BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00004704
         (2316 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264905.1| MMS19 nucleotide excision repair protein hom...  1063   0.0  
ref|XP_020264909.1| MMS19 nucleotide excision repair protein hom...  1063   0.0  
ref|XP_020264908.1| MMS19 nucleotide excision repair protein hom...  1063   0.0  
ref|XP_020264910.1| MMS19 nucleotide excision repair protein hom...  1053   0.0  
ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair ...   793   0.0  
ref|XP_019710613.1| PREDICTED: MMS19 nucleotide excision repair ...   773   0.0  
ref|XP_018674227.1| PREDICTED: MMS19 nucleotide excision repair ...   665   0.0  
ref|XP_018674225.1| PREDICTED: MMS19 nucleotide excision repair ...   668   0.0  
ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair ...   668   0.0  
gb|OVA08536.1| RNAPII transcription regulator C-terminal [Maclea...   668   0.0  
ref|XP_019052369.1| PREDICTED: MMS19 nucleotide excision repair ...   660   0.0  
emb|CBI36057.3| unnamed protein product, partial [Vitis vinifera]     626   0.0  
ref|XP_023921854.1| MMS19 nucleotide excision repair protein hom...   620   0.0  
ref|XP_023921853.1| MMS19 nucleotide excision repair protein hom...   620   0.0  
ref|XP_020676947.1| MMS19 nucleotide excision repair protein hom...   620   0.0  
ref|XP_020676946.1| MMS19 nucleotide excision repair protein hom...   620   0.0  
ref|XP_023921852.1| MMS19 nucleotide excision repair protein hom...   620   0.0  
ref|XP_020676943.1| MMS19 nucleotide excision repair protein hom...   620   0.0  
ref|XP_023921851.1| MMS19 nucleotide excision repair protein hom...   620   0.0  
ref|XP_020676941.1| MMS19 nucleotide excision repair protein hom...   620   0.0  

>ref|XP_020264905.1| MMS19 nucleotide excision repair protein homolog isoform X1
            [Asparagus officinalis]
 ref|XP_020264906.1| MMS19 nucleotide excision repair protein homolog isoform X1
            [Asparagus officinalis]
          Length = 1159

 Score = 1063 bits (2749), Expect = 0.0
 Identities = 550/775 (70%), Positives = 620/775 (80%), Gaps = 3/775 (0%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KSNVG+V G EAKMLAENYLANV+ QSLA+ DRKLCFEVLQCLLD+YPEAVM LDDELI 
Sbjct: 131  KSNVGMVVGNEAKMLAENYLANVQTQSLAVHDRKLCFEVLQCLLDVYPEAVMDLDDELIR 190

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSGA--SFSTELFEILSCYFPIYFTHQKN 354
            GILDAIDGEKDPRCL+LTF+IAE LMR+FPDQS +  SF+ E+FEILSCYFPIYFTHQK 
Sbjct: 191  GILDAIDGEKDPRCLILTFHIAETLMRLFPDQSKSEESFAEEIFEILSCYFPIYFTHQKV 250

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            DD +IKRDDLSR LMNAFCSTPYFEP AI             AK+DSLKYLSNC+LHYGA
Sbjct: 251  DDLQIKRDDLSRELMNAFCSTPYFEPFAIPLVLDKLSSSLPLAKLDSLKYLSNCILHYGA 310

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RMFKHA  IW ALKD +F+ SP+G     + +S  D+ESQ++QIAKEAL CL MA+SQL
Sbjct: 311  DRMFKHAKDIWFALKDVIFDFSPEG-----IIESAGDMESQKAQIAKEALTCLQMAVSQL 365

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
            N  NSEPF SLILDD DIER F+SVCLERSYSGI KE+  QL+S+GSILSIA+K S D C
Sbjct: 366  NFVNSEPFTSLILDDPDIERIFLSVCLERSYSGIPKETLHQLNSIGSILSIASKVSIDGC 425

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQ 1074
            S VFQKFFPRLMN+LGV  +DSS+ CIK+C T SN LNFGALYLCVE L SCRDLT+  Q
Sbjct: 426  SKVFQKFFPRLMNLLGVDKNDSSYGCIKDCNTSSN-LNFGALYLCVEFLDSCRDLTIGLQ 484

