BLASTX nr result
ID: Ophiopogon27_contig00006787
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00006787
(779 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009418282.1| PREDICTED: pentatricopeptide repeat-containi... 72 9e-11
gb|OAY75785.1| Pentatricopeptide repeat-containing protein, mito... 72 1e-10
ref|XP_020112868.1| pentatricopeptide repeat-containing protein ... 72 2e-10
ref|XP_010935759.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 68 3e-09
ref|XP_020593676.1| pentatricopeptide repeat-containing protein ... 64 9e-08
gb|PKU70880.1| Pentatricopeptide repeat-containing protein [Dend... 64 9e-08
ref|XP_020682845.1| pentatricopeptide repeat-containing protein ... 64 9e-08
ref|XP_018461224.1| PREDICTED: pentatricopeptide repeat-containi... 61 7e-07
gb|KJB42239.1| hypothetical protein B456_007G144200 [Gossypium r... 60 9e-07
gb|PPD97530.1| hypothetical protein GOBAR_DD05426 [Gossypium bar... 60 9e-07
ref|XP_016708891.1| PREDICTED: pentatricopeptide repeat-containi... 60 1e-06
ref|XP_008787393.1| PREDICTED: pentatricopeptide repeat-containi... 60 1e-06
ref|XP_006390316.1| pentatricopeptide repeat-containing protein ... 60 2e-06
ref|XP_010457734.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06
ref|XP_002889587.1| pentatricopeptide repeat-containing protein ... 59 2e-06
ref|XP_010480363.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06
ref|XP_010501338.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06
ref|XP_010262488.1| PREDICTED: pentatricopeptide repeat-containi... 58 7e-06
gb|OAP16609.1| MEF3 [Arabidopsis thaliana] 58 7e-06
ref|NP_172104.1| Pentatricopeptide repeat (PPR) superfamily prot... 58 7e-06
>ref|XP_009418282.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Musa acuminata subsp. malaccensis]
Length = 584
Score = 72.4 bits (176), Expect = 9e-11
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = +1
Query: 568 HARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVRA 747
HA++AFDQI + PHSWNTMLS Y +DLLRLY + +RNH PD+FS F +RA
Sbjct: 66 HAQQAFDQIHMKT--PHSWNTMLSGYFSTHNLADLLRLYKISRARNHRPDTFSLAFGLRA 123
Query: 748 CIGM 759
C+G+
Sbjct: 124 CVGL 127
>gb|OAY75785.1| Pentatricopeptide repeat-containing protein, mitochondrial, partial
[Ananas comosus]
Length = 728
Score = 72.0 bits (175), Expect = 1e-10
Identities = 36/64 (56%), Positives = 44/64 (68%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVRAC 750
AR FDQIP R PH+WNTM + Y RA L +LL LY L S+NH PDSF+ FA+RAC
Sbjct: 96 ARHVFDQIPHRT--PHAWNTMFAGYYRARLLPELLLLYKLSHSQNHRPDSFALAFALRAC 153
Query: 751 IGMA 762
G++
Sbjct: 154 AGLS 157
>ref|XP_020112868.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Ananas comosus]
Length = 718
Score = 71.6 bits (174), Expect = 2e-10
Identities = 36/64 (56%), Positives = 43/64 (67%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVRAC 750
AR FDQIP R PH+WNTM + Y RA L +LL LY L S NH PDSF+ FA+RAC
Sbjct: 96 ARHVFDQIPHRT--PHAWNTMFAGYYRARLLPELLLLYKLSHSHNHRPDSFALAFALRAC 153
Query: 751 IGMA 762
G++
Sbjct: 154 AGLS 157
>ref|XP_010935759.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g06140, mitochondrial [Elaeis guineensis]
Length = 689
Score = 68.2 bits (165), Expect = 3e-09
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVRAC 750
AR+AFDQI + PHSWNTMLS YS+ S++L+LY L + PDSFS FAVRAC
Sbjct: 67 ARRAFDQILAKT--PHSWNTMLSGYSKTHNLSEVLQLYKLSRAEGSRPDSFSLAFAVRAC 124
Query: 751 IGMA 762
+G++
Sbjct: 125 MGLS 128
>ref|XP_020593676.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Phalaenopsis equestris]
