BLASTX nr result

ID: Ophiopogon27_contig00008427 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00008427
         (606 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276963.1| CRM-domain containing factor CFM2, chloropla...   110   3e-24
ref|XP_020276961.1| CRM-domain containing factor CFM2, chloropla...   110   3e-24
ref|XP_020276960.1| CRM-domain containing factor CFM2, chloropla...   110   3e-24
ref|XP_020276962.1| CRM-domain containing factor CFM2, chloropla...   107   2e-23
gb|EJY85578.1| P-type ATPase (macronuclear) [Oxytricha trifallax]      58   3e-06
gb|EJY77364.1| P-type ATPase (macronuclear) [Oxytricha trifallax]      58   3e-06
ref|WP_088639999.1| hypothetical protein [Fibrobacter sp. UWB4] ...    57   5e-06
emb|SGZ52897.1| CIC11C00000004150 [[Candida] intermedia]               57   6e-06

>ref|XP_020276963.1| CRM-domain containing factor CFM2, chloroplastic isoform X4
           [Asparagus officinalis]
          Length = 817

 Score =  110 bits (274), Expect = 3e-24
 Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 15/146 (10%)
 Frame = +1

Query: 133 HQENTETKEHIAVGSMQLTESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVAT 312
           H  +   KE      MQLTES+K ++ DE  + SWS+ RD+ SA SS  Q++TEEVN A 
Sbjct: 484 HLRDQMAKEQAVEDEMQLTESDKLDIDDERIEHSWSVERDHVSAGSSHEQQSTEEVNEAA 543

Query: 313 AEYLHSSNHGSVPDDEEESTITSNN------------DNWVALKQADERSKNEDVQL--- 447
            EYLH +    V ++EE ST+TSNN            +NW+ALK  D+ SKNE+V+    
Sbjct: 544 EEYLHLNKSDCVLNEEESSTVTSNNAINSIFSLNHSQENWLALKHVDQFSKNENVRFDSE 603

Query: 448 ATESANMADSDSRYISDESEFLPEFC 525
           +T S NM++ +    S+E  F PE C
Sbjct: 604 STTSTNMSNKEKGCSSNEPGFYPESC 629


>ref|XP_020276961.1| CRM-domain containing factor CFM2, chloroplastic isoform X2
            [Asparagus officinalis]
          Length = 988

 Score =  110 bits (274), Expect = 3e-24
 Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 15/146 (10%)
 Frame = +1

Query: 133  HQENTETKEHIAVGSMQLTESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVAT 312
            H  +   KE      MQLTES+K ++ DE  + SWS+ RD+ SA SS  Q++TEEVN A 
Sbjct: 655  HLRDQMAKEQAVEDEMQLTESDKLDIDDERIEHSWSVERDHVSAGSSHEQQSTEEVNEAA 714

Query: 313  AEYLHSSNHGSVPDDEEESTITSNN------------DNWVALKQADERSKNEDVQL--- 447
             EYLH +    V ++EE ST+TSNN            +NW+ALK  D+ SKNE+V+    
Sbjct: 715  EEYLHLNKSDCVLNEEESSTVTSNNAINSIFSLNHSQENWLALKHVDQFSKNENVRFDSE 774

Query: 448  ATESANMADSDSRYISDESEFLPEFC 525
            +T S NM++ +    S+E  F PE C
Sbjct: 775  STTSTNMSNKEKGCSSNEPGFYPESC 800


>ref|XP_020276960.1| CRM-domain containing factor CFM2, chloroplastic isoform X1
            [Asparagus officinalis]
 gb|ONK59523.1| uncharacterized protein A4U43_C08F7300 [Asparagus officinalis]
          Length = 1015

 Score =  110 bits (274), Expect = 3e-24
 Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 15/146 (10%)
 Frame = +1

Query: 133  HQENTETKEHIAVGSMQLTESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVAT 312
            H  +   KE      MQLTES+K ++ DE  + SWS+ RD+ SA SS  Q++TEEVN A 
Sbjct: 682  HLRDQMAKEQAVEDEMQLTESDKLDIDDERIEHSWSVERDHVSAGSSHEQQSTEEVNEAA 741

