BLASTX nr result
ID: Ophiopogon27_contig00005913
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00005913
(777 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 202 5e-87
emb|CDP17738.1| unnamed protein product [Coffea canephora] 205 2e-86
emb|CDP17739.1| unnamed protein product [Coffea canephora] 200 1e-84
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 234 3e-67
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 175 3e-67
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 175 3e-67
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 171 3e-66
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 173 1e-65
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 169 1e-65
emb|CAJ86151.1| H0413E07.4 [Oryza sativa] 168 3e-65
emb|CAJ86192.1| H0306F03.15 [Oryza sativa] 168 3e-65
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 176 5e-65
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 167 7e-65
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 167 7e-65
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 166 9e-65
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 164 1e-64
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa] 168 8e-64
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 172 1e-63
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 169 2e-63
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 169 3e-63
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 202 bits (513), Expect(2) = 5e-87
Identities = 90/142 (63%), Positives = 117/142 (82%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
IF++WK +E TG+++KVL++DNGGEY+SDPF +C++ GIVRHFTV TPQQNGV+ER
Sbjct: 463 IFLKWKAEVENHTGRKIKVLQTDNGGEYKSDPFLNVCQDCGIVRHFTVRKTPQQNGVSER 522
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MN+TL+EK+ C+LS+ L + FW+EA+ YA H++NRLPSSAI G TP+E WSG PA DYD
Sbjct: 523 MNKTLVEKVCCMLSNAELGREFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSGKPATDYD 582
Query: 68 TLHVFGCPAYYHVRQDKLEPRA 3
+LHVFG AYYHV + KL+PRA
Sbjct: 583 SLHVFGSIAYYHVIESKLDPRA 604
Score = 148 bits (374), Expect(2) = 5e-87
Identities = 65/105 (61%), Positives = 82/105 (78%), Gaps = 3/105 (2%)
Frame = -3
Query: 775 YYLKGTTITGAQVGAVTS---DTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEF 605
YY +G+T+ G A +S D +A +LWH+RLGHAGEKSLQ L QGLLKG K+C LEF
Sbjct: 332 YYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGLLKGTKACKLEF 391
Query: 604 CEECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDGKH 470
CE CVL K+ +VKFGTA+HNT+GIL+Y+H+DVWGP KT S+ G+H
Sbjct: 392 CEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRH 436
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 205 bits (521), Expect(2) = 2e-86
Identities = 89/142 (62%), Positives = 118/142 (83%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
IF++WK R+E QTG+++K+LR+DNGGEY+SDPF+++C+E GIVRHF V PQQNGV+E
Sbjct: 549 IFLKWKARVENQTGRKIKILRTDNGGEYKSDPFQKICQECGIVRHFIVRKIPQQNGVSEH 608
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MN+TL+EK+RC+LS+ GL + FW+EA+ YA H++NRLPSSAIGG TP+E WSG A DYD
Sbjct: 609 MNKTLVEKVRCMLSNAGLGRKFWAEAVTYAQHLVNRLPSSAIGGKTPLEVWSGKLATDYD 668
Query: 68 TLHVFGCPAYYHVRQDKLEPRA 3
+L +F AYYHV + KL+PRA
Sbjct: 669 SLRIFDSTAYYHVNESKLDPRA 690
Score = 143 bits (360), Expect(2) = 2e-86
Identities = 65/106 (61%), Positives = 81/106 (76%), Gaps = 4/106 (3%)
Frame = -3
Query: 775 YYLKGTTITGAQVGAVTS----DTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLE 608
YY +G+T+ G A +S D +AT+LWH+RLG AGEKSLQ LA QGLLKG K C LE
Sbjct: 417 YYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGTKVCKLE 476
Query: 607 FCEECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDGKH 470
FCE CVL K+ KVKFGT +HNT+GIL+Y+H+DVWGP KT S+ G++
Sbjct: 477 FCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRY 522
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 200 bits (509), Expect(2) = 1e-84
Identities = 87/142 (61%), Positives = 117/142 (82%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
IF++WK R+E QTG+++K+LR+DNGGEY+SDPF+++ +E GIV+HFTV TPQQNGV+ER
Sbjct: 157 IFLKWKARVENQTGRKIKILRTDNGGEYKSDPFQKIGQECGIVQHFTVRKTPQQNGVSER 216
