BLASTX nr result
ID: Ophiopogon27_contig00006884
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00006884
(482 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020266477.1| CRM-domain containing factor CFM3, chloropla... 152 5e-40
gb|ONK82090.1| uncharacterized protein A4U43_C01F36010 [Asparagu... 152 8e-40
ref|XP_020699580.1| CRM-domain containing factor CFM3, chloropla... 136 5e-34
ref|XP_020599364.1| LOW QUALITY PROTEIN: CRM-domain containing f... 136 5e-34
ref|XP_010924281.1| PREDICTED: CRM-domain containing factor CFM3... 135 1e-33
ref|XP_008787651.1| PREDICTED: CRM-domain containing factor CFM3... 132 8e-33
ref|XP_020105947.1| CRM-domain containing factor CFM3, chloropla... 128 2e-31
ref|XP_016203619.1| CRM-domain containing factor CFM3, chloropla... 128 3e-31
ref|XP_015966674.1| CRM-domain containing factor CFM3, chloropla... 128 3e-31
ref|XP_002532154.2| PREDICTED: chloroplastic group IIA intron sp... 127 4e-31
gb|OAY78592.1| Chloroplastic group IIA intron splicing facilitat... 122 5e-31
ref|XP_012093011.1| CRM-domain containing factor CFM3, chloropla... 127 8e-31
ref|XP_018830123.1| PREDICTED: CRM-domain containing factor CFM3... 126 1e-30
ref|XP_019457982.1| PREDICTED: CRM-domain containing factor CFM3... 126 1e-30
ref|XP_021625261.1| CRM-domain containing factor CFM3, chloropla... 125 2e-30
ref|XP_008240263.1| PREDICTED: CRM-domain containing factor CFM3... 125 3e-30
ref|XP_024169929.1| CRM-domain containing factor CFM3, chloropla... 125 3e-30
ref|XP_021810869.1| CRM-domain containing factor CFM3, chloropla... 125 4e-30
ref|XP_021909174.1| CRM-domain containing factor CFM3, chloropla... 125 4e-30
ref|XP_007211308.1| CRM-domain containing factor CFM3, chloropla... 124 7e-30
>ref|XP_020266477.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Asparagus officinalis]
Length = 741
Score = 152 bits (385), Expect = 5e-40
Identities = 81/101 (80%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFALIYYRGKNYQ PFCLRPR LLTKAKA RAVAMQRHE
Sbjct: 606 ARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPRNLLTKAKALKRAVAMQRHE 665
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTTIQSGNTLD 301
ALSQHI ELEKTIKKM ++LGYPE E SD S QS + D
Sbjct: 666 ALSQHITELEKTIKKMKSDLGYPETEGSDNSMGFQSAHASD 706
>gb|ONK82090.1| uncharacterized protein A4U43_C01F36010 [Asparagus officinalis]
Length = 1157
Score = 152 bits (385), Expect = 8e-40
Identities = 81/101 (80%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFALIYYRGKNYQ PFCLRPR LLTKAKA RAVAMQRHE
Sbjct: 1022 ARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPFCLRPRNLLTKAKALKRAVAMQRHE 1081
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTTIQSGNTLD 301
ALSQHI ELEKTIKKM ++LGYPE E SD S QS + D
Sbjct: 1082 ALSQHITELEKTIKKMKSDLGYPETEGSDNSMGFQSAHASD 1122
>ref|XP_020699580.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Dendrobium catenatum]
ref|XP_020699581.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Dendrobium catenatum]
ref|XP_020699582.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Dendrobium catenatum]
gb|PKU67163.1| Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Dendrobium catenatum]
Length = 852
Score = 136 bits (342), Expect = 5e-34
