BLASTX nr result

ID: Ophiopogon27_contig00007281 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00007281
         (868 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY89341.1| RNA polymerase II largest subunit, partial [Rhodo...   548   0.0  
gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar...   561   0.0  
gb|ACD63086.1| RNA polymerase II largest subunit, partial [Lirio...   560   0.0  
gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papav...   559   0.0  
gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illic...   559   0.0  
gb|ACD63083.1| RNA polymerase II largest subunit, partial [Cerat...   557   0.0  
gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magno...   557   0.0  
gb|ACD63082.1| RNA polymerase II largest subunit, partial [Beta ...   557   0.0  
gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antir...   547   0.0  
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As...   574   0.0  
gb|ACD63089.1| RNA polymerase II largest subunit, partial [Perse...   551   0.0  
gb|ACD63091.1| RNA polymerase II largest subunit, partial [Sarum...   550   0.0  
gb|AAQ08517.1| RNA polymerase II largest subunit, partial [Nymph...   549   0.0  
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo...   540   0.0  
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend...   560   0.0  
gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Ambor...   546   0.0  
gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicot...   545   0.0  
emb|CBI18915.3| unnamed protein product, partial [Vitis vinifera]     559   0.0  
gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimy...   543   0.0  
gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solan...   536   0.0  

>gb|AAY89341.1| RNA polymerase II largest subunit, partial [Rhododendron
           macrophyllum]
          Length = 589

 Score =  548 bits (1411), Expect = 0.0
 Identities = 273/289 (94%), Positives = 282/289 (97%)
 Frame = +1

Query: 1   GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
           GKQVFNLIIPKQINLLRTSAWH+ESETG ITPGDT VRIEKGE++TGTLCK+TLGTSTGS
Sbjct: 96  GKQVFNLIIPKQINLLRTSAWHAESETGPITPGDTHVRIEKGEVITGTLCKKTLGTSTGS 155

Query: 181 LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
           LIHVIWEEVGPDAARKFLGHTQ LVNYWLLQ+ FSIGIGDTIADAATMEKINETISKAKN
Sbjct: 156 LIHVIWEEVGPDAARKFLGHTQRLVNYWLLQSGFSIGIGDTIADAATMEKINETISKAKN 215

Query: 361 DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
           +VKDLI+ AQDKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVT
Sbjct: 216 EVKDLIRAAQDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVT 275

Query: 541 AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
           AGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 276 AGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 335

Query: 721 TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
           TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 336 TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 384


>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
          Length = 1009

 Score =  561 bits (1447), Expect = 0.0
 Identities = 282/289 (97%), Positives = 285/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL R SAWHSESETGFITPGDTQVRIEKGELLTGTLCK+TLGTSTGS
Sbjct: 507  GKQVFNLIIPKQINLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLGTSTGS 566

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIW  VGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN
Sbjct: 567  LIHVIW--VGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 624

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            DVKDLIKLAQDKQLEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 625  DVKDLIKLAQDKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 684

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 685  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 744

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFF+AMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 745  TPQEFFFYAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 793


>gb|ACD63086.1| RNA polymerase II largest subunit, partial [Liriodendron tulipifera]
          Length = 1010

 Score =  560 bits (1442), Expect = 0.0
 Identities = 277/289 (95%), Positives = 284/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLGTSTGS
Sbjct: 506  GKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGS 565

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN
Sbjct: 566  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKN 625

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LIK AQDKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 626  EVKELIKAAQDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 685

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 686  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 745

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 746  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papaver orientale]
          Length = 1010

 Score =  559 bits (1441), Expect = 0.0
 Identities = 275/289 (95%), Positives = 285/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINLLRTSAWHSE+ETGFITPGDTQVRIE+GELLTGTLCK+ LGTSTGS
Sbjct: 506  GKQVFNLIIPKQINLLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGS 565

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TISKAKN
Sbjct: 566  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKN 625

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VKDLI++AQ+K LEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 626  EVKDLIRMAQEKSLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 685

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 686  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 745

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 746  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illicium parviflorum]
          Length = 1013

 Score =  559 bits (1440), Expect = 0.0
 Identities = 277/289 (95%), Positives = 284/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+RTSAWHSESETGFITPGDT VRIEKGELL+GTLCK+TLGTSTGS
Sbjct: 509  GKQVFNLIIPKQINLIRTSAWHSESETGFITPGDTHVRIEKGELLSGTLCKKTLGTSTGS 568

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN
Sbjct: 569  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKN 628

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 629  EVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 688

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 689  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 748

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 749  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797


>gb|ACD63083.1| RNA polymerase II largest subunit, partial [Ceratophyllum demersum]
          Length = 1010