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MN+TL+EK+ C+LS+ L + FW+E + YA H++NRLPSSAIGG TP+E WSG P DYD
Sbjct: 217 MNKTLVEKVHCMLSNARLGRKFWAETVTYAQHLVNRLPSSAIGGKTPLEVWSGKPTTDYD 276
Query: 68 TLHVFGCPAYYHVRQDKLEPRA 3
+L +F AYYHV + KL+PRA
Sbjct: 277 SLRIFYSTAYYHVNESKLDPRA 298
Score = 142 bits (357), Expect(2) = 1e-84
Identities = 63/106 (59%), Positives = 80/106 (75%), Gaps = 4/106 (3%)
Frame = -3
Query: 775 YYLKGTTITGAQVGAVTS----DTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLE 608
YY +G+ + G +S D +AT+LWH+RLGHAGEKSLQ LA QGLLKG K C LE
Sbjct: 25 YYYQGSIVVGTAAATTSSSSKKDAEATKLWHMRLGHAGEKSLQNLAKQGLLKGTKVCKLE 84
Query: 607 FCEECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDGKH 470
FCE CVL K+ KVKFGT +HNT+GIL+Y+H++VWGP KT S+ G++
Sbjct: 85 FCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGPAKTPSLGGRY 130
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 234 bits (598), Expect = 3e-67
Identities = 105/143 (73%), Positives = 124/143 (86%)
Frame = -2
Query: 431 GIFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAE 252
GIF++WKKRME QTG+++K R+DNGGEY SDPF++ C E GIVRHFTV TPQQNGVAE
Sbjct: 311 GIFLKWKKRMETQTGRKIKHFRTDNGGEYTSDPFKKACEESGIVRHFTVKHTPQQNGVAE 370
Query: 251 RMNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADY 72
RMNRTLLEK+RC+LS+ GL K FW+EA+ YASH+INRLPSSAIGG TP+EKW G PA DY
Sbjct: 371 RMNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSAIGGKTPLEKWFGKPATDY 430
Query: 71 DTLHVFGCPAYYHVRQDKLEPRA 3
D+LHVFGC AYYHV++ KL+PRA
Sbjct: 431 DSLHVFGCTAYYHVKESKLDPRA 453
Score = 137 bits (344), Expect = 7e-33
Identities = 74/173 (42%), Positives = 100/173 (57%), Gaps = 27/173 (15%)
Frame = -3
Query: 775 YYLKGTTITGAQVGAVTSDTD--ATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
YY +GTTI G A + + + + +LWH+RLGHAGE+SL L QGLLK ++C L+FC
Sbjct: 182 YYYQGTTIIGTAAVASSDEKELESAKLWHMRLGHAGERSLNLLMKQGLLKNIQACKLDFC 241
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDGKH-XXXXXXXXXXXXWEY 425
E CV KKT+VKFGTA+H+T+GIL+Y+H+DVWGP+KTAS+ G H W Y
Sbjct: 242 EHCVKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFVDDFSRRIWVY 301
Query: 424 L-------------W-------SGRRGWSFRQEKGSKY----FAQTMEESTVV 338
W +GR+ FR + G +Y F + EES +V
Sbjct: 302 AMKTKDEVLGIFLKWKKRMETQTGRKIKHFRTDNGGEYTSDPFKKACEESGIV 354
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 175 bits (444), Expect(2) = 3e-67
Identities = 86/142 (60%), Positives = 105/142 (73%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
+F EWK +E QT ++VK+LR+DNG E+ S F+ C+ EGIVRH+TV TPQQNGVAER
Sbjct: 746 VFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAER 805
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MNRT++ K RCLLS+ GL K FW+EA+ A ++INR PS AI TP+E WSGSP A+Y
Sbjct: 806 MNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP-ANYS 864
Query: 68 TLHVFGCPAYYHVRQDKLEPRA 3
L VFGC AY HV KLEPRA
Sbjct: 865 DLRVFGCTAYAHVDNGKLEPRA 886
Score = 108 bits (271), Expect(2) = 3e-67
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITG--AQVGAVTSDTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+GTTI G A V S++DAT LWH+RLGH E L L+ +GLL G L+FC
Sbjct: 616 YHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFC 675
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E C+ K +VKF T+ H T+GIL+Y+H+D+WGP + S G
Sbjct: 676 EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGG 717
>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 175 bits (444), Expect(2) = 3e-67
Identities = 86/142 (60%), Positives = 105/142 (73%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
+F EWK +E QT ++VK+LR+DNG E+ S F+ C+ EGIVRH+TV TPQQNGVAER
Sbjct: 539 VFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAER 598
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MNRT++ K RCLLS+ GL K FW+EA+ A ++INR PS AI TP+E WSGSP A+Y
Sbjct: 599 MNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP-ANYS 657
Query: 68 TLHVFGCPAYYHVRQDKLEPRA 3
L VFGC AY HV KLEPRA
Sbjct: 658 DLRVFGCTAYAHVDNGKLEPRA 679
Score = 108 bits (271), Expect(2) = 3e-67
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITG--AQVGAVTSDTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+GTTI G A V S++DAT LWH+RLGH E L L+ +GLL G L+FC
