BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00008238
         (2839 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020250528.1| DNA-directed RNA polymerase 1B, mitochondria...  1562   0.0  
ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1467   0.0  
ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1456   0.0  
ref|XP_020109467.1| DNA-directed RNA polymerase 1B, mitochondria...  1444   0.0  
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1411   0.0  
ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1399   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1384   0.0  
gb|PAN11641.1| hypothetical protein PAHAL_B02160 [Panicum hallii]    1380   0.0  
ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1380   0.0  
ref|XP_015612355.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1379   0.0  
ref|XP_015612354.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1379   0.0  
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...  1379   0.0  
ref|XP_006660444.2| PREDICTED: DNA-directed RNA polymerase 1B, m...  1379   0.0  
ref|XP_009394557.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1375   0.0  
ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1373   0.0  
ref|XP_002461035.2| DNA-directed RNA polymerase 1B, mitochondria...  1372   0.0  
gb|OQU90275.1| hypothetical protein SORBI_3002G378100 [Sorghum b...  1372   0.0  
ref|XP_022149021.1| DNA-directed RNA polymerase 1B, mitochondria...  1372   0.0  
ref|XP_004956403.1| DNA-directed RNA polymerase 1B, mitochondria...  1367   0.0  
gb|OVA15329.1| DNA-directed RNA polymerase [Macleaya cordata]        1365   0.0  

>ref|XP_020250528.1| DNA-directed RNA polymerase 1B, mitochondrial-like [Asparagus
            officinalis]
 gb|ONK55019.1| uncharacterized protein A4U43_UnF8500 [Asparagus officinalis]
          Length = 1023

 Score = 1562 bits (4045), Expect = 0.0
 Identities = 766/933 (82%), Positives = 831/933 (89%), Gaps = 10/933 (1%)
 Frame = +1

Query: 70   PTPTHLGTRQNLEFC-------PNSGSISRGFTGIRSFXXXXXXXXXXXX---TDADEAA 219
            P  T +G  Q +EF        P +  + R FTG RSF               TDADEAA
Sbjct: 79   PIFTLIGNPQKVEFSTFDGILKPLAREVPRFFTGTRSFASVAEAEVEVEAASSTDADEAA 138

Query: 220  EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAMLKRRQIKIETE 399
            E+QE+LEEL  VQV + +  A+ N NR +RN  +TQHRPLGMG GKYA+L+RRQIKIETE
Sbjct: 139  EIQEILEELSKVQVSTSNNAASENTNR-KRNFEKTQHRPLGMGTGKYAILRRRQIKIETE 197

Query: 400  AWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHR 579
            AWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPF+D I+KE+++C DPKCK SHR
Sbjct: 198  AWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFRDAILKERKICEDPKCKASHR 257

Query: 580  QYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKK 759
             YF+KLPA+MMAVITMHKLMSLLMTG GDGSVRVVQAAC VGEAIEQEVRIH+FLEKTKK
Sbjct: 258  AYFNKLPADMMAVITMHKLMSLLMTGVGDGSVRVVQAACHVGEAIEQEVRIHRFLEKTKK 317

Query: 760  RPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKV 939
            +P K   N D E DS AKEQE +RKKVTNLMKM+KLHQVRKIVKGQDD RPWGQEAQAKV
Sbjct: 318  KPAKASDNGDGEVDSSAKEQEIIRKKVTNLMKMHKLHQVRKIVKGQDDCRPWGQEAQAKV 377

Query: 940  GSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDLLVR 1119
            GSRLIELLM+TAYIQPPVDQ+A+GPPDIRPAFRH+LRT+TKE  K+SRRYGVIECD +VR
Sbjct: 378  GSRLIELLMDTAYIQPPVDQKAEGPPDIRPAFRHSLRTVTKEHHKMSRRYGVIECDPIVR 437

Query: 1120 QGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQL 1299
            QGLD+TARHMVIPY+PMLVPP+ WTGYD+G H FLPSYVMR+HG+RQQREAVKRAPKKQL
Sbjct: 438  QGLDRTARHMVIPYVPMLVPPINWTGYDKGGHLFLPSYVMRIHGARQQREAVKRAPKKQL 497

Query: 1300 QAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQXXX 1479
            QAVFEALD +GST+WR+NKRVLS+VDRIWSSGGRLADL+DR+DIPLPEKP TEDES+   
Sbjct: 498  QAVFEALDAVGSTRWRINKRVLSIVDRIWSSGGRLADLVDRDDIPLPEKPDTEDESKIKK 557

Query: 1480 XXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHL 1659
                      ENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL+HL
Sbjct: 558  WKWKLRSAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHL 617

Query: 1660 SSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSA 1839
             SDLCRG+LEFAEGRPLGKSGLRWLKIHL GLYGGGVDKLSYDGRIAFTENH+EDIFDSA
Sbjct: 618  GSDLCRGVLEFAEGRPLGKSGLRWLKIHLAGLYGGGVDKLSYDGRIAFTENHVEDIFDSA 677

Query: 1840 DRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDGSCNGLQHYAALG 2019
            DRPLEGRRWWLGAEDPFQCL VCINLAEALRSSSP+TTISH PVHQDGSCNGLQHYAALG
Sbjct: 678  DRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHVPVHQDGSCNGLQHYAALG 737

Query: 2020 RDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVDRKL 2199
            RD++GA AVNLV G+KP DVYSGIAARVLDIM++DAAKDPA EP+ALRAKLL+  VDRKL
Sbjct: 738  RDQLGAVAVNLVTGEKPADVYSGIAARVLDIMQQDAAKDPAKEPDALRAKLLVDHVDRKL 797

Query: 2200 VKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQGAR 2379
            VKQTVMTSVYGVTYVGAREQIK+RLKERGAI DE+ELFSASCY AKTTLIALE+MFQ AR
Sbjct: 798  VKQTVMTSVYGVTYVGAREQIKRRLKERGAIADEAELFSASCYAAKTTLIALEQMFQAAR 857

Query: 2380 NIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMV 2559
            NIMNWLGDCAK+IASENQPVRWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETDKV+V
Sbjct: 858  NIMNWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVLV 917

Query: 2560 KRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACDVDQLNVILREKFV 2739
            KRQ+TAFPPNFVHSLDSSHMMMTAVAC  AGLNFAGVHDSYWTHACDVDQ+N+ILREKFV
Sbjct: 918  KRQRTAFPPNFVHSLDSSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDQMNIILREKFV 977

Query: 2740 ELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            ELYE PILENLLESFQKSFPTL FPPLPERG +
Sbjct: 978  ELYETPILENLLESFQKSFPTLNFPPLPERGDF 1010


>ref|XP_008783046.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Phoenix dactylifera]
          Length = 1038

 Score = 1467 bits (3798), Expect = 0.0
 Identities = 718/885 (81%), Positives = 786/885 (88%), Gaps = 5/885 (0%)
 Frame = +1

Query: 199  TDADEAA----EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPL-GMGAGKYA 363
            TD DE      E+Q MLEE+  + V   S    GN   VR      Q R + GMG+GKYA
Sbjct: 142  TDVDEDTSSIEEIQGMLEEMSKIDVREGSKIG-GNLEEVRPKQQLGQPRMVCGMGSGKYA 200

Query: 364  MLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQ 543
            +L+RRQI+IETEAWEQAAKEYKELL DMCE+KLAPNLPYVKSLFLGWFEP +D+I  EQ+
Sbjct: 201  ILRRRQIRIETEAWEQAAKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQE 260

Query: 544  LCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQE 723
             C DP+ ++SH  YF +LPA+MMAVITMHKLMSLLMTG GDG +RVVQAACQ+GEAIE E
Sbjct: 261  QCRDPRTRVSHGPYFYQLPADMMAVITMHKLMSLLMTGNGDGGIRVVQAACQIGEAIEHE 320

Query: 724  VRIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDD 903
            VRIH+FLEKT+K+  KDKKNED E  ++ KEQEFLRKKVTNLMK  K+HQVRKIVKGQDD
Sbjct: 321  VRIHRFLEKTRKKTDKDKKNEDVEGATLTKEQEFLRKKVTNLMKKQKVHQVRKIVKGQDD 380

Query: 904  SRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSR 1083
            S+PWGQ+AQAKVGSRLIELLMETAYIQPPV Q ADGPPDIRPAFRH+LRT+TKEQQK SR
Sbjct: 381  SKPWGQDAQAKVGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHSR 440

Query: 1084 RYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQ 1263
            RYGVIECD LVRQGLD+TARHMVIPYMPMLVPP+ WTGY++G H FLPSY+MR HG+RQQ
Sbjct: 441  RYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVNWTGYEKGGHLFLPSYIMRTHGARQQ 500

Query: 1264 REAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPE 1443
            REAV+RAP+K++QAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADL+DR+DIPLPE
Sbjct: 501  REAVRRAPRKEMQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLVDRDDIPLPE 560

Query: 1444 KPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRG 1623
            KP TED ++             ENSE+HSQRCDVELKLAVARKMKDEEGFYYPHNLDFRG
Sbjct: 561  KPDTEDGAEIRKWKWKVKSVKKENSEKHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRG 620

Query: 1624 RAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAF 1803
            RAYPMHPYL+HL SDLCRGILEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSYDGR+AF
Sbjct: 621  RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRVAF 680

Query: 1804 TENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDG 1983
            TENH++DIFDSADRPLEGRRWWLGAEDPFQCL VCINL+EALRSSSP+TTISH PVHQDG
Sbjct: 681  TENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQDG 740

Query: 1984 SCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALR 2163
            SCNGLQHYAALGRD++GA AVNLV GDKP DVYS IAARVL+IM+RDA KDPAT+P+ALR
Sbjct: 741  SCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPATDPDALR 800

Query: 2164 AKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTT 2343
            A+LL++QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKERG I D++ELFSASCY AKTT
Sbjct: 801  ARLLVNQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFSASCYAAKTT 860

Query: 2344 LIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQV 2523
            L AL EMFQ AR+IM+WLGDCAK+IASENQPVRWTTPLGLPVVQPYR LGRHLIKTSLQV
Sbjct: 861  LTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRALGRHLIKTSLQV 920

Query: 2524 LTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACDV 2703
            LTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC  AGLNFAGVHDSYWTHACDV
Sbjct: 921  LTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDV 980

Query: 2704 DQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            DQ+N ILREKFVELYE PILENLLESFQ+SFPTL FPPLPERG Y
Sbjct: 981  DQMNWILREKFVELYETPILENLLESFQQSFPTLSFPPLPERGDY 1025


>ref|XP_010929072.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Elaeis guineensis]
          Length = 1038

