVL+SS S NSSWE MKEILLCK  ++N + DRRV+LYLN+C CGKKFC+ENAA
Sbjct: 845  SNPAYKAVLESSQSNNSSWELMKEILLCKVMFKNVVTDRRVILYLNDCFCGKKFCKENAA 904

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            +AVQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHLD M LK+LN++ D I
Sbjct: 905  IAVQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMGLKLLNRSPDEI 964

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD- 1842
            L KCQ+V  G+ +KKG LS+ FRR  LS SECC ++QP+ GNLS FPCLQFSY   +   
Sbjct: 965  LRKCQDVIFGYAKKKGKLSHFFRRIILSLSECCCTRQPDVGNLSPFPCLQFSYCDQSATP 1024

Query: 1841 --ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELAL 1668
              E+LE  +H+M NTICPILLDTI+KGDPRV   NI+W GPDATSWV +  +TLKGE+A+
Sbjct: 1025 DCESLEGAIHVMANTICPILLDTIIKGDPRVYDANIVWIGPDATSWVRNSCKTLKGEVAI 1084

Query: 1667 EVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRL 1488
            EVVV+K A R+ GDAWR V+DACLPVMHLI+T RSIPYGIQQ++EL GISCAFDQ+VQRL
Sbjct: 1085 EVVVEKDAVRRNGDAWRTVMDACLPVMHLINTRRSIPYGIQQLQELLGISCAFDQTVQRL 1144

Query: 1487 SKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMK 1308
            S  I  V+KGV+K+HL+LV N+MTCTGNLIGFNT+G+KALFRSLKVQVPFTEATL+TPMK
Sbjct: 1145 SASITKVAKGVLKDHLILVANSMTCTGNLIGFNTAGYKALFRSLKVQVPFTEATLITPMK 1204

Query: 1307 CFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLA 1128
            CFERAAEKCHTD+L SVVSS  WGKHVA+GTG+ F+++W  KQQ+  N+++GK  YD L 
Sbjct: 1205 CFERAAEKCHTDSLASVVSSCLWGKHVAIGTGSPFQILW-NKQQMAENQNIGKGFYDFLE 1263

Query: 1127 WVREPQEKDLPGACLGSDIEDFLDDFQND 1041
             VR   +++    C   D++D   +  N+
Sbjct: 1264 LVRTSSQREAGDGC-SLDVDDLEANENNE 1291



 Score = 79.3 bits (194), Expect = 3e-11
 Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 8/278 (2%)
 Frame = -3

Query: 910  KDKTSADNGN--KSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIESNS 737
            K   S +NG   KS WEK+S +   SD WQ W ++ +P  D    S W+           
Sbjct: 1316 KKDVSMENGKVGKSSWEKISDSVAGSDRWQGWENRNQPEMDVS--SDWQG---------- 1363

Query: 736  QWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSWDT 557
             W   ++P TD  N+S               QG GN       +S +PTTR +VWSSWD 
Sbjct: 1364 -WDNGKQPFTDRSNRS---------------QGWGNEKVTDGENSILPTTRPSVWSSWDA 1407

Query: 556  AKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPDSGW 377
              V+  + ++  + +    +S       KS IW       V+     +  ++ +  D GW
Sbjct: 1408 TDVQERSPASSPKSQLGHVAS-----SSKSGIWGSQNFSKVADLRSVDSTSKSSTQD-GW 1461

Query: 376  KERKGN------DSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTAR 215
               K +      D++ T K  E +++   +  S+   W ++S D    E +        R
Sbjct: 1462 NHVKESPAKPVWDTNVTRKSHEADNTWNTSAFSKSNVWGSQSFDKVHSEGSDG-----GR 1516

Query: 214  KSDVESPSGWQENLEQKAWSAKLPGIKECQGNKSSWTA 101
             ++ + P    ++ + + W++     +  Q N S+ +A
Sbjct: 1517 WNENQVPDRKNQSWKSRGWNSSNATDRRTQRNHSNKSA 1554


>ref|XP_008812396.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1-like [Phoenix dactylifera]
          Length = 1656

 Score =  598 bits (1541), Expect = 0.0
 Identities = 292/441 (66%), Positives = 354/441 (80%), Gaps = 3/441 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVL+SS S NSSWE MKEILLCK  ++N + DRRV+LYLN+C CGKKFC+ENAA
Sbjct: 803  SNPAYKAVLESSQSNNSSWELMKEILLCKVTFKNVVTDRRVILYLNDCFCGKKFCKENAA 862

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            + VQNCL+ V LK CA D SIEYQK+I L +SS T SGLVGHIHLD MRLK+LN++ D I
Sbjct: 863  ITVQNCLKRVTLKDCACDFSIEYQKEISLRDSSETTSGLVGHIHLDKMRLKLLNRSPDEI 922

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVD- 1842
            L KCQ+V  G+ +KKG LS+ FRR  L  SECC ++QP+ GNLS FPCLQFSY       
Sbjct: 923  LRKCQDVIFGYGKKKGKLSHFFRRIILLVSECCSTRQPDVGNLSPFPCLQFSYCDQTATP 982

Query: 1841 --ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELAL 1668
              E+LE G+H+M NTICPILLDTI+KGDPRV   NI+WTGP ATSWV +  +TLKGE+A+
Sbjct: 983  DCESLERGIHVMANTICPILLDTIIKGDPRVREANIVWTGPYATSWVRNSCKTLKGEVAV 1042

Query: 1667 EVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRL 1488
            EVVV+K A+R+ GDAWR V+DACLPVMHLI+T RSIPYGIQQ++EL GISCAFDQ+VQRL
Sbjct: 1043 EVVVEKDASRRHGDAWRTVIDACLPVMHLINTRRSIPYGIQQLQELLGISCAFDQAVQRL 1102