Sbjct: 409 YHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFC 468
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E C+ K +VKF T+ H T+GIL+Y+H+D+WGP + S G
Sbjct: 469 EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGG 510
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 171 bits (434), Expect(2) = 3e-66
Identities = 83/142 (58%), Positives = 105/142 (73%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
+F EWK +E QT ++VK+LR+DNG ++ S F+ C+ EGIVRH+TV TPQQNGVAER
Sbjct: 500 VFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAER 559
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MNRT++ K RC+LS+ GL K FW+EA+ A ++INR PS AI TP++ WSGSP A+Y
Sbjct: 560 MNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSP-ANYS 618
Query: 68 TLHVFGCPAYYHVRQDKLEPRA 3
L VFGC AY HV KLEPRA
Sbjct: 619 DLRVFGCIAYAHVDNSKLEPRA 640
Score = 109 bits (273), Expect(2) = 3e-66
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITG--AQVGAVTSDTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+GTTI G A V S++DAT LWH+RLGH E L L+ +GLL G L+FC
Sbjct: 370 YHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIKKLKFC 429
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E C+ K +VKF T+ H T+GIL+Y+H+D+WGP + S G
Sbjct: 430 EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGG 471
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 173 bits (438), Expect(2) = 1e-65
Identities = 85/141 (60%), Positives = 103/141 (73%)
Frame = -2
Query: 425 FVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERM 246
F EWK ME QTGK++K LR+DNG E+ F+Q C++EGI RH TV TPQQNGVAERM
Sbjct: 518 FKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERM 577
Query: 245 NRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYDT 66
N+TLLE+ RC+LS+ GL + FW+EA+ A ++INR P + I TPME WSG AADY
Sbjct: 578 NQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGK-AADYSN 636
Query: 65 LHVFGCPAYYHVRQDKLEPRA 3
L FGC AYYHV + KLEPRA
Sbjct: 637 LKAFGCTAYYHVSEGKLEPRA 657
Score = 106 bits (264), Expect(2) = 1e-65
Identities = 49/102 (48%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITGAQVGAVTS--DTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+G+T+TG+ A + D T+LWH+RLGH GE+ +Q L+ + LL G K SLEFC
Sbjct: 387 YFLQGSTVTGSAHVASSEFHQKDMTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFC 446
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E CV K + KF A+H T+G L+YIH+D WGP + S+ G
Sbjct: 447 EHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGG 488
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 169 bits (428), Expect(2) = 1e-65
Identities = 83/141 (58%), Positives = 102/141 (72%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
+F EWK +E QT ++VK+LR+DNG E S F+ C+ EGIVRH+TV TPQQNGVAER
Sbjct: 448 VFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAER 507
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MNRT++ K RC+LS+ L K FW+EA+ A ++INR PS AI TP+E WSGSP A+Y
Sbjct: 508 MNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP-ANYS 566
Query: 68 TLHVFGCPAYYHVRQDKLEPR 6
L VFGC AY HV KLEPR
Sbjct: 567 DLRVFGCTAYAHVDNGKLEPR 587
Score = 109 bits (273), Expect(2) = 1e-65
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITG--AQVGAVTSDTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+GTTI G A V S++DAT LWH+RLGH E L L+ +GLL G L+FC
Sbjct: 318 YHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFC 377
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E C+ K +VKF T+ H T+GIL+Y+H+D+WGP + S G
Sbjct: 378 EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGG 419
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
Length = 1205
Score = 168 bits (426), Expect(2) = 3e-65
Identities = 81/141 (57%), Positives = 103/141 (73%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
+F EWK +E QT ++VK+LR+DNG E+ S F+ C+ EGI+RH+TV TPQQNGVAER
Sbjct: 524 VFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAER 583
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MNRT++ K RC+LS+ GL K FW+EA+ A ++INR P AI TP++ WSGSP A+Y
Sbjct: 584 MNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSP-ANYS 642
