BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00007280
         (885 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar...   574   0.0  
gb|AAY89341.1| RNA polymerase II largest subunit, partial [Rhodo...   559   0.0  
gb|ACD63086.1| RNA polymerase II largest subunit, partial [Lirio...   572   0.0  
gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papav...   572   0.0  
gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illic...   571   0.0  
gb|ACD63083.1| RNA polymerase II largest subunit, partial [Cerat...   569   0.0  
gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magno...   569   0.0  
gb|ACD63082.1| RNA polymerase II largest subunit, partial [Beta ...   569   0.0  
gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antir...   559   0.0  
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As...   586   0.0  
gb|ACD63089.1| RNA polymerase II largest subunit, partial [Perse...   564   0.0  
gb|ACD63091.1| RNA polymerase II largest subunit, partial [Sarum...   562   0.0  
gb|AAQ08517.1| RNA polymerase II largest subunit, partial [Nymph...   561   0.0  
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend...   572   0.0  
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo...   551   0.0  
gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Ambor...   558   0.0  
gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicot...   557   0.0  
emb|CBI18915.3| unnamed protein product, partial [Vitis vinifera]     571   0.0  
gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solan...   548   0.0  
gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimy...   556   0.0  

>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
          Length = 1009

 Score =  574 bits (1479), Expect = 0.0
 Identities = 287/294 (97%), Positives = 290/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL R SAWHSESETGFITPGDTQVRIEKGELLTGTLCK+TLG
Sbjct: 502  RPLWTGKQVFNLIIPKQINLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLG 561

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIW  VGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI
Sbjct: 562  TSTGSLIHVIW--VGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 619

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 620  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 679

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS
Sbjct: 680  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 739

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFF+AMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 740  YLRGLTPQEFFFYAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 793


>gb|AAY89341.1| RNA polymerase II largest subunit, partial [Rhododendron
           macrophyllum]
          Length = 589

 Score =  559 bits (1440), Expect = 0.0
 Identities = 277/294 (94%), Positives = 287/294 (97%)
 Frame = -3

Query: 883 RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
           +PLWTGKQVFNLIIPKQINLLRTSAWH+ESETG ITPGDT VRIEKGE++TGTLCK+TLG
Sbjct: 91  KPLWTGKQVFNLIIPKQINLLRTSAWHAESETGPITPGDTHVRIEKGEVITGTLCKKTLG 150

Query: 703 TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
           TSTGSLIHVIWEEVGPDAARKFLGHTQ LVNYWLLQ+ FSIGIGDTIADAATMEKINETI
Sbjct: 151 TSTGSLIHVIWEEVGPDAARKFLGHTQRLVNYWLLQSGFSIGIGDTIADAATMEKINETI 210

Query: 523 SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
           SKAKN+VKDLI+ AQDKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSL+ESNNL
Sbjct: 211 SKAKNEVKDLIRAAQDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNL 270

Query: 343 KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
           KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 271 KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENS 330

Query: 163 YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
           YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 331 YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 384


>gb|ACD63086.1| RNA polymerase II largest subunit, partial [Liriodendron tulipifera]
          Length = 1010

 Score =  572 bits (1474), Expect = 0.0
 Identities = 282/294 (95%), Positives = 289/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLG
Sbjct: 501  RPLWTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLG 560

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI
Sbjct: 561  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI 620

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKN+VK+LIK AQDKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 621  SKAKNEVKELIKAAQDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 680

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 681  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENS 740

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 741  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papaver orientale]
          Length = 1010

 Score =  572 bits (1473), Expect = 0.0
 Identities = 280/294 (95%), Positives = 290/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINLLRTSAWHSE+ETGFITPGDTQVRIE+GELLTGTLCK+ LG
Sbjct: 501  RPLWTGKQVFNLIIPKQINLLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALG 560

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TI
Sbjct: 561  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTI 620

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKN+VKDLI++AQ+K LEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 621  SKAKNEVKDLIRMAQEKSLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 680

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 681  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENS 740

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 741  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illicium parviflorum]
          Length = 1013

 Score =  571 bits (1472), Expect = 0.0
 Identities = 282/294 (95%), Positives = 289/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+RTSAWHSESETGFITPGDT VRIEKGELL+GTLCK+TLG
Sbjct: 504  RPLWTGKQVFNLIIPKQINLIRTSAWHSESETGFITPGDTHVRIEKGELLSGTLCKKTLG 563

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI
Sbjct: 564  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI 623

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 624  SKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 683

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 684  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENS 743

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 744  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797


>gb|ACD63083.1| RNA polymerase II largest subunit, partial [Ceratophyllum demersum]
          Length = 1010