 Score =  557 bits (1435), Expect = 0.0
 Identities = 275/289 (95%), Positives = 284/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLGTSTGS
Sbjct: 506  GKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGS 565

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKAKN
Sbjct: 566  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKAKN 625

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 626  EVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 685

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 686  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 745

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 746  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
          Length = 1010

 Score =  557 bits (1435), Expect = 0.0
 Identities = 275/289 (95%), Positives = 284/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLGTSTGS
Sbjct: 506  GKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGS 565

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKAKN
Sbjct: 566  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKAKN 625

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 626  EVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 685

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 686  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 745

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 746  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>gb|ACD63082.1| RNA polymerase II largest subunit, partial [Beta vulgaris]
          Length = 1012

 Score =  557 bits (1435), Expect = 0.0
 Identities = 275/289 (95%), Positives = 284/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLGTSTGS
Sbjct: 508  GKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGS 567

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKAKN
Sbjct: 568  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKAKN 627

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 628  EVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 687

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 688  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 747

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 748  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 796


>gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antirrhinum majus]
          Length = 780

 Score =  547 bits (1409), Expect = 0.0
 Identities = 271/289 (93%), Positives = 278/289 (96%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINLLR SAWH E E GFITPGDTQVRIEKGELLTGTLCK+TLGT TGS
Sbjct: 264  GKQVFNLIIPKQINLLRYSAWHQEKEKGFITPGDTQVRIEKGELLTGTLCKKTLGTGTGS 323

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI  AKN
Sbjct: 324  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIQNAKN 383

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LI+ AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSE NNLKAMVT
Sbjct: 384  EVKELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSEHNNLKAMVT 443

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 444  AGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 503

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 504  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 552


>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
 gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
          Length = 1843

 Score =  574 bits (1479), Expect = 0.0
 Identities = 286/289 (98%), Positives = 287/289 (99%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL R SAWHSESETGFITPGDTQVRIEKGELLTGTLCK+TLGTSTGS
Sbjct: 588  GKQVFNLIIPKQINLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLGTSTGS 647

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN
Sbjct: 648  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 707

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 708  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 767

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 768  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 827

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 828  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 876


>gb|ACD63089.1| RNA polymerase II largest subunit, partial [Persea americana]
          Length = 1009

 Score =  551 bits (1421), Expect = 0.0
 Identities = 274/289 (94%), Positives = 280/289 (96%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+ TSAWHSESETGFITPGDTQVRIEKGELL GTLCK+TLGTSTGS
Sbjct: 505  GKQVFNLIIPKQINLIXTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGS 564

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI KAK+
Sbjct: 565  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKS 624

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VKDLIK AQ+K LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 625  EVKDLIKAAQEKSLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 684

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGF GRTLPHFTKDDYGPE RGFVENSYLRGL
Sbjct: 685  AGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPEXRGFVENSYLRGL 744

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 745  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 793


>gb|ACD63091.1| RNA polymerase II largest subunit, partial [Saruma henryi]
          Length = 1009

 Score =  550 bits (1416), Expect = 0.0
 Identities = 272/289 (94%), Positives = 282/289 (97%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINLLRTSAWH+ESETGFITPGDTQVRIE+GELL GTLCK+ LGTSTGS
Sbjct: 505  GKQVFNLIIPKQINLLRTSAWHAESETGFITPGDTQVRIERGELLAGTLCKKALGTSTGS 564

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKIN+TI+KAKN
Sbjct: 565  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINDTITKAKN 624

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LIK A +KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 625  EVKELIKAAHEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 684

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFT+DD GPESRGFVENSYLRGL
Sbjct: 685  AGSKGSFINISQMTACVGQQNVEGKRIPYGFINRTLPHFTQDDNGPESRGFVENSYLRGL 744

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 745  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 793


>gb|AAQ08517.1| RNA polymerase II largest subunit, partial [Nymphaea odorata]
          Length = 1013

 Score =  549 bits (1415), Expect = 0.0
 Identities = 271/289 (93%), Positives = 284/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+R SAWHSESETGFITPGDT VRIE+GELL+GTLCK+T+GTS+GS
Sbjct: 509  GKQVFNLIIPKQINLIRYSAWHSESETGFITPGDTCVRIERGELLSGTLCKKTMGTSSGS 568

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISKAKN
Sbjct: 569  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKN 628

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQ+SLSESNNLKAMVT
Sbjct: 629  EVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAMVT 688

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 689  AGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 748

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 749  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797