Query: 68 TLHVFGCPAYYHVRQDKLEPR 6
L VFGC AY HV KLEPR
Sbjct: 643 DLKVFGCTAYAHVDNGKLEPR 663
Score = 109 bits (272), Expect(2) = 3e-65
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITG--AQVGAVTSDTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+GTTI G A V S++DAT LWH+RLGH E L L+ +GLL G L+FC
Sbjct: 394 YHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFC 453
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E C+ K +VKF T+ H T+GIL+Y+H+D+WGP + S G
Sbjct: 454 EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGG 495
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
Length = 1037
Score = 168 bits (426), Expect(2) = 3e-65
Identities = 81/141 (57%), Positives = 103/141 (73%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
+F EWK +E QT ++VK+LR+DNG E+ S F+ C+ EGI+RH+TV TPQQNGVAER
Sbjct: 356 VFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQNGVAER 415
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MNRT++ K RC+LS+ GL K FW+EA+ A ++INR P AI TP++ WSGSP A+Y
Sbjct: 416 MNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSP-ANYS 474
Query: 68 TLHVFGCPAYYHVRQDKLEPR 6
L VFGC AY HV KLEPR
Sbjct: 475 DLKVFGCTAYAHVDNGKLEPR 495
Score = 109 bits (272), Expect(2) = 3e-65
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITG--AQVGAVTSDTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+GTTI G A V S++DAT LWH+RLGH E L L+ +GLL G L+FC
Sbjct: 226 YHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFC 285
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E C+ K +VKF T+ H T+GIL+Y+H+D+WGP + S G
Sbjct: 286 EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGG 327
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gb|ABF96427.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1326
Score = 176 bits (445), Expect(2) = 5e-65
Identities = 86/141 (60%), Positives = 102/141 (72%)
Frame = -2
Query: 425 FVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERM 246
F EWK R+E QT K VKVLR+DNGGE+ SD F+ CR+EGIVRH T+ TPQQNGVAERM
Sbjct: 533 FKEWKVRIERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERM 592
Query: 245 NRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYDT 66
NRT++ K RC+LS+ + K FW+EA A ++INR PS + TP+E WSG P ADY
Sbjct: 593 NRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGMP-ADYSQ 651
Query: 65 LHVFGCPAYYHVRQDKLEPRA 3
L VFGC AY HV KLEPRA
Sbjct: 652 LRVFGCTAYAHVDNGKLEPRA 672
Score = 101 bits (251), Expect(2) = 5e-65
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITGAQVGAVTSDTDA--TRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y L+G+T+ G+ A S + T LWH+RLGH E + L + LL G ++FC
Sbjct: 402 YVLRGSTLHGSVTAAAVSKDEPIKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFC 461
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E CV K +VKF T+VH T+GIL+Y+HTD+WGP++ A + G
Sbjct: 462 EHCVFGKHKRVKFNTSVHRTKGILDYVHTDLWGPSRKAYLGG 503
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 167 bits (424), Expect(2) = 7e-65
Identities = 83/141 (58%), Positives = 104/141 (73%)
Frame = -2
Query: 425 FVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERM 246
F ++K +E QTGK++K R+DNG E+ S F + C+ EGIVRH TV TPQQNGVAERM
Sbjct: 1026 FKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERM 1085
Query: 245 NRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYDT 66
NRTLLE+ RC+ S+ GL + FW+EA+ A +++NR PS+AI TP E WSGSP ADY
Sbjct: 1086 NRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSP-ADYSG 1144
Query: 65 LHVFGCPAYYHVRQDKLEPRA 3
L VFGCPAY HV + KL+PRA
Sbjct: 1145 LRVFGCPAYAHVNEGKLKPRA 1165
Score = 108 bits (271), Expect(2) = 7e-65
Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Frame = -3
Query: 775 YYLKGTTITGAQVGAVTS----DTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLE 608
Y+L G+++TG V V+S D+D T+LWH+RLGH E+ L L+ +GLL G + L
Sbjct: 895 YFLDGSSVTG--VAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLN 952
Query: 607 FCEECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
FCE CV K+T+VKF T +H T+G ++Y H+D+WGP+ T S G
Sbjct: 953 FCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGG 996
