BLASTX nr result

ID: Ophiopogon27_contig00004879 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00004879
         (640 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252861.1| extensin-like isoform X2 [Asparagus officina...    66   4e-09
ref|XP_020252859.1| extensin-like isoform X1 [Asparagus officina...    66   5e-09
gb|ONK77228.1| uncharacterized protein A4U43_C02F4400 [Asparagus...    66   5e-09

>ref|XP_020252861.1| extensin-like isoform X2 [Asparagus officinalis]
          Length = 499

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
 Frame = -1

Query: 580 VGSTSAYERLPLSSYHVQHYDPQVYVQGYATT--VQGQPSGTVPVSTRYSFAGAAPAPR 410
           +GS S YERLPLSSY    YDP +Y+QG ++T   Q QPS +V VS+RY+FAGAAPA R
Sbjct: 444 MGSNSRYERLPLSSYR---YDPSLYMQGRSSTDAQQRQPSSSVSVSSRYTFAGAAPAHR 499


>ref|XP_020252859.1| extensin-like isoform X1 [Asparagus officinalis]
          Length = 537

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
 Frame = -1

Query: 580 VGSTSAYERLPLSSYHVQHYDPQVYVQGYATT--VQGQPSGTVPVSTRYSFAGAAPAPR 410
           +GS S YERLPLSSY    YDP +Y+QG ++T   Q QPS +V VS+RY+FAGAAPA R
Sbjct: 482 MGSNSRYERLPLSSYR---YDPSLYMQGRSSTDAQQRQPSSSVSVSSRYTFAGAAPAHR 537


>gb|ONK77228.1| uncharacterized protein A4U43_C02F4400 [Asparagus officinalis]
          Length = 549

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
 Frame = -1

Query: 580 VGSTSAYERLPLSSYHVQHYDPQVYVQGYATT--VQGQPSGTVPVSTRYSFAGAAPAPR 410
           +GS S YERLPLSSY    YDP +Y+QG ++T   Q QPS +V VS+RY+FAGAAPA R
Sbjct: 494 MGSNSRYERLPLSSYR---YDPSLYMQGRSSTDAQQRQPSSSVSVSSRYTFAGAAPAHR 549


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