Query: 1487 SKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMK 1308
            S  I MV+KGV+K+HL+LV N+M+CTGNLIGFNT+G+KAL RSLKVQVPFTEATL+TPMK
Sbjct: 1103 SASITMVAKGVLKDHLILVANSMSCTGNLIGFNTAGYKALXRSLKVQVPFTEATLITPMK 1162

Query: 1307 CFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLA 1128
            CFERAAEKCHTD+L SVVSS  WGKHVA+GTG+ F+++W  K+Q+  N+++GK  YD L 
Sbjct: 1163 CFERAAEKCHTDSLTSVVSSCLWGKHVAIGTGSPFQILW-NKRQMAENQNIGKGFYDFLE 1221

Query: 1127 WVREPQEKDLPGACLGSDIED 1065
             VR   + +    C   D++D
Sbjct: 1222 LVRTSSQGEAGNGC-SVDVDD 1241



 Score = 81.3 bits (199), Expect = 7e-12
 Identities = 72/285 (25%), Positives = 116/285 (40%), Gaps = 17/285 (5%)
 Frame = -3

Query: 910  KDKTSADNGN--KSRWEKVSPTAVESDDWQPWGSKAKPSADSGNKSSWEKASPAVIESNS 737
            K   S +NG    S WEK+S + V SD WQ W +  +P  D+   S W+           
Sbjct: 1274 KKDISMENGKVGNSSWEKLSDSVVGSDRWQGWENGNQPEMDT--SSGWQ----------- 1320

Query: 736  QWGRKEKPSTDNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSWDT 557
                      DNG +       P +  SD  QG GN       +S++PT R +VWSSWD 
Sbjct: 1321 --------GWDNGKQ-------PFIDRSDRSQGWGNERVTDRENSKLPTARPSVWSSWDA 1365

Query: 556  AKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTRVNEPDSGW 377
            + V+  +Q++  + +    +S       KS IW       V+     +  ++ N  D GW
Sbjct: 1366 SDVQERSQASSPKSQPRHVAS-----SSKSRIWSSQSSSKVADGSSVDTTSKGNAQD-GW 1419

Query: 376  KERKGN------DSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTG----NKSS 227
                 +      D++ T K  E +++   +  S+   W  +S D    E +     N++ 
Sbjct: 1420 NHVTESPAKPVWDTNITRKSHEADNTWNTSAFSKSNVWDGQSFDKVHNEGSDGGRWNENQ 1479

Query: 226  WTARKSDVESPSGWQ-----ENLEQKAWSAKLPGIKECQGNKSSW 107
             T RK+      GW      +   Q+ +S K  G+ +   N+  W
Sbjct: 1480 ATDRKNQSWKSHGWNSSNATDRRTQRNYSNKSLGMPD---NRKGW 1521


>ref|XP_018679039.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1444

 Score =  586 bits (1511), Expect = 0.0
 Identities = 289/445 (64%), Positives = 346/445 (77%), Gaps = 3/445 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S  AYKAVLDSS S NSSWE MKEILLCK +Y+ND+ DRRV+LYLN+CCC K+FC+ENAA
Sbjct: 844  SNLAYKAVLDSSQSNNSSWELMKEILLCKVSYKNDVSDRRVILYLNDCCCQKRFCKENAA 903

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
              V NCL+ V LK CA +  IEYQKQIG+ +SS T SGLVGHIHLD M+LK+LN   D I
Sbjct: 904  FTVLNCLKRVTLKDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDI 963

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDE 1839
            LHKCQ V   + +KKG LS+ FRR FLS+ +CC  +QP+DGNL   PCLQFSY      +
Sbjct: 964  LHKCQAVIFSYGKKKGQLSHFFRRIFLSTCKCCSIKQPSDGNLCHLPCLQFSYADANASQ 1023

Query: 1838 ---TLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELAL 1668
               +LE  +H+M  TICPILLDTIVKGDPRV  V I+W GPDATSWV S  +TLKG+L L
Sbjct: 1024 NNISLERAIHVMSETICPILLDTIVKGDPRVHEVKIVWIGPDATSWVGSSCKTLKGDLGL 1083

Query: 1667 EVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRL 1488
            EVV+ + A R+ GDAWR VLDACLPVMHLIDT RSIPYGIQQI+E+ GISCAFDQ+VQRL
Sbjct: 1084 EVVLGQDAVRQSGDAWRTVLDACLPVMHLIDTGRSIPYGIQQIQEVLGISCAFDQAVQRL 1143

Query: 1487 SKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMK 1308
            SK I+MVSKGV+KEHL+LV N+MTCTG LIGFNT G+KALFRS KV+VPFT ATL TPMK
Sbjct: 1144 SKSIKMVSKGVMKEHLLLVANSMTCTGKLIGFNTGGYKALFRSFKVEVPFTAATLFTPMK 1203

Query: 1307 CFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLA 1128
            CFERAAEKC  D+L SVVSS SWGK+VA+GTG  F+++W  K+Q+  N+D+GK VYD L 
Sbjct: 1204 CFERAAEKCQVDSLASVVSSCSWGKNVAIGTGAPFQILW-DKKQMAMNKDIGKGVYDFLE 1262

Query: 1127 WVREPQEKDLPGACLGSDIEDFLDD 1053
             +RE    +  G  L +D+++  ++
Sbjct: 1263 LLRETSSGEATGRYL-ADVDELAEE 1286


>ref|XP_009391189.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
            acuminata subsp. malaccensis]
 ref|XP_009391190.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1738

 Score =  586 bits (1511), Expect = 0.0
 Identities = 289/445 (64%), Positives = 346/445 (77%), Gaps = 3/445 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S  AYKAVLDSS S NSSWE MKEILLCK +Y+ND+ DRRV+LYLN+CCC K+FC+ENAA
Sbjct: 844  SNLAYKAVLDSSQSNNSSWELMKEILLCKVSYKNDVSDRRVILYLNDCCCQKRFCKENAA 903