Identities = 73/104 (70%), Positives = 86/104 (82%), Gaps = 3/104 (2%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFA++YYRGKNY+ P CLRPR LLTKAKA R+VAMQRHE
Sbjct: 687 ARLLEYESGGILVAIERVPKGFAIVYYRGKNYRRPICLRPRNLLTKAKALKRSVAMQRHE 746
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESD--TSTTIQSGNTLDV 304
ALSQHI ELE+TIK+M +LGY E ++S +ST IQS + D+
Sbjct: 747 ALSQHIIELEETIKRMKLDLGYLEVDKSSSISSTNIQSDHDSDL 790
>ref|XP_020599364.1| LOW QUALITY PROTEIN: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial-like, partial [Phalaenopsis
equestris]
Length = 896
Score = 136 bits (342), Expect = 5e-34
Identities = 74/102 (72%), Positives = 84/102 (82%), Gaps = 3/102 (2%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFAL+YYRGKNYQ P CLRPR LLTKAKA R+VAMQRHE
Sbjct: 745 ARFLEYESGGILVAIERVPKGFALVYYRGKNYQRPICLRPRNLLTKAKALKRSVAMQRHE 804
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDT--STTIQSGNTL 298
AL+QHI ELE+TIK+M +LGY E +ES + S IQS + L
Sbjct: 805 ALTQHIIELEETIKRMKLDLGYLEVDESSSINSANIQSDHDL 846
>ref|XP_010924281.1| PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Elaeis guineensis]
Length = 846
Score = 135 bits (339), Expect = 1e-33
Identities = 75/101 (74%), Positives = 83/101 (82%), Gaps = 3/101 (2%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFALI+YRGKNYQ P LRPR LLTKAKA RAVAMQRHE
Sbjct: 706 ARLLEYESGGILVAIERVPKGFALIFYRGKNYQRPISLRPRNLLTKAKALKRAVAMQRHE 765
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTST--TIQSGNT 295
ALSQHI ELEKTI++M +LG E EE DT+ IQ+G+T
Sbjct: 766 ALSQHIIELEKTIEQMKLDLGISEGEERDTNNPQLIQTGST 806
>ref|XP_008787651.1| PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Phoenix dactylifera]
Length = 841
Score = 132 bits (333), Expect = 8e-33
Identities = 74/101 (73%), Positives = 82/101 (81%), Gaps = 3/101 (2%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A LEYESGGILVAIERVPKGFALI+YRGKNY+ P LRPR LLTKAKA RAVAMQRHE
Sbjct: 701 AHLLEYESGGILVAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRAVAMQRHE 760
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTST--TIQSGNT 295
ALSQHI ELEKTI++M +LG E EE D++ IQSG+T
Sbjct: 761 ALSQHIIELEKTIEQMKLDLGISEGEERDSNNPQLIQSGST 801
>ref|XP_020105947.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
isoform X1 [Ananas comosus]
Length = 848
Score = 128 bits (322), Expect = 2e-31
Identities = 71/90 (78%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFALIYYRGKNYQ P LRPR LLTKAKA RAVAMQRHE
Sbjct: 712 ARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPINLRPRNLLTKAKALKRAVAMQRHE 771
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDT 268
ALSQHI ELE TIK+M EL E +E DT
Sbjct: 772 ALSQHITELESTIKQMKFELRISEDDEGDT 801
>ref|XP_016203619.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Arachis ipaensis]
Length = 867
Score = 128 bits (321), Expect = 3e-31
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LE+ESGGILVAIERVPKGFALIYYRGKNY+ P LRP+ LLTK KA R+VAMQRHE
Sbjct: 715 ARLLEFESGGILVAIERVPKGFALIYYRGKNYKRPIILRPKNLLTKQKALKRSVAMQRHE 774
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTTIQSGNTLD 301
ALSQHI ELEKTI++M ELG P+ E + I+ N +D
Sbjct: 775 ALSQHITELEKTIEQMKTELGMPQDLEDEDMPNIEDHNQID 815
>ref|XP_015966674.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Arachis duranensis]
Length = 868
Score = 128 bits (321), Expect = 3e-31
