BLASTX nr result

ID: Ophiopogon27_contig00008276 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00008276
         (715 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK74554.1| uncharacterized protein A4U43_C03F7600 [Asparagus...   194   3e-53
ref|XP_020256371.1| LOW QUALITY PROTEIN: protein CROWDED NUCLEI ...   194   3e-53

>gb|ONK74554.1| uncharacterized protein A4U43_C03F7600 [Asparagus officinalis]
          Length = 1047

 Score =  194 bits (494), Expect = 3e-53
 Identities = 119/239 (49%), Positives = 149/239 (62%), Gaps = 24/239 (10%)
 Frame = +1

Query: 67   CINTSVRALSVDKQHEQKFPADGGSDSVLHSEKPSVNASPPLSVTVSLVKKYARTIFGRS 246
            C +TS   LS+D + EQKF A GGS S L  +K S  +SP L  T+S+VKKYAR IFGRS
Sbjct: 766  CTSTSAGDLSIDMEQEQKFSAHGGSGSKLLPDKSSDESSPRLLATMSMVKKYARAIFGRS 825

Query: 247  PEK-VGASSESNVA----------------------RMPVRFNLEDTDVRSCIPEIEHKS 357
            PEK VGA+SE NV                       ++ +  N+E       IPEIEHKS
Sbjct: 826  PEKLVGANSERNVKGRASTKSGGGSAGKENGSNLFKKLSLERNVE------IIPEIEHKS 879

Query: 358  GADMVITRLKEDGANDMSKENPGTTVDGTTMLFNCRKRLNDSMANEYLGLNLNQTQQKKA 537
            GAD VIT+LKEDGAN MS+ENP T V+G   L N +KR NDS++ ++L  +LNQ QQKKA
Sbjct: 880  GADKVITQLKEDGANGMSEENPSTVVNGQQKLRNRKKRHNDSLSTDHLEADLNQKQQKKA 939

Query: 538  RQNGSDAAEEKSLLCILDNGKSHVSETSSHVGNAALLSTSCYG-KEKTQEQETGSAFLE 711
            +Q+G+D  EE S + IL+NG S +SE  S   N   L+  C+G +   QEQE GSAFLE
Sbjct: 940  KQSGNDMLEENSSVRILNNGNSRISENPSPSSN---LTPPCHGYQNAAQEQENGSAFLE 995


>ref|XP_020256371.1| LOW QUALITY PROTEIN: protein CROWDED NUCLEI 4-like [Asparagus
            officinalis]
          Length = 1055

 Score =  194 bits (494), Expect = 3e-53
 Identities = 119/239 (49%), Positives = 149/239 (62%), Gaps = 24/239 (10%)
 Frame = +1

Query: 67   CINTSVRALSVDKQHEQKFPADGGSDSVLHSEKPSVNASPPLSVTVSLVKKYARTIFGRS 246
            C +TS   LS+D + EQKF A GGS S L  +K S  +SP L  T+S+VKKYAR IFGRS
Sbjct: 774  CTSTSAGDLSIDMEQEQKFSAHGGSGSKLLPDKSSDESSPRLLATMSMVKKYARAIFGRS 833

Query: 247  PEK-VGASSESNVA----------------------RMPVRFNLEDTDVRSCIPEIEHKS 357
            PEK VGA+SE NV                       ++ +  N+E       IPEIEHKS
Sbjct: 834  PEKLVGANSERNVKGRASTKSGGGSAGKENGSNLFKKLSLERNVE------IIPEIEHKS 887

Query: 358  GADMVITRLKEDGANDMSKENPGTTVDGTTMLFNCRKRLNDSMANEYLGLNLNQTQQKKA 537
            GAD VIT+LKEDGAN MS+ENP T V+G   L N +KR NDS++ ++L  +LNQ QQKKA
Sbjct: 888  GADKVITQLKEDGANGMSEENPSTVVNGQQKLRNRKKRHNDSLSTDHLEADLNQKQQKKA 947

Query: 538  RQNGSDAAEEKSLLCILDNGKSHVSETSSHVGNAALLSTSCYG-KEKTQEQETGSAFLE 711
            +Q+G+D  EE S + IL+NG S +SE  S   N   L+  C+G +   QEQE GSAFLE
Sbjct: 948  KQSGNDMLEENSSVRILNNGNSRISENPSPSSN---LTPPCHGYQNAAQEQENGSAFLE 1003


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