Query: 1075 DLSPQVPDSWWYLLKDFSGPVTFALKSALVNTGTAA-TGPEHMSCVVKGLQVLTTFPGHI 1251
            D+ PQ PDSW YLLKDF GP+++A KS+LVNT TAA TG E++ CVVKGLQVL TFPG  
Sbjct: 485  DIPPQAPDSWCYLLKDFCGPLSYAFKSSLVNTVTAAKTGQEYVPCVVKGLQVLATFPGCH 544

Query: 1252 SPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVV 1431
            SPVSE IYEDILA LMSVIT R D+ +LWRT LEAL+QIGLHIEKF D+KK+  Y KFVV
Sbjct: 545  SPVSEKIYEDILAVLMSVITGRFDEPFLWRTALEALIQIGLHIEKFHDSKKERGYCKFVV 604

Query: 1432 ERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGA 1611
            ERI S+L  DD  TSL +KLE ISEIG AGPDFMS VIRGLE+ IFS+FS+ +VNGN+GA
Sbjct: 605  ERIVSMLLHDDT-TSLGVKLEVISEIGTAGPDFMSTVIRGLEDVIFSNFSEIWVNGNLGA 663

Query: 1612 AEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATM 1791
            AEILVPLL+CYSNRVLPWCH FGK DQ+A+QFA+NIWNLMEKS+ LSV+ QR GVLD TM
Sbjct: 664  AEILVPLLQCYSNRVLPWCHKFGKADQVAMQFATNIWNLMEKSSVLSVEFQRNGVLDTTM 723

Query: 1792 MAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIPDMSGLSCKD 1971
            M MKL VGYCTEE+QS +VRKAY ILSSTTF                  IPD+SGLSCKD
Sbjct: 724  MVMKLCVGYCTEENQSIIVRKAYTILSSTTFLLLDSLGLPLSNLEALQSIPDISGLSCKD 783

Query: 1972 EWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAE 2151
            EWLISLFAS+VI L PQTP+PDV AL RLFT+FLLKGHLPAAQALASMINKWP N+  AE
Sbjct: 784  EWLISLFASVVIVLHPQTPVPDVGALTRLFTVFLLKGHLPAAQALASMINKWPANIGTAE 843

Query: 2152 QPSAYNLEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXXQIHGVVG 2316
              S + LE  I+VVLE++SA+LSS  LKECKI N TDD          QIH +VG
Sbjct: 844  LSSTHELEVVIDVVLESISAVLSSC-LKECKIANGTDDNLSCSSLISYQIHAIVG 897


>ref|XP_020264909.1| MMS19 nucleotide excision repair protein homolog isoform X3
            [Asparagus officinalis]
          Length = 1050

 Score = 1063 bits (2749), Expect = 0.0
 Identities = 550/775 (70%), Positives = 620/775 (80%), Gaps = 3/775 (0%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KSNVG+V G EAKMLAENYLANV+ QSLA+ DRKLCFEVLQCLLD+YPEAVM LDDELI 
Sbjct: 131  KSNVGMVVGNEAKMLAENYLANVQTQSLAVHDRKLCFEVLQCLLDVYPEAVMDLDDELIR 190

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSGA--SFSTELFEILSCYFPIYFTHQKN 354
            GILDAIDGEKDPRCL+LTF+IAE LMR+FPDQS +  SF+ E+FEILSCYFPIYFTHQK 
Sbjct: 191  GILDAIDGEKDPRCLILTFHIAETLMRLFPDQSKSEESFAEEIFEILSCYFPIYFTHQKV 250

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            DD +IKRDDLSR LMNAFCSTPYFEP AI             AK+DSLKYLSNC+LHYGA
Sbjct: 251  DDLQIKRDDLSRELMNAFCSTPYFEPFAIPLVLDKLSSSLPLAKLDSLKYLSNCILHYGA 310

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RMFKHA  IW ALKD +F+ SP+G     + +S  D+ESQ++QIAKEAL CL MA+SQL
Sbjct: 311  DRMFKHAKDIWFALKDVIFDFSPEG-----IIESAGDMESQKAQIAKEALTCLQMAVSQL 365

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
            N  NSEPF SLILDD DIER F+SVCLERSYSGI KE+  QL+S+GSILSIA+K S D C
Sbjct: 366  NFVNSEPFTSLILDDPDIERIFLSVCLERSYSGIPKETLHQLNSIGSILSIASKVSIDGC 425