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LE+ESGGILVAIERVPKGFALIYYRGKNY+ P LRP+ LLTK KA R+VAMQRHE
Sbjct: 714 ARLLEFESGGILVAIERVPKGFALIYYRGKNYKRPIILRPKNLLTKQKALKRSVAMQRHE 773
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTTIQSGNTLD 301
ALSQHI ELEKTI++M ELG P+ E + I+ N +D
Sbjct: 774 ALSQHITELEKTIEQMKTELGMPQDLEDEDMPNIEDHNQID 814
>ref|XP_002532154.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Ricinus communis]
Length = 857
Score = 127 bits (320), Expect = 4e-31
Identities = 68/102 (66%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFALIYYRGKNY+ P LRPR LLTKAKA R+VAMQRHE
Sbjct: 680 ARLLEYESGGILVAIERVPKGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQRHE 739
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTTIQSGNTLDV 304
ALSQHI+ELE+TI++M E+G ++ D T+ + G D+
Sbjct: 740 ALSQHISELERTIEQMKKEIGLSPEDDEDNWTSEEHGQINDI 781
>gb|OAY78592.1| Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic [Ananas comosus]
Length = 271
Score = 122 bits (305), Expect = 5e-31
Identities = 67/80 (83%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFALIYYRGKNYQ P LRPR LLTKAKA RAVAMQRHE
Sbjct: 180 ARLLEYESGGILVAIERVPKGFALIYYRGKNYQRPINLRPRNLLTKAKALKRAVAMQRHE 239
Query: 179 ALSQHIAELEKTIKKMTAEL 238
ALSQHI ELE TIK+M EL
Sbjct: 240 ALSQHITELESTIKQMKFEL 259
>ref|XP_012093011.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Jatropha curcas]
ref|XP_012093012.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Jatropha curcas]
gb|KDP20125.1| hypothetical protein JCGZ_05894 [Jatropha curcas]
Length = 839
Score = 127 bits (318), Expect = 8e-31
Identities = 67/93 (72%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFALIYYRGKNY+ P LRPR LLTKAKA R+VAMQRHE
Sbjct: 677 ARLLEYESGGILVAIERVPKGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQRHE 736
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTT 277
ALSQHI+ELE+TI++M E+G+ EE + + T
Sbjct: 737 ALSQHISELERTIEEMKKEIGFSPEEEDENNWT 769
>ref|XP_018830123.1| PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Juglans regia]
Length = 904
Score = 126 bits (317), Expect = 1e-30
Identities = 66/101 (65%), Positives = 81/101 (80%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKG+ALIYYRGKNYQ P +RPR LLTKAKA R+VAMQRHE
Sbjct: 751 ARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHE 810
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTTIQSGNTLD 301
ALSQHI+E+E+TI++M ELG + E + + + + N +D
Sbjct: 811 ALSQHISEVERTIEQMKKELGVSQDAEDENAGSSEGPNQID 851
>ref|XP_019457982.1| PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial-like [Lupinus angustifolius]
ref|XP_019457983.1| PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial-like [Lupinus angustifolius]
gb|OIW03640.1| hypothetical protein TanjilG_22297 [Lupinus angustifolius]
Length = 832
Score = 126 bits (316), Expect = 1e-30
Identities = 68/101 (67%), Positives = 79/101 (78%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKGFALIYYRGKNY+ P +RPR LLTKAKA R+VAMQRHE
Sbjct: 703 ARLLEYESGGILVAIERVPKGFALIYYRGKNYRRPITIRPRNLLTKAKALKRSVAMQRHE 762
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTTIQSGNTLD 301
ALSQHI ELEKTI +M ELG + E + +++ N +D
Sbjct: 763 ALSQHITELEKTIYQMRRELGMSQDLELEDRWSVEDHNQID 803
>ref|XP_021625261.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Manihot esculenta]