 Score =  569 bits (1467), Expect = 0.0
 Identities = 280/294 (95%), Positives = 289/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLG
Sbjct: 501  RPLWTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLG 560

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETI
Sbjct: 561  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETI 620

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 621  SKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 680

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 681  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENS 740

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 741  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
          Length = 1010

 Score =  569 bits (1467), Expect = 0.0
 Identities = 280/294 (95%), Positives = 289/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLG
Sbjct: 501  RPLWTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLG 560

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETI
Sbjct: 561  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETI 620

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 621  SKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 680

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 681  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENS 740

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 741  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>gb|ACD63082.1| RNA polymerase II largest subunit, partial [Beta vulgaris]
          Length = 1012

 Score =  569 bits (1467), Expect = 0.0
 Identities = 280/294 (95%), Positives = 289/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLG
Sbjct: 503  RPLWTGKQVFNLIIPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLG 562

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETI
Sbjct: 563  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETI 622

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 623  SKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 682

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 683  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENS 742

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 743  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 796


>gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antirrhinum majus]
          Length = 780

 Score =  559 bits (1441), Expect = 0.0
 Identities = 276/294 (93%), Positives = 283/294 (96%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINLLR SAWH E E GFITPGDTQVRIEKGELLTGTLCK+TLG
Sbjct: 259  RPLWTGKQVFNLIIPKQINLLRYSAWHQEKEKGFITPGDTQVRIEKGELLTGTLCKKTLG 318

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            T TGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI
Sbjct: 319  TGTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 378

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
              AKN+VK+LI+ AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSE NNL
Sbjct: 379  QNAKNEVKELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSEHNNL 438

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 439  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENS 498

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 499  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 552


>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
 gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
          Length = 1843

 Score =  586 bits (1511), Expect = 0.0
 Identities = 291/294 (98%), Positives = 292/294 (99%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL R SAWHSESETGFITPGDTQVRIEKGELLTGTLCK+TLG
Sbjct: 583  RPLWTGKQVFNLIIPKQINLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLG 642

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI
Sbjct: 643  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 702

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 703  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 762

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS
Sbjct: 763  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 822

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 823  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 876


>gb|ACD63089.1| RNA polymerase II largest subunit, partial [Persea americana]
          Length = 1009

 Score =  564 bits (1453), Expect = 0.0
 Identities = 279/294 (94%), Positives = 285/294 (96%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+ TSAWHSESETGFITPGDTQVRIEKGELL GTLCK+TLG
Sbjct: 500  RPLWTGKQVFNLIIPKQINLIXTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLG 559

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI
Sbjct: 560  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI 619

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
             KAK++VKDLIK AQ+K LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 620  LKAKSEVKDLIKAAQEKSLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 679

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGF GRTLPHFTKDDYGPE RGFVENS
Sbjct: 680  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPEXRGFVENS 739

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 740  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 793


>gb|ACD63091.1| RNA polymerase II largest subunit, partial [Saruma henryi]
          Length = 1009

 Score =  562 bits (1448), Expect = 0.0
 Identities = 277/294 (94%), Positives = 287/294 (97%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINLLRTSAWH+ESETGFITPGDTQVRIE+GELL GTLCK+ LG
Sbjct: 500  RPLWTGKQVFNLIIPKQINLLRTSAWHAESETGFITPGDTQVRIERGELLAGTLCKKALG 559

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKIN+TI
Sbjct: 560  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINDTI 619

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            +KAKN+VK+LIK A +KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 620  TKAKNEVKELIKAAHEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 679

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFT+DD GPESRGFVENS
Sbjct: 680  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFINRTLPHFTQDDNGPESRGFVENS 739

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 740  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 793


>gb|AAQ08517.1| RNA polymerase II largest subunit, partial [Nymphaea odorata]
          Length = 1013

 Score =  561 bits (1447), Expect = 0.0
 Identities = 276/294 (93%), Positives = 289/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+R SAWHSESETGFITPGDT VRIE+GELL+GTLCK+T+G
Sbjct: 504  RPLWTGKQVFNLIIPKQINLIRYSAWHSESETGFITPGDTCVRIERGELLSGTLCKKTMG 563

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TS+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI
Sbjct: 564  TSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETI 623

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQ+SLSESNNL
Sbjct: 624  SKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNL 683

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 684  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENS 743

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 744  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797


>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
          Length = 1516

 Score =  572 bits (1474), Expect = 0.0
 Identities = 280/294 (95%), Positives = 290/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+R SAWH+ESETGFITPGDTQVRIE+GELL+GTLCK+T+G
Sbjct: 645  RPLWTGKQVFNLIIPKQINLIRFSAWHAESETGFITPGDTQVRIERGELLSGTLCKKTMG 704

