BLASTX nr result
ID: Ophiopogon27_contig00008448
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00008448
(489 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020269136.1| zinc finger CCCH domain-containing protein 4... 270 5e-85
ref|XP_010926956.1| PREDICTED: zinc finger CCCH domain-containin... 249 2e-76
ref|XP_008799098.1| PREDICTED: zinc finger CCCH domain-containin... 249 5e-76
ref|XP_017702484.1| PREDICTED: zinc finger CCCH domain-containin... 241 4e-73
ref|XP_008775232.1| PREDICTED: zinc finger CCCH domain-containin... 241 4e-73
ref|XP_010941538.1| PREDICTED: zinc finger CCCH domain-containin... 236 2e-71
ref|XP_019711187.1| PREDICTED: zinc finger CCCH domain-containin... 236 4e-71
gb|OVA10949.1| zinc finger protein [Macleaya cordata] 226 3e-67
ref|XP_020109599.1| zinc finger CCCH domain-containing protein 4... 224 1e-66
ref|XP_020109598.1| zinc finger CCCH domain-containing protein 4... 224 2e-66
ref|XP_016197709.1| 30-kDa cleavage and polyadenylation specific... 222 6e-66
ref|XP_015959242.1| LOW QUALITY PROTEIN: 30-kDa cleavage and pol... 222 7e-66
ref|XP_020588276.1| zinc finger CCCH domain-containing protein 4... 222 8e-66
ref|XP_014617341.1| PREDICTED: 30-kDa cleavage and polyadenylati... 214 1e-65
gb|KHN14347.1| Cleavage and polyadenylation specificity factor C... 218 4e-65
ref|XP_003546247.1| PREDICTED: 30-kDa cleavage and polyadenylati... 218 2e-64
ref|XP_006846022.1| 30-kDa cleavage and polyadenylation specific... 218 2e-64
ref|XP_010241185.1| PREDICTED: 30-kDa cleavage and polyadenylati... 218 2e-64
gb|KYP39096.1| Cleavage and polyadenylation specificity factor C... 216 9e-64
ref|XP_020686552.1| zinc finger CCCH domain-containing protein 4... 216 1e-63
>ref|XP_020269136.1| zinc finger CCCH domain-containing protein 45 [Asparagus
officinalis]
gb|ONK65709.1| uncharacterized protein A4U43_C06F130 [Asparagus officinalis]
Length = 603
Score = 270 bits (690), Expect = 5e-85
Identities = 131/170 (77%), Positives = 138/170 (81%), Gaps = 8/170 (4%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTN+DIKECNMYKLGFCPNGPDCRYRHVK GPPP+VEEVFQKIQHLSSFNYGSGN
Sbjct: 34 CVYKHTNDDIKECNMYKLGFCPNGPDCRYRHVKQPGPPPTVEEVFQKIQHLSSFNYGSGN 93
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPPSMQQ--------XXXXXXX 338
RFFQHKNTGYNQQAERPQFPQG +V+N P+AV+P TVEPPSMQQ
Sbjct: 94 RFFQHKNTGYNQQAERPQFPQGPAVANQPTAVRPPTTVEPPSMQQQQPQTQQSQPQHVRE 153
Query: 339 XXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
S+LANR ASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT
Sbjct: 154 NQVQSVPNGSSNLANRAASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 203
>ref|XP_010926956.1| PREDICTED: zinc finger CCCH domain-containing protein 45-like
[Elaeis guineensis]
Length = 686
Score = 249 bits (637), Expect = 2e-76
Identities = 124/173 (71%), Positives = 131/173 (75%), Gaps = 11/173 (6%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KL GPPP VEEV QKIQHLSSFNYGS N
Sbjct: 112 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLLGPPPPVEEVLQKIQHLSSFNYGSSN 171
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPP-----------SMQQXXXX 329
RFFQH+NTGYNQQAE+ QF QGS+VSN +AV+P +VEPP S QQ
Sbjct: 172 RFFQHRNTGYNQQAEKAQFVQGSAVSNQNAAVRPPPSVEPPNVQQPQSQIQQSQQQPPQP 231
Query: 330 XXXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
L + A RTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT
Sbjct: 232 TTENPVQNISNGLLNQATRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 284
>ref|XP_008799098.1| PREDICTED: zinc finger CCCH domain-containing protein 45-like
[Phoenix dactylifera]
Length = 697
Score = 249 bits (635), Expect = 5e-76