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQ 1074
            S VFQKFFPRLMN+LGV  +DSS+ CIK+C T SN LNFGALYLCVE L SCRDLT+  Q
Sbjct: 426  SKVFQKFFPRLMNLLGVDKNDSSYGCIKDCNTSSN-LNFGALYLCVEFLDSCRDLTIGLQ 484

Query: 1075 DLSPQVPDSWWYLLKDFSGPVTFALKSALVNTGTAA-TGPEHMSCVVKGLQVLTTFPGHI 1251
            D+ PQ PDSW YLLKDF GP+++A KS+LVNT TAA TG E++ CVVKGLQVL TFPG  
Sbjct: 485  DIPPQAPDSWCYLLKDFCGPLSYAFKSSLVNTVTAAKTGQEYVPCVVKGLQVLATFPGCH 544

Query: 1252 SPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVV 1431
            SPVSE IYEDILA LMSVIT R D+ +LWRT LEAL+QIGLHIEKF D+KK+  Y KFVV
Sbjct: 545  SPVSEKIYEDILAVLMSVITGRFDEPFLWRTALEALIQIGLHIEKFHDSKKERGYCKFVV 604

Query: 1432 ERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGA 1611
            ERI S+L  DD  TSL +KLE ISEIG AGPDFMS VIRGLE+ IFS+FS+ +VNGN+GA
Sbjct: 605  ERIVSMLLHDDT-TSLGVKLEVISEIGTAGPDFMSTVIRGLEDVIFSNFSEIWVNGNLGA 663

Query: 1612 AEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATM 1791
            AEILVPLL+CYSNRVLPWCH FGK DQ+A+QFA+NIWNLMEKS+ LSV+ QR GVLD TM
Sbjct: 664  AEILVPLLQCYSNRVLPWCHKFGKADQVAMQFATNIWNLMEKSSVLSVEFQRNGVLDTTM 723

Query: 1792 MAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIPDMSGLSCKD 1971
            M MKL VGYCTEE+QS +VRKAY ILSSTTF                  IPD+SGLSCKD
Sbjct: 724  MVMKLCVGYCTEENQSIIVRKAYTILSSTTFLLLDSLGLPLSNLEALQSIPDISGLSCKD 783

Query: 1972 EWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAE 2151
            EWLISLFAS+VI L PQTP+PDV AL RLFT+FLLKGHLPAAQALASMINKWP N+  AE
Sbjct: 784  EWLISLFASVVIVLHPQTPVPDVGALTRLFTVFLLKGHLPAAQALASMINKWPANIGTAE 843

Query: 2152 QPSAYNLEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXXQIHGVVG 2316
              S + LE  I+VVLE++SA+LSS  LKECKI N TDD          QIH +VG
Sbjct: 844  LSSTHELEVVIDVVLESISAVLSSC-LKECKIANGTDDNLSCSSLISYQIHAIVG 897


>ref|XP_020264908.1| MMS19 nucleotide excision repair protein homolog isoform X2
            [Asparagus officinalis]
 gb|ONK69772.1| uncharacterized protein A4U43_C05F26550 [Asparagus officinalis]
          Length = 1144

 Score = 1063 bits (2749), Expect = 0.0
 Identities = 550/775 (70%), Positives = 620/775 (80%), Gaps = 3/775 (0%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KSNVG+V G EAKMLAENYLANV+ QSLA+ DRKLCFEVLQCLLD+YPEAVM LDDELI 
Sbjct: 116  KSNVGMVVGNEAKMLAENYLANVQTQSLAVHDRKLCFEVLQCLLDVYPEAVMDLDDELIR 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSGA--SFSTELFEILSCYFPIYFTHQKN 354
            GILDAIDGEKDPRCL+LTF+IAE LMR+FPDQS +  SF+ E+FEILSCYFPIYFTHQK 
Sbjct: 176  GILDAIDGEKDPRCLILTFHIAETLMRLFPDQSKSEESFAEEIFEILSCYFPIYFTHQKV 235

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            DD +IKRDDLSR LMNAFCSTPYFEP AI             AK+DSLKYLSNC+LHYGA
Sbjct: 236  DDLQIKRDDLSRELMNAFCSTPYFEPFAIPLVLDKLSSSLPLAKLDSLKYLSNCILHYGA 295

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RMFKHA  IW ALKD +F+ SP+G     + +S  D+ESQ++QIAKEAL CL MA+SQL
Sbjct: 296  DRMFKHAKDIWFALKDVIFDFSPEG-----IIESAGDMESQKAQIAKEALTCLQMAVSQL 350

