BLASTX nr result

ID: Ophiopogon27_contig00008349 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00008349
         (387 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAS94399.1| Os05g0459900 [Oryza sativa Japonica Group]             50   6e-06

>dbj|BAS94399.1| Os05g0459900 [Oryza sativa Japonica Group]
          Length = 52

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -3

Query: 385 GLNKGHVVTKRELPLRPSSRKGVCAEDCISGRATTSR 275
           G+NKGHVVTKRELP RPS RKGV A D ++ RA ++R
Sbjct: 13  GINKGHVVTKRELPPRPSDRKGVSASDPVA-RAVSAR 48