 Score = 1456 bits (3768), Expect = 0.0
 Identities = 714/886 (80%), Positives = 786/886 (88%), Gaps = 6/886 (0%)
 Frame = +1

Query: 199  TDADEAA----EVQEMLEELKNVQVDSRSGYANGNN-NRVRRNLPRTQHRPL-GMGAGKY 360
            TD DE A    E+Q MLEE+   ++D+R G   G N   VR  +P  + R + GMG+GKY
Sbjct: 142  TDVDEDASSIEEIQGMLEEMS--KIDAREGSKIGGNLEEVRPKVPLEKPRMVPGMGSGKY 199

Query: 361  AMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQ 540
            A+L+RRQI+IETEAWEQAAKEYKELL DMCE+KLAPNLPYVKSLFLGWFEP +D+I  EQ
Sbjct: 200  AILRRRQIRIETEAWEQAAKEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDQIAAEQ 259

Query: 541  QLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQ 720
            + C DP  +LS+ +YF++LPA+MMAVITMHKLMSLLMTG G G +RVVQAACQ+GEAIE 
Sbjct: 260  EKCGDPGNRLSYGRYFNQLPADMMAVITMHKLMSLLMTGSGYGGIRVVQAACQIGEAIEH 319

Query: 721  EVRIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQD 900
            EVRIH+FLEKT+K+  KDKKNED E  ++AKEQEFLRKKVTNLMK  KL QVRKIV+GQD
Sbjct: 320  EVRIHRFLEKTRKKADKDKKNEDVEGATLAKEQEFLRKKVTNLMKKQKLRQVRKIVRGQD 379

Query: 901  DSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLS 1080
            DS+PWGQ+ QAKVGSRLIELLMETAYIQPPV Q ADGPPDIRPAFRH+LRT+TKEQQK S
Sbjct: 380  DSKPWGQDFQAKVGSRLIELLMETAYIQPPVSQSADGPPDIRPAFRHSLRTVTKEQQKHS 439

Query: 1081 RRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQ 1260
            RRYGVIECD LVRQGLD+TARHMVIPYMPMLVPP+ WTGYD+G H FLPSY+MR+HG+RQ
Sbjct: 440  RRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVHWTGYDKGGHLFLPSYIMRIHGARQ 499

Query: 1261 QREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLP 1440
            QREAVKRAP+ Q+QAVFEALDTLG+TKWR+NKRVLSVVDR+WS GGRLADL+DR+DIPLP
Sbjct: 500  QREAVKRAPRMQMQAVFEALDTLGTTKWRINKRVLSVVDRMWSGGGRLADLVDRDDIPLP 559

Query: 1441 EKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFR 1620
            EKP TEDE+              ENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFR
Sbjct: 560  EKPDTEDEATIRKWKWKVKSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFR 619

Query: 1621 GRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIA 1800
            GRAYPMHPYL+HL SDLCRGILEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSYDGR+A
Sbjct: 620  GRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRVA 679

Query: 1801 FTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQD 1980
            FTENH+++IFDSADRPLEGRRWWLGAEDPFQCL VCINL+EALRSSSP+TTISH PVHQD
Sbjct: 680  FTENHLDEIFDSADRPLEGRRWWLGAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQD 739

Query: 1981 GSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNAL 2160
            GSCNGLQHYAALGRD++GA AVNLV GDKP DVYS IAARVL+IM+RDA KDPA +PNAL
Sbjct: 740  GSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSEIAARVLEIMRRDAQKDPAIDPNAL 799

Query: 2161 RAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKT 2340
            RA+LL++QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKERG I D++ELF ASCY AKT
Sbjct: 800  RARLLVNQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVISDDTELFGASCYAAKT 859

Query: 2341 TLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQ 2520
            TL AL EMFQ AR+IM WLGDCAK+IASEN PVRWTTPLGLPVVQPYR LGRHLIKTSLQ
Sbjct: 860  TLTALGEMFQAARSIMGWLGDCAKIIASENHPVRWTTPLGLPVVQPYRALGRHLIKTSLQ 919

Query: 2521 VLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACD 2700
            VLTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC  AGLNFAGVHDSYWTHACD
Sbjct: 920  VLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKIAGLNFAGVHDSYWTHACD 979

Query: 2701 VDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            VDQLN ILREKFVELYE PILE+LLESFQ SFPTL+FPPLPERG +
Sbjct: 980  VDQLNRILREKFVELYETPILEDLLESFQHSFPTLRFPPLPERGDF 1025


>ref|XP_020109467.1| DNA-directed RNA polymerase 1B, mitochondrial-like [Ananas comosus]
          Length = 890

 Score = 1444 bits (3738), Expect = 0.0
 Identities = 703/847 (82%), Positives = 761/847 (89%)
 Frame = +1

Query: 298  RVRRNLPRTQHRPLGMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLP 477
            R   ++P    +  GMG+GKYAML+RRQIKIETEAWEQAAKEYKELL DMCE+KLAPNLP
Sbjct: 31   RTAVSVPARPKQVHGMGSGKYAMLRRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLP 90

Query: 478  YVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTG 657
            YVKSLFLGWFEP +D+I  EQ  C D K + SH  YF++LPA+MMAVITMHKLMSLLMTG
Sbjct: 91   YVKSLFLGWFEPLRDQIALEQDHCRDGKNRASHAPYFNQLPADMMAVITMHKLMSLLMTG 150

Query: 658  GGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKK 837
             GDGSVRVVQAACQVGEAIEQE RIHKFLEKT+KR  KDK NED E DSV KEQEFLRK+
Sbjct: 151  SGDGSVRVVQAACQVGEAIEQEARIHKFLEKTRKRAYKDKTNEDIEDDSVTKEQEFLRKR 210

Query: 838  VTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPP 1017
            VTNLMK  K+HQVR+IVK Q DS+PWGQ+AQAKVGSRLIELLMETAYIQPPV Q ADGPP
Sbjct: 211  VTNLMKQQKVHQVRRIVKEQGDSKPWGQDAQAKVGSRLIELLMETAYIQPPVTQAADGPP 270

Query: 1018 DIRPAFRHTLRTITKEQQKLSRRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTG 1197
            DIRPAFRH+LRT+TKEQQK SRRYGVIECD LVRQGLD+TARHMVIPYMPMLVPP+ W G
Sbjct: 271  DIRPAFRHSLRTVTKEQQKTSRRYGVIECDPLVRQGLDRTARHMVIPYMPMLVPPVNWMG 330

Query: 1198 YDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVD 1377
            YD+GAH FLPSY+MR+HG+RQQREAVKRAP+KQ+QAVFEALDTLGSTKWRVNKRVLS+VD
Sbjct: 331  YDKGAHLFLPSYIMRIHGARQQREAVKRAPRKQMQAVFEALDTLGSTKWRVNKRVLSIVD 390

Query: 1378 RIWSSGGRLADLIDREDIPLPEKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKL 1557
            RIWSSGG LADL+DR DIPLPEKP TEDE               ENSERHSQRCDVELKL
Sbjct: 391  RIWSSGGCLADLVDRADIPLPEKPDTEDEVVLKKWKWKLKSVKKENSERHSQRCDVELKL 450

Query: 1558 AVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLK 1737
            AV RK+KDEEGFYYPHNLDFRGRAYPMHPYL+HL SDLCRGILEFAEGRPLGKSGLRWLK
Sbjct: 451  AVGRKLKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLK 510

Query: 1738 IHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINL 1917
            IHL  LY GGVDKLSY+GRIAFTENH+EDIFDSADRPLEGRRWWLGAEDPFQCL VCINL
Sbjct: 511  IHLANLYAGGVDKLSYEGRIAFTENHLEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINL 570

Query: 1918 AEALRSSSPDTTISHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAA 2097
            AEALRSSSP+TTISH PVHQDGSCNGLQHYAALGRD++GA AVNLV GDKP DVYSGIAA
Sbjct: 571  AEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGDKPADVYSGIAA 630

Query: 2098 RVLDIMKRDAAKDPATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLK 2277
            RVL+IM+RDA KDP+T+PNALRA++L+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLK
Sbjct: 631  RVLEIMQRDAQKDPSTDPNALRARILVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLK 690

Query: 2278 ERGAIEDESELFSASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPL 2457
            ERG I D++ELF ASCY AK TL AL EMF+ AR+IM+WLG+CAK+IASENQPVRWTTPL
Sbjct: 691  ERGVIADDTELFGASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENQPVRWTTPL 750

Query: 2458 GLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVA 2637
            GLPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVA
Sbjct: 751  GLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVA 810

Query: 2638 CSEAGLNFAGVHDSYWTHACDVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPP 2817
            C  AGLNFAGVHDSYWTHACDVDQ+N ILREKFVELY+ PILENLLESFQ+SFPTL FP 
Sbjct: 811  CKNAGLNFAGVHDSYWTHACDVDQMNRILREKFVELYQTPILENLLESFQQSFPTLSFPL 870

Query: 2818 LPERGTY 2838
            LPERG +
Sbjct: 871  LPERGDF 877


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1411 bits (3653), Expect = 0.0
 Identities = 686/881 (77%), Positives = 770/881 (87%), Gaps = 2/881 (0%)
 Frame = +1

Query: 202  DADEAAEVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPL--GMGAGKYAMLKR 375
            D     E+QE+LEE+             G   +    L   +   L  GMG GKY +L+R
Sbjct: 151  DLSAIDEIQELLEEM-------------GKEEKKELELRDQKQIKLVGGMGQGKYLLLRR 197

Query: 376  RQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCAD 555
            RQ+KIETEAWEQAAKEY+ELL DMCE+KLAPNLPY+KSLFLGWFEP +D IV EQ+LC  
Sbjct: 198  RQVKIETEAWEQAAKEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRK 257

Query: 556  PKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIH 735
             K + ++  YFD+LPAEMM+VITMHKLM LLMTGG  GS RVVQAACQ+GEAIE EVRIH
Sbjct: 258  GKNRTAYAPYFDQLPAEMMSVITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIH 317

Query: 736  KFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPW 915
            KFLEKT+K+  KDKK +  E+D V KEQ+ LRKKVT+LMK  KL QVR+IVKGQDDS+PW
Sbjct: 318  KFLEKTRKKTDKDKKADGGESDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPW 377

Query: 916  GQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGV 1095
            GQ+AQAKVGSRLIELLM+TAYIQPPVDQ ADGPPDIRPAFRH+L+T+TKE QK SRRYGV
Sbjct: 378  GQDAQAKVGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGV 437

Query: 1096 IECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAV 1275
            IECD LVR+GL++TARHMVIPYMPMLVPP+ WTGYD+GA+ FLPSYVMR HG+RQQREAV
Sbjct: 438  IECDPLVRKGLERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAV 497