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
              V NCL+ V LK CA +  IEYQKQIG+ +SS T SGLVGHIHLD M+LK+LN   D I
Sbjct: 904  FTVLNCLKRVTLKDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINPDDI 963

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDE 1839
            LHKCQ V   + +KKG LS+ FRR FLS+ +CC  +QP+DGNL   PCLQFSY      +
Sbjct: 964  LHKCQAVIFSYGKKKGQLSHFFRRIFLSTCKCCSIKQPSDGNLCHLPCLQFSYADANASQ 1023

Query: 1838 ---TLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELAL 1668
               +LE  +H+M  TICPILLDTIVKGDPRV  V I+W GPDATSWV S  +TLKG+L L
Sbjct: 1024 NNISLERAIHVMSETICPILLDTIVKGDPRVHEVKIVWIGPDATSWVGSSCKTLKGDLGL 1083

Query: 1667 EVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRL 1488
            EVV+ + A R+ GDAWR VLDACLPVMHLIDT RSIPYGIQQI+E+ GISCAFDQ+VQRL
Sbjct: 1084 EVVLGQDAVRQSGDAWRTVLDACLPVMHLIDTGRSIPYGIQQIQEVLGISCAFDQAVQRL 1143

Query: 1487 SKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMK 1308
            SK I+MVSKGV+KEHL+LV N+MTCTG LIGFNT G+KALFRS KV+VPFT ATL TPMK
Sbjct: 1144 SKSIKMVSKGVMKEHLLLVANSMTCTGKLIGFNTGGYKALFRSFKVEVPFTAATLFTPMK 1203

Query: 1307 CFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLA 1128
            CFERAAEKC  D+L SVVSS SWGK+VA+GTG  F+++W  K+Q+  N+D+GK VYD L 
Sbjct: 1204 CFERAAEKCQVDSLASVVSSCSWGKNVAIGTGAPFQILW-DKKQMAMNKDIGKGVYDFLE 1262

Query: 1127 WVREPQEKDLPGACLGSDIEDFLDD 1053
             +RE    +  G  L +D+++  ++
Sbjct: 1263 LLRETSSGEATGRYL-ADVDELAEE 1286


>ref|XP_020090098.1| DNA-directed RNA polymerase V subunit 1 [Ananas comosus]
          Length = 1800

 Score =  551 bits (1419), Expect = e-172
 Identities = 270/446 (60%), Positives = 339/446 (76%), Gaps = 4/446 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS S NSSWE MKEILL K +Y+ND+ DRRV+LYLN+C CGKKFC+E AA
Sbjct: 847  SNPAYKAVLDSSQSNNSSWELMKEILLTKVSYKNDVNDRRVILYLNDCFCGKKFCKERAA 906

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            LAVQ+CL+ V L+ C  D  IEYQK+I LP +    SGLVGHIHLD M+L+ LN++ D +
Sbjct: 907  LAVQSCLKRVTLEDCVTDFLIEYQKEIILPGNPEPTSGLVGHIHLDKMQLESLNRSIDEV 966

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDE 1839
            LH C+EV   + +KKG  S++F++  L +SECC  Q+  D NLS  PCLQFSY    V  
Sbjct: 967  LHTCEEVILKNAKKKGQFSHLFKKITLMASECCSIQKAKDSNLSRTPCLQFSYCDENVAP 1026

Query: 1838 TLEHG---MHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELAL 1668
            + E+    + ++ NT+ P LLDTIVKGDPRV    ++W GPDATSWV +   TLKGELA+
Sbjct: 1027 SCEYFEGIVQVLANTVYPTLLDTIVKGDPRVHEAKVVWVGPDATSWVRNSSNTLKGELAV 1086

Query: 1667 EVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRL 1488
            E+V++K AA   GDAWR  +DACLPVM LID  RSIPYG+QQI+ELFGISCAFDQ+V+R+
Sbjct: 1087 EMVIEKSAAPHNGDAWRTAMDACLPVMRLIDARRSIPYGVQQIRELFGISCAFDQAVERM 1146

Query: 1487 SKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMK 1308
            S  IR V+KGV+K+HL+LV ++MTCTG L GFNT G+KA FRSLKVQVPFTEATL TPMK
Sbjct: 1147 STSIRKVAKGVLKDHLILVASSMTCTGKLNGFNTGGYKATFRSLKVQVPFTEATLFTPMK 1206

Query: 1307 CFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLA 1128
            CFERAAEKCH+D+L S VSS SWGKHVALGTG+ F++IW  K+Q+  ++D+GK +YD L 
Sbjct: 1207 CFERAAEKCHSDSLDSGVSSCSWGKHVALGTGSSFQIIW-DKKQMANDKDIGKGLYDFLV 1265

Query: 1127 WVR-EPQEKDLPGACLGSDIEDFLDD 1053
             VR    +++  GACL  D++D  ++
Sbjct: 1266 MVRTSGDQREANGACL-EDVDDLEEE 1290


>gb|PKU59438.1| DNA-directed RNA polymerase E subunit 1 [Dendrobium catenatum]
          Length = 1205

 Score =  519 bits (1336), Expect = e-165
 Identities = 264/423 (62%), Positives = 318/423 (75%), Gaps = 3/423 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS STNSSWE MKEILL K  YQN   DRRVVLYLN+C CGKKFC+E AA
Sbjct: 208  SNPAYKAVLDSSLSTNSSWELMKEILLSKVGYQNVFNDRRVVLYLNDCLCGKKFCKEMAA 267