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
            N  NSEPF SLILDD DIER F+SVCLERSYSGI KE+  QL+S+GSILSIA+K S D C
Sbjct: 351  NFVNSEPFTSLILDDPDIERIFLSVCLERSYSGIPKETLHQLNSIGSILSIASKVSIDGC 410

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQ 1074
            S VFQKFFPRLMN+LGV  +DSS+ CIK+C T SN LNFGALYLCVE L SCRDLT+  Q
Sbjct: 411  SKVFQKFFPRLMNLLGVDKNDSSYGCIKDCNTSSN-LNFGALYLCVEFLDSCRDLTIGLQ 469

Query: 1075 DLSPQVPDSWWYLLKDFSGPVTFALKSALVNTGTAA-TGPEHMSCVVKGLQVLTTFPGHI 1251
            D+ PQ PDSW YLLKDF GP+++A KS+LVNT TAA TG E++ CVVKGLQVL TFPG  
Sbjct: 470  DIPPQAPDSWCYLLKDFCGPLSYAFKSSLVNTVTAAKTGQEYVPCVVKGLQVLATFPGCH 529

Query: 1252 SPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVV 1431
            SPVSE IYEDILA LMSVIT R D+ +LWRT LEAL+QIGLHIEKF D+KK+  Y KFVV
Sbjct: 530  SPVSEKIYEDILAVLMSVITGRFDEPFLWRTALEALIQIGLHIEKFHDSKKERGYCKFVV 589

Query: 1432 ERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGA 1611
            ERI S+L  DD  TSL +KLE ISEIG AGPDFMS VIRGLE+ IFS+FS+ +VNGN+GA
Sbjct: 590  ERIVSMLLHDDT-TSLGVKLEVISEIGTAGPDFMSTVIRGLEDVIFSNFSEIWVNGNLGA 648

Query: 1612 AEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATM 1791
            AEILVPLL+CYSNRVLPWCH FGK DQ+A+QFA+NIWNLMEKS+ LSV+ QR GVLD TM
Sbjct: 649  AEILVPLLQCYSNRVLPWCHKFGKADQVAMQFATNIWNLMEKSSVLSVEFQRNGVLDTTM 708

Query: 1792 MAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIPDMSGLSCKD 1971
            M MKL VGYCTEE+QS +VRKAY ILSSTTF                  IPD+SGLSCKD
Sbjct: 709  MVMKLCVGYCTEENQSIIVRKAYTILSSTTFLLLDSLGLPLSNLEALQSIPDISGLSCKD 768

Query: 1972 EWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAE 2151
            EWLISLFAS+VI L PQTP+PDV AL RLFT+FLLKGHLPAAQALASMINKWP N+  AE
Sbjct: 769  EWLISLFASVVIVLHPQTPVPDVGALTRLFTVFLLKGHLPAAQALASMINKWPANIGTAE 828

Query: 2152 QPSAYNLEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXXQIHGVVG 2316
              S + LE  I+VVLE++SA+LSS  LKECKI N TDD          QIH +VG
Sbjct: 829  LSSTHELEVVIDVVLESISAVLSSC-LKECKIANGTDDNLSCSSLISYQIHAIVG 882


>ref|XP_020264910.1| MMS19 nucleotide excision repair protein homolog isoform X4
            [Asparagus officinalis]
          Length = 1024

 Score = 1053 bits (2724), Expect = 0.0
 Identities = 545/770 (70%), Positives = 615/770 (79%), Gaps = 3/770 (0%)
 Frame = +1

Query: 16   VVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELISGILDA 195
            +V G EAKMLAENYLANV+ QSLA+ DRKLCFEVLQCLLD+YPEAVM LDDELI GILDA
Sbjct: 1    MVVGNEAKMLAENYLANVQTQSLAVHDRKLCFEVLQCLLDVYPEAVMDLDDELIRGILDA 60

Query: 196  IDGEKDPRCLMLTFYIAEALMRIFPDQSGA--SFSTELFEILSCYFPIYFTHQKNDDFEI 369
            IDGEKDPRCL+LTF+IAE LMR+FPDQS +  SF+ E+FEILSCYFPIYFTHQK DD +I
Sbjct: 61   IDGEKDPRCLILTFHIAETLMRLFPDQSKSEESFAEEIFEILSCYFPIYFTHQKVDDLQI 120