Identities = 123/173 (71%), Positives = 131/173 (75%), Gaps = 11/173 (6%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KL GPPP VEEV QKIQHLSSFNYGS N
Sbjct: 113 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLSSFNYGSSN 172
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPP-----------SMQQXXXX 329
RF+QH+NTGYNQQAE+PQF QGS+ +N +AVKP +VEPP S QQ
Sbjct: 173 RFYQHRNTGYNQQAEKPQFSQGSAGANQNAAVKPPISVEPPNVQPPQSQIQQSQQQPPQP 232
Query: 330 XXXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
L + A RTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT
Sbjct: 233 TTENPVQNISNGLLNQATRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 285
>ref|XP_017702484.1| PREDICTED: zinc finger CCCH domain-containing protein 45-like
isoform X1 [Phoenix dactylifera]
Length = 696
Score = 241 bits (615), Expect = 4e-73
Identities = 119/172 (69%), Positives = 128/172 (74%), Gaps = 10/172 (5%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KL GPPP V+EVFQKIQHLS+FNYGS N
Sbjct: 114 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVDEVFQKIQHLSAFNYGSSN 173
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKP-----LGTVEPP-----SMQQXXXXX 332
R+FQH+NT YNQQ+ERPQ QGS+V+N +A KP L V+ P QQ
Sbjct: 174 RYFQHRNTSYNQQSERPQLSQGSAVANQNAAAKPPIPVELSNVQQPQSQIQQSQQPPQPP 233
Query: 333 XXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
LS A RTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT
Sbjct: 234 ADNQVQHISNGLSKQATRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 285
>ref|XP_008775232.1| PREDICTED: zinc finger CCCH domain-containing protein 45-like
isoform X2 [Phoenix dactylifera]
Length = 696
Score = 241 bits (615), Expect = 4e-73
Identities = 119/172 (69%), Positives = 128/172 (74%), Gaps = 10/172 (5%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KL GPPP V+EVFQKIQHLS+FNYGS N
Sbjct: 114 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVDEVFQKIQHLSAFNYGSSN 173
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKP-----LGTVEPP-----SMQQXXXXX 332
R+FQH+NT YNQQ+ERPQ QGS+V+N +A KP L V+ P QQ
Sbjct: 174 RYFQHRNTSYNQQSERPQLSQGSAVANQNAAAKPPIPVELSNVQQPQSQIQQSQQPPQPP 233
Query: 333 XXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
LS A RTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT
Sbjct: 234 ADNQVQHISNGLSKQATRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 285
>ref|XP_010941538.1| PREDICTED: zinc finger CCCH domain-containing protein 45 isoform X2
[Elaeis guineensis]
Length = 683
Score = 236 bits (603), Expect = 2e-71
Identities = 119/173 (68%), Positives = 130/173 (75%), Gaps = 11/173 (6%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFN-YGSG 179
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KL GPPP VEEVFQKIQHLS+FN YGS
Sbjct: 114 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSAFNYYGSS 173
Query: 180 NRFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPPSMQQ----------XXXX 329
NR+FQH+NT YNQQ+ERPQ QGS+V+N +A KP+ VEP ++QQ
Sbjct: 174 NRYFQHRNTSYNQQSERPQLSQGSAVANQNAAAKPI-PVEPSNVQQPQTQIQQSQPPPQP 232
Query: 330 XXXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
L + A RTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT
Sbjct: 233 PPENQVQNISNALLNQATRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 285
>ref|XP_019711187.1| PREDICTED: zinc finger CCCH domain-containing protein 45 isoform X1
[Elaeis guineensis]
Length = 724
Score = 236 bits (603), Expect = 4e-71
Identities = 119/173 (68%), Positives = 130/173 (75%), Gaps = 11/173 (6%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFN-YGSG 179
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KL GPPP VEEVFQKIQHLS+FN YGS
Sbjct: 114 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSAFNYYGSS 173
