BLASTX nr result

ID: Ophiopogon27_contig00005916 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00005916
         (402 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagu...   100   6e-22
ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [...   100   6e-22
ref|XP_020248467.1| sister chromatid cohesion 1 protein 4-like [...    65   1e-09

>gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagus officinalis]
          Length = 1222

 Score =  100 bits (249), Expect = 6e-22
 Identities = 69/175 (39%), Positives = 91/175 (52%), Gaps = 42/175 (24%)
 Frame = +3

Query: 3    MQGPSGILELIEAE------STDVLERLESSHDPCHVD------LPGNTISRDLDADICA 146
            +Q PSG  +LIE E      S D  E+LE+  +P  V       +P ++ + +   D+  
Sbjct: 805  VQVPSGTSKLIETEISKNAASIDAQEQLEAPINPQPVTPRPECPVPTDSRAEEKHHDMST 864

Query: 147  SPVQNSLN----NSHELAEVNNDIVHVA--------------------------AKNETS 236
               QNSLN    NSHELA+VNN  ++                            A N+TS
Sbjct: 865  ELDQNSLNKVYQNSHELAKVNNTTLNAGLPSIEGFTSAECASRYLVNNNVGPANANNDTS 924

Query: 237  LQGKDFSNAKDVSITVEDMGVDIVNVANLDCPRDGSANIGKDENGGTAVSVLDRF 401
            LQ  DFSN    SITVEDMGVDIVN+ N +CP+D  AN+ K+E+G T  S+LDRF
Sbjct: 925  LQVDDFSNGNAASITVEDMGVDIVNITNAECPQDNPANMSKNEDGETQASMLDRF 979


>ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
          Length = 1236

 Score =  100 bits (249), Expect = 6e-22
 Identities = 69/175 (39%), Positives = 91/175 (52%), Gaps = 42/175 (24%)
 Frame = +3

Query: 3    MQGPSGILELIEAE------STDVLERLESSHDPCHVD------LPGNTISRDLDADICA 146
            +Q PSG  +LIE E      S D  E+LE+  +P  V       +P ++ + +   D+  
Sbjct: 819  VQVPSGTSKLIETEISKNAASIDAQEQLEAPINPQPVTPRPECPVPTDSRAEEKHHDMST 878

Query: 147  SPVQNSLN----NSHELAEVNNDIVHVA--------------------------AKNETS 236
               QNSLN    NSHELA+VNN  ++                            A N+TS
Sbjct: 879  ELDQNSLNKVYQNSHELAKVNNTTLNAGLPSIEGFTSAECASRYLVNNNVGPANANNDTS 938

Query: 237  LQGKDFSNAKDVSITVEDMGVDIVNVANLDCPRDGSANIGKDENGGTAVSVLDRF 401
            LQ  DFSN    SITVEDMGVDIVN+ N +CP+D  AN+ K+E+G T  S+LDRF
Sbjct: 939  LQVDDFSNGNAASITVEDMGVDIVNITNAECPQDNPANMSKNEDGETQASMLDRF 993


>ref|XP_020248467.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
 gb|ONK56901.1| uncharacterized protein A4U43_C10F14450 [Asparagus officinalis]
          Length = 1217

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 59/172 (34%), Positives = 73/172 (42%), Gaps = 55/172 (31%)
 Frame = +3

Query: 6    QGPSGILELIEAEST------DVLERLESSHDPCHVDLPGNTISR-DLDA---------- 134
            QGPSG  ELI+ ++       D   R E   D   +D   NT SR +L A          
Sbjct: 845  QGPSGTPELIDTQNCKNAVNIDAQGRSEFPLD--QLDPSQNTTSRTELGALGISSNECAL 902

Query: 135  -----------DICASPVQNSLNNSHELAEVNNDIVHV---------------------- 215
                       DIC  P QNS    HEL EVNN+ +HV                      
Sbjct: 903  PTDSRIEEKHDDICPDPDQNS---HHELVEVNNNTLHVGESTSFEDFTSDYAAGDGVINN 959

Query: 216  -----AAKNETSLQGKDFSNAKDVSITVEDMGVDIVNVANLDCPRDGSANIG 356
                 A  N   L+  +FSN++  SITVEDMGVD++ V +LDCP D    IG
Sbjct: 960  NIVLGATSNNILLEVDNFSNSRAASITVEDMGVDMIPVPSLDCPLDSVQAIG 1011


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