BLASTX nr result

ID: Ophiopogon27_contig00004880 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00004880
         (447 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252861.1| extensin-like isoform X2 [Asparagus officina...    81   5e-15
ref|XP_020252859.1| extensin-like isoform X1 [Asparagus officina...    81   5e-15
gb|ONK77228.1| uncharacterized protein A4U43_C02F4400 [Asparagus...    81   5e-15

>ref|XP_020252861.1| extensin-like isoform X2 [Asparagus officinalis]
          Length = 499

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 8/102 (7%)
 Frame = -3

Query: 445 RVLSDIIGDPNAPKERDYPSLLRAEADVRA------TRVEEPHVGSTSTYERLPLSSYHV 284
           RV  + + DPNA   RDY SL R +  V        +R     +GS S YERLPLSSY  
Sbjct: 401 RVFLETVEDPNAHLSRDYQSLHRTDGYVTPQGNQIDSRYPLEQMGSNSRYERLPLSSYR- 459

Query: 283 QHYDPQVYVQGYATT--VQGQPSGAVPVSTRYSFAGAAPAPR 164
             YDP +Y+QG ++T   Q QPS +V VS+RY+FAGAAPA R
Sbjct: 460 --YDPSLYMQGRSSTDAQQRQPSSSVSVSSRYTFAGAAPAHR 499


>ref|XP_020252859.1| extensin-like isoform X1 [Asparagus officinalis]
          Length = 537

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 8/102 (7%)
 Frame = -3

Query: 445 RVLSDIIGDPNAPKERDYPSLLRAEADVRA------TRVEEPHVGSTSTYERLPLSSYHV 284
           RV  + + DPNA   RDY SL R +  V        +R     +GS S YERLPLSSY  
Sbjct: 439 RVFLETVEDPNAHLSRDYQSLHRTDGYVTPQGNQIDSRYPLEQMGSNSRYERLPLSSYR- 497

Query: 283 QHYDPQVYVQGYATT--VQGQPSGAVPVSTRYSFAGAAPAPR 164
             YDP +Y+QG ++T   Q QPS +V VS+RY+FAGAAPA R
Sbjct: 498 --YDPSLYMQGRSSTDAQQRQPSSSVSVSSRYTFAGAAPAHR 537


>gb|ONK77228.1| uncharacterized protein A4U43_C02F4400 [Asparagus officinalis]
          Length = 549

 Score = 81.3 bits (199), Expect = 5e-15
 Identities = 50/102 (49%), Positives = 62/102 (60%), Gaps = 8/102 (7%)
 Frame = -3

Query: 445 RVLSDIIGDPNAPKERDYPSLLRAEADVRA------TRVEEPHVGSTSTYERLPLSSYHV 284
           RV  + + DPNA   RDY SL R +  V        +R     +GS S YERLPLSSY  
Sbjct: 451 RVFLETVEDPNAHLSRDYQSLHRTDGYVTPQGNQIDSRYPLEQMGSNSRYERLPLSSYR- 509

Query: 283 QHYDPQVYVQGYATT--VQGQPSGAVPVSTRYSFAGAAPAPR 164
             YDP +Y+QG ++T   Q QPS +V VS+RY+FAGAAPA R
Sbjct: 510 --YDPSLYMQGRSSTDAQQRQPSSSVSVSSRYTFAGAAPAHR 549


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