Query: 1276 KRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYT 1455
            KRAP+KQL+ VFEALDTLG+TKWRVNKRVLSVVDRIW+SGGRLADL+DRED+P+PE+P T
Sbjct: 498  KRAPRKQLEPVFEALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDT 557

Query: 1456 EDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYP 1635
            EDE++             ENSERHSQRCD+ELKLAVAR+MKDE+GF+YPHNLDFRGRAYP
Sbjct: 558  EDEAEIKKWKWKVKAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYP 617

Query: 1636 MHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENH 1815
            MHPYL+HL SDLCRGILEFAEGRPLGKSGL+WLKIHL  LY GGVDKLSY+GRIAFTENH
Sbjct: 618  MHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENH 677

Query: 1816 MEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDGSCNG 1995
            ++DIFDSADRPLEGRRWWL AEDPFQCL  CINL+EALRSSSP+TTISH PVHQDGSCNG
Sbjct: 678  LDDIFDSADRPLEGRRWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNG 737

Query: 1996 LQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLL 2175
            LQHYAALGRD++GAAAVNLV G+KP DVYSGIAARVLDIM+RDA KDP T PNA+ A++L
Sbjct: 738  LQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARIL 797

Query: 2176 ISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIAL 2355
            I+QVDRKLVKQTVMTSVYGVTY+GAR+QIK+RLKER  I D+SELF ASCY AKTTL AL
Sbjct: 798  INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTAL 857

Query: 2356 EEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQ 2535
             EMF+ AR+IM+WLGDCAK+IASENQPVRWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQ
Sbjct: 858  GEMFEAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQ 917

Query: 2536 RETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACDVDQLN 2715
            RETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC +AGLNFAGVHDSYWTHACD+D++N
Sbjct: 918  RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEMN 977

Query: 2716 VILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
             ILREKFVELYEKPILENLLESFQ+SFPTL FPPLPERG +
Sbjct: 978  KILREKFVELYEKPILENLLESFQQSFPTLNFPPLPERGDF 1018


>ref|XP_008788965.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial [Phoenix
            dactylifera]
          Length = 1036

 Score = 1399 bits (3620), Expect = 0.0
 Identities = 685/884 (77%), Positives = 769/884 (86%), Gaps = 4/884 (0%)
 Frame = +1

Query: 199  TDADEAA----EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAM 366
            TD DE A    E+Q +LEE+  V+V      ++ +    ++       +  GMGA KYA 
Sbjct: 140  TDLDEEASSIEEIQSLLEEMSRVEVAEDWKVSDRSQEFPQKAQLEEPKKVSGMGAKKYAK 199

Query: 367  LKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQL 546
            L++RQIKIETEAWEQAAKEYKELL DMCE+KLAPNLPYVKSLFLGWFEPF+D+I  EQ+ 
Sbjct: 200  LRQRQIKIETEAWEQAAKEYKELLQDMCEQKLAPNLPYVKSLFLGWFEPFRDKIAAEQEK 259

Query: 547  CADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEV 726
            C D + + ++  Y  +LPA+MMAVITMHKLMSLLMTGG +GSV VVQAACQVG AIEQEV
Sbjct: 260  CRDVRNRAAYGPYIGQLPADMMAVITMHKLMSLLMTGGSNGSVLVVQAACQVGSAIEQEV 319

Query: 727  RIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDS 906
            +IH+FLEK+K++   +KK+  AE D++ KEQE LRKKVTNLMK  KL QVRKIVKGQDDS
Sbjct: 320  KIHRFLEKSKQKTNINKKSGVAEVDNITKEQELLRKKVTNLMKKQKLQQVRKIVKGQDDS 379

Query: 907  RPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRR 1086
            +PWGQ+++AKVGSRLIELL+ETAYIQPPV+Q AD PPDIRPAFRH LR +  EQ+K+SRR
Sbjct: 380  KPWGQDSRAKVGSRLIELLVETAYIQPPVNQLADSPPDIRPAFRHLLRNVQNEQKKISRR 439

Query: 1087 YGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQR 1266
            YG IECD LVRQGLD+TARHMVIPYMPMLVPP+ W GYD+GAH FLPSY+MR HGSRQQR
Sbjct: 440  YGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWKGYDKGAHLFLPSYLMRTHGSRQQR 499

Query: 1267 EAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEK 1446
            EAVKRAP+KQLQ VFEALDTLG+TKWRVNKRVLS+VDR+WSSGGRLA+L+DR+DIPLPEK
Sbjct: 500  EAVKRAPRKQLQLVFEALDTLGNTKWRVNKRVLSIVDRMWSSGGRLANLVDRDDIPLPEK 559

Query: 1447 PYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGR 1626
            P TED ++             ENSERHSQRCDVE+KLAVARKMKDEEGFYYPHNLDFRGR
Sbjct: 560  PETEDGAEIRKWKWKLKSVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFRGR 619

Query: 1627 AYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFT 1806
            AYPMHPYL+HL SDLCRGILEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSYDGRIAFT
Sbjct: 620  AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFT 679

Query: 1807 ENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDGS 1986
            ENH++DIFDSADRPLEGRRWWLGAEDPFQCL VCINLAEALRSSSP++TISH PVHQDGS
Sbjct: 680  ENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQDGS 739

Query: 1987 CNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRA 2166
            CNGLQHYAALGRD++GA +VNLV G+KP DVYSGIAARV +IM++DA KDPATEPNAL A
Sbjct: 740  CNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAEKDPATEPNALHA 799

Query: 2167 KLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTL 2346
            +LLI QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKERGAI D+ ELF ASCY AKTTL
Sbjct: 800  RLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLELFRASCYAAKTTL 859

Query: 2347 IALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVL 2526
             AL EMFQ AR+IM+WLGDCAK+IASEN  VRWTTPLGLPVVQPYR+LGRH+IKTSLQVL
Sbjct: 860  TALGEMFQAARSIMSWLGDCAKVIASENHAVRWTTPLGLPVVQPYRKLGRHIIKTSLQVL 919

Query: 2527 TLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACDVD 2706
            +LQRETDK+MVKRQ+TAFPPNFVHSLD SHMMM+AVAC  AGLNFAGVHDSYWTHACDVD
Sbjct: 920  SLQRETDKIMVKRQRTAFPPNFVHSLDGSHMMMSAVACKRAGLNFAGVHDSYWTHACDVD 979

Query: 2707 QLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            ++N ILREKFVELYE PILENLLESFQ+SFP+L F PLPERG +
Sbjct: 980  EMNRILREKFVELYEIPILENLLESFQQSFPSLSFRPLPERGDF 1023


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1384 bits (3581), Expect = 0.0
 Identities = 672/884 (76%), Positives = 758/884 (85%), Gaps = 4/884 (0%)
 Frame = +1

Query: 199  TDADEAA----EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAM 366
            TDA+E      E+QE+LEE+   + +    +             +      GMG GKY +
Sbjct: 106  TDAEEDVSVVDEIQELLEEMSKEEKELEFSHQ------------KQTKLVGGMGQGKYLL 153

Query: 367  LKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQL 546
            L+RRQ+KIETEAWEQAAKEYKELL DMCE+KLAPNLPY+KSLFLGWFEP +D I  EQ+L
Sbjct: 154  LRRRQVKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQEL 213

Query: 547  CADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEV 726
            C   K + ++  YFD+LPAEMM+VITMHKL+ LLMTGG  GS RVVQAAC +G+AIE EV
Sbjct: 214  CRKGKNRAAYAPYFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEV 273

Query: 727  RIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDS 906
            RI+KFLEKTKK+  KDKK E  E+D   KEQ+ LRKKVT+LMK  KL QVR+IVK QDDS
Sbjct: 274  RIYKFLEKTKKKTDKDKKAEGGESDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDS 333

Query: 907  RPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRR 1086
            +PWGQ+AQAKVGS LIELLM+TAYIQ P DQ ADGPPDIRPAFRHTL+TITKE QK SRR
Sbjct: 334  KPWGQDAQAKVGSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRR 393

Query: 1087 YGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQR 1266
            YG+IECD LVR+GL++TARHMVIPYMPMLVPP+ WTGYD+GA+ FLPSYVMR HG+RQQR
Sbjct: 394  YGLIECDPLVRKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQR 453

Query: 1267 EAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEK 1446
            EAVKR  +KQL+ +FEALDTLG+TKWR+NKRVL VVDRIW+SGGRLADL+DRED+PLPE+
Sbjct: 454  EAVKRTSRKQLEPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEE 513

Query: 1447 PYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGR 1626
            P TEDE++             ENSERHSQRCD ELKLAVAR+MKDE GF+YPHNLDFRGR
Sbjct: 514  PETEDEAELKKWKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGR 573

Query: 1627 AYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFT 1806
            AYPMHPYL+HL SDLCRGILEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSY+GRIAFT
Sbjct: 574  AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFT 633

Query: 1807 ENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDGS 1986
            ENH++DIFDSADRPLEGRRWWL A+DPFQCL VCINL+EALRS SP+T ISH P+HQDGS
Sbjct: 634  ENHLDDIFDSADRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGS 693

Query: 1987 CNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRA 2166
            CNGLQHYAALGRD++GAAAVNLV GDKP DVYSG+AARVLDIM+RDA KDP TEPNA+ A
Sbjct: 694  CNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHA 753

Query: 2167 KLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTL 2346
            +LLI+QVDRKLVKQTVMTSVYGVTY+GAR+QIK+RLKER AI DESELF ASCY AKTT+
Sbjct: 754  RLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTI 813

Query: 2347 IALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVL 2526
             AL EMF+ AR+IM+WLGDCAK+IASENQPVRWTTPLGLPVVQPYR+LGRHLIKTSLQVL
Sbjct: 814  TALGEMFKAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL 873

Query: 2527 TLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACDVD 2706
            TLQRETDKVMVKRQ+TAFPPNF+HSLD SHMMMTAVAC  AGLNFAGVHDS+WTHACDVD
Sbjct: 874  TLQRETDKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACKRAGLNFAGVHDSFWTHACDVD 933

Query: 2707 QLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            ++N ILREKFVELYE PI+ENLLESFQ+SFP L FPPLPE G +
Sbjct: 934  EMNKILREKFVELYETPIMENLLESFQQSFPALSFPPLPECGDF 977


>gb|PAN11641.1| hypothetical protein PAHAL_B02160 [Panicum hallii]
          Length = 1004

 Score = 1380 bits (3572), Expect = 0.0
 Identities = 670/865 (77%), Positives = 753/865 (87%), Gaps = 5/865 (0%)
 Frame = +1