Query: 370  KRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGAVRMFK 549
            KRDDLSR LMNAFCSTPYFEP AI             AK+DSLKYLSNC+LHYGA RMFK
Sbjct: 121  KRDDLSRELMNAFCSTPYFEPFAIPLVLDKLSSSLPLAKLDSLKYLSNCILHYGADRMFK 180

Query: 550  HANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNS 729
            HA  IW ALKD +F+ SP+G     + +S  D+ESQ++QIAKEAL CL MA+SQLN  NS
Sbjct: 181  HAKDIWFALKDVIFDFSPEG-----IIESAGDMESQKAQIAKEALTCLQMAVSQLNFVNS 235

Query: 730  EPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQ 909
            EPF SLILDD DIER F+SVCLERSYSGI KE+  QL+S+GSILSIA+K S D CS VFQ
Sbjct: 236  EPFTSLILDDPDIERIFLSVCLERSYSGIPKETLHQLNSIGSILSIASKVSIDGCSKVFQ 295

Query: 910  KFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQDLSPQ 1089
            KFFPRLMN+LGV  +DSS+ CIK+C T SN LNFGALYLCVE L SCRDLT+  QD+ PQ
Sbjct: 296  KFFPRLMNLLGVDKNDSSYGCIKDCNTSSN-LNFGALYLCVEFLDSCRDLTIGLQDIPPQ 354

Query: 1090 VPDSWWYLLKDFSGPVTFALKSALVNTGTAA-TGPEHMSCVVKGLQVLTTFPGHISPVSE 1266
             PDSW YLLKDF GP+++A KS+LVNT TAA TG E++ CVVKGLQVL TFPG  SPVSE
Sbjct: 355  APDSWCYLLKDFCGPLSYAFKSSLVNTVTAAKTGQEYVPCVVKGLQVLATFPGCHSPVSE 414

Query: 1267 DIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERIAS 1446
             IYEDILA LMSVIT R D+ +LWRT LEAL+QIGLHIEKF D+KK+  Y KFVVERI S
Sbjct: 415  KIYEDILAVLMSVITGRFDEPFLWRTALEALIQIGLHIEKFHDSKKERGYCKFVVERIVS 474

Query: 1447 LLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEILV 1626
            +L  DD  TSL +KLE ISEIG AGPDFMS VIRGLE+ IFS+FS+ +VNGN+GAAEILV
Sbjct: 475  MLLHDDT-TSLGVKLEVISEIGTAGPDFMSTVIRGLEDVIFSNFSEIWVNGNLGAAEILV 533

Query: 1627 PLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAMKL 1806
            PLL+CYSNRVLPWCH FGK DQ+A+QFA+NIWNLMEKS+ LSV+ QR GVLD TMM MKL
Sbjct: 534  PLLQCYSNRVLPWCHKFGKADQVAMQFATNIWNLMEKSSVLSVEFQRNGVLDTTMMVMKL 593

Query: 1807 VVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIPDMSGLSCKDEWLIS 1986
             VGYCTEE+QS +VRKAY ILSSTTF                  IPD+SGLSCKDEWLIS
Sbjct: 594  CVGYCTEENQSIIVRKAYTILSSTTFLLLDSLGLPLSNLEALQSIPDISGLSCKDEWLIS 653

Query: 1987 LFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPSAY 2166
            LFAS+VI L PQTP+PDV AL RLFT+FLLKGHLPAAQALASMINKWP N+  AE  S +
Sbjct: 654  LFASVVIVLHPQTPVPDVGALTRLFTVFLLKGHLPAAQALASMINKWPANIGTAELSSTH 713

Query: 2167 NLEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXXQIHGVVG 2316
             LE  I+VVLE++SA+LSS  LKECKI N TDD          QIH +VG
Sbjct: 714  ELEVVIDVVLESISAVLSSC-LKECKIANGTDDNLSCSSLISYQIHAIVG 762


>ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Phoenix
            dactylifera]
          Length = 1153

 Score =  793 bits (2048), Expect = 0.0
 Identities = 424/762 (55%), Positives = 542/762 (71%), Gaps = 11/762 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            K NVG+V   EA+ LAE+YL NV+ QSLA+ DRKLCFEVLQCLL+ YPEAV  L D+L+ 
Sbjct: 116  KKNVGMVKSSEARALAESYLTNVQVQSLAVHDRKLCFEVLQCLLEAYPEAVEMLGDDLVY 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSGA--SFSTELFEILSCYFPIYFTHQKN 354
            GI +AID EKDPRCLMLTF++ E L R+FPD SGA  SF+ +LF+ILS YFPIYFTH ++
Sbjct: 176  GICEAIDEEKDPRCLMLTFHLVEILARVFPDSSGAVASFAGDLFDILSRYFPIYFTHPRS 235

