BLASTX nr result

ID: Ophiopogon27_contig00005915 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00005915
         (402 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagu...   103   4e-23
ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [...   103   4e-23
ref|XP_020248467.1| sister chromatid cohesion 1 protein 4-like [...    71   1e-11

>gb|ONK72378.1| uncharacterized protein A4U43_C04F18790 [Asparagus officinalis]
          Length = 1222

 Score =  103 bits (258), Expect = 4e-23
 Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 42/175 (24%)
 Frame = -3

Query: 400  MQGPSGMLELIEAE------STDVLERLEPSHDPCHVD------LPGNAISRDLDADICA 257
            +Q PSG  +LIE E      S D  E+LE   +P  V       +P ++ + +   D+  
Sbjct: 805  VQVPSGTSKLIETEISKNAASIDAQEQLEAPINPQPVTPRPECPVPTDSRAEEKHHDMST 864

Query: 256  SPEQNSLN----NSHELAEVNNDIVHVA--------------------------ANNETS 167
              +QNSLN    NSHELA+VNN  ++                            ANN+TS
Sbjct: 865  ELDQNSLNKVYQNSHELAKVNNTTLNAGLPSIEGFTSAECASRYLVNNNVGPANANNDTS 924

Query: 166  LQGKDFSNAKDVSITVEDMGVDIVNVANLDCPRDGSANIGKDENGGTAVSVLDRF 2
            LQ  DFSN    SITVEDMGVDIVN+ N +CP+D  AN+ K+E+G T  S+LDRF
Sbjct: 925  LQVDDFSNGNAASITVEDMGVDIVNITNAECPQDNPANMSKNEDGETQASMLDRF 979


>ref|XP_020262799.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
          Length = 1236

 Score =  103 bits (258), Expect = 4e-23
 Identities = 70/175 (40%), Positives = 92/175 (52%), Gaps = 42/175 (24%)
 Frame = -3

Query: 400  MQGPSGMLELIEAE------STDVLERLEPSHDPCHVD------LPGNAISRDLDADICA 257
            +Q PSG  +LIE E      S D  E+LE   +P  V       +P ++ + +   D+  
Sbjct: 819  VQVPSGTSKLIETEISKNAASIDAQEQLEAPINPQPVTPRPECPVPTDSRAEEKHHDMST 878

Query: 256  SPEQNSLN----NSHELAEVNNDIVHVA--------------------------ANNETS 167
              +QNSLN    NSHELA+VNN  ++                            ANN+TS
Sbjct: 879  ELDQNSLNKVYQNSHELAKVNNTTLNAGLPSIEGFTSAECASRYLVNNNVGPANANNDTS 938

Query: 166  LQGKDFSNAKDVSITVEDMGVDIVNVANLDCPRDGSANIGKDENGGTAVSVLDRF 2
            LQ  DFSN    SITVEDMGVDIVN+ N +CP+D  AN+ K+E+G T  S+LDRF
Sbjct: 939  LQVDDFSNGNAASITVEDMGVDIVNITNAECPQDNPANMSKNEDGETQASMLDRF 993


>ref|XP_020248467.1| sister chromatid cohesion 1 protein 4-like [Asparagus officinalis]
 gb|ONK56901.1| uncharacterized protein A4U43_C10F14450 [Asparagus officinalis]
          Length = 1217

 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 55/170 (32%), Positives = 75/170 (44%), Gaps = 53/170 (31%)
 Frame = -3

Query: 397  QGPSGMLELIEAE-------------STDVLERLEPSHDPC-------------HVDLPG 296
            QGPSG  ELI+ +             S   L++L+PS +                  LP 
Sbjct: 845  QGPSGTPELIDTQNCKNAVNIDAQGRSEFPLDQLDPSQNTTSRTELGALGISSNECALPT 904

Query: 295  NAISRDLDADICASPEQNSLNNSHELAEVNNDIVHV------------------------ 188
            ++   +   DIC  P+QNS    HEL EVNN+ +HV                        
Sbjct: 905  DSRIEEKHDDICPDPDQNS---HHELVEVNNNTLHVGESTSFEDFTSDYAAGDGVINNNI 961

Query: 187  ---AANNETSLQGKDFSNAKDVSITVEDMGVDIVNVANLDCPRDGSANIG 47
               A +N   L+  +FSN++  SITVEDMGVD++ V +LDCP D    IG
Sbjct: 962  VLGATSNNILLEVDNFSNSRAASITVEDMGVDMIPVPSLDCPLDSVQAIG 1011


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