BLASTX nr result

ID: Ophiopogon27_contig00007684 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00007684
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276941.1| protein PAF1 homolog [Asparagus officinalis]...   108   5e-25
ref|XP_008796955.1| PREDICTED: protein PAF1 homolog [Phoenix dac...    72   8e-12
ref|XP_010934933.2| PREDICTED: LOW QUALITY PROTEIN: protein PAF1...    72   1e-11
ref|XP_010941164.1| PREDICTED: LOW QUALITY PROTEIN: protein PAF1...    69   1e-10
ref|XP_009391055.1| PREDICTED: protein PAF1 homolog [Musa acumin...    67   6e-10
gb|OVA15607.1| RNA polymerase II-associated [Macleaya cordata]         66   1e-09
gb|OUZ99272.1| RNA polymerase II-associated [Macleaya cordata]         66   1e-09
gb|PKA50121.1| hypothetical protein AXF42_Ash019640 [Apostasia s...    63   1e-08
ref|XP_020080615.1| protein PAF1 homolog, partial [Ananas comosus]     53   5e-06

>ref|XP_020276941.1| protein PAF1 homolog [Asparagus officinalis]
 gb|ONK59004.1| uncharacterized protein A4U43_C08F1980 [Asparagus officinalis]
          Length = 459

 Score =  108 bits (271), Expect = 5e-25
 Identities = 56/85 (65%), Positives = 60/85 (70%)
 Frame = -2

Query: 443 KAKEGRSRDEVEHYPVPSXXXXXXXXXXXXXXRKGSAGTSSNPDNGDITDLKRGRSLREY 264
           KAKEGRS DEVEHYPVPS              +K SAGTSSN   GD+T LK  RS R+Y
Sbjct: 375 KAKEGRSGDEVEHYPVPSSVTVRKRPTVAVVEQKESAGTSSNNGTGDVTGLKHDRSFRDY 434

Query: 263 ESGARDKIPRMDSIDQFSGEEDMSD 189
           ESG R KIPRMDS+DQFSGEEDMSD
Sbjct: 435 ESGTRHKIPRMDSMDQFSGEEDMSD 459


>ref|XP_008796955.1| PREDICTED: protein PAF1 homolog [Phoenix dactylifera]
          Length = 583

 Score = 72.0 bits (175), Expect = 8e-12
 Identities = 38/85 (44%), Positives = 49/85 (57%)
 Frame = -2

Query: 443 KAKEGRSRDEVEHYPVPSXXXXXXXXXXXXXXRKGSAGTSSNPDNGDITDLKRGRSLREY 264
           +AKEGR  DE+EH+PVP+               K S  TS   D  DI  LKRGR  R+ 
Sbjct: 499 RAKEGRFGDEIEHFPVPARVTVRGRSAVAVGELKESGETSVKKDQVDIMSLKRGRFSRDD 558

Query: 263 ESGARDKIPRMDSIDQFSGEEDMSD 189
           +   ++K+ R+D +DQFSGEEDM D
Sbjct: 559 DFERQNKLARVDDMDQFSGEEDMYD 583


>ref|XP_010934933.2| PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homolog [Elaeis
           guineensis]
          Length = 734

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 38/85 (44%), Positives = 48/85 (56%)
 Frame = -2

Query: 443 KAKEGRSRDEVEHYPVPSXXXXXXXXXXXXXXRKGSAGTSSNPDNGDITDLKRGRSLREY 264
           +AKEGR  DE+EH+PVP+               K S  TS   D  DI  LKRGR  R+ 
Sbjct: 650 RAKEGRFGDEIEHFPVPARVTVRRRSAVAVGELKESGETSVKKDQVDILSLKRGRFSRDD 709

Query: 263 ESGARDKIPRMDSIDQFSGEEDMSD 189
           +    +K+ R+D +DQFSGEEDM D
Sbjct: 710 DFERENKLARVDDMDQFSGEEDMYD 734


>ref|XP_010941164.1| PREDICTED: LOW QUALITY PROTEIN: protein PAF1 homolog [Elaeis
           guineensis]
          Length = 732

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 37/85 (43%), Positives = 47/85 (55%)
 Frame = -2

Query: 443 KAKEGRSRDEVEHYPVPSXXXXXXXXXXXXXXRKGSAGTSSNPDNGDITDLKRGRSLREY 264
           +AKEGR  DE+EH+PVPS               K S   S   D  DI   KRGR  R+ 
Sbjct: 648 RAKEGRFGDEIEHFPVPSRVTVRRRSAVAIGELKESGEISVKKDQIDIMSSKRGRFSRDD 707

