BLASTX nr result

ID: Ophiopogon27_contig00006796 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00006796
         (458 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273390.1| suppressor protein SRP40 [Asparagus officina...    78   9e-14

>ref|XP_020273390.1| suppressor protein SRP40 [Asparagus officinalis]
          Length = 476

 Score = 77.8 bits (190), Expect = 9e-14
 Identities = 59/150 (39%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
 Frame = +3

Query: 18  LHVGIXXXXXXXXSLSDYFEESADKDNLEISCGVTXXXXXXXXXXXXXXXXXXXXGGDEN 197
           LHV I              EE+A+K +LEIS  +                       +EN
Sbjct: 135 LHVEIKDKKKKKKEPPASVEENANKSHLEISPEIAKECDTHDKAKKRKKHKMSSEDHNEN 194

Query: 198 TVLEDQKEKLQEIVEEKIAELKSLTNMSSSLSAESNA---XXXXXXXXXXXXSDSLAVNG 368
           T  +D KEK QE VEEKIAELKSL NM  +L AE+N                +DSL+VN 
Sbjct: 195 TEAKDHKEKFQEDVEEKIAELKSLPNM-INLPAETNGEHKSEKKKKKKTNSVTDSLSVNE 253

Query: 369 NNSTEEALKESDLVKEKTAASENGDGIEKK 458
              T E  KES+ VKEK + SEN   IEKK
Sbjct: 254 IKQTTETSKESESVKEKDSISENNGNIEKK 283


Top