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
             AVQ+CL+   L+ CA + SIEY+K +   +S    SGLVGHIHLD   LK  N+ T+ I
Sbjct: 268  FAVQDCLKKFTLRDCASEFSIEYKKNMVACDSLEAVSGLVGHIHLDRGMLKAWNKRTEEI 327

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF--AGAV 1845
            L KCQE+     +KKG LS +F+   L++SECC  Q  +D NLS  PCLQF YF   G +
Sbjct: 328  LLKCQEILSSRQKKKGPLSFLFKGIVLTTSECC--QHSDDANLSSVPCLQFYYFDRGGKI 385

Query: 1844 -DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELAL 1668
             DE+L+  +HIM N ICP+LL+T++KGD RVD  NIIW  P  TS V    R +KGELA+
Sbjct: 386  SDESLDRVIHIMANVICPMLLETVIKGDSRVDLANIIWIEPTTTSSVRDR-RPMKGELAI 444

Query: 1667 EVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRL 1488
            EVV++K  AR+ GDAWR VLDACLPVMHLID  RSIPYGI+Q++ L GISC+F+QSV RL
Sbjct: 445  EVVIEKSFARQSGDAWRTVLDACLPVMHLIDMRRSIPYGIKQVEHLLGISCSFEQSVLRL 504

Query: 1487 SKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMK 1308
            S  I+MV+KGV+KEHL+LV N+MTCTGN +GFN SGFK L RSLK+Q+PFTEATL TP+K
Sbjct: 505  SASIKMVAKGVLKEHLILVANSMTCTGNFLGFNNSGFKKLLRSLKIQMPFTEATLFTPIK 564

Query: 1307 CFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLA 1128
            CFERAA+KCHTD L S+VSS  WGKHVA+GTG+ F+V W  +QQV  N+DV KDVY+ L 
Sbjct: 565  CFERAAQKCHTDTLTSIVSSCLWGKHVAVGTGSCFKVFW-DRQQVKANKDVEKDVYEFLE 623

Query: 1127 WVR 1119
             V+
Sbjct: 624  LVQ 626



 Score = 63.5 bits (153), Expect = 2e-06
 Identities = 84/337 (24%), Positives = 126/337 (37%), Gaps = 62/337 (18%)
 Frame = -3

Query: 985  NGNKSNWENVSPTVVESDNWQAWGSKDKTS--------ADNGNKSRWEKVS---PTAVES 839
            +G+KSNW+N S + +E +NW+ W S+ K            +G  S W+  S   PT   S
Sbjct: 682  DGDKSNWQNGSESAIEQNNWKGWDSRKKPEEVDSQSALKKDGAWSGWDTTSEKEPTKFGS 741

Query: 838  ---DDWQPWGSKAKPSADSGNKSS------WEK--------ASP-----AVIESNSQWGR 725
               +  + WGS  K S D+GN  S      W +        +SP     +  ES+  W  
Sbjct: 742  QMPEVQRGWGSSKKTSVDNGNAESANNGNQWNENKAADGPWSSPGWGLTSESESSKTWSN 801

Query: 724  KEKP-------STDNGN---KSGWEKLSPMVAESDSWQGRGNRDQL--APGSSEMPTTRS 581
              KP       +T NG+   K  +EK S    ES  W      D    A G ++   T S
Sbjct: 802  PCKPLDMTSKEATRNGHNPEKVSFEKSS----ESSKWNEIRTADNANRAWGLADTSKTCS 857

Query: 580  AVWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTR 401
            +    W+T  +         + E  GF         +S +          S  WNE  + 
Sbjct: 858  SPKPIWNTDWLSKGGAGNNYKHENAGFG--------RSSL----------SDKWNENNSA 899

Query: 400  VNEPDSGWKERKGNDSSWTAKKPE-----VESSSGW-ADNSEKKAWPAKSPDSGWKE--- 248
            ++  D  W     ++S  +  KP         +  W + N EK ++   S  + W E   
Sbjct: 900  IDHRDGAWVSTGESESCKSPVKPTWNTDGTSKAGTWNSPNYEKASFGRSSETNKWNEKRT 959

Query: 247  -----NTGNKSSW---TARKSDVESPSGWQENLEQKA 161
                 + G   +W    A  S   SP     N+E KA
Sbjct: 960  TDNENSAGGSRAWGSSDAACSIWRSPPEGPGNVEGKA 996


>gb|AQK60570.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1160

 Score =  512 bits (1318), Expect = e-163
 Identities = 245/426 (57%), Positives = 321/426 (75%), Gaps = 1/426 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AA
Sbjct: 73   SNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAA 132

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            LAVQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  I
Sbjct: 133  LAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDI 192

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-D 1842
            L KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  
Sbjct: 193  LQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLS 252

Query: 1841 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1662
            E++E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE+
Sbjct: 253  ESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEI 312

Query: 1661 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 1482
            +V+K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS 
Sbjct: 313  IVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLST 372

Query: 1481 CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 1302
             ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCF
Sbjct: 373  TVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCF 432

Query: 1301 ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 1122
            E+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA V
Sbjct: 433  EKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALV 491

Query: 1121 REPQEK 1104
            R  QEK
Sbjct: 492  RTDQEK 497


>gb|AQK60584.1| DNA-directed RNA polymerase V subunit 1, partial [Zea mays]
          Length = 1436

 Score =  512 bits (1318), Expect = e-160
 Identities = 245/426 (57%), Positives = 321/426 (75%), Gaps = 1/426 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AA
Sbjct: 845  SNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAA 904

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            LAVQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  I
Sbjct: 905  LAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDI 964

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-D 1842
            L KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  
Sbjct: 965  LQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLS 1024

Query: 1841 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1662
            E++E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE+
Sbjct: 1025 ESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEI 1084

Query: 1661 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 1482
            +V+K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS 
Sbjct: 1085 IVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLST 1144