Query: 313  AEYLHSSNHGSVPDDEEESTITSNN------------DNWVALKQADERSKNEDVQL--- 447
             EYLH +    V ++EE ST+TSNN            +NW+ALK  D+ SKNE+V+    
Sbjct: 742  EEYLHLNKSDCVLNEEESSTVTSNNAINSIFSLNHSQENWLALKHVDQFSKNENVRFDSE 801

Query: 448  ATESANMADSDSRYISDESEFLPEFC 525
            +T S NM++ +    S+E  F PE C
Sbjct: 802  STTSTNMSNKEKGCSSNEPGFYPESC 827


>ref|XP_020276962.1| CRM-domain containing factor CFM2, chloroplastic isoform X3
            [Asparagus officinalis]
          Length = 840

 Score =  107 bits (267), Expect = 2e-23
 Identities = 61/144 (42%), Positives = 84/144 (58%), Gaps = 15/144 (10%)
 Frame = +1

Query: 133  HQENTETKEHIAVGSMQLTESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVAT 312
            H  +   KE      MQLTES+K ++ DE  + SWS+ RD+ SA SS  Q++TEEVN A 
Sbjct: 682  HLRDQMAKEQAVEDEMQLTESDKLDIDDERIEHSWSVERDHVSAGSSHEQQSTEEVNEAA 741

Query: 313  AEYLHSSNHGSVPDDEEESTITSNN------------DNWVALKQADERSKNEDVQL--- 447
             EYLH +    V ++EE ST+TSNN            +NW+ALK  D+ SKNE+V+    
Sbjct: 742  EEYLHLNKSDCVLNEEESSTVTSNNAINSIFSLNHSQENWLALKHVDQFSKNENVRFDSE 801

Query: 448  ATESANMADSDSRYISDESEFLPE 519
            +T S NM++ +    S+E  F PE
Sbjct: 802  STTSTNMSNKEKGCSSNEPGFYPE 825


>gb|EJY85578.1| P-type ATPase (macronuclear) [Oxytricha trifallax]
          Length = 2278

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
 Frame = +1

Query: 46  ESNKSEVEDTMNEQSRSIERHNGSAESSYHQENTETKEHIAVGSMQLTESNKSEVKDEMN 225
           ESN+ + E+   E+    ++ +G +ESS    +++T+        ++T  NKS VK+ ++
Sbjct: 332 ESNQDDNEEDSEEE----DQEDGKSESSSKHNSSKTEN----SEQEVTSHNKSNVKNTIS 383

Query: 226 DRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDD-EEESTITSNNDNWVA 402
            +S S  + + S  SS  + + +E+N +     H+S   S  D  +E S  T N+ N+VA
Sbjct: 384 KQSHSNSQSSNSKSSSDKENDEDELNSS-----HTSQQDSKSDSVQEPSHQTINSQNYVA 438

Query: 403 LKQADERSKNEDVQLATESANMADSDSRYISDESE 507
           ++    R+K+ ++    +  N ++S S   SDE E
Sbjct: 439 IRNPQSRTKDIEIHQNNDQVNDSNS-SHSQSDEEE 472


>gb|EJY77364.1| P-type ATPase (macronuclear) [Oxytricha trifallax]
          Length = 2280

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
 Frame = +1

Query: 46  ESNKSEVEDTMNEQSRSIERHNGSAESSYHQENTETKEHIAVGSMQLTESNKSEVKDEMN 225
           ESN+ + E+   E+    ++ +G +ESS    +++T+        ++T  NKS VK+ ++
Sbjct: 334 ESNQDDNEEDSEEE----DQEDGKSESSSKHNSSKTEN----SEQEVTSHNKSNVKNTIS 385

Query: 226 DRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDD-EEESTITSNNDNWVA 402
            +S S  + + S  SS  + + +E+N +     H+S   S  D  +E S  T N+ N+VA
Sbjct: 386 KQSHSNSQSSNSKSSSDKENDEDELNSS-----HTSQQDSKSDSVQEPSHQTINSQNYVA 440

