BLASTX nr result

ID: Ophiopogon27_contig00006445 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00006445
         (590 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256997.1| GRF1-interacting factor 2-like [Asparagus of...    73   3e-12

>ref|XP_020256997.1| GRF1-interacting factor 2-like [Asparagus officinalis]
 gb|ONK75160.1| uncharacterized protein A4U43_C03F13980 [Asparagus officinalis]
          Length = 213

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 51/142 (35%), Positives = 59/142 (41%)
 Frame = +3

Query: 3   AMPQPGGQYMQQSPIFPPKTXXXXXXXXXXXXXXXXXXXHPXXXXXXXXXXGMRAALXXX 182
           AMPQ G QYMQQ+PIFPPK+                   HP          GMR  +   
Sbjct: 90  AMPQAGAQYMQQAPIFPPKSPSQFTPQQIQELQQQQQLHHPTQMMPFQGHTGMRPPVGSI 149

Query: 183 XXXXXXXXXXXXXXXXXXSEPPRGSTPSSTADTRGRKPDXXXXXXXXXXXXXXXQKNSAS 362
                             +E P G TPSS  D      D               QKNSA+
Sbjct: 150 NGMHTESSHGGGGGS---NEAPAG-TPSSKKDAEKAADDG--------------QKNSAT 191

Query: 363 DQGSGDAEAGANPKRPEGSKTP 428
           +QGSG+AE   NP+RPEGSKTP
Sbjct: 192 EQGSGNAETPPNPQRPEGSKTP 213


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