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            DDF+I R+DLSRALM+AFCSTP+FEP AI             AK+DSLKYL+NC+ HYG 
Sbjct: 236  DDFDITREDLSRALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQHYGT 295

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RM KHA AIWS LKDA+FN SP  T+ +S S++  + ES+E+QIAKEAL CL  AI  L
Sbjct: 296  DRMIKHAGAIWSNLKDAIFNHSPHKTL-SSTSEAAGNTESEENQIAKEALICLQTAILHL 354

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
            +    +P +SLI++D+DIE  F  V  E + +GIS ES+RQLS++G+ILS+++K S   C
Sbjct: 355  DSLEKDPILSLIVEDEDIEMKFGLVSNEGTCTGISIESRRQLSAVGNILSVSSKASMSGC 414

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQ 1074
            + VFQKFFP LMN+L VS S SS+ C  + +T S  LNFGALYLC++LLASCR+LT+ +Q
Sbjct: 415  TRVFQKFFPHLMNILEVSASSSSYGCNTKNRTSS--LNFGALYLCIQLLASCRELTLTSQ 472

Query: 1075 DLSPQVP---DSWWYLLKDFSGPVTFALKSALVNTGTAA-----TGPEHMSCVVKGLQVL 1230
            D SPQV    D WW +L+ FSGP+  AL SALV  G++      TG EH    VKGLQVL
Sbjct: 473  DFSPQVTTVQDIWWSMLQHFSGPLVHALGSALVAVGSSELVSNNTGHEHAIYEVKGLQVL 532

Query: 1231 TTFPGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQL 1410
              FPG   P+SED+YE IL  L+S++T R +DT+LW+ +++AL++IG  IEK  D+ + +
Sbjct: 533  AMFPGCYLPISEDVYEYILVILVSMVTERFEDTFLWKLSVKALIEIGSFIEKHHDSYRGI 592

Query: 1411 SYSKFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSY 1590
            S+++ VVERI SL   DD    LALKL+AISEIG  G D+MS VIR LEEAI S F    
Sbjct: 593  SFNRIVVERIVSLFQHDDSTMPLALKLDAISEIGTIGVDYMSRVIRLLEEAILSKFLAVC 652

Query: 1591 VNGNVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQ 1770
            V G + AAEILVPLLECYSNRVL WC+T G  D++A++FA  IW+ ME  T    D++ +
Sbjct: 653  VEGCLEAAEILVPLLECYSNRVLAWCYTSGNFDEVAMRFALCIWDQMESITIFDKDVKLK 712

Query: 1771 GVLDATMMAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIPDM 1950
             +LD  MM MKL+V  C EESQS +VRKAY++L STTF                   PD+
Sbjct: 713  DLLDRVMMTMKLLVWGCVEESQSLIVRKAYSVLLSTTFLSEESLSFSPSKLEGLQLTPDL 772

Query: 1951 SGLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWP 2130
              LS +DEW++SLFAS+V+AL PQTP+PDV  L  + T FLLKGHLPAAQALASM+NKW 
Sbjct: 773  VNLSWRDEWIVSLFASVVMALLPQTPLPDVKLLSNMLTTFLLKGHLPAAQALASMVNKWH 832

Query: 2131 GNVSRAEQPSAYNLEETINVVLE-NLSAILSSSPLKECKIVN 2253
             N+ ++E  SAY L+E I ++LE +L +I SSS L +  ++N
Sbjct: 833  VNIDKSEVSSAYTLDEAIEMILERSLLSIQSSSNLGKSDLLN 874


>ref|XP_019710613.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Elaeis
            guineensis]
          Length = 1154

 Score =  773 bits (1996), Expect = 0.0
 Identities = 412/762 (54%), Positives = 530/762 (69%), Gaps = 11/762 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            K NVG+V   EA+ +AE+YL NV+ QSLA+ DRKLCFEVLQCLL++YPEAV  L D+L+ 
Sbjct: 117  KKNVGMVKSSEARAVAESYLMNVQVQSLAVHDRKLCFEVLQCLLEVYPEAVEMLGDDLVY 176