Query: 259  VDSRSGYANGNNNRVRRNLPRTQHRPL----GMGAGKYAMLKRRQIKIETEAWEQAAKEY 426
            V+ +      +  R RRN    Q +      GM   KYA L+RRQI++ETEAWEQAAKEY
Sbjct: 127  VEEQQASGRDHRGRHRRNRRGQQAQVAAAEHGMTYHKYASLRRRQIRVETEAWEQAAKEY 186

Query: 427  KELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPKCKLSHRQYFDKLPAE 606
            +ELLADMCE+KLAPNLPY+KSLFLGWFEP +D+I  EQ+L AD   + SH  YF+ LPA+
Sbjct: 187  RELLADMCEQKLAPNLPYIKSLFLGWFEPLRDQIAAEQELVADRGSRASHGPYFNMLPAD 246

Query: 607  MMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKFLEKTKKRPVKDKKNE 786
            MMAVITMHKLM LLMTG GDGSVRV+QAACQ+GEAIE EVRIH+FLEKT+K+  K+K+NE
Sbjct: 247  MMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHRFLEKTRKKSNKEKENE 306

Query: 787  DAEADS-VAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQEAQAKVGSRLIELL 963
            +   DS +AKEQ+ LRKKVT+LMK  KL QVRKIVK QDDSRPWGQ+A AKVGSRLIEL 
Sbjct: 307  EEICDSDIAKEQQRLRKKVTDLMKKQKLRQVRKIVKNQDDSRPWGQDAHAKVGSRLIELF 366

Query: 964  METAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIECDLLVRQGLDKTAR 1143
            +ETA+IQPP  Q +DG PDIRPAFRH +RT+ KEQQKLSRRYGVI+CD LVRQGLD+TA+
Sbjct: 367  IETAHIQPPASQSSDGLPDIRPAFRHEMRTVPKEQQKLSRRYGVIKCDPLVRQGLDRTAK 426

Query: 1144 HMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKRAPKKQLQAVFEALD 1323
            HMVIPYMPML+PP+ WTGYD+GAH FLPSYVMR HG+RQQREAVKRAPK+Q+Q+VFEAL+
Sbjct: 427  HMVIPYMPMLMPPICWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPKEQMQSVFEALN 486

Query: 1324 TLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTEDESQXXXXXXXXXXX 1503
            TLGSTKWRVNKRVLS++DRIWSSGGRLADL+DR D+PLPEKP TEDE+            
Sbjct: 487  TLGSTKWRVNKRVLSIIDRIWSSGGRLADLVDRTDVPLPEKPDTEDETLLKKWRWHMRSV 546

Query: 1504 XXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLSHLSSDLCRGI 1683
              ENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL+HL SDLCRG+
Sbjct: 547  KKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGV 606

Query: 1684 LEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHMEDIFDSADRPLEGRR 1863
            LEFAEGRPLG+SGLRWLKIHL  LY GGVDKLSYDGRIAF ENH+E+IFDSADRPLEG+R
Sbjct: 607  LEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSYDGRIAFAENHLEEIFDSADRPLEGKR 666

Query: 1864 WWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDGSCNGLQHYAALGRDEIGAAA 2043
            WWLGAEDPFQCL VC+NL EALRSSSP+TTISH PVHQDGSCNGLQHYAALGRD++GA A
Sbjct: 667  WWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIA 726

Query: 2044 VNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLISQVDRKLVKQTVMTS 2223
            VNLV G+KP DVYSGIA RV++IM+ D+ KDP+T+P+A RA+L++ QVDRKLVKQTVMTS
Sbjct: 727  VNLVAGEKPADVYSGIATRVVEIMRMDSQKDPSTDPDAARARLILDQVDRKLVKQTVMTS 786

Query: 2224 VYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEEMFQGARNIMNWLGD 2403
            VYGVTYVGAREQIK+RLKERG I D++ELF ASCY AK TL AL EMFQ AR+IMNWLGD
Sbjct: 787  VYGVTYVGAREQIKRRLKERGVIADDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGD 846

Query: 2404 CAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFP 2583
            CAK+IA EN+PV+WTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFP
Sbjct: 847  CAKVIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFP 906

Query: 2584 PNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACDVDQLNVILREKFVELYEKPIL 2763
            PNFVHSLD SHMMMTAVAC   GLNFAGVHDSYWTHA DVD +N ILREKFVELY+ PIL
Sbjct: 907  PNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHASDVDTMNKILREKFVELYDTPIL 966

Query: 2764 ENLLESFQKSFPTLKFPPLPERGTY 2838
            ENLLESF+KSFPTLKFPPLPERG +
Sbjct: 967  ENLLESFEKSFPTLKFPPLPERGDF 991


>ref|XP_010943346.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Elaeis
            guineensis]
          Length = 1036

 Score = 1380 bits (3572), Expect = 0.0
 Identities = 676/884 (76%), Positives = 760/884 (85%), Gaps = 4/884 (0%)
 Frame = +1

Query: 199  TDADEAA----EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAM 366
            TD DE A    E+Q +LEE   V+V      ++ +    ++       +  GMGA KYA 
Sbjct: 140  TDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQKAQREEPKKVSGMGAKKYAK 199

Query: 367  LKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQL 546
            L++RQIKIETEAWEQAAKEYKELL DMCE+KLAPNLPYVKSL LGWFEPF+D+I  EQ+ 
Sbjct: 200  LRQRQIKIETEAWEQAAKEYKELLQDMCEQKLAPNLPYVKSLLLGWFEPFRDKIAAEQEK 259

Query: 547  CADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEV 726
            C + + + ++  Y  +LPA+MMAVITMHKLMSLLMT G +GSV VVQAACQVG AIEQEV
Sbjct: 260  CREVRNRAAYGPYIGQLPADMMAVITMHKLMSLLMTSGSNGSVLVVQAACQVGSAIEQEV 319

Query: 727  RIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDS 906
            +IH+FLEK+KK+   DKK+  AE D++ KEQE LRK+VTNLMK  KL QVRKIVKGQDDS
Sbjct: 320  KIHRFLEKSKKKTNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQVRKIVKGQDDS 379

Query: 907  RPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRR 1086
            +PWGQ+ QAKVGSRLIELL+ETAYIQPP++Q AD PPDIRPAFRH LR + KEQ+K+SRR
Sbjct: 380  KPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQKKISRR 439

Query: 1087 YGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQR 1266
            YG IECD LVRQGLD+TARHMVIPYMPMLVPP+ W  YD+GAH FLPSYVMR HGSRQQR
Sbjct: 440  YGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHGSRQQR 499

Query: 1267 EAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEK 1446
             AVKRAP++Q+Q VFEALDTLG+TKWRVNKRVL++VDRIWSSGGRLA+L+DR+D PLPEK
Sbjct: 500  AAVKRAPREQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDNPLPEK 559

Query: 1447 PYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGR 1626
            P TED ++             ENSERHSQRCDVE+KLAVARKMKDEEGFYYPHNLDFRGR
Sbjct: 560  PETEDGAEIRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFRGR 619

Query: 1627 AYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFT 1806
            AYPMHPYL+HL SDLCRGILEFAEGRPLGKSGL WLKIHL  LY GGVDKLSYDGRIAFT
Sbjct: 620  AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRIAFT 679

Query: 1807 ENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDGS 1986
            ENH++DIFDSADRPLEGRRWWLGAEDPFQCL VCINLAEALRSSSP++TISH PVHQDGS
Sbjct: 680  ENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQDGS 739

Query: 1987 CNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRA 2166
            CNGLQHYAALGRD++GA +VNLV G+KP DVYSGIAARV +IM++DA KDPA +PNA  A
Sbjct: 740  CNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDPNASHA 799

Query: 2167 KLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTL 2346
            +LLI+QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKERGAI D+ E F ASCY AKTTL
Sbjct: 800  RLLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYAAKTTL 859

Query: 2347 IALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVL 2526
             AL EMFQ AR+IM WLGDCAK+IASENQ VRWTTPLGLPVVQPYR+LGRH+IKTSLQVL
Sbjct: 860  TALGEMFQAARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKTSLQVL 919

Query: 2527 TLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACDVD 2706
            +LQRETDK+MVKRQ+TAFPPNFVHSLD SHMMMTAVAC  AGLNFAGVHDSYWTHACDVD
Sbjct: 920  SLQRETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVD 979

Query: 2707 QLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            ++N ILR+KFVELYE PILENL ESFQ+SFP+L FPPLPERG +
Sbjct: 980  EMNRILRDKFVELYEIPILENLRESFQQSFPSLGFPPLPERGDF 1023


>ref|XP_015612355.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X2
            [Oryza sativa Japonica Group]
          Length = 993

 Score = 1379 bits (3569), Expect = 0.0
 Identities = 664/834 (79%), Positives = 741/834 (88%), Gaps = 1/834 (0%)
 Frame = +1

Query: 340  GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 519
            G+G  KYAML+RRQI+IETEAWEQAA+EY+ELLADMC++KLAPNLPYVKSLFLGWFEP +
Sbjct: 147  GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 206

Query: 520  DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 699
            D+I+ EQ+L  +   + SH +YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 207  DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 266

Query: 700  VGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQV 876
            +GEAIE EVRIHKFLEKTKK+  K+  NE+   DS +AKEQE LRKKVT+LMK  K+ QV
Sbjct: 267  IGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQV 326

Query: 877  RKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTI 1056
            R IVK QD+S+PWGQ+A AKVGSRLIEL++ETAYIQPP  Q ADGPPDIRPAF H +RT+
Sbjct: 327  RNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTV 386

Query: 1057 TKEQQKLSRRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYV 1236
             +EQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYV
Sbjct: 387  AREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYV 446

Query: 1237 MRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLI 1416
            MR HG+RQQR+AV+RAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL+
Sbjct: 447  MRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLV 506

Query: 1417 DREDIPLPEKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFY 1596
            DR D+ LPEKP TEDE +             ENSERHSQRCDVELKLAVARKMKDE+GFY
Sbjct: 507  DRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFY 566

Query: 1597 YPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDK 1776
            YPHNLDFRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL  LY GGVDK
Sbjct: 567  YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 626

Query: 1777 LSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTI 1956
            LSYDGRIAFTENH+EDIFDSADRPLEG+RWWLGAEDPFQCL VCINL EALRS SP+T I
Sbjct: 627  LSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMI 686

Query: 1957 SHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKD 2136
            SH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RV++IMK DA KD
Sbjct: 687  SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKD 746