>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
          Length = 804

 Score =  540 bits (1391), Expect = 0.0
 Identities = 268/287 (93%), Positives = 277/287 (96%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPK INL+R SAWHSE+ETGFITPGDT VRIEKGELL+GTLCK+TLGTSTGS
Sbjct: 518  GKQVFNLIIPKPINLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGS 577

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATM KINETISKAK+
Sbjct: 578  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMVKINETISKAKD 637

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            DVK+LI  A DKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 638  DVKELIMQAHDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 697

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 698  AGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 757

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGT 861
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDI+VKYDGT
Sbjct: 758  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIIVKYDGT 804


>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
          Length = 1516

 Score =  560 bits (1442), Expect = 0.0
 Identities = 275/289 (95%), Positives = 285/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+R SAWH+ESETGFITPGDTQVRIE+GELL+GTLCK+T+GTSTGS
Sbjct: 650  GKQVFNLIIPKQINLIRFSAWHAESETGFITPGDTQVRIERGELLSGTLCKKTMGTSTGS 709

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIAD ATMEKINETISKAKN
Sbjct: 710  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADVATMEKINETISKAKN 769

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            DVK+LIK AQ+KQLEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 770  DVKELIKQAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 829

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGF+GRTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 830  AGSKGSFINISQMTACVGQQNVEGKRIPYGFLGRTLPHFTKDDYGPESRGFVENSYLRGL 889

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 890  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 938


>gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Amborella trichopoda]
          Length = 1013

 Score =  546 bits (1406), Expect = 0.0
 Identities = 271/289 (93%), Positives = 282/289 (97%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+R SAWHSESE+GFITPGDT VRIE+GELL+GTLCK+TLGTS+GS
Sbjct: 509  GKQVFNLIIPKQINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGS 568

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ AFSIGIGDTIADAATMEKINETISKAKN
Sbjct: 569  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKN 628

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 629  EVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 688

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 689  AGSKGSFINISQMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGL 748

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 749  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797


>gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicotiana tabacum]
          Length = 1010

 Score =  545 bits (1403), Expect = 0.0
 Identities = 271/289 (93%), Positives = 281/289 (97%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINLLR SAWH++SE G ITPGDTQVRIEKGELLTGTLCK+TLGTSTGS
Sbjct: 506  GKQVFNLIIPKQINLLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGS 565

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETIS AK+
Sbjct: 566  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKS 625

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
             VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVT
Sbjct: 626  KVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVT 685

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 686  AGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 745

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 746  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>emb|CBI18915.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1565

 Score =  559 bits (1440), Expect = 0.0
 Identities = 277/289 (95%), Positives = 284/289 (98%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELL GTLCK+TLGTSTGS
Sbjct: 635  GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGS 694

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKAKN
Sbjct: 695  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKN 754

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            +VK+LI+ AQ++QLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVT
Sbjct: 755  EVKELIRAAQERQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 814

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 815  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 874

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 875  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 923


>gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimys winteri]
          Length = 1010

 Score =  543 bits (1400), Expect = 0.0
 Identities = 270/289 (93%), Positives = 278/289 (96%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINL+R SAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLGTSTGS
Sbjct: 506  GKQVFNLIIPKQINLIRQSAWHSETETGFITPGDTQVRIERGELLCGTLCKKTLGTSTGS 565

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATM+ I+ETISKAKN
Sbjct: 566  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMDTISETISKAKN 625

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
            DVK+LI  AQDK LE EPGRTM ESFEN+VNQVLNKARDDAGSSAQ SLSESNNLKAMVT
Sbjct: 626  DVKELIMAAQDKALEAEPGRTMTESFENRVNQVLNKARDDAGSSAQNSLSESNNLKAMVT 685

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDD GPESRGFVENSYLRGL
Sbjct: 686  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDNGPESRGFVENSYLRGL 745

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 746  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solanum lycopersicum]
          Length = 773

 Score =  536 bits (1380), Expect = 0.0
 Identities = 266/289 (92%), Positives = 277/289 (95%)
 Frame = +1

Query: 1    GKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTSTGS 180
            GKQVFNLIIPKQINLLR S WH++SE G+ITPGDTQVRIEKGELL+GTLCK+TLGTSTGS
Sbjct: 264  GKQVFNLIIPKQINLLRYSVWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGS 323

Query: 181  LIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKN 360
            LIHVIW EVGPDAARKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETIS AK 
Sbjct: 324  LIHVIWXEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKA 383

Query: 361  DVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVT 540
             VK+LIK AQ+K LE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVT
Sbjct: 384  KVKELIKAAQEKLLEAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVT 443

Query: 541  AGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGL 720
            AGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGL
Sbjct: 444  AGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGL 503

Query: 721  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 867
            TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 504  TPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 552


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