Query: 1481 CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 1302
             ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCF
Sbjct: 1145 TVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCF 1204

Query: 1301 ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 1122
            E+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA V
Sbjct: 1205 EKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALV 1263

Query: 1121 REPQEK 1104
            R  QEK
Sbjct: 1264 RTDQEK 1269


>ref|XP_020688039.1| DNA-directed RNA polymerase V subunit 1 [Dendrobium catenatum]
 ref|XP_020688040.1| DNA-directed RNA polymerase V subunit 1 [Dendrobium catenatum]
 ref|XP_020688042.1| DNA-directed RNA polymerase V subunit 1 [Dendrobium catenatum]
          Length = 1839

 Score =  519 bits (1336), Expect = e-160
 Identities = 264/423 (62%), Positives = 318/423 (75%), Gaps = 3/423 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS STNSSWE MKEILL K  YQN   DRRVVLYLN+C CGKKFC+E AA
Sbjct: 842  SNPAYKAVLDSSLSTNSSWELMKEILLSKVGYQNVFNDRRVVLYLNDCLCGKKFCKEMAA 901

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
             AVQ+CL+   L+ CA + SIEY+K +   +S    SGLVGHIHLD   LK  N+ T+ I
Sbjct: 902  FAVQDCLKKFTLRDCASEFSIEYKKNMVACDSLEAVSGLVGHIHLDRGMLKAWNKRTEEI 961

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYF--AGAV 1845
            L KCQE+     +KKG LS +F+   L++SECC  Q  +D NLS  PCLQF YF   G +
Sbjct: 962  LLKCQEILSSRQKKKGPLSFLFKGIVLTTSECC--QHSDDANLSSVPCLQFYYFDRGGKI 1019

Query: 1844 -DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELAL 1668
             DE+L+  +HIM N ICP+LL+T++KGD RVD  NIIW  P  TS V    R +KGELA+
Sbjct: 1020 SDESLDRVIHIMANVICPMLLETVIKGDSRVDLANIIWIEPTTTSSVRDR-RPMKGELAI 1078

Query: 1667 EVVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRL 1488
            EVV++K  AR+ GDAWR VLDACLPVMHLID  RSIPYGI+Q++ L GISC+F+QSV RL
Sbjct: 1079 EVVIEKSFARQSGDAWRTVLDACLPVMHLIDMRRSIPYGIKQVEHLLGISCSFEQSVLRL 1138

Query: 1487 SKCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMK 1308
            S  I+MV+KGV+KEHL+LV N+MTCTGN +GFN SGFK L RSLK+Q+PFTEATL TP+K
Sbjct: 1139 SASIKMVAKGVLKEHLILVANSMTCTGNFLGFNNSGFKKLLRSLKIQMPFTEATLFTPIK 1198

Query: 1307 CFERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLA 1128
            CFERAA+KCHTD L S+VSS  WGKHVA+GTG+ F+V W  +QQV  N+DV KDVY+ L 
Sbjct: 1199 CFERAAQKCHTDTLTSIVSSCLWGKHVAVGTGSCFKVFW-DRQQVKANKDVEKDVYEFLE 1257

Query: 1127 WVR 1119
             V+
Sbjct: 1258 LVQ 1260



 Score = 63.5 bits (153), Expect = 2e-06
 Identities = 84/337 (24%), Positives = 126/337 (37%), Gaps = 62/337 (18%)
 Frame = -3

Query: 985  NGNKSNWENVSPTVVESDNWQAWGSKDKTS--------ADNGNKSRWEKVS---PTAVES 839
            +G+KSNW+N S + +E +NW+ W S+ K            +G  S W+  S   PT   S
Sbjct: 1316 DGDKSNWQNGSESAIEQNNWKGWDSRKKPEEVDSQSALKKDGAWSGWDTTSEKEPTKFGS 1375

Query: 838  ---DDWQPWGSKAKPSADSGNKSS------WEK--------ASP-----AVIESNSQWGR 725
               +  + WGS  K S D+GN  S      W +        +SP     +  ES+  W  
Sbjct: 1376 QMPEVQRGWGSSKKTSVDNGNAESANNGNQWNENKAADGPWSSPGWGLTSESESSKTWSN 1435

Query: 724  KEKP-------STDNGN---KSGWEKLSPMVAESDSWQGRGNRDQL--APGSSEMPTTRS 581
              KP       +T NG+   K  +EK S    ES  W      D    A G ++   T S
Sbjct: 1436 PCKPLDMTSKEATRNGHNPEKVSFEKSS----ESSKWNEIRTADNANRAWGLADTSKTCS 1491

Query: 580  AVWSSWDTAKVRHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVVSSSGWNEPVTR 401
            +    W+T  +         + E  GF         +S +          S  WNE  + 
Sbjct: 1492 SPKPIWNTDWLSKGGAGNNYKHENAGFG--------RSSL----------SDKWNENNSA 1533

Query: 400  VNEPDSGWKERKGNDSSWTAKKPE-----VESSSGW-ADNSEKKAWPAKSPDSGWKE--- 248
            ++  D  W     ++S  +  KP         +  W + N EK ++   S  + W E   
Sbjct: 1534 IDHRDGAWVSTGESESCKSPVKPTWNTDGTSKAGTWNSPNYEKASFGRSSETNKWNEKRT 1593

Query: 247  -----NTGNKSSW---TARKSDVESPSGWQENLEQKA 161
                 + G   +W    A  S   SP     N+E KA
Sbjct: 1594 TDNENSAGGSRAWGSSDAACSIWRSPPEGPGNVEGKA 1630


>gb|AQK60579.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1465

 Score =  512 bits (1318), Expect = e-160
 Identities = 245/426 (57%), Positives = 321/426 (75%), Gaps = 1/426 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AA
Sbjct: 845  SNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAA 904