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKN 354
            GI +AID EKDPRCLMLTF++ E L R+FPD SG  ASF+ +LF+ILS YFPIYFTH ++
Sbjct: 177  GICEAIDEEKDPRCLMLTFHLVEILARVFPDSSGSVASFAGDLFDILSRYFPIYFTHPRS 236

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            DD +I R++LS ALM+AFCSTP+FEP AI             AK+DSLKYL+NC+ HYG 
Sbjct: 237  DDLDITREELSMALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQHYGT 296

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RM KHA AIWS LKD + N SP  T+F S S+   ++ES+E+QIAKEAL CL  AI  L
Sbjct: 297  DRMIKHAKAIWSNLKDVILNHSPHKTLF-STSELAGNMESEENQIAKEALICLQTAILHL 355

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
            +     P +S I++D+DIE  F  V  E + +GIS ES+R LS++G+ILS+++K S   C
Sbjct: 356  DSLEKNPILSFIVEDEDIEMKFGLVSNEGTGTGISIESRRHLSAVGNILSVSSKASMSGC 415

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQ 1074
            + VFQKFFPRLMN+L +S S SS+ C     T S  LNFGALYLC++LLAS R+L + +Q
Sbjct: 416  TRVFQKFFPRLMNILEISASSSSNGCNTNNGTSS--LNFGALYLCIQLLASFRELILTSQ 473

Query: 1075 DLSPQV---PDSWWYLLKDFSGPVTFALKSALVNTGTAA-----TGPEHMSCVVKGLQVL 1230
            D SPQV    D WW +L+ FSGP+  AL SAL+   ++      TG EH    VKGLQVL
Sbjct: 474  DFSPQVITVQDGWWCMLQHFSGPLAHALGSALMGARSSELVNNNTGHEHAIYEVKGLQVL 533

Query: 1231 TTFPGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQL 1410
             TFPG   P SED+YE IL   MS+ T R +D +LW+ +++AL++IG  IEK+ D+ + +
Sbjct: 534  ATFPGCYLPTSEDVYEYILVIFMSIATERFEDAFLWKLSVKALIEIGSFIEKYHDSYRGI 593

Query: 1411 SYSKFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSY 1590
            S+++ VVERI SL   DD    LALKL+AISEIG  G D+MS VI+ LEEAI S F    
Sbjct: 594  SFNRIVVERIVSLFQQDDSTMPLALKLDAISEIGTIGVDYMSRVIKLLEEAILSKFLAVC 653

Query: 1591 VNGNVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQ 1770
            V G + AAEILVPLLECYSNRVL WC+T G  D++A+QFA  IWN ME  T    D + Q
Sbjct: 654  VEGRLEAAEILVPLLECYSNRVLLWCYTSGNFDEVAMQFALCIWNQMESITIFDKDAKIQ 713

Query: 1771 GVLDATMMAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIPDM 1950
             + D  M  MKL+VG C EE+QS +VRKAY++L ST+F                   PD+
Sbjct: 714  DLFDRMMTTMKLLVGGCAEENQSLIVRKAYSVLLSTSFLSEESLPFSSSKLEGLQVTPDL 773

Query: 1951 SGLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWP 2130
              LS +DEW++SLFAS+VIAL PQTP+PDV  L+ + T FLLKGHLPAAQALASM+NKW 
Sbjct: 774  VNLSWRDEWIVSLFASVVIALLPQTPLPDVKLLLNVLTTFLLKGHLPAAQALASMVNKWH 833

Query: 2131 GNVSRAEQPSAYNLEETINVVLE-NLSAILSSSPLKECKIVN 2253
             N+ ++E P+AY L+E I ++LE +L ++ SSS L +  ++N
Sbjct: 834  VNIDKSEVPNAYTLDEAIEMILERSLLSVQSSSNLGKSDLLN 875


>ref|XP_018674227.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Musa acuminata subsp. malaccensis]
 ref|XP_018674229.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Musa acuminata subsp. malaccensis]
          Length = 1006

 Score =  665 bits (1717), Expect = 0.0
 Identities = 368/734 (50%), Positives = 491/734 (66%), Gaps = 5/734 (0%)
 Frame = +1

Query: 16   VVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELISGILDA 195
            +V   +AK LAE++L NV+ QSLA+RDRKLCFEV+Q LLD+YP+AV+ L D+L+ GI +A
Sbjct: 1    MVESNDAKSLAESFLRNVQVQSLAVRDRKLCFEVIQRLLDVYPQAVVELGDDLVYGICEA 60