gb|OAY59179.1| hypothetical protein MANES_01G011000 [Manihot esculenta]
Length = 865
Score = 125 bits (315), Expect = 2e-30
Identities = 67/101 (66%), Positives = 80/101 (79%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVA+ERVPKGFALIYYRGKNY+ P LRPR LLTKAKA R+VAMQRHE
Sbjct: 691 ARLLEYESGGILVAVERVPKGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQRHE 750
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTTIQSGNTLD 301
ALSQHI+ELE+TI++M E+G P E+ + T + L+
Sbjct: 751 ALSQHISELERTIEQMKKEIGLPLEEDDKNNWTSEEQGQLN 791
>ref|XP_008240263.1| PREDICTED: CRM-domain containing factor CFM3,
chloroplastic/mitochondrial [Prunus mume]
Length = 820
Score = 125 bits (314), Expect = 3e-30
Identities = 66/84 (78%), Positives = 75/84 (89%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LE+ESGGILVAIERVPKGFALIYYRGKNYQ P LRPR LLTKAKA R+VAMQRHE
Sbjct: 688 ARLLEFESGGILVAIERVPKGFALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAMQRHE 747
Query: 179 ALSQHIAELEKTIKKMTAELGYPE 250
ALSQHI+ELEKTI++M++E+G E
Sbjct: 748 ALSQHISELEKTIEQMSSEIGVSE 771
>ref|XP_024169929.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Rosa chinensis]
gb|PRQ16555.1| putative RNA-binding, CRM domain-containing protein [Rosa
chinensis]
Length = 829
Score = 125 bits (314), Expect = 3e-30
Identities = 66/93 (70%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKG+ALIYYRGKNY+ P LRPR LLTKAKA R+VAMQRHE
Sbjct: 697 ARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPITLRPRNLLTKAKALKRSVAMQRHE 756
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTSTT 277
ALSQHI ELE+TI++M +E+G E E++++ T
Sbjct: 757 ALSQHIGELERTIEQMRSEIGISEDVENESTWT 789
>ref|XP_021810869.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Prunus avium]
Length = 820
Score = 125 bits (313), Expect = 4e-30
Identities = 68/92 (73%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LE+ESGGILVAIERVPKG+ALIYYRGKNYQ P LRPR LLTKAKA R+VAMQRHE
Sbjct: 688 ARLLEFESGGILVAIERVPKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAMQRHE 747
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESDTST 274
ALSQHI+ELEKTI++M++E+G A+ +D ST
Sbjct: 748 ALSQHISELEKTIEQMSSEIGV-SADIADEST 778
>ref|XP_021909174.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Carica papaya]
Length = 864
Score = 125 bits (313), Expect = 4e-30
Identities = 67/89 (75%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LEYESGGILVAIERVPKG+ALIYYRGKNY+ P LRPR LLTKAKA R+VAMQRHE
Sbjct: 704 ARLLEYESGGILVAIERVPKGYALIYYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHE 763
Query: 179 ALSQHIAELEKTIKKMTAELGYPEAEESD 265
ALSQHI+ELEKTI++M ELG E E +
Sbjct: 764 ALSQHISELEKTIEQMKEELGVTEDAEDE 792
>ref|XP_007211308.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
[Prunus persica]
gb|ONI09173.1| hypothetical protein PRUPE_5G221800 [Prunus persica]
Length = 820
Score = 124 bits (311), Expect = 7e-30
Identities = 68/94 (72%), Positives = 81/94 (86%), Gaps = 3/94 (3%)
Frame = +2
Query: 2 AQPLEYESGGILVAIERVPKGFALIYYRGKNYQWPFCLRPRILLTKAKA-*RAVAMQRHE 178
A+ LE+ESGGILVAIERVPKG+ALIYYRGKNYQ P LRPR LLTKAKA R+VA+QRHE
Sbjct: 688 ARLLEFESGGILVAIERVPKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAIQRHE 747
Query: 179 ALSQHIAELEKTIKKMTAELGYPE--AEESDTST 274
ALSQHI+ELEKTI++M++E+G E A+ES S+
Sbjct: 748 ALSQHISELEKTIEQMSSEIGVSEDIADESTWSS 781