Query: 180 NRFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPPSMQQ----------XXXX 329
NR+FQH+NT YNQQ+ERPQ QGS+V+N +A KP+ VEP ++QQ
Sbjct: 174 NRYFQHRNTSYNQQSERPQLSQGSAVANQNAAAKPI-PVEPSNVQQPQTQIQQSQPPPQP 232
Query: 330 XXXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
L + A RTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT
Sbjct: 233 PPENQVQNISNALLNQATRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 285
>gb|OVA10949.1| zinc finger protein [Macleaya cordata]
Length = 708
Score = 226 bits (576), Expect = 3e-67
Identities = 115/169 (68%), Positives = 123/169 (72%), Gaps = 7/169 (4%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KL GPPP VEEVFQKIQHLSSFNYGS N
Sbjct: 114 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQHLSSFNYGSSN 173
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPPSMQQXXXXXXXXXXXXXXX 362
RFFQH+N Y QQ ERP FPQGS+ +N AVK T E P+MQQ
Sbjct: 174 RFFQHRN--YTQQTERPPFPQGSNPTNQALAVKQPTTAESPNMQQQQLQVQQPQQQQVNQ 231
Query: 363 XLS-----SLANR--TASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
+ L N+ A+PLPQG SRYFIVKSCNRENLE+SVQQGVWAT
Sbjct: 232 TQTQNIPDGLPNQGNKAAPLPQGLSRYFIVKSCNRENLELSVQQGVWAT 280
>ref|XP_020109599.1| zinc finger CCCH domain-containing protein 45 isoform X2 [Ananas
comosus]
Length = 710
Score = 224 bits (571), Expect = 1e-66
Identities = 113/176 (64%), Positives = 121/176 (68%), Gaps = 14/176 (7%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYK+GFCPNG DCRYRH KL GPPP VEEVFQKIQ LSSF YGS N
Sbjct: 126 CVYKHTNEDIKECNMYKMGFCPNGADCRYRHAKLPGPPPPVEEVFQKIQQLSSFGYGSSN 185
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPPSMQQ--------------X 320
RFFQH+N YNQQ ERPQ PQG V+N +A K T E ++QQ
Sbjct: 186 RFFQHRNNNYNQQGERPQLPQGPEVANQNTAAKQ-PTAEQSNVQQPQTQNQQSQQQQQPQ 244
Query: 321 XXXXXXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
L + A RTASPLPQGQSRYFIVKSCNRENLEISVQQG+WAT
Sbjct: 245 QQQTTENQAQSVPNGLPNQATRTASPLPQGQSRYFIVKSCNRENLEISVQQGIWAT 300
>ref|XP_020109598.1| zinc finger CCCH domain-containing protein 45 isoform X1 [Ananas
comosus]
Length = 715
Score = 224 bits (571), Expect = 2e-66
Identities = 113/176 (64%), Positives = 121/176 (68%), Gaps = 14/176 (7%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYK+GFCPNG DCRYRH KL GPPP VEEVFQKIQ LSSF YGS N
Sbjct: 126 CVYKHTNEDIKECNMYKMGFCPNGADCRYRHAKLPGPPPPVEEVFQKIQQLSSFGYGSSN 185
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPPSMQQ--------------X 320
RFFQH+N YNQQ ERPQ PQG V+N +A K T E ++QQ
Sbjct: 186 RFFQHRNNNYNQQGERPQLPQGPEVANQNTAAKQ-PTAEQSNVQQPQTQNQQSQQQQQPQ 244
Query: 321 XXXXXXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
L + A RTASPLPQGQSRYFIVKSCNRENLEISVQQG+WAT
Sbjct: 245 QQQTTENQAQSVPNGLPNQATRTASPLPQGQSRYFIVKSCNRENLEISVQQGIWAT 300
>ref|XP_016197709.1| 30-kDa cleavage and polyadenylation specificity factor 30 [Arachis
ipaensis]
Length = 696
Score = 222 bits (566), Expect = 6e-66
Identities = 106/166 (63%), Positives = 123/166 (74%), Gaps = 4/166 (2%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH K +GPPPSV+EV QKIQHL S+NY + N
Sbjct: 122 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSAGPPPSVDEVLQKIQHLYSYNYNASN 181
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPL----GTVEPPSMQQXXXXXXXXXXX 350
+FFQ + + YNQQAE+ QFPQG++ +N A KPL G V+ +QQ
Sbjct: 182 KFFQQRGSNYNQQAEKSQFPQGNNSTNQAVAGKPLQAESGNVQQQQVQQAQQPVNQSQVQ 241
Query: 351 XXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
+ AN+TA+PLPQG SRYFIVKSCNRENLE+SVQQGVWAT
Sbjct: 242 NVASGQPNQANKTATPLPQGISRYFIVKSCNRENLELSVQQGVWAT 287
>ref|XP_015959242.1| LOW QUALITY PROTEIN: 30-kDa cleavage and polyadenylation
specificity factor 30 [Arachis duranensis]
Length = 700