Query: 2137 PATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFS 2316
            PAT+P+A RA+LL+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER  I D+SELFS
Sbjct: 747  PATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFS 806

Query: 2317 ASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGR 2496
            ASCY AK TL AL EMFQ AR+IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LGR
Sbjct: 807  ASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGR 866

Query: 2497 HLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHD 2676
            HLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC   GLNFAGVHD
Sbjct: 867  HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHD 926

Query: 2677 SYWTHACDVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            SYWTHACDVD +N ILREKFVELY+ PILENLLESF+KSFP LKFPPLPERG +
Sbjct: 927  SYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDF 980


>ref|XP_015612354.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X1
            [Oryza sativa Japonica Group]
 dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica Group]
 dbj|BAC98395.1| T7 bacteriophage-type single subunit RNA polymerase (mitochondrion)
            [Oryza sativa Japonica Group]
 dbj|BAF24573.1| Os09g0246200 [Oryza sativa Japonica Group]
          Length = 1017

 Score = 1379 bits (3569), Expect = 0.0
 Identities = 664/834 (79%), Positives = 741/834 (88%), Gaps = 1/834 (0%)
 Frame = +1

Query: 340  GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 519
            G+G  KYAML+RRQI+IETEAWEQAA+EY+ELLADMC++KLAPNLPYVKSLFLGWFEP +
Sbjct: 171  GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 230

Query: 520  DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 699
            D+I+ EQ+L  +   + SH +YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 231  DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 290

Query: 700  VGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQV 876
            +GEAIE EVRIHKFLEKTKK+  K+  NE+   DS +AKEQE LRKKVT+LMK  K+ QV
Sbjct: 291  IGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQV 350

Query: 877  RKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTI 1056
            R IVK QD+S+PWGQ+A AKVGSRLIEL++ETAYIQPP  Q ADGPPDIRPAF H +RT+
Sbjct: 351  RNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTV 410

Query: 1057 TKEQQKLSRRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYV 1236
             +EQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYV
Sbjct: 411  AREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYV 470

Query: 1237 MRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLI 1416
            MR HG+RQQR+AV+RAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL+
Sbjct: 471  MRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLV 530

Query: 1417 DREDIPLPEKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFY 1596
            DR D+ LPEKP TEDE +             ENSERHSQRCDVELKLAVARKMKDE+GFY
Sbjct: 531  DRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFY 590

Query: 1597 YPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDK 1776
            YPHNLDFRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL  LY GGVDK
Sbjct: 591  YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 650

Query: 1777 LSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTI 1956
            LSYDGRIAFTENH+EDIFDSADRPLEG+RWWLGAEDPFQCL VCINL EALRS SP+T I
Sbjct: 651  LSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMI 710

Query: 1957 SHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKD 2136
            SH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RV++IMK DA KD
Sbjct: 711  SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKD 770

Query: 2137 PATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFS 2316
            PAT+P+A RA+LL+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER  I D+SELFS
Sbjct: 771  PATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFS 830

Query: 2317 ASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGR 2496
            ASCY AK TL AL EMFQ AR+IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LGR
Sbjct: 831  ASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGR 890

Query: 2497 HLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHD 2676
            HLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC   GLNFAGVHD
Sbjct: 891  HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHD 950

Query: 2677 SYWTHACDVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            SYWTHACDVD +N ILREKFVELY+ PILENLLESF+KSFP LKFPPLPERG +
Sbjct: 951  SYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDF 1004


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score = 1379 bits (3569), Expect = 0.0
 Identities = 664/834 (79%), Positives = 741/834 (88%), Gaps = 1/834 (0%)
 Frame = +1

Query: 340  GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 519
            G+G  KYAML+RRQI+IETEAWEQAA+EY+ELLADMC++KLAPNLPYVKSLFLGWFEP +
Sbjct: 137  GVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLR 196

Query: 520  DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 699
            D+I+ EQ+L  +   + SH +YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 197  DQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 256

Query: 700  VGEAIEQEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQV 876
            +GEAIE EVRIHKFLEKTKK+  K+  NE+   DS +AKEQE LRKKVT+LMK  K+ QV
Sbjct: 257  IGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQV 316

Query: 877  RKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTI 1056
            R IVK QD+S+PWGQ+A AKVGSRLIEL++ETAYIQPP  Q ADGPPDIRPAF H +RT+
Sbjct: 317  RNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTV 376

Query: 1057 TKEQQKLSRRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYV 1236
             +EQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYV
Sbjct: 377  AREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYV 436

Query: 1237 MRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLI 1416
            MR HG+RQQR+AV+RAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL+
Sbjct: 437  MRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLV 496

Query: 1417 DREDIPLPEKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFY 1596
            DR D+ LPEKP TEDE +             ENSERHSQRCDVELKLAVARKMKDE+GFY
Sbjct: 497  DRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFY 556

Query: 1597 YPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDK 1776
            YPHNLDFRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL  LY GGVDK
Sbjct: 557  YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDK 616

Query: 1777 LSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTI 1956
            LSYDGRIAFTENH+EDIFDSADRPLEG+RWWLGAEDPFQCL VCINL EALRS SP+T I
Sbjct: 617  LSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMI 676

Query: 1957 SHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKD 2136
            SH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RV++IMK DA KD
Sbjct: 677  SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKD 736

Query: 2137 PATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFS 2316
            PAT+P+A RA+LL+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER  I D+SELFS
Sbjct: 737  PATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFS 796

Query: 2317 ASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGR 2496
            ASCY AK TL AL EMFQ AR+IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LGR
Sbjct: 797  ASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGR 856

Query: 2497 HLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHD 2676
            HLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC   GLNFAGVHD
Sbjct: 857  HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHD 916

Query: 2677 SYWTHACDVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            SYWTHACDVD +N ILREKFVELY+ PILENLLESF+KSFP LKFPPLPERG +
Sbjct: 917  SYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDF 970


>ref|XP_006660444.2| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Oryza
            brachyantha]
          Length = 1059

 Score = 1379 bits (3568), Expect = 0.0
 Identities = 678/888 (76%), Positives = 754/888 (84%), Gaps = 10/888 (1%)
 Frame = +1

Query: 205  ADEAAEVQEMLEELKNVQVDS--RSGYANGNNNRV--RRNLPRTQHR-----PLGMGAGK 357
            A EA E+    EE+      S      A G   R   RR   R +H        G G  K
Sbjct: 159  ASEAEELHHSSEEIARGDNSSLPAPAPATGQEGREVGRRRTGRGKHSVEAKASHGFGYYK 218

Query: 358  YAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKE 537
            YAML+RRQ++IETEAWEQAAKEY+ELLADMCE KLAPNLPYVKSLFLGWFEP +D+I+ E
Sbjct: 219  YAMLRRRQVQIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAE 278

Query: 538  QQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIE 717
            Q L  + + + SH +YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ+GEAIE
Sbjct: 279  QDLVCERRARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIE 338

Query: 718  QEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQVRKIVKG 894
             EVR+HKFLEK KK+  K+  NE+    S +AKEQE LRKKVT+LMK +KL QVR IVK 
Sbjct: 339  HEVRLHKFLEKPKKKRSKEMDNEEEVGCSDIAKEQERLRKKVTDLMKKHKLRQVRYIVKK 398

Query: 895  QDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQK 1074
            QD+S+PWGQ+  AKVGSRLIEL++ETAYIQPP  Q ADGPPDIRPAF H +RT+ KEQQK
Sbjct: 399  QDNSKPWGQDVHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAKEQQK 458

Query: 1075 LSRRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGS 1254
             SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYVMR HG+
Sbjct: 459  SSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGA 518

Query: 1255 RQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIP 1434
            RQQREAVKRAP++Q+Q+VFEALDTLGSTKWRVNKRVLS+VDRIWSSGGRLADL+DR D+ 
Sbjct: 519  RQQREAVKRAPREQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVA 578

Query: 1435 LPEKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 1614
            LPEKP TEDE++             ENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD
Sbjct: 579  LPEKPDTEDEAKLKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLD 638

Query: 1615 FRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGR 1794
            FRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLGKSGLRWLKIHL  LY GGVDKLSYDGR
Sbjct: 639  FRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGR 698

Query: 1795 IAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVH 1974
            IAFTENH+EDIFDSADRPLEG+RWWLGAEDPFQCL VCINL EALRS SP+T ISH PVH
Sbjct: 699  IAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVH 758

Query: 1975 QDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPN 2154
            QDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RVL+IM+ DA KDPAT+P+
Sbjct: 759  QDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPD 818

Query: 2155 ALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMA 2334
            A RA++L+ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER  I D+SELFSASCY A
Sbjct: 819  AARARMLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMIGDDSELFSASCYAA 878

Query: 2335 KTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTS 2514
            K TL AL EMFQ AR+IMNWLGDCAK+IA EN+PV+WTTPLGLPVVQPYR+LGRHLIKTS
Sbjct: 879  KVTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPLGLPVVQPYRKLGRHLIKTS 938

Query: 2515 LQVLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHA 2694
            LQVLTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC   GLNFAGVHDSYWTHA
Sbjct: 939  LQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHA 998

Query: 2695 CDVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            CDVD +N ILREKFVELY+ PILENLL SF+KSFP LKFPPLPERG +
Sbjct: 999  CDVDTMNKILREKFVELYDTPILENLLGSFEKSFPELKFPPLPERGDF 1046


>ref|XP_009394557.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Musa
            acuminata subsp. malaccensis]
          Length = 994

 Score = 1375 bits (3558), Expect = 0.0
 Identities = 674/882 (76%), Positives = 757/882 (85%), Gaps = 2/882 (0%)
 Frame = +1

Query: 199  TDADEAAEVQEMLEELKNVQVDSRSGYANGNNNRVRRN--LPRTQHRPLGMGAGKYAMLK 372
            TDADE     E ++ L  +  +   G  +   N++RRN   P+ +    GM A KY ML+
Sbjct: 105  TDADEDTSTIEEMQRLLELSAEISGGKEDKRFNKLRRNQQFPKIK---AGMSAEKYTMLR 161

Query: 373  RRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCA 552
            RRQI+IETEAWE AAKEYKELL DMCERKLAPNLPY+KSLFLGWFEPF+D+IV EQ    
Sbjct: 162  RRQIQIETEAWETAAKEYKELLMDMCERKLAPNLPYMKSLFLGWFEPFRDKIVAEQGQSM 221

Query: 553  DPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRI 732
              K K S++ YF +LPAEM+AVITMHKL+SLLMTGG  G VRVVQA CQVGEAIEQE RI
Sbjct: 222  -AKNKFSYQHYFSQLPAEMVAVITMHKLVSLLMTGGESGGVRVVQAVCQVGEAIEQEARI 280