Length = 603
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +1
Query: 565 IHARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVR 744
++AR+AFDQ+PT+N P SW TMLS Y FS++L LY L + H P+S+S V +R
Sbjct: 64 LYARQAFDQMPTKN--PQSWTTMLSGYLSTKNFSEILNLYHLHRAEKHSPNSYSLVLTIR 121
Query: 745 AC 750
AC
Sbjct: 122 AC 123
>gb|PKU70880.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 627
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +1
Query: 568 HARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVRA 747
+AR+AFDQ+P++N P SWNTMLS Y FS++L LY L+ + N +S+S VF +RA
Sbjct: 67 YARQAFDQMPSKN--PQSWNTMLSGYLNTNTFSEILPLYQLYRAENQNTNSYSLVFIIRA 124
Query: 748 C 750
C
Sbjct: 125 C 125
>ref|XP_020682845.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Dendrobium catenatum]
Length = 696
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +1
Query: 568 HARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVRA 747
+AR+AFDQ+P++N P SWNTMLS Y FS++L LY L+ + N +S+S VF +RA
Sbjct: 67 YARQAFDQMPSKN--PQSWNTMLSGYLNTNTFSEILPLYQLYRAENQNTNSYSLVFIIRA 124
Query: 748 C 750
C
Sbjct: 125 C 125
>ref|XP_018461224.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Raphanus sativus]
Length = 556
Score = 60.8 bits (146), Expect = 7e-07
Identities = 29/63 (46%), Positives = 45/63 (71%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVRAC 750
A +FD+IP+RN N +SWNT+LS YS++ ++LRLY+ + DSF+ VFA++AC
Sbjct: 58 AAASFDRIPSRNRNRYSWNTILSGYSKSKNHVEILRLYNRMRKDCNGVDSFNLVFAIKAC 117
Query: 751 IGM 759
+G+
Sbjct: 118 VGL 120
>gb|KJB42239.1| hypothetical protein B456_007G144200 [Gossypium raimondii]
Length = 564
Score = 60.5 bits (145), Expect = 9e-07
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 562 LIHARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAV 741
L+ ++K FD+I ++NL HSWNT++S YS LF D+LRL++ DSF+ VFA+
Sbjct: 56 LLFSQKTFDRITSKNL--HSWNTIISGYSNKKLFLDVLRLFNRMRREIVGVDSFNLVFAI 113
Query: 742 RACIGMA 762
+ACIG++
Sbjct: 114 KACIGLS 120
>gb|PPD97530.1| hypothetical protein GOBAR_DD05426 [Gossypium barbadense]
Length = 569
Score = 60.5 bits (145), Expect = 9e-07
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 562 LIHARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAV 741
L+ ++K FD+I ++NL HSWNT++S YS LF D+LRL++ DSF+ VFA+
Sbjct: 56 LLFSQKTFDRITSKNL--HSWNTIISGYSNKKLFLDVLRLFNRMRREIVGVDSFNLVFAI 113
Query: 742 RACIGMA 762
+ACIG++
Sbjct: 114 KACIGLS 120
>ref|XP_016708891.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Gossypium hirsutum]
Length = 489
Score = 60.1 bits (144), Expect = 1e-06
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 562 LIHARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAV 741
L+ ++K FD+I ++NL HSWNT++S YS LF D+LRL++ DSF+ VFA+
Sbjct: 56 LLFSQKTFDRITSKNL--HSWNTIISGYSNKKLFLDVLRLFNRVRREIVGVDSFNLVFAI 113
Query: 742 RACIGMA 762
+ACIG++
Sbjct: 114 KACIGLS 120
>ref|XP_008787393.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Phoenix dactylifera]
ref|XP_017697843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Phoenix dactylifera]
Length = 664
Score = 60.1 bits (144), Expect = 1e-06
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVRAC 750
AR+AFDQI + PH+WNT+LS Y + S++L+LY L PDSF FAVRAC
Sbjct: 69 ARRAFDQILAKT--PHAWNTVLSGYFKTRSLSEVLQLYKLSRVEGSRPDSFGLAFAVRAC 126
Query: 751 IGMA 762
G++
Sbjct: 127 AGLS 130
>ref|XP_006390316.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Eutrema salsugineum]
gb|ESQ27602.1| hypothetical protein EUTSA_v10018358mg [Eutrema salsugineum]