Score = 222 bits (566), Expect = 7e-66
Identities = 106/166 (63%), Positives = 123/166 (74%), Gaps = 4/166 (2%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH K +GPPPSV+EV QKIQHL S+NY + N
Sbjct: 122 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSAGPPPSVDEVLQKIQHLYSYNYNASN 181
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPL----GTVEPPSMQQXXXXXXXXXXX 350
+FFQ + + YNQQAE+ QFPQG++ +N A KPL G V+ +QQ
Sbjct: 182 KFFQQRGSNYNQQAEKSQFPQGNNSTNQAVAGKPLQAESGNVQQQQVQQAQQPVNQSQVQ 241
Query: 351 XXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
+ AN+TA+PLPQG SRYFIVKSCNRENLE+SVQQGVWAT
Sbjct: 242 NVASGQPNQANKTATPLPQGISRYFIVKSCNRENLELSVQQGVWAT 287
>ref|XP_020588276.1| zinc finger CCCH domain-containing protein 45 [Phalaenopsis
equestris]
Length = 713
Score = 222 bits (566), Expect = 8e-66
Identities = 114/184 (61%), Positives = 123/184 (66%), Gaps = 22/184 (11%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYK GFCPNGP+CRYRH KL GPPP VEEVFQKIQ L FNYGS N
Sbjct: 115 CVYKHTNEDIKECNMYKFGFCPNGPECRYRHAKLPGPPPPVEEVFQKIQQL--FNYGSSN 172
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEP-------------------- 302
RFFQH+NTGYNQQ E+ Q PQGS+V+N + +K G+VEP
Sbjct: 173 RFFQHRNTGYNQQMEKSQLPQGSAVTNQSAELKSPGSVEPLISQRQPQGQQSQQQETSQL 232
Query: 303 --PSMQQXXXXXXXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQG 476
S Q L + NRTASPLP GQSRYFIVKSCNRENLEISVQQG
Sbjct: 233 QQQSHQLQQQNCSENQVQSITNGLPNQPNRTASPLPPGQSRYFIVKSCNRENLEISVQQG 292
Query: 477 VWAT 488
VWAT
Sbjct: 293 VWAT 296
>ref|XP_014617341.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like isoform X2 [Glycine max]
Length = 375
Score = 214 bits (544), Expect = 1e-65
Identities = 105/167 (62%), Positives = 117/167 (70%), Gaps = 5/167 (2%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH K GPPP VEEV QKIQHL S+NY S N
Sbjct: 117 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSN 176
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKP----LGTVEP-PSMQQXXXXXXXXXX 347
+FFQ + YNQQAE+P PQG++ +N P LG +P +QQ
Sbjct: 177 KFFQQRGASYNQQAEKPLLPQGNNSTNQGVTGNPLPAELGNAQPQQQVQQSQQQVNQSQM 236
Query: 348 XXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
+ ANRTA+PLPQG SRYFIVKSCNRENLE+SVQQGVWAT
Sbjct: 237 QNVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWAT 283
>gb|KHN14347.1| Cleavage and polyadenylation specificity factor CPSF30 [Glycine
soja]
Length = 608
Score = 218 bits (556), Expect = 4e-65
Identities = 107/167 (64%), Positives = 119/167 (71%), Gaps = 5/167 (2%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH K GPPP VEEV QKIQHL S+NY S N
Sbjct: 34 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNSSN 93
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPL----GTVEP-PSMQQXXXXXXXXXX 347
+FFQ + YNQQAE+PQ PQG++ +N KPL G +P +QQ
Sbjct: 94 KFFQQRGASYNQQAEKPQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQSQQQVNQSQM 153
Query: 348 XXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
+ ANRTA+PLPQG SRYFIVKSCNRENLE+SVQQGVWAT
Sbjct: 154 QNVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWAT 200
>ref|XP_003546247.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Glycine max]
gb|KRH11760.1| hypothetical protein GLYMA_15G128500 [Glycine max]
Length = 691
Score = 218 bits (556), Expect = 2e-64
Identities = 107/167 (64%), Positives = 119/167 (71%), Gaps = 5/167 (2%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH K GPPP VEEV QKIQHL S+NY S N
Sbjct: 117 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNSSN 176
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPL----GTVEP-PSMQQXXXXXXXXXX 347
+FFQ + YNQQAE+PQ PQG++ +N KPL G +P +QQ
Sbjct: 177 KFFQQRGASYNQQAEKPQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQSQQQVNQSQM 236