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            LAVQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  I
Sbjct: 905  LAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDI 964

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-D 1842
            L KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  
Sbjct: 965  LQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLS 1024

Query: 1841 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1662
            E++E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE+
Sbjct: 1025 ESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEI 1084

Query: 1661 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 1482
            +V+K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS 
Sbjct: 1085 IVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLST 1144

Query: 1481 CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 1302
             ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCF
Sbjct: 1145 TVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCF 1204

Query: 1301 ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 1122
            E+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA V
Sbjct: 1205 EKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALV 1263

Query: 1121 REPQEK 1104
            R  QEK
Sbjct: 1264 RTDQEK 1269


>ref|XP_020576180.1| DNA-directed RNA polymerase V subunit 1 [Phalaenopsis equestris]
          Length = 1827

 Score =  518 bits (1333), Expect = e-160
 Identities = 263/422 (62%), Positives = 319/422 (75%), Gaps = 2/422 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS STNSSWE MKEILL K  YQN + DRRVVLYLN+C CGK+FC+E AA
Sbjct: 842  SNPAYKAVLDSSLSTNSSWELMKEILLSKVGYQNVINDRRVVLYLNDCLCGKRFCKEMAA 901

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
             AVQ+CL+   L+ CA + +IEY+KQI   +     SGLVGHIHLD  RLK  N   + I
Sbjct: 902  FAVQDCLKKFTLRDCASEFTIEYKKQIVPCDGLDAVSGLVGHIHLDKGRLKAWNTRIEEI 961

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-- 1845
            L KCQE+  G  +KKG LS +F+   LS+SECC  QQP+D  L+  PCLQF +  G    
Sbjct: 962  LPKCQEIISGSQKKKGPLSFLFKGIVLSTSECC--QQPHDATLTGTPCLQFYFDIGGKIP 1019

Query: 1844 DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALE 1665
             E+L+  +HIM N +CP+LL+TI+KGD RVD+ NIIW  P  +S V    R LKGELA+E
Sbjct: 1020 GESLDRLIHIMANVVCPMLLETIIKGDSRVDSANIIWVEPTNSSSVRDR-RPLKGELAIE 1078

Query: 1664 VVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLS 1485
            + V +  AR+ GDAWR VLDACLPVMHLIDT RS+PYGI+Q+++L GISC+F+QSVQRLS
Sbjct: 1079 IFVGRSYARQNGDAWRTVLDACLPVMHLIDTRRSVPYGIKQVEDLLGISCSFEQSVQRLS 1138

Query: 1484 KCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKC 1305
              I+MV+KGV+KEHL+LV N+MTCTG+L+GFN SGFK L RSL VQ+PFTEATL TP+KC
Sbjct: 1139 ASIKMVAKGVLKEHLILVANSMTCTGSLLGFNNSGFKKLLRSLNVQMPFTEATLFTPIKC 1198

Query: 1304 FERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAW 1125
            FERAA+KCHTD L S+VSS  WGKHVA+GTG+ F+V W  KQQV  N+DV KDVYD L  
Sbjct: 1199 FERAAQKCHTDTLTSIVSSCLWGKHVAVGTGSCFKVFW-DKQQVKANQDVEKDVYDFLEL 1257

Query: 1124 VR 1119
            V+
Sbjct: 1258 VQ 1259



 Score = 64.3 bits (155), Expect = 1e-06
 Identities = 69/307 (22%), Positives = 114/307 (37%), Gaps = 39/307 (12%)
 Frame = -3

Query: 988  DNGNKSNWENVSPTVVESDNWQAWGSKDK----------------TSADNGNKSRWEKVS 857
            ++GNK NWE+ S + ++ ++WQ W SK K                +  D GN+    K  
Sbjct: 1313 EDGNKLNWESGSESSMKPNSWQGWESKKKPDKLDSQSSLKKDGAWSGWDIGNEKESTKYG 1372

Query: 856  PTAVESDDWQPWGSKAK-PSADSGNK------SSWEKASPA-VIESNSQWGRKEKPST-- 707
                E    Q WG  +K PS D+GN         W + S A     +S WG   + +   
Sbjct: 1373 SQTPEVQ--QGWGGSSKPPSVDTGNSERVDNGKQWNENSEANGAWPSSGWGLASESNVSK 1430

Query: 706  --DNGNKSGWEKLSPMVAESDSWQGRGNRDQLAPGSSEMPTTRSAVWSSWDTAKV----- 548
              ++ NK  W       ++  S   RGN       + +    RS+  + W+  +V     
Sbjct: 1431 TWNSSNKPAWN------SDMTSKAARGN----GHNAEKANFGRSSESNDWNENRVANHRE 1480

Query: 547  RHSNQSTQSRKEFNGFSSFDNDDVQKSPIWKPNKPEVV------SSSGWNEPVTRVNEPD 386
            R  N +  S+   +    ++ D + K   W   K E +       S  WNE     +  D
Sbjct: 1481 RDWNLTDASKSCSSSKPVWNTDGLSKGGAWSSFKHENIRSERSFQSDKWNENNNATDHGD 1540

Query: 385  SGWKERKGNDSSWTAKKPEVESSSGWADNSEKKAWPAKSPDSGWKENTGNKSSWTARKSD 206
            S W    G   SW +    +  + G    S+  AW +   +      +   ++W  + + 
Sbjct: 1541 SAWGS-TGESESWKSPAKTILDTDG---TSKAGAWDSPKTEMVSFGRSSELNNWNEKGAT 1596

Query: 205  VESPSGW 185
                S W
Sbjct: 1597 DNGDSSW 1603


>ref|XP_010246063.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
 ref|XP_010246064.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
 ref|XP_010246066.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Nelumbo nucifera]
          Length = 1908