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 167 bits (424), Expect(2) = 7e-65
Identities = 83/141 (58%), Positives = 104/141 (73%)
Frame = -2
Query: 425 FVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERM 246
F ++K +E QTGK++K R+DNG E+ S F + C+ EGIVRH TV TPQQNGVAERM
Sbjct: 1047 FKQFKALIENQTGKKIKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERM 1106
Query: 245 NRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYDT 66
NRTLLE+ RC+ S+ GL + FW+EA+ A +++NR PS+AI TP E WSGSP ADY
Sbjct: 1107 NRTLLERARCMRSNAGLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSP-ADYSG 1165
Query: 65 LHVFGCPAYYHVRQDKLEPRA 3
L VFGCPAY HV + KL+PRA
Sbjct: 1166 LRVFGCPAYAHVNEGKLKPRA 1186
Score = 108 bits (271), Expect(2) = 7e-65
Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Frame = -3
Query: 775 YYLKGTTITGAQVGAVTS----DTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLE 608
Y+L G+++TG V V+S D+D T+LWH+RLGH E+ L L+ +GLL G + L
Sbjct: 916 YFLDGSSVTG--VAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLN 973
Query: 607 FCEECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
FCE CV K+T+VKF T +H T+G ++Y H+D+WGP+ T S G
Sbjct: 974 FCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGG 1017
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 166 bits (420), Expect(2) = 9e-65
Identities = 83/142 (58%), Positives = 103/142 (72%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
+F EWK +E QT ++VK+LR+DNG E+ S F+ C+ EGIVRH+TV TPQQNGVAER
Sbjct: 539 VFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAER 598
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MNR ++ K RC+LS+ GL K FW+EA+ A ++INR PS A TP+E WSGSP A+Y
Sbjct: 599 MNRIIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYA-NKKTPIEVWSGSP-ANYS 656
Query: 68 TLHVFGCPAYYHVRQDKLEPRA 3
L VFGC AY HV KLEPRA
Sbjct: 657 DLKVFGCTAYAHVDNGKLEPRA 678
Score = 110 bits (274), Expect(2) = 9e-65
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITG--AQVGAVTSDTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+GTTI G A V S++DAT LWH+RLGH E L L+ +GLL G L+FC
Sbjct: 409 YHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFC 468
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E C+ K +VKF T+ H T+GIL+Y+H+D+WGP + S G
Sbjct: 469 EHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGG 510
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gb|ABA92543.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1170
Score = 164 bits (416), Expect(2) = 1e-64
Identities = 82/142 (57%), Positives = 102/142 (71%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
+F EWK ++ QT ++VK+LR+DNG E S F+ C+ EGIVRH+TV TPQQNGVAER
Sbjct: 574 VFKEWKTMVKKQTERKVKILRTDNGMELCSKIFKSYCKCEGIVRHYTVPHTPQQNGVAER 633
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
M RT++ K RC+L + GL K FW+EA+ A ++INR PS AI TP+E WSGSP A+Y
Sbjct: 634 MKRTIISKSRCMLPYVGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP-ANYS 692
Query: 68 TLHVFGCPAYYHVRQDKLEPRA 3
L VFGC AY HV KLEPRA
Sbjct: 693 DLRVFGCIAYAHVDNGKLEPRA 714
Score = 111 bits (277), Expect(2) = 1e-64
Identities = 50/102 (49%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITG--AQVGAVTSDTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+GTTI G A V A+ S++DAT LWH+RLGH E L L+ +GLL G L+FC
Sbjct: 444 YHLQGTTILGNVATVSALLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFC 503
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E C+ K +VKF T+ H T+GIL+Y+H+++WGP + S G
Sbjct: 504 EHCIFGKHNRVKFNTSTHTTEGILDYVHSNLWGPARKTSFGG 545
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa]
Length = 1009
Score = 168 bits (426), Expect(2) = 8e-64
Identities = 83/142 (58%), Positives = 101/142 (71%)
Frame = -2
Query: 428 IFVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAER 249
+F EWK +E QT ++VK+LR DNG E+ S F+ C+ EGIVRH+TV TPQQNGVAER
Sbjct: 360 VFKEWKTMVERQTERKVKILRPDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAER 419
Query: 248 MNRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYD 69
MNRT++ K RC+LS+ GL K FW+EA+ A ++INR PS AI TP+E WS SP A Y
Sbjct: 420 MNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSSSP-AKYS 478