Length = 556
Score = 59.7 bits (143), Expect = 2e-06
Identities = 28/63 (44%), Positives = 44/63 (69%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVRAC 750
A +FD+IP+ N N +SWNT+LS YS++ + ++L LY+ S DSF+ VFA++AC
Sbjct: 58 ATASFDRIPSWNRNRYSWNTILSGYSKSKSYGEILSLYNRMRSNCDGVDSFNLVFAIKAC 117
Query: 751 IGM 759
+G+
Sbjct: 118 VGL 120
>ref|XP_010457734.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Camelina sativa]
Length = 558
Score = 59.3 bits (142), Expect = 2e-06
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLY--SRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVR 744
A AF++IP R N +SWNT+LS Y S++C +SD+L LY+ DSF+ VFA++
Sbjct: 58 ATAAFNRIPCRKRNRYSWNTILSGYSKSKSCCYSDVLLLYNRMRRHCDGVDSFNLVFAIK 117
Query: 745 ACIGM 759
AC+G+
Sbjct: 118 ACVGL 122
>ref|XP_002889587.1| pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Arabidopsis lyrata subsp. lyrata]
gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 59.3 bits (142), Expect = 2e-06
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLY--SRACLFSDLLRLYSLFFSRNHLPDSFSPVFAVR 744
A +FD+IP N HSWNT+LS Y S++C +SD+L LY+ DSF+ VFA++
Sbjct: 58 ATASFDRIPCWKRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIK 117
Query: 745 ACIGM 759
AC+G+
Sbjct: 118 ACVGL 122
>ref|XP_010480363.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Camelina sativa]
Length = 559
Score = 59.3 bits (142), Expect = 2e-06
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLY--SRACLFSDLLRLYSLFFSRNHLP---DSFSPVF 735
A +FD+IP R N +SWNT+LS Y S++C +SD+L LY+ R H DSF+ VF
Sbjct: 58 ATASFDRIPCRKRNRYSWNTILSGYSKSKSCCYSDVLLLYNRM--RRHCDDGVDSFNLVF 115
Query: 736 AVRACIGM 759
A++AC+G+
Sbjct: 116 AIKACVGL 123
>ref|XP_010501338.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial-like [Camelina sativa]
Length = 559
Score = 59.3 bits (142), Expect = 2e-06
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLY--SRACLFSDLLRLYSLFFSRNHLP---DSFSPVF 735
A +FD+IP R N +SWNT+LS Y S++C +SD+L LY+ R H DSF+ VF
Sbjct: 58 ATASFDRIPCRKRNRYSWNTILSGYSKSKSCCYSDVLLLYNRM--RRHCDEGVDSFNLVF 115
Query: 736 AVRACIGM 759
A++AC+G+
Sbjct: 116 AIKACVGL 123
>ref|XP_010262488.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Nelumbo nucifera]
Length = 557
Score = 57.8 bits (138), Expect = 7e-06
Identities = 29/66 (43%), Positives = 43/66 (65%)
Frame = +1
Query: 562 LIHARKAFDQIPTRNLNPHSWNTMLSLYSRACLFSDLLRLYSLFFSRNHLPDSFSPVFAV 741
L +A + F+QI ++N PHSWNT++S Y + FSD+L L + H DSF+ VFAV
Sbjct: 11 LENASQTFEQISSKN--PHSWNTIISGYFKDGRFSDVLHLCKRMWGERHTADSFNLVFAV 68
Query: 742 RACIGM 759
+A +G+
Sbjct: 69 KASVGL 74
>gb|OAP16609.1| MEF3 [Arabidopsis thaliana]
Length = 558
Score = 57.8 bits (138), Expect = 7e-06
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLYSRA--CLFSDLLRLYSLFFSRNHLPDSFSPVFAVR 744
A +F++IP N HSWNT+LS YS++ C +SD+L LY+ DSF+ VFA++
Sbjct: 58 ATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIK 117
Query: 745 ACIGM 759
AC+G+
Sbjct: 118 ACVGL 122
>ref|NP_172104.1| Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
thaliana]
sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gb|AEE27946.1| Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
thaliana]
Length = 558
Score = 57.8 bits (138), Expect = 7e-06
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +1
Query: 571 ARKAFDQIPTRNLNPHSWNTMLSLYSRA--CLFSDLLRLYSLFFSRNHLPDSFSPVFAVR 744
A +F++IP N HSWNT+LS YS++ C +SD+L LY+ DSF+ VFA++
Sbjct: 58 ATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIK 117
Query: 745 ACIGM 759
AC+G+
Sbjct: 118 ACVGL 122