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIAD ATMEKINETI
Sbjct: 705  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADVATMEKINETI 764

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKNDVK+LIK AQ+KQLEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 765  SKAKNDVKELIKQAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 824

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGF+GRTLPHFTKDDYGPESRGFVENS
Sbjct: 825  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFLGRTLPHFTKDDYGPESRGFVENS 884

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 885  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 938


>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
          Length = 804

 Score =  551 bits (1421), Expect = 0.0
 Identities = 272/292 (93%), Positives = 282/292 (96%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RP+WTGKQVFNLIIPK INL+R SAWHSE+ETGFITPGDT VRIEKGELL+GTLCK+TLG
Sbjct: 513  RPIWTGKQVFNLIIPKPINLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLG 572

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATM KINETI
Sbjct: 573  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMVKINETI 632

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAK+DVK+LI  A DKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 633  SKAKDDVKELIMQAHDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 692

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 693  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENS 752

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGT 8
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDI+VKYDGT
Sbjct: 753  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIIVKYDGT 804


>gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Amborella trichopoda]
          Length = 1013

 Score =  558 bits (1438), Expect = 0.0
 Identities = 276/294 (93%), Positives = 287/294 (97%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+R SAWHSESE+GFITPGDT VRIE+GELL+GTLCK+TLG
Sbjct: 504  RPLWTGKQVFNLIIPKQINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLG 563

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TS+GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ AFSIGIGDTIADAATMEKINETI
Sbjct: 564  TSSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETI 623

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 624  SKAKNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 683

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GF  RTLPHFTKDDYGPESRGFVENS
Sbjct: 684  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENS 743

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 744  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797


>gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicotiana tabacum]
          Length = 1010

 Score =  557 bits (1435), Expect = 0.0
 Identities = 276/294 (93%), Positives = 286/294 (97%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINLLR SAWH++SE G ITPGDTQVRIEKGELLTGTLCK+TLG
Sbjct: 501  RPLWTGKQVFNLIIPKQINLLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLG 560

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETI
Sbjct: 561  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETI 620

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            S AK+ VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNL
Sbjct: 621  SNAKSKVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNL 680

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 681  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENS 740

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 741  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794


>emb|CBI18915.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1565

 Score =  571 bits (1472), Expect = 0.0
 Identities = 282/294 (95%), Positives = 289/294 (98%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELL GTLCK+TLG
Sbjct: 630  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLG 689

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI
Sbjct: 690  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI 749

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKN+VK+LI+ AQ++QLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNL
Sbjct: 750  SKAKNEVKELIRAAQERQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNL 809

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 810  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENS 869

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 870  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 923


>gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solanum lycopersicum]
          Length = 773

 Score =  548 bits (1412), Expect = 0.0
 Identities = 271/294 (92%), Positives = 282/294 (95%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINLLR S WH++SE G+ITPGDTQVRIEKGELL+GTLCK+TLG
Sbjct: 259  RPLWTGKQVFNLIIPKQINLLRYSVWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLG 318

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIW EVGPDAARKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETI
Sbjct: 319  TSTGSLIHVIWXEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETI 378

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            S AK  VK+LIK AQ+K LE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNL
Sbjct: 379  SNAKAKVKELIKAAQEKLLEAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNL 438

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENS
Sbjct: 439  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENS 498

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 499  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 552


>gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimys winteri]
          Length = 1010

 Score =  556 bits (1432), Expect = 0.0
 Identities = 275/294 (93%), Positives = 283/294 (96%)
 Frame = -3

Query: 883  RPLWTGKQVFNLIIPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLG 704
            RPLWTGKQVFNLIIPKQINL+R SAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLG
Sbjct: 501  RPLWTGKQVFNLIIPKQINLIRQSAWHSETETGFITPGDTQVRIERGELLCGTLCKKTLG 560

Query: 703  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI 524
            TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATM+ I+ETI
Sbjct: 561  TSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMDTISETI 620

Query: 523  SKAKNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNL 344
            SKAKNDVK+LI  AQDK LE EPGRTM ESFEN+VNQVLNKARDDAGSSAQ SLSESNNL
Sbjct: 621  SKAKNDVKELIMAAQDKALEAEPGRTMTESFENRVNQVLNKARDDAGSSAQNSLSESNNL 680

Query: 343  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENS 164
            KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDD GPESRGFVENS
Sbjct: 681  KAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDNGPESRGFVENS 740

Query: 163  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
            YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 741  YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794