BLASTX nr result

ID: Ophiopogon27_contig00007776 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00007776
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020245579.1| helicase-like transcription factor CHR28 iso...   106   6e-24
ref|XP_020245578.1| helicase-like transcription factor CHR28 iso...   106   6e-24
ref|XP_020245577.1| helicase-like transcription factor CHR28 iso...   106   6e-24
ref|XP_020245573.1| helicase-like transcription factor CHR28 iso...   106   6e-24
ref|XP_020245575.1| helicase-like transcription factor CHR28 iso...    82   3e-15

>ref|XP_020245579.1| helicase-like transcription factor CHR28 isoform X5 [Asparagus
           officinalis]
          Length = 964

 Score =  106 bits (264), Expect = 6e-24
 Identities = 61/136 (44%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKPSEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y EHTQ+  LP SFQS  SKPSEHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHEHTQRRILPYSFQSFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 149

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 150 NYSRKFDNKSFQNAQK 165


>ref|XP_020245578.1| helicase-like transcription factor CHR28 isoform X4 [Asparagus
           officinalis]
          Length = 974

 Score =  106 bits (264), Expect = 6e-24
 Identities = 61/136 (44%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKPSEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y EHTQ+  LP SFQS  SKPSEHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHEHTQRRILPYSFQSFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 149

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 150 NYSRKFDNKSFQNAQK 165


>ref|XP_020245577.1| helicase-like transcription factor CHR28 isoform X3 [Asparagus
           officinalis]
 gb|ONK58327.1| uncharacterized protein A4U43_C09F11060 [Asparagus officinalis]
          Length = 982

 Score =  106 bits (264), Expect = 6e-24
 Identities = 61/136 (44%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKPSEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y EHTQ+  LP SFQS  SKPSEHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHEHTQRRILPYSFQSFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 149

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 150 NYSRKFDNKSFQNAQK 165


>ref|XP_020245573.1| helicase-like transcription factor CHR28 isoform X1 [Asparagus
           officinalis]
 ref|XP_020245574.1| helicase-like transcription factor CHR28 isoform X1 [Asparagus
           officinalis]
          Length = 996

 Score =  106 bits (264), Expect = 6e-24
 Identities = 61/136 (44%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKPSEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y EHTQ+  LP SFQS  SKPSEHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHEHTQRRILPYSFQSFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 149

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 150 NYSRKFDNKSFQNAQK 165


>ref|XP_020245575.1| helicase-like transcription factor CHR28 isoform X2 [Asparagus
           officinalis]
          Length = 984

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 53/136 (38%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
 Frame = -3

Query: 404 EMNFQNYPI--SNDTASHPEXXXXXSRLIEVRDVNLGDNTRSNRRGETSCMSEGVSYAQQ 231
           EMNFQNYP   +ND +++PE      +  E+  +NLG+  RSN  G TS ++       Q
Sbjct: 30  EMNFQNYPRLNNNDNSAYPESSTSSKKWAEIPVMNLGNTNRSNGIGGTSHVAYETPSGPQ 89

Query: 230 FNAYGEHTQKGTLPSSFQSCTSKPSEHSTRFHKGPSVSQQREPIQVKLVNGSEVDLSNMA 51
            N Y E            S  SKPSEHS+R   G + SQQ+EP +        VDLSN  
Sbjct: 90  LNGYHE------------SFNSKPSEHSSRARGGTAHSQQKEPNRAPSSGSPVVDLSNTD 137

Query: 50  NYRSKIEKKLAQPMQK 3
           NY  K + K  Q  QK
Sbjct: 138 NYSRKFDNKSFQNAQK 153


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