Query: 733  HKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRP 912
            H+FLEKT+K+  KD+ +++ E  +V KE++ LRKKVT+LMK  K+ QVRKIV+GQD S+P
Sbjct: 281  HRFLEKTRKKTSKDQTSDEVEGGAVTKEEQILRKKVTDLMKKQKVQQVRKIVRGQDVSKP 340

Query: 913  WGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYG 1092
            WGQ+AQ KVGSRLIEL META+IQPPV Q ADGPPDIRPAFR  +R ++ EQ K ++RYG
Sbjct: 341  WGQDAQVKVGSRLIELFMETAFIQPPVSQSADGPPDIRPAFRRVIRIVSSEQLK-TKRYG 399

Query: 1093 VIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREA 1272
            +IECD LVRQGLD+TARHMVIPYMPML+PP+ W GYD+GAH  LPSY+MR+HG+RQQREA
Sbjct: 400  IIECDPLVRQGLDRTARHMVIPYMPMLMPPLNWKGYDRGAHLILPSYIMRIHGARQQREA 459

Query: 1273 VKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPY 1452
            +KRAPKKQ+QAVF+ALDTLG TKWRVNKRVLS+VDRIWSSGGRLADL+DREDIPLPEKP 
Sbjct: 460  LKRAPKKQMQAVFQALDTLGCTKWRVNKRVLSIVDRIWSSGGRLADLVDREDIPLPEKPD 519

Query: 1453 TEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAY 1632
            TEDES+             ENSERHS+RCDVELKLAVARKMKDEEGFYYPHNLDFRGRAY
Sbjct: 520  TEDESELRKWKWKMRSVKKENSERHSRRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAY 579

Query: 1633 PMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTEN 1812
            PMHPYL+HL SDLCRGILEFAEGRPL KSGLRWLKIHL  LY GGVDKLSYDGR+AFTEN
Sbjct: 580  PMHPYLNHLGSDLCRGILEFAEGRPLMKSGLRWLKIHLANLYAGGVDKLSYDGRLAFTEN 639

Query: 1813 HMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDGSCN 1992
            H+EDIFDSADRPLEGRRWWLGAEDPFQCL VCINLAEALRSSSP+TTISH PVHQDGSCN
Sbjct: 640  HVEDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPETTISHIPVHQDGSCN 699

Query: 1993 GLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKL 2172
            GLQHYAALGRD++GA AVNLV GDKP DVYSGIAARVLDIM+RD+ KDPA +PNAL A+L
Sbjct: 700  GLQHYAALGRDKLGAIAVNLVAGDKPADVYSGIAARVLDIMRRDSQKDPAEDPNALLARL 759

Query: 2173 LISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIA 2352
            ++ QVDRKLVKQTVMTSVYGVT++GAREQIKKRLKERG   D+ ELF AS Y A+TTL A
Sbjct: 760  IVDQVDRKLVKQTVMTSVYGVTFIGAREQIKKRLKERGVTADDRELFGASSYAARTTLTA 819

Query: 2353 LEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTL 2532
            LEEMF+ AR IMNWLGDCAK+IA+EN  VRWTTPLGLPVVQPYR LG+H++KTSLQVLTL
Sbjct: 820  LEEMFEAARKIMNWLGDCAKVIATENHSVRWTTPLGLPVVQPYRALGKHIVKTSLQVLTL 879

Query: 2533 QRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACDVDQL 2712
            QRETDKVMV+RQ+TAFPPNFVHSLD SHMMMTAVAC +AGL FAGVHDSYWTHACDVDQ+
Sbjct: 880  QRETDKVMVRRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLIFAGVHDSYWTHACDVDQM 939

Query: 2713 NVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            N ILREKFVELYEKPILENLLESFQ +FPTL FP LPERG +
Sbjct: 940  NRILREKFVELYEKPILENLLESFQIAFPTLTFPELPERGDF 981


>ref|XP_010943345.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Elaeis
            guineensis]
          Length = 1042

 Score = 1373 bits (3555), Expect = 0.0
 Identities = 676/890 (75%), Positives = 760/890 (85%), Gaps = 10/890 (1%)
 Frame = +1

Query: 199  TDADEAA----EVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAM 366
            TD DE A    E+Q +LEE   V+V      ++ +    ++       +  GMGA KYA 
Sbjct: 140  TDLDEEASSIEEIQSLLEETSTVEVAEDWKLSDRSEKLPQKAQREEPKKVSGMGAKKYAK 199

Query: 367  LKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQL 546
            L++RQIKIETEAWEQAAKEYKELL DMCE+KLAPNLPYVKSL LGWFEPF+D+I  EQ+ 
Sbjct: 200  LRQRQIKIETEAWEQAAKEYKELLQDMCEQKLAPNLPYVKSLLLGWFEPFRDKIAAEQEK 259

Query: 547  CADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEV 726
            C + + + ++  Y  +LPA+MMAVITMHKLMSLLMT G +GSV VVQAACQVG AIEQEV
Sbjct: 260  CREVRNRAAYGPYIGQLPADMMAVITMHKLMSLLMTSGSNGSVLVVQAACQVGSAIEQEV 319

Query: 727  RIHKFLEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDS 906
            +IH+FLEK+KK+   DKK+  AE D++ KEQE LRK+VTNLMK  KL QVRKIVKGQDDS
Sbjct: 320  KIHRFLEKSKKKTNIDKKSGSAEVDNITKEQELLRKRVTNLMKKQKLQQVRKIVKGQDDS 379

Query: 907  RPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRR 1086
            +PWGQ+ QAKVGSRLIELL+ETAYIQPP++Q AD PPDIRPAFRH LR + KEQ+K+SRR
Sbjct: 380  KPWGQDTQAKVGSRLIELLVETAYIQPPINQLADSPPDIRPAFRHYLRNVQKEQKKISRR 439

Query: 1087 YGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQR 1266
            YG IECD LVRQGLD+TARHMVIPYMPMLVPP+ W  YD+GAH FLPSYVMR HGSRQQR
Sbjct: 440  YGFIECDPLVRQGLDRTARHMVIPYMPMLVPPISWQRYDKGAHLFLPSYVMRTHGSRQQR 499

Query: 1267 EAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEK 1446
             AVKRAP++Q+Q VFEALDTLG+TKWRVNKRVL++VDRIWSSGGRLA+L+DR+D PLPEK
Sbjct: 500  AAVKRAPREQMQLVFEALDTLGNTKWRVNKRVLNIVDRIWSSGGRLANLVDRDDNPLPEK 559

Query: 1447 PYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGR 1626
            P TED ++             ENSERHSQRCDVE+KLAVARKMKDEEGFYYPHNLDFRGR
Sbjct: 560  PETEDGAEIRKWKWKLKAVKKENSERHSQRCDVEIKLAVARKMKDEEGFYYPHNLDFRGR 619

Query: 1627 AYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFT 1806
            AYPMHPYL+HL SDLCRGILEFAEGRPLGKSGL WLKIHL  LY GGVDKLSYDGRIAFT
Sbjct: 620  AYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRIAFT 679

Query: 1807 ENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDGS 1986
            ENH++DIFDSADRPLEGRRWWLGAEDPFQCL VCINLAEALRSSSP++TISH PVHQDGS
Sbjct: 680  ENHLDDIFDSADRPLEGRRWWLGAEDPFQCLAVCINLAEALRSSSPESTISHIPVHQDGS 739

Query: 1987 CNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRA 2166
            CNGLQHYAALGRD++GA +VNLV G+KP DVYSGIAARV +IM++DA KDPA +PNA  A
Sbjct: 740  CNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVREIMQKDAQKDPAMDPNASHA 799

Query: 2167 KLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTL 2346
            +LLI+QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKERGAI D+ E F ASCY AKTTL
Sbjct: 800  RLLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGAITDDLESFRASCYAAKTTL 859

Query: 2347 IALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVL 2526
             AL EMFQ AR+IM WLGDCAK+IASENQ VRWTTPLGLPVVQPYR+LGRH+IKTSLQVL
Sbjct: 860  TALGEMFQAARSIMCWLGDCAKVIASENQAVRWTTPLGLPVVQPYRKLGRHIIKTSLQVL 919

Query: 2527 TLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNF------AGVHDSYWT 2688
            +LQRETDK+MVKRQ+TAFPPNFVHSLD SHMMMTAVAC  AGLNF      AGVHDSYWT
Sbjct: 920  SLQRETDKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGCLFSAGVHDSYWT 979

Query: 2689 HACDVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            HACDVD++N ILR+KFVELYE PILENL ESFQ+SFP+L FPPLPERG +
Sbjct: 980  HACDVDEMNRILRDKFVELYEIPILENLRESFQQSFPSLGFPPLPERGDF 1029


>ref|XP_002461035.2| DNA-directed RNA polymerase 1B, mitochondrial [Sorghum bicolor]
          Length = 1011

 Score = 1372 bits (3552), Expect = 0.0
 Identities = 672/895 (75%), Positives = 762/895 (85%), Gaps = 17/895 (1%)
 Frame = +1

Query: 205  ADEAAEVQEMLEELKNVQVD---------SRSGYANGNNNRVR-RNLPRTQHRPL----- 339
            +++A E+   +EE+   Q           +    A G ++R R R   R +H  +     
Sbjct: 104  SEDAEELHHAIEEIVRAQPSQNLPRPQSVAEERQAPGRDHRSRHRRSGRGRHVEVMAAEH 163

Query: 340  GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 519
            GM   +Y  L+RRQI++ETEAWEQAAKEY+ELLADMCE+KLAPNLPY+KSLFLGWFEP +
Sbjct: 164  GMTYHRYTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLR 223

Query: 520  DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 699
            D+IV EQ+L ADP  + SH  YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 224  DQIVTEQELVADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 283

Query: 700  VGEAIEQEVRIHKFLEKTKKRPVKD-KKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQ 873
            +GEAIE EVRI++FLEKT+K+  K+ +K E+A  D+ +AKEQ+ LRKKVT+LMK  KL Q
Sbjct: 284  IGEAIEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQ 343

Query: 874  VRKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRT 1053
            VR IVK QD+SRPWGQ+ QAKVGSRLIEL M+TA+IQPP  Q +DG PDIRPAFRH +RT
Sbjct: 344  VRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRT 403

Query: 1054 ITKEQQKLSRRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSY 1233
            + KEQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSY
Sbjct: 404  VAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSY 463

Query: 1234 VMRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADL 1413
            VMR HG+RQQREAVKRAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL
Sbjct: 464  VMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADL 523