 Score =  518 bits (1334), Expect = e-159
 Identities = 258/438 (58%), Positives = 319/438 (72%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS S NSSWE MKEILLC+A+++NDLIDRRV+LYLN+C CG  +C+E AA
Sbjct: 846  SNPAYKAVLDSSPSNNSSWELMKEILLCRASFKNDLIDRRVILYLNDCGCGGYYCKEKAA 905

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
              VQN L+ V L   A+D SI+YQKQ   P +S T +GLVGHIHLD M LK LN++   I
Sbjct: 906  YIVQNHLKRVSLMDIAVDFSIKYQKQCIFPGNSVTNAGLVGHIHLDKMSLKALNRSMADI 965

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAVDE 1839
            L  CQE      +KK  L +I RR  L  SECC  + P D   SEFPCLQF +   + D 
Sbjct: 966  LKDCQETLNSFRKKKDQLGHILRRVLLLVSECCSVRLP-DKERSEFPCLQFLWEDTSSD- 1023

Query: 1838 TLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEVV 1659
            +++    IM N +CPILL T +KGDP+V + NI+WT PD  SWV +P +   GEL LEVV
Sbjct: 1024 SIQRISKIMANKVCPILLGTNIKGDPQVLSANIMWTSPDVCSWVRNPCKIQNGELVLEVV 1083

Query: 1658 VQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSKC 1479
            V K A ++ GDAWR+VL++CLPV+HL+DT RSIPYGI+QI+EL GISCAFDQ+VQRLS  
Sbjct: 1084 VDKAAVKRTGDAWRVVLNSCLPVIHLVDTRRSIPYGIKQIQELLGISCAFDQAVQRLSSS 1143

Query: 1478 IRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCFE 1299
            +RMV+KGV+KEHL+L  N+MTCTGN+IGFN+ G+KAL RSL V VPFTEATL TP KCFE
Sbjct: 1144 VRMVTKGVLKEHLILAANSMTCTGNMIGFNSGGYKALLRSLNVHVPFTEATLFTPRKCFE 1203

Query: 1298 RAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWVR 1119
            +AA+KCH D+L S+V+S SWGKHV +GTG  FE++W  K ++  N+D   DVYD L  VR
Sbjct: 1204 KAAQKCHMDSLSSIVASCSWGKHVTVGTGAQFEILWNNK-EMGVNQDGEIDVYDFLQLVR 1262

Query: 1118 EPQEKDLPGACLGSDIED 1065
               E D    CLG +I+D
Sbjct: 1263 GSNEGDSFTTCLGQEIDD 1280


>gb|AQK60587.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1615

 Score =  512 bits (1318), Expect = e-159
 Identities = 245/426 (57%), Positives = 321/426 (75%), Gaps = 1/426 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AA
Sbjct: 528  SNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAA 587

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            LAVQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  I
Sbjct: 588  LAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDI 647

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-D 1842
            L KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  
Sbjct: 648  LQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLS 707

Query: 1841 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1662
            E++E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE+
Sbjct: 708  ESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEI 767

Query: 1661 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 1482
            +V+K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS 
Sbjct: 768  IVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLST 827

Query: 1481 CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 1302
             ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCF
Sbjct: 828  TVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCF 887

Query: 1301 ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 1122
            E+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA V
Sbjct: 888  EKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALV 946

Query: 1121 REPQEK 1104
            R  QEK
Sbjct: 947  RTDQEK 952


>gb|AQK60574.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1663

 Score =  512 bits (1318), Expect = e-158
 Identities = 245/426 (57%), Positives = 321/426 (75%), Gaps = 1/426 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AA
Sbjct: 845  SNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAA 904

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            LAVQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  I
Sbjct: 905  LAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDI 964

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-D 1842
            L KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  
Sbjct: 965  LQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLS 1024

Query: 1841 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1662
            E++E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE+
Sbjct: 1025 ESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEI 1084

Query: 1661 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 1482
            +V+K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS 
Sbjct: 1085 IVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLST 1144

Query: 1481 CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 1302
             ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCF
Sbjct: 1145 TVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCF 1204

Query: 1301 ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 1122
            E+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA V
Sbjct: 1205 EKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALV 1263

Query: 1121 REPQEK 1104
            R  QEK
Sbjct: 1264 RTDQEK 1269


>ref|XP_004951807.1| DNA-directed RNA polymerase V subunit 1 [Setaria italica]
          Length = 2038

 Score =  516 bits (1330), Expect = e-158
 Identities = 247/427 (57%), Positives = 325/427 (76%), Gaps = 2/427 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            STPAY+AVLDSS S N+SWE MKEIL  K  Y+ND+ DR+V+L+LN+C C KKFC+E AA
Sbjct: 845  STPAYRAVLDSSQSNNASWESMKEILQTKVGYKNDMKDRKVILFLNDCSCPKKFCKERAA 904

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            L VQ+CLR V L  CA D+SIE+QKQI L  +S  A  LVGHIHLD  +L+ +N +T  I
Sbjct: 905  LTVQSCLRRVTLADCATDISIEHQKQINLDETSEAAPTLVGHIHLDKAQLERINISTQDI 964

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAG--AV 1845
            L KC+E++  + +KKGHL ++F++   S+ +C  +Q   DG L   PC+QFS+      +
Sbjct: 965  LQKCEEISGRYGKKKGHLCHLFKKITFSTCDCSFAQNTIDGYLHVAPCVQFSFSDDNTIL 1024

Query: 1844 DETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALE 1665
             E++E  ++++ +++C +LLDTI+KGDPR+ +  IIW   +ATSWV +   TLKGE  LE
Sbjct: 1025 SESVERAVNVIADSVCSVLLDTIIKGDPRIQSAKIIWVESEATSWVKNTQNTLKGEPTLE 1084

