BLASTX nr result

ID: Ophiopogon27_contig00007835 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00007835
         (1231 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024260279.1| basic proline-rich protein-like [Oncorhynchu...    50   1e-06
ref|XP_010449482.1| PREDICTED: leucine-rich repeat extensin-like...    45   7e-06

>ref|XP_024260279.1| basic proline-rich protein-like [Oncorhynchus tshawytscha]
          Length = 985

 Score = 49.7 bits (117), Expect(3) = 1e-06
 Identities = 66/214 (30%), Positives = 84/214 (39%), Gaps = 13/214 (6%)
 Frame = -2

Query: 849 ATASLQSVPGRAPPSTGGRR-------LPAAHDAGVPGLFPARISH*SSYP*RLHPLFLA 691
           A+ + +  P R PP+   R        LP A       L PA            H L  A
Sbjct: 380 ASPAPEPAPARQPPARRARPRSARPPPLPRALPLSANALAPA------------HLLSPA 427

Query: 690 PA*IHAGDRSHHAASSLDRRTSHSPDGLRLRHL*QPHDQ--RRPTAARLDTDILSIPPAL 517
           PA      R+ H A    RR+S +P   +     +P  +  RR T AR            
Sbjct: 428 PAPSLPPPRTRHLA----RRSSPAPAPRQPVRPDRPRARLPRRRTRAR------------ 471

Query: 516 P*ARSTSPSVPTSQPATLDLIGAPSP---AGPLLRQPSMTPPQHRSSPLTL-RAGSPNSS 349
           P AR+T P     +P  L L   PSP   A PL   PS +PP H+SSP  L RA    + 
Sbjct: 472 PRARATRPP----RPRALTLFPPPSPRSLAPPLSLAPSASPP-HQSSPSPLPRAARQQAR 526

Query: 348 GFAGPDSPGLDPSDRSRRCPAEQRAASTHRRAAP 247
           G+  P +P      +S     E RAA  H   AP
Sbjct: 527 GYPPPPAPARQHPRQSPSTANETRAAPAHALPAP 560



 Score = 26.2 bits (56), Expect(3) = 1e-06
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 212 SIPLSGSESPSFPRDRSHRHGYPRVAPSSSQRRCPVSWLQPPT--PAAPFDS 63
           S+PL+ S +P     R+     PR   ++ +RR P +  QPP   PA P  S
Sbjct: 591 SLPLARSPAPCPRPARAPPSPAPRRPDTAPRRRPPPARPQPPAQPPARPLSS 642



 Score = 25.8 bits (55), Expect(3) = 1e-06
 Identities = 19/53 (35%), Positives = 23/53 (43%)
 Frame = -3

Query: 1112 PRVPLPFVRAQPPPDHLRQPPHQAVPPQPRLLCSLRRSPPQAWP*PQCALKPP 954
            PR P     A+PPP     P  Q  P  P  L SL  +P  A P    + +PP
Sbjct: 305  PRRPARTRPARPPPPQGPDPSRQP-PLPPATLPSLAPAPAPAAPRLSPSPRPP 356


>ref|XP_010449482.1| PREDICTED: leucine-rich repeat extensin-like protein 5 [Camelina
           sativa]
          Length = 825

 Score = 44.7 bits (104), Expect(3) = 7e-06
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
 Frame = -2

Query: 528 PPALP*ARSTSPSVPTSQPATLDLIGAP--SPAGPLLRQPSMTPPQHRSSPLTLRAGSPN 355
           PP  P +  ++P  P S P+T    G+P  +P  P +  PS  PP    SP +   GSP 
Sbjct: 471 PPGTPGSPPSTPGTPGSPPSTPGTPGSPPSAPGSPPITVPS--PPSTPGSPPSSTPGSPP 528

Query: 354 SSGFAGPDSPGLDPS 310
           S+  + P +PG  PS
Sbjct: 529 STPGSPPSTPGSPPS 543



 Score = 28.5 bits (62), Expect(3) = 7e-06
 Identities = 21/55 (38%), Positives = 26/55 (47%)
 Frame = -3

Query: 806 QPAVVACQPPTTPASPASFRHASATDRATPDASTRCSSLQPRSTPAIAVTTPPHP 642
           +P VV   PPTTP SP S      +  +TP  S   +   P STP    +TP  P
Sbjct: 412 RPPVVVPSPPTTP-SPGSPPITVPSPPSTP-GSPPITVPSPPSTPGSPPSTPGSP 464



 Score = 25.8 bits (55), Expect(3) = 7e-06
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -3

Query: 215 PSIPLSGSESPSFPRDRSHRHGYPRVAPSSSQRRCPVSWLQPPTPAAP 72
           PS P S   +P  P         P ++PS      P S   PPTP +P
Sbjct: 549 PSTPGSPPSTPGTPPSTPGSPPSPSISPS------PPSPSSPPTPVSP 590


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