Query: 1414 IDREDIPLPEKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGF 1593
            +DR D+PLPEKP TEDE+              ENSERHSQRCDVELKLAVARKMKDEEGF
Sbjct: 524  VDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGF 583

Query: 1594 YYPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVD 1773
            YYPHNLDFRGRAYPMHPYL+HL SDLCRGILEFAEGRPLGKSGL WLKIHL  LY GGVD
Sbjct: 584  YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVD 643

Query: 1774 KLSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTT 1953
            KLSYDGR+AFTENH+E+IFDSADRPLEG+RWWLGAEDPFQCL VC+NL EALRSSSP+TT
Sbjct: 644  KLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETT 703

Query: 1954 ISHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAK 2133
            ISH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RVL+IM+ DA K
Sbjct: 704  ISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQK 763

Query: 2134 DPATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELF 2313
            DP+ +P+  RA+L++ QVDRKLVKQTVMTSVYGVTYVGAR+QIK+RLKERG I DE+ELF
Sbjct: 764  DPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELF 823

Query: 2314 SASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLG 2493
             ASCY AK TL AL EMFQ AR IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LG
Sbjct: 824  GASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLG 883

Query: 2494 RHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVH 2673
            RHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC   GLNFAGVH
Sbjct: 884  RHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVH 943

Query: 2674 DSYWTHACDVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            DSYWTHACDVD +N ILREKFVELY+ PILENLLESF+KSFP LKFPPLPERG +
Sbjct: 944  DSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDF 998


>gb|OQU90275.1| hypothetical protein SORBI_3002G378100 [Sorghum bicolor]
          Length = 976

 Score = 1372 bits (3552), Expect = 0.0
 Identities = 672/895 (75%), Positives = 762/895 (85%), Gaps = 17/895 (1%)
 Frame = +1

Query: 205  ADEAAEVQEMLEELKNVQVD---------SRSGYANGNNNRVR-RNLPRTQHRPL----- 339
            +++A E+   +EE+   Q           +    A G ++R R R   R +H  +     
Sbjct: 69   SEDAEELHHAIEEIVRAQPSQNLPRPQSVAEERQAPGRDHRSRHRRSGRGRHVEVMAAEH 128

Query: 340  GMGAGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFK 519
            GM   +Y  L+RRQI++ETEAWEQAAKEY+ELLADMCE+KLAPNLPY+KSLFLGWFEP +
Sbjct: 129  GMTYHRYTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLR 188

Query: 520  DEIVKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQ 699
            D+IV EQ+L ADP  + SH  YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ
Sbjct: 189  DQIVTEQELVADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 248

Query: 700  VGEAIEQEVRIHKFLEKTKKRPVKD-KKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQ 873
            +GEAIE EVRI++FLEKT+K+  K+ +K E+A  D+ +AKEQ+ LRKKVT+LMK  KL Q
Sbjct: 249  IGEAIEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQ 308

Query: 874  VRKIVKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRT 1053
            VR IVK QD+SRPWGQ+ QAKVGSRLIEL M+TA+IQPP  Q +DG PDIRPAFRH +RT
Sbjct: 309  VRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRT 368

Query: 1054 ITKEQQKLSRRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSY 1233
            + KEQQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSY
Sbjct: 369  VAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSY 428

Query: 1234 VMRVHGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADL 1413
            VMR HG+RQQREAVKRAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS+VDRIWSSGGRLADL
Sbjct: 429  VMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADL 488

Query: 1414 IDREDIPLPEKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGF 1593
            +DR D+PLPEKP TEDE+              ENSERHSQRCDVELKLAVARKMKDEEGF
Sbjct: 489  VDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGF 548

Query: 1594 YYPHNLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVD 1773
            YYPHNLDFRGRAYPMHPYL+HL SDLCRGILEFAEGRPLGKSGL WLKIHL  LY GGVD
Sbjct: 549  YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVD 608

Query: 1774 KLSYDGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTT 1953
            KLSYDGR+AFTENH+E+IFDSADRPLEG+RWWLGAEDPFQCL VC+NL EALRSSSP+TT
Sbjct: 609  KLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETT 668

Query: 1954 ISHTPVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAK 2133
            ISH PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVY+GIA RVL+IM+ DA K
Sbjct: 669  ISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQK 728

Query: 2134 DPATEPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELF 2313
            DP+ +P+  RA+L++ QVDRKLVKQTVMTSVYGVTYVGAR+QIK+RLKERG I DE+ELF
Sbjct: 729  DPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELF 788

Query: 2314 SASCYMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLG 2493
             ASCY AK TL AL EMFQ AR IMNWLGDCAK+IA EN+PVRWTTPLGLPVVQPYR+LG
Sbjct: 789  GASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLG 848

Query: 2494 RHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVH 2673
            RHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC   GLNFAGVH
Sbjct: 849  RHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVH 908

Query: 2674 DSYWTHACDVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            DSYWTHACDVD +N ILREKFVELY+ PILENLLESF+KSFP LKFPPLPERG +
Sbjct: 909  DSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDF 963


>ref|XP_022149021.1| DNA-directed RNA polymerase 1B, mitochondrial [Momordica charantia]
          Length = 982

 Score = 1372 bits (3551), Expect = 0.0
 Identities = 668/887 (75%), Positives = 760/887 (85%), Gaps = 8/887 (0%)
 Frame = +1

Query: 202  DADEAAEVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAMLKRRQ 381
            D   + E+QE++EEL   +             ++  +  + +    GMG  KY ML++RQ
Sbjct: 97   DLSGSEEIQELMEELTKQE-------------KLEHHFKQPKRMVDGMGVSKYNMLRKRQ 143

Query: 382  IKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPK 561
            +K+ETEAWE+AA+EY+ELL DMCE+KLAPNLPYVKSLFLGWFEP +D I  +Q+ C D K
Sbjct: 144  VKMETEAWEEAAREYQELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAIAADQEYCKDKK 203

Query: 562  CKLSHRQYFDKLPAEMMAVITMHKLMSLLMTG-GGDGSVRVVQAACQVGEAIEQEVRIHK 738
             ++SH  YFD +PA+MMAVITMHKLM LLMT  GG+GSVRVVQAACQ+GEAIE EVRIHK
Sbjct: 204  NRVSHAPYFDLIPADMMAVITMHKLMGLLMTNSGGNGSVRVVQAACQIGEAIEHEVRIHK 263

Query: 739  FLEKTKKRPVKDKKNEDAEADSVA-------KEQEFLRKKVTNLMKMNKLHQVRKIVKGQ 897
            F EKTKK+ V +K N +AEAD VA       KEQ+ LRKKVT LMK  KL QVR IVK Q
Sbjct: 264  FFEKTKKKNVNEK-NTEAEADPVAEEQEKLAKEQDKLRKKVTKLMKKQKLQQVRMIVKEQ 322

Query: 898  DDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKL 1077
            DD +PWGQ+A  KVG RL++LLMETAYIQPP+DQ  +GPPDIRPAF HTL+TIT+E QK 
Sbjct: 323  DDLKPWGQDAHVKVGCRLMQLLMETAYIQPPIDQLGNGPPDIRPAFVHTLKTITREAQKT 382

Query: 1078 SRRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSR 1257
            SRRYGVIECD LVR+GL+KTARH VIPY+PMLVPP+ WTGYD+GA+ FLPSYVMR+HG++
Sbjct: 383  SRRYGVIECDPLVRRGLEKTARHTVIPYLPMLVPPLNWTGYDKGAYLFLPSYVMRIHGAK 442

Query: 1258 QQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPL 1437
            QQREAVKRAPKKQL+ VFEALDTLG TKWRVNKRVLSV+DRIW+SGGRLADL+DRED+PL
Sbjct: 443  QQREAVKRAPKKQLEPVFEALDTLGRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPL 502

Query: 1438 PEKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDF 1617
            PE+P  +DE++             ENSERHSQRCD+ELKLAVARKMK+E+GFYYPHNLDF
Sbjct: 503  PEEPNVDDEAEIRKWKWKVKAAKKENSERHSQRCDIELKLAVARKMKEEDGFYYPHNLDF 562

Query: 1618 RGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRI 1797
            RGRAYPMHPYL+HL SDLCRG+LEFAEGRPLG+SGL WLKIHL  LY GGVDKLSY  R+
Sbjct: 563  RGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLYWLKIHLANLYAGGVDKLSYKDRV 622

Query: 1798 AFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQ 1977
            +FTENH+E+IFDSADRPLEG RWWLGAEDPFQCL VCINL+EALRS SP+TTISH PVHQ
Sbjct: 623  SFTENHLEEIFDSADRPLEGNRWWLGAEDPFQCLAVCINLSEALRSPSPETTISHMPVHQ 682

Query: 1978 DGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNA 2157
            DGSCNGLQHYAALGRD++GAAAVNLV GDKP DVYSGIA+RVLDIM+ DA KDPAT PNA
Sbjct: 683  DGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIASRVLDIMRSDAEKDPATNPNA 742

Query: 2158 LRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAK 2337
            L A+LLI+QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKER +I D+S+LF+ASCY AK
Sbjct: 743  LHARLLINQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERSSISDDSKLFAASCYAAK 802

Query: 2338 TTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSL 2517
            TTL AL EMF+ AR+IMNWLG+CAK+IASENQPVRWTTPLGLPVVQPYR+LGRHLIKTSL
Sbjct: 803  TTLTALGEMFEAARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSL 862

Query: 2518 QVLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHAC 2697
            QVLTLQRETD+VMVKRQ+TAFPPNFVHSLD SHMMMTAVAC  AGLNFAGVHDSYWTHAC
Sbjct: 863  QVLTLQRETDQVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHAC 922

Query: 2698 DVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            DVD++N ILREKFVELYE PILENLLE+FQKSFPTLKFPPLP+RG +
Sbjct: 923  DVDEMNRILREKFVELYEAPILENLLENFQKSFPTLKFPPLPDRGDF 969


>ref|XP_004956403.1| DNA-directed RNA polymerase 1B, mitochondrial [Setaria italica]
          Length = 1005

 Score = 1367 bits (3538), Expect = 0.0
 Identities = 667/891 (74%), Positives = 759/891 (85%), Gaps = 13/891 (1%)
 Frame = +1

Query: 205  ADEAAEVQEMLEELKNVQ--------VDSRSGYANGNNNRVRRNLPRTQHRPL----GMG 348
            ++EA E+   LE ++           ++ +      + +R RRN    Q +      GM 
Sbjct: 102  SEEAEELHHALEIVRTQPNQNQPPPPMEEQRASGRDHRDRHRRNRRGQQAQVAAEEHGMT 161

Query: 349  AGKYAMLKRRQIKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEI 528
              KYA L+RRQI++ETEAWEQAAKEY+ELL DMCE+KLAPNLPY+KSLFLGWFEP +D+I
Sbjct: 162  YHKYASLRRRQIRVETEAWEQAAKEYRELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDQI 221

Query: 529  VKEQQLCADPKCKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGE 708
              EQ+L A+   + SH  YF+ LPA+MMAVITMHKLM LLMTG GDGSVRV+QAACQ+GE
Sbjct: 222  AAEQELVANRGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGE 281

Query: 709  AIEQEVRIHKFLEKTKKRPVKDKKNEDAEADS-VAKEQEFLRKKVTNLMKMNKLHQVRKI 885
            AIE EVRIH+FLEKT+K+  K+K+NE+   DS +AKEQ+ LRKKVT+LMK  KL QVRKI
Sbjct: 282  AIEHEVRIHRFLEKTRKKSNKEKENEEEIFDSDIAKEQQRLRKKVTDLMKKQKLRQVRKI 341

Query: 886  VKGQDDSRPWGQEAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKE 1065
            VK QDDSRPWGQ+A AKVGSRLIEL +ETA+IQPP  Q +DG PDIRPAFRH +RT+ KE
Sbjct: 342  VKNQDDSRPWGQDAHAKVGSRLIELFIETAHIQPPASQSSDGLPDIRPAFRHEMRTVPKE 401

Query: 1066 QQKLSRRYGVIECDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRV 1245
            QQK SRRYGVI+CD LVRQGLD+TA+HMVIPYMPML+PP+ WTGYD+GAH FLPSYVMR 
Sbjct: 402  QQKHSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSYVMRT 461

Query: 1246 HGSRQQREAVKRAPKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDRE 1425
            HG+RQQREAVKRAP++Q+Q+VFEAL+TLGSTKWRVNKRVLS++DRIWSSGGRLADL+DR 
Sbjct: 462  HGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIIDRIWSSGGRLADLVDRT 521

Query: 1426 DIPLPEKPYTEDESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPH 1605
            D+PLPEKP TEDE+               NSERHSQRCDVELKLAVARKMKDEEGFYYPH
Sbjct: 522  DVPLPEKPDTEDETVLKKWRWHTRSVKKGNSERHSQRCDVELKLAVARKMKDEEGFYYPH 581

Query: 1606 NLDFRGRAYPMHPYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSY 1785
            NLDFRGRAYPMHPYL+HL SDLCRG+LEFAEGRPLG+SGLRWLKIHL  LY GGVDKLSY
Sbjct: 582  NLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLRWLKIHLANLYAGGVDKLSY 641

Query: 1786 DGRIAFTENHMEDIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHT 1965
             GRIAF ENH+E+IFDSADRPLEG+RWWLGAEDPFQCL VC+NL EALRS SP+ TISH 
Sbjct: 642  AGRIAFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSPSPEATISHI 701

Query: 1966 PVHQDGSCNGLQHYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPAT 2145
            PVHQDGSCNGLQHYAALGRD++GA AVNLV G+KP DVYSGIA RV++IM+RD+ KDP+T
Sbjct: 702  PVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIATRVVEIMRRDSQKDPST 761

Query: 2146 EPNALRAKLLISQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASC 2325
            +P+A RA+L++ QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLKERG I D++ELF ASC
Sbjct: 762  DPDAARARLILDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIADDAELFGASC 821

Query: 2326 YMAKTTLIALEEMFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLI 2505
            Y AK TL AL EMFQ AR+IMNWLGDCAK+IA EN+PV+WTTPLGLPVVQPYR+LGRHLI
Sbjct: 822  YAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVKWTTPLGLPVVQPYRKLGRHLI 881

Query: 2506 KTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYW 2685
            KTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLD SHMMMTAVAC   GLNFAGVHDSYW
Sbjct: 882  KTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYW 941

Query: 2686 THACDVDQLNVILREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            THACDVD +N ILREKFVELY+ PILENLLESF+KSFP LKFPPLPERG +
Sbjct: 942  THACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDF 992


>gb|OVA15329.1| DNA-directed RNA polymerase [Macleaya cordata]
          Length = 968

 Score = 1365 bits (3532), Expect = 0.0
 Identities = 668/879 (75%), Positives = 755/879 (85%)
 Frame = +1

Query: 202  DADEAAEVQEMLEELKNVQVDSRSGYANGNNNRVRRNLPRTQHRPLGMGAGKYAMLKRRQ 381
            D     E+Q +LEE+   +         GN    ++  P+      G+G GKY +L+RRQ
Sbjct: 89   DISAVDEIQGLLEEISKEE--------KGNLEFKQQKQPKLVG---GIGIGKYQLLRRRQ 137

Query: 382  IKIETEAWEQAAKEYKELLADMCERKLAPNLPYVKSLFLGWFEPFKDEIVKEQQLCADPK 561
            +KIETEAWEQAAKEYKELLADMCE+KLAPNLPY+KSLFLGWFEP +D I  EQ LC   K
Sbjct: 138  MKIETEAWEQAAKEYKELLADMCEQKLAPNLPYMKSLFLGWFEPLRDCITSEQDLCKQGK 197

Query: 562  CKLSHRQYFDKLPAEMMAVITMHKLMSLLMTGGGDGSVRVVQAACQVGEAIEQEVRIHKF 741
             + ++  YFD+LPAEMMAVITMHKLM LLMTGG  GS RVVQAACQ+GEAIE EVRI+ F
Sbjct: 198  NRAAYAPYFDQLPAEMMAVITMHKLMGLLMTGGEHGSARVVQAACQIGEAIEHEVRIYHF 257

Query: 742  LEKTKKRPVKDKKNEDAEADSVAKEQEFLRKKVTNLMKMNKLHQVRKIVKGQDDSRPWGQ 921
            LEKT+K+P KDK +E  E D  AKEQ  LRKKVTNLMK  KL QVR+IVKGQDD +PWGQ
Sbjct: 258  LEKTRKKPDKDK-DEGGEPDDAAKEQAKLRKKVTNLMKKQKLLQVRQIVKGQDDLKPWGQ 316

Query: 922  EAQAKVGSRLIELLMETAYIQPPVDQRADGPPDIRPAFRHTLRTITKEQQKLSRRYGVIE 1101
            +AQAKVGSRLIELL+++AYIQPPVDQ ADGPP+IRPAFRH+L+T+TKE QK SRRYGVIE
Sbjct: 317  DAQAKVGSRLIELLIQSAYIQPPVDQLADGPPEIRPAFRHSLKTVTKETQKASRRYGVIE 376

Query: 1102 CDLLVRQGLDKTARHMVIPYMPMLVPPMKWTGYDQGAHFFLPSYVMRVHGSRQQREAVKR 1281
            CD LVRQGL++TARHMVIPYMPMLVPP  W GYD+GA+ FLPSYVMR HGSRQQREA+K+
Sbjct: 377  CDPLVRQGLERTARHMVIPYMPMLVPPDNWIGYDKGAYLFLPSYVMRTHGSRQQREAIKK 436

Query: 1282 APKKQLQAVFEALDTLGSTKWRVNKRVLSVVDRIWSSGGRLADLIDREDIPLPEKPYTED 1461
             P+KQL+ VFEALDTLG+TKWRVNKRVL V+DRIW+SGG LA+L+DRED PLP +P TED
Sbjct: 437  TPRKQLEPVFEALDTLGNTKWRVNKRVLGVIDRIWASGGGLANLVDREDKPLPLEPVTED 496

Query: 1462 ESQXXXXXXXXXXXXXENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMH 1641
            +++             ENSE+HSQRCDVELKLAVARKMKDE+GF+YPHNLDFRGRAYPMH
Sbjct: 497  DAEKRSWRWKVKDIKKENSEKHSQRCDVELKLAVARKMKDEDGFFYPHNLDFRGRAYPMH 556

Query: 1642 PYLSHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLTGLYGGGVDKLSYDGRIAFTENHME 1821
            PYL+HL SDLCRGILEFAEGRPLGKSGLRWLKIHL  LY  GVDKLSY+GRIAFTENH++
Sbjct: 557  PYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYACGVDKLSYEGRIAFTENHLD 616

Query: 1822 DIFDSADRPLEGRRWWLGAEDPFQCLGVCINLAEALRSSSPDTTISHTPVHQDGSCNGLQ 2001
            DIFDSADRPLEG+RWWL AEDPFQCL VCINL+EALRSSSP+TTISH PVHQDGSCNGLQ
Sbjct: 617  DIFDSADRPLEGKRWWLDAEDPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQ 676

Query: 2002 HYAALGRDEIGAAAVNLVDGDKPGDVYSGIAARVLDIMKRDAAKDPATEPNALRAKLLIS 2181
            HYAALGRD++GAAAVNLV G+KP DVYSGIA RVL+IM+ DA  DPA++ NALRA+LLI 
Sbjct: 677  HYAALGRDKLGAAAVNLVAGEKPADVYSGIAHRVLEIMRSDAQNDPASDSNALRARLLIK 736

Query: 2182 QVDRKLVKQTVMTSVYGVTYVGAREQIKKRLKERGAIEDESELFSASCYMAKTTLIALEE 2361
            QVDRKLVKQTVMTSVYGVTY+GAR+QIKKRLKER A  D++ELF A+CY AK TL AL E
Sbjct: 737  QVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERNAFADDAELFGAACYAAKVTLTALGE 796

Query: 2362 MFQGARNIMNWLGDCAKMIASENQPVRWTTPLGLPVVQPYRRLGRHLIKTSLQVLTLQRE 2541
            MF+ AR+IM+WLG+CAK+IASEN PVRWTTPLGLPVVQPYR+LGRHLIKTSLQVLTLQRE
Sbjct: 797  MFEAARSIMSWLGECAKVIASENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRE 856

Query: 2542 TDKVMVKRQKTAFPPNFVHSLDSSHMMMTAVACSEAGLNFAGVHDSYWTHACDVDQLNVI 2721
            TDKVMVKRQ+TAFPPNFVHSLD SHMMMTA+AC +AGLNFAGVHDSYWTHACDVD++N I
Sbjct: 857  TDKVMVKRQRTAFPPNFVHSLDGSHMMMTALACKKAGLNFAGVHDSYWTHACDVDEMNRI 916

Query: 2722 LREKFVELYEKPILENLLESFQKSFPTLKFPPLPERGTY 2838
            LREKFVELYE PILENLLESFQ+SFPT+ FPPLPERG +
Sbjct: 917  LREKFVELYETPILENLLESFQESFPTMHFPPLPERGDF 955