Query: 403 LKQADERSKNEDVQLATESANMADSDSRYISDESE 507
           ++    R+K+ ++    +  N ++S S   SDE E
Sbjct: 441 IRNPQSRTKDIEIHQNNDQVNDSNS-SHSQSDEEE 474


>ref|WP_088639999.1| hypothetical protein [Fibrobacter sp. UWB4]
 gb|OWV18694.1| hypothetical protein B7990_05320 [Fibrobacter sp. UWB4]
          Length = 670

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 49/179 (27%), Positives = 85/179 (47%)
 Frame = +1

Query: 7   VKEHSTVDKMRLIESNKSEVEDTMNEQSRSIERHNGSAESSYHQENTETKEHIAVGSMQL 186
           V   S+ +    +ES+ SEV  +  E S S E  + SAESS  +E     E+I + S   
Sbjct: 226 VVSSSSEESSSSVESSSSEVSSSSVESSSS-EESSSSAESSSSEE-----EYIVITSSYN 279

Query: 187 TESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEE 366
            +S+ SE +   ++ S S    + S ESS  +E++     +++E   SS   S     EE
Sbjct: 280 PDSSSSE-ESSSSEESSSSEESSSSEESSSSEESSSSEESSSSEESSSSEESS---SSEE 335

Query: 367 STITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESEFLPEFCLVPNDG 543
           S+ +  + +      ++E S +E+   + ES++  +S S   S  SE +   C+   +G
Sbjct: 336 SSSSEESSSSEESSSSEESSSSEESSSSEESSSSEESSSSVESSSSEIVVSACIEFKNG 394


>emb|SGZ52897.1| CIC11C00000004150 [[Candida] intermedia]
          Length = 2482

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
 Frame = +1

Query: 10  KEHSTVDKMRLIESNKSEVEDTMNEQSRSIERHNGSAESSYHQENTETKEHIAVGSMQLT 189
           +E S+ ++    E + S  E +  EQS S E  + + ESS  ++++ T+E  +      T
Sbjct: 373 EESSSTEESSSTEESSSTQESSSTEQSSSTEESSSTEESSSTEQSSSTEESSSTEESSST 432

Query: 190 ESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDE--- 360
           E + S  +    + S S    + + ESS  QE++     ++ E   S+   S  ++    
Sbjct: 433 EESSSTEESSSTEESSSTEESSSTEESSSTQESSSTQESSSTEQSSSTEESSSTEESSST 492

Query: 361 EESTITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESE 507
           EES+ T  + +       +E S  E      ES++   S S   S  +E
Sbjct: 493 EESSSTEQSSSTEESSSTEESSSTEQSSSTEESSSTEQSSSTEESSSTE 541



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 40/166 (24%), Positives = 75/166 (45%)
 Frame = +1

Query: 10  KEHSTVDKMRLIESNKSEVEDTMNEQSRSIERHNGSAESSYHQENTETKEHIAVGSMQLT 189
           +E S+ ++    E + S  E +  EQS S E  + + ESS  QE++ T+E  +      T
Sbjct: 505 EESSSTEESSSTEQSSSTEESSSTEQSSSTEESSSTEESSSTQESSSTQESSSTEQSSST 564

Query: 190 ESNKSEVKDEMNDRSWSIVRDNGSAESSFHQENTEEVNVATAEYLHSSNHGSVPDDEEES 369
           E + S  +    ++S S    + + ESS  ++++     ++ E   S+   S     EES
Sbjct: 565 EESSSTEESSSTEQSSSTEESSSTEESSSTEQSSSTEESSSTEQSSSTEESS---STEES 621

Query: 370 TITSNNDNWVALKQADERSKNEDVQLATESANMADSDSRYISDESE 507
           + T  + +       ++ S  E+     ES++  +S S   S  +E
Sbjct: 622 SSTQESSSTQESSSTEQSSSTEESSSTEESSSTQESSSTEQSSSTE 667


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