Query: 263 ESGARDKIPRMDSIDQFSGEEDMSD 189
           +   + ++ +MD +DQFSGEEDMSD
Sbjct: 708 DFERQHQLAQMDDVDQFSGEEDMSD 732


>ref|XP_009391055.1| PREDICTED: protein PAF1 homolog [Musa acuminata subsp. malaccensis]
          Length = 730

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 36/85 (42%), Positives = 46/85 (54%)
 Frame = -2

Query: 443 KAKEGRSRDEVEHYPVPSXXXXXXXXXXXXXXRKGSAGTSSNPDNGDITDLKRGRSLREY 264
           KAKEGRS DE+E +PVPS                     S N +  D+ ++KRGRS  + 
Sbjct: 646 KAKEGRSGDEIEQFPVPSRVTVRKKSTTTYGEPNEYGEASRNNEKLDVRNIKRGRSSMDD 705

Query: 263 ESGARDKIPRMDSIDQFSGEEDMSD 189
           +   + K  R + IDQFSGEEDMSD
Sbjct: 706 DLERQHKFQRTEDIDQFSGEEDMSD 730


>gb|OVA15607.1| RNA polymerase II-associated [Macleaya cordata]
          Length = 431

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -2

Query: 443 KAKEGRSRDEVEHYPVPSXXXXXXXXXXXXXXRKGSAGTSSNPDNGDITDLKRGRSLREY 264
           +AKEGRS DEVE+YPVPS               K S G S++   G+++ LKRGRS  E 
Sbjct: 348 RAKEGRSADEVEYYPVPSSVTVRKRPTVAAVELKDSGGYSNS--KGNMSSLKRGRSGTED 405

Query: 263 ESGARDKIPRMDSIDQFSGEED-MSD 189
             G R K+ R+  +D FSG ED MSD
Sbjct: 406 GLGIRHKVSRVHDMDNFSGAEDEMSD 431


>gb|OUZ99272.1| RNA polymerase II-associated [Macleaya cordata]
          Length = 651

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -2

Query: 443 KAKEGRSRDEVEHYPVPSXXXXXXXXXXXXXXRKGSAGTSSNPDNGDITDLKRGRSLREY 264
           +AKEGRS DEVE+YPVPS               K S G S++   G+++ LKRGRS  E 
Sbjct: 568 RAKEGRSADEVEYYPVPSSVTVRKRPTVAAVELKDSGGYSNS--KGNMSSLKRGRSGTED 625

Query: 263 ESGARDKIPRMDSIDQFSGEED-MSD 189
             G R K+ R+  +D FSG ED MSD
Sbjct: 626 GLGIRHKVSRVHDMDNFSGAEDEMSD 651


>gb|PKA50121.1| hypothetical protein AXF42_Ash019640 [Apostasia shenzhenica]
          Length = 710

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 37/83 (44%), Positives = 47/83 (56%)
 Frame = -2

Query: 443 KAKEGRSRDEVEHYPVPSXXXXXXXXXXXXXXRKGSAGTSSNPDNGDITDLKRGRSLREY 264
           KAKEGRS DEVEHYPVPS                 +  TS NPDN DI + K+ R  RE 
Sbjct: 628 KAKEGRSGDEVEHYPVPSGITVRRRESVAIAEVIDTGRTSLNPDNVDIRNSKKARFSRED 687

Query: 263 ESGARDKIPRMDSIDQFSGEEDM 195
           +S   +   +++S D FSGE+D+
Sbjct: 688 DSDYGN--AQIESTDHFSGEDDI 708


>ref|XP_020080615.1| protein PAF1 homolog, partial [Ananas comosus]
          Length = 120

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 33/85 (38%), Positives = 40/85 (47%)
 Frame = -2

Query: 443 KAKEGRSRDEVEHYPVPSXXXXXXXXXXXXXXRKGSAGTSSNPDNGDITDLKRGRSLREY 264
           KAKEGRS D+VEH+PVPS               K     S   +  D  + KR RS  + 
Sbjct: 36  KAKEGRSGDDVEHFPVPSRITVRRKSAVAVIENKELEEISRKHEKADDRNSKRQRSFDDD 95

Query: 263 ESGARDKIPRMDSIDQFSGEEDMSD 189
           +   R         DQFSGE+DMSD
Sbjct: 96  DDMERQHKYMHTDGDQFSGEDDMSD 120


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