BLASTX nr result

ID: Ophiopogon27_contig00007669 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00007669
         (355 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020254412.1| cytochrome b-c1 complex subunit Rieske-4, mi...    76   5e-14
ref|XP_020245412.1| cytochrome b-c1 complex subunit Rieske-4, mi...    73   6e-13
gb|ONK58632.1| uncharacterized protein A4U43_C09F15050 [Asparagu...    73   2e-12
ref|XP_010929694.1| PREDICTED: cytochrome b-c1 complex subunit R...    54   4e-06

>ref|XP_020254412.1| cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like
           [Asparagus officinalis]
 gb|ONK78139.1| uncharacterized protein A4U43_C02F14750 [Asparagus officinalis]
          Length = 276

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 46/79 (58%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = +2

Query: 122 MLRVAGRRLTXXXXXXXXXXXXXXXXXXXKN-TIHGDRSSEESRSHVDSPMRRLMEAGLV 298
           MLR+AGRRL+                   KN  IHGDRS EES+  VD PMRRL++AGL+
Sbjct: 1   MLRLAGRRLSSPSWRSAPASSSSFFAS--KNPVIHGDRS-EESKIDVDFPMRRLIDAGLI 57

Query: 299 GSVRGFATDTLAPRQQQDL 355
           GS RGFATD+LAPRQQQDL
Sbjct: 58  GSARGFATDSLAPRQQQDL 76


>ref|XP_020245412.1| cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like,
           partial [Asparagus officinalis]
          Length = 258

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 33/46 (71%), Positives = 41/46 (89%)
 Frame = +2

Query: 218 IHGDRSSEESRSHVDSPMRRLMEAGLVGSVRGFATDTLAPRQQQDL 355
           + GDRS ++SR+ +DSP RRL++AGL+GS RGFATDTLAPRQQQDL
Sbjct: 13  VAGDRSPDDSRTSLDSPRRRLIDAGLIGSARGFATDTLAPRQQQDL 58


>gb|ONK58632.1| uncharacterized protein A4U43_C09F15050 [Asparagus officinalis]
          Length = 454

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 33/46 (71%), Positives = 41/46 (89%)
 Frame = +2

Query: 218 IHGDRSSEESRSHVDSPMRRLMEAGLVGSVRGFATDTLAPRQQQDL 355
           + GDRS ++SR+ +DSP RRL++AGL+GS RGFATDTLAPRQQQDL
Sbjct: 209 VAGDRSPDDSRTSLDSPRRRLIDAGLIGSARGFATDTLAPRQQQDL 254


>ref|XP_010929694.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-4,
           mitochondrial-like [Elaeis guineensis]
          Length = 279

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = +2

Query: 122 MLRVAGRRLTXXXXXXXXXXXXXXXXXXXKNTIHGDRSS--EESRSHVDSPMRRLMEAGL 295
           MLR+AGRRL                    +N IHGD  S  +++RS   SP R   E+GL
Sbjct: 1   MLRLAGRRLVAASSLRPSAAATASSSLLSRNPIHGDPLSARDDARSPAASPARIAFESGL 60

Query: 296 VGSVRGFATDTLAPRQQ 346
           +G+ RGF+T++L PR Q
Sbjct: 61  LGATRGFSTESLIPRHQ 77


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