Query: 68 TLHVFGCPAYYHVRQDKLEPRA 3
L VF C AY HV KLEPRA
Sbjct: 479 DLRVFSCTAYAHVDNGKLEPRA 500
Score = 104 bits (260), Expect(2) = 8e-64
Identities = 49/102 (48%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITG--AQVGAVTSDTDATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y+L+GT I G A V S++DAT LWH+RLGH E L L+ +G+L G L FC
Sbjct: 230 YHLRGTPILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGMLDGQSIGKLIFC 289
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E C+ K +VKF T+ H T+GIL+Y+H+D+WGPT S G
Sbjct: 290 EHCIFGKHHRVKFNTSTHTTEGILDYVHSDLWGPTCKTSFGG 331
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 172 bits (435), Expect(2) = 1e-63
Identities = 84/141 (59%), Positives = 101/141 (71%)
Frame = -2
Query: 425 FVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERM 246
F EWK +E QT K VKVLR+DN GE+ SD F+ CR+EGIVRH T+ TPQQNGVAERM
Sbjct: 533 FKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERM 592
Query: 245 NRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYDT 66
NRT++ K RC+LS+ + K FW+EA A ++INR PS + TP+E WSG P ADY
Sbjct: 593 NRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSGMP-ADYSQ 651
Query: 65 LHVFGCPAYYHVRQDKLEPRA 3
L VFGC AY HV +KLEPRA
Sbjct: 652 LRVFGCTAYAHVDNEKLEPRA 672
Score = 100 bits (249), Expect(2) = 1e-63
Identities = 46/102 (45%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Frame = -3
Query: 775 YYLKGTTITGA-QVGAVTSDT-DATRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEFC 602
Y L+G+T+ G+ AVT D + T LWH+RLGH E + L + LL G +++FC
Sbjct: 402 YVLRGSTLHGSVTAAAVTKDEPNKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFC 461
Query: 601 EECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
E CV K +VKF T+VH T+GIL+Y+H D+WGP++ S+ G
Sbjct: 462 ERCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPSLGG 503
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 169 bits (428), Expect(2) = 2e-63
Identities = 81/141 (57%), Positives = 100/141 (70%)
Frame = -2
Query: 425 FVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERM 246
F WK +E QT ++VK+LR+DNGGE+ S F CR+EGIVRH T+ TPQQNGVAERM
Sbjct: 532 FKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERM 591
Query: 245 NRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYDT 66
NRT++ + RC+LSH + K FW+EA A ++INR PS + TP+E WSG+P ADY
Sbjct: 592 NRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGTP-ADYSQ 650
Query: 65 LHVFGCPAYYHVRQDKLEPRA 3
L VFGC AY HV KLEPRA
Sbjct: 651 LKVFGCTAYAHVDNGKLEPRA 671
Score = 102 bits (254), Expect(2) = 2e-63
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Frame = -3
Query: 775 YYLKGTTITGAQ--VGAVTSDTDA-TRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEF 605
Y L+G T+TG+ AVT+D + T LWH+RLGH + L + LLKG S ++F
Sbjct: 400 YVLRGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKF 459
Query: 604 CEECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
CE C+ K +V+F T+VH T+G L+Y+H D+WGP+K S+ G
Sbjct: 460 CEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGG 502
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 169 bits (428), Expect(2) = 3e-63
Identities = 81/141 (57%), Positives = 100/141 (70%)
Frame = -2
Query: 425 FVEWKKRMELQTGKRVKVLRSDNGGEYRSDPFEQLCREEGIVRHFTVSGTPQQNGVAERM 246
F WK +E QT ++VK+LR+DNGGE+ S F CR+EGIVRH T+ TPQQNGVAERM
Sbjct: 532 FKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERM 591
Query: 245 NRTLLEKIRCLLSHEGLTKSFWSEALQYASHIINRLPSSAIGGLTPMEKWSGSPAADYDT 66
NRT++ + RC+LSH + K FW+EA A ++INR PS + TP+E WSG+P ADY
Sbjct: 592 NRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGTP-ADYSQ 650
Query: 65 LHVFGCPAYYHVRQDKLEPRA 3
L VFGC AY HV KLEPRA
Sbjct: 651 LKVFGCTAYAHVDNGKLEPRA 671
Score = 102 bits (253), Expect(2) = 3e-63
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Frame = -3
Query: 775 YYLKGTTITGAQ--VGAVTSDTDA-TRLWHLRLGHAGEKSLQALATQGLLKGAKSCSLEF 605
Y L+G T+TG+ A+T+D + T LWH+RLGH + L + LLKG S ++F
Sbjct: 400 YVLRGCTLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKF 459
Query: 604 CEECVLAKKTKVKFGTAVHNTQGILEYIHTDVWGPTKTASMDG 476
CE C+ K +V+F T+VH T+G L+Y+H D+WGP+K S+ G
Sbjct: 460 CEHCIFGKHKRVQFNTSVHTTKGTLDYVHADLWGPSKKPSLGG 502