Query: 348 XXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
+ ANRTA+PLPQG SRYFIVKSCNRENLE+SVQQGVWAT
Sbjct: 237 QNVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWAT 283
>ref|XP_006846022.1| 30-kDa cleavage and polyadenylation specificity factor 30
[Amborella trichopoda]
gb|ERN07697.1| hypothetical protein AMTR_s00155p00079840 [Amborella trichopoda]
Length = 701
Score = 218 bits (556), Expect = 2e-64
Identities = 108/172 (62%), Positives = 121/172 (70%), Gaps = 10/172 (5%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHL-SSFNYGSG 179
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KL GPPP VEE+FQKIQ L SSFN GS
Sbjct: 108 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEIFQKIQQLSSSFNQGSS 167
Query: 180 NRFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPPSMQQXXXXXXXXXXXXXX 359
NRFFQH+NTGY Q ++ Q QGS+V N +A+KP TV+ QQ
Sbjct: 168 NRFFQHRNTGYVPQVDKNQMQQGSAVVNQGAALKPSATVDSSGSQQQQQQIQQPQQNASP 227
Query: 360 XXLSSLAN---------RTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
+ S+ N ASPLPQGQSRYFIVKSCNRENLE+SVQ+G+WAT
Sbjct: 228 NQMQSMPNGLLNPINRVSAASPLPQGQSRYFIVKSCNRENLELSVQKGIWAT 279
>ref|XP_010241185.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Nelumbo nucifera]
Length = 715
Score = 218 bits (556), Expect = 2e-64
Identities = 110/173 (63%), Positives = 118/173 (68%), Gaps = 11/173 (6%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYK GFCPNGPDCRYRH K GPPP VEEVFQKIQHL SFNYGS N
Sbjct: 109 CVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKQPGPPPPVEEVFQKIQHLGSFNYGSSN 168
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEPPSMQ-----------QXXXX 329
RFFQ + Y Q+ER QFPQGSS N A KP E P++Q Q
Sbjct: 169 RFFQQRIGSYVPQSERSQFPQGSSNVNQGIASKPSTAAESPNVQQQQQQSQIQQPQQQQQ 228
Query: 330 XXXXXXXXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
L + A+RTA+PLPQG SRYFIVKSCNRENLE+SVQQGVWAT
Sbjct: 229 VNQTQMQNPQNGLPNQASRTATPLPQGSSRYFIVKSCNRENLELSVQQGVWAT 281
>gb|KYP39096.1| Cleavage and polyadenylation specificity factor CPSF30 [Cajanus
cajan]
Length = 648
Score = 216 bits (549), Expect = 9e-64
Identities = 106/167 (63%), Positives = 119/167 (71%), Gaps = 5/167 (2%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH K GPPP VEEV QKIQHL S+NY S N
Sbjct: 93 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSN 152
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPL----GTVEP-PSMQQXXXXXXXXXX 347
+FFQ + + YNQQAE+ Q PQG++ +N KPL G +P +QQ
Sbjct: 153 KFFQQRGSNYNQQAEKSQLPQGNNSTNQGVTGKPLPAESGNAQPQQQVQQSQQPVSQSQM 212
Query: 348 XXXXXXLSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQGVWAT 488
+ ANRTA+PLPQG SRYFIVKSCNRENLE+SVQQGVWAT
Sbjct: 213 QNPANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWAT 259
>ref|XP_020686552.1| zinc finger CCCH domain-containing protein 45 isoform X2
[Dendrobium catenatum]
Length = 684
Score = 216 bits (550), Expect = 1e-63
Identities = 113/185 (61%), Positives = 123/185 (66%), Gaps = 23/185 (12%)
Frame = +3
Query: 3 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLSGPPPSVEEVFQKIQHLSSFNYGSGN 182
CVYKHTNEDIKECNMYK GFCPNGPDCRYRH KL GPPP VEEVFQKIQ L FNYGS +
Sbjct: 115 CVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQQL--FNYGSSS 172
Query: 183 RFFQHKNTGYNQQAERPQFPQGSSVSNHPSAVKPLGTVEP-----------------PSM 311
RFFQH+N+GYNQQ E+ Q QGS+V+N + K G+VEP P
Sbjct: 173 RFFQHRNSGYNQQMEKSQLLQGSAVTNQSAEPKAPGSVEPLVSQQQPQDQQSQQQQEPPQ 232
Query: 312 QQXXXXXXXXXXXXXXXX------LSSLANRTASPLPQGQSRYFIVKSCNRENLEISVQQ 473
QQ L + +NRTASPLP GQSRYFIVKSCNRENLEISVQQ
Sbjct: 233 QQRHPHQLQQQNYSENQVQSITNGLPNQSNRTASPLPPGQSRYFIVKSCNRENLEISVQQ 292
Query: 474 GVWAT 488
GVWAT
Sbjct: 293 GVWAT 297