Query: 1664 VVVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLS 1485
            ++V+K  A + G AWR V+DAC+PV++LIDT RSIPYGIQQ+KEL GISCAFDQ VQRLS
Sbjct: 1085 IIVEKDEAVRNGYAWRTVMDACIPVLNLIDTRRSIPYGIQQVKELLGISCAFDQVVQRLS 1144

Query: 1484 KCIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKC 1305
              ++MV+KGV+K+HL+LV N+MTCTGNLIGFNTSG+KA FRSLKVQVPFTE+TL TPMKC
Sbjct: 1145 TTVKMVAKGVLKDHLILVANSMTCTGNLIGFNTSGYKATFRSLKVQVPFTESTLFTPMKC 1204

Query: 1304 FERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAW 1125
            FE+AAEKC +D+LG VVSS SWGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA 
Sbjct: 1205 FEKAAEKCDSDSLGCVVSSCSWGKHAAIGTGSSFQILWNE-NQLKSNKEYGDGLYDFLAL 1263

Query: 1124 VREPQEK 1104
            VR  QEK
Sbjct: 1264 VRTDQEK 1270


>gb|AQK60567.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1719

 Score =  512 bits (1318), Expect = e-158
 Identities = 245/426 (57%), Positives = 321/426 (75%), Gaps = 1/426 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AA
Sbjct: 632  SNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAA 691

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            LAVQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  I
Sbjct: 692  LAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDI 751

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-D 1842
            L KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  
Sbjct: 752  LQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLS 811

Query: 1841 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1662
            E++E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE+
Sbjct: 812  ESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEI 871

Query: 1661 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 1482
            +V+K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS 
Sbjct: 872  IVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLST 931

Query: 1481 CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 1302
             ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCF
Sbjct: 932  TVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCF 991

Query: 1301 ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 1122
            E+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA V
Sbjct: 992  EKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALV 1050

Query: 1121 REPQEK 1104
            R  QEK
Sbjct: 1051 RTDQEK 1056


>gb|AQK60573.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
 gb|AQK60577.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
 gb|AQK60582.1| DNA-directed RNA polymerase V subunit 1 [Zea mays]
          Length = 1776

 Score =  512 bits (1318), Expect = e-158
 Identities = 245/426 (57%), Positives = 321/426 (75%), Gaps = 1/426 (0%)
 Frame = -2

Query: 2378 STPAYKAVLDSSNSTNSSWEQMKEILLCKANYQNDLIDRRVVLYLNNCCCGKKFCRENAA 2199
            S PAYKAVLDSS S N+SWE MKEIL  + +Y+ND+ DR+VVL+LN+C C KKFC+E AA
Sbjct: 689  SNPAYKAVLDSSQSNNASWESMKEILQTRTSYKNDVKDRKVVLFLNDCSCAKKFCKERAA 748

Query: 2198 LAVQNCLRSVMLKHCALDLSIEYQKQIGLPNSSGTASGLVGHIHLDMMRLKILNQTTDGI 2019
            LAVQ+CL+ V L  CA D+ IE+QKQI L  +S  A  LVGHIHLD   L+ +N +T  I
Sbjct: 749  LAVQSCLKRVTLGDCATDICIEHQKQINLDGTSEAAPTLVGHIHLDKGHLERINISTQDI 808

Query: 2018 LHKCQEVAQGHTRKKGHLSNIFRRTFLSSSECCGSQQPNDGNLSEFPCLQFSYFAGAV-D 1842
            L KCQEV+    +KKGHL +IF++   ++ +C  +Q P DG L + PC+QF++    V  
Sbjct: 809  LQKCQEVSGRFGKKKGHLCHIFKKITFATCDCSFTQMPIDGKLHKVPCVQFAFSDDIVLS 868

Query: 1841 ETLEHGMHIMINTICPILLDTIVKGDPRVDAVNIIWTGPDATSWVSSPGRTLKGELALEV 1662
            E++E  ++++ +++C +LLDTI+KGDPR+ A  +IW   DA SWV    +  KGE ALE+
Sbjct: 869  ESIERAVNVIADSVCSVLLDTIIKGDPRIQAAKVIWVESDAASWVKHTRKVSKGESALEI 928

Query: 1661 VVQKVAARKKGDAWRIVLDACLPVMHLIDTTRSIPYGIQQIKELFGISCAFDQSVQRLSK 1482
            +V+K  A   GDAWR  +DACLPV++LIDT RSIPYGIQQ++EL GISCAFDQ VQRLS 
Sbjct: 929  IVEKDDAVSNGDAWRTAIDACLPVLNLIDTRRSIPYGIQQVRELIGISCAFDQVVQRLST 988

Query: 1481 CIRMVSKGVIKEHLVLVGNNMTCTGNLIGFNTSGFKALFRSLKVQVPFTEATLLTPMKCF 1302
             ++MV+KGV+K+HL+LV N+MTCTGNLIGFN +G+KA FRSLKVQVPFTE+TL TPMKCF
Sbjct: 989  TVKMVNKGVLKDHLILVANSMTCTGNLIGFNIAGYKATFRSLKVQVPFTESTLFTPMKCF 1048

Query: 1301 ERAAEKCHTDALGSVVSSVSWGKHVALGTGTHFEVIWGQKQQVPCNEDVGKDVYDLLAWV 1122
            E+AAEKC +D+LG VVSS +WGKH A+GTG+ F+++W +  Q+  N++ G  +YD LA V
Sbjct: 1049 EKAAEKCDSDSLGCVVSSSAWGKHAAVGTGSSFQILWNE-NQLKSNKEYGDGLYDFLALV 1107

Query: 1121 REPQEK 1104
            R  QEK
Sbjct: 1108 RTDQEK 1113