Query: 196  IDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKNDDFEI 369
            ID EKDPRCLMLTF +   L R+FPD SG   +FS+++F+ILS YFPIYFTH K D  +I
Sbjct: 61   IDEEKDPRCLMLTFSLVGTLGRLFPDPSGPMGNFSSDVFDILSRYFPIYFTHSKGDGLDI 120

Query: 370  KRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGAVRMFK 549
             RDDLS+ALM+AF S+P FEP  I             AK+DSLKYL++C+ HY A ++ K
Sbjct: 121  TRDDLSKALMDAFSSSPLFEPFVIPLLLEKLSSSLPSAKLDSLKYLNSCLRHYEADKVVK 180

Query: 550  HANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNS 729
            H+  IWS LKD +FNLSP  +  ++   S  D++S+ +QIA EALNCL  AIS LN  + 
Sbjct: 181  HSQVIWSNLKDVIFNLSPHRSSLSTYG-SNGDMDSEVNQIADEALNCLQTAISHLNFPDQ 239

Query: 730  EPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQ 909
            + F+ LI+DD+DI   F SV   + YSG S E   QLS+LGSILSIA+K S  CC+ VFQ
Sbjct: 240  DSFLCLIIDDEDIGTRFWSVTSIKKYSGTSTEIHCQLSALGSILSIASKVSIYCCTKVFQ 299

Query: 910  KFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQDLSPQ 1089
            KFF  LM++LGVS    S  C+ +  T S+ LNFGALYL +ELL SCR+LT+ +++ SP+
Sbjct: 300  KFFSCLMDILGVSGKHPSKLCVTDHNTCSDGLNFGALYLSMELLTSCRELTLSSKEFSPE 359

Query: 1090 V---PDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISPV 1260
            V   P S +Y+LK+ S  +  AL S L          EH+ C VKGLQVL TFP   SPV
Sbjct: 360  VISEPRSSFYVLKNISRELCDALGSIL----ETPESEEHVYCAVKGLQVLATFPEIYSPV 415

Query: 1261 SEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVERI 1440
            SE  YEDIL  LMS+I  RS +TYLW  +L+ALVQIGL IE   D+ K  SY+K V++RI
Sbjct: 416  SEATYEDILVMLMSIIARRSKETYLWELSLKALVQIGLWIENAHDSAKATSYNKLVIQRI 475

Query: 1441 ASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAEI 1620
             S+L  +D   SL+LKL AISEI   G  ++  +++  EEAI S+    +  GN+ ++++
Sbjct: 476  VSMLQSNDSTISLSLKLVAISEISSIGL-YLLRIVQAFEEAIVSNLRACF-EGNLKSSDV 533

Query: 1621 LVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMAM 1800
            LVPLL+CYSN+VLP CHT G  + IA+Q A +IWN +E        +  + VLD  MM M
Sbjct: 534  LVPLLQCYSNQVLPRCHTCGNFNDIAVQVAVSIWNQIENVAVFRSSILMKDVLDQVMMTM 593

Query: 1801 KLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIPDMSGLSCKDEWL 1980
            K +V  CTEESQ  +++KAY  L  T F                  I D + +SC+DEW+
Sbjct: 594  KHLVAGCTEESQFLILQKAYGSLPKTFF-IAEPLPCALSQLEGLQCIQDTTLMSCRDEWI 652

Query: 1981 ISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQPS 2160
             SLF S+VIALRPQTP+ +V  L+ LF + LLKG++ AAQALASM+NKWP +V+++E   
Sbjct: 653  FSLFGSVVIALRPQTPLVNVKILLNLFVVLLLKGNMLAAQALASMVNKWPADVNKSE--I 710

Query: 2161 AYNLEETINVVLEN 2202
            +Y+L++ I  +L++
Sbjct: 711  SYSLDQAIEEILKS 724


>ref|XP_018674225.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Musa acuminata subsp. malaccensis]
 ref|XP_018674226.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Musa acuminata subsp. malaccensis]
          Length = 1126

 Score =  668 bits (1723), Expect = 0.0
 Identities = 369/735 (50%), Positives = 492/735 (66%), Gaps = 5/735 (0%)
 Frame = +1

Query: 13   GVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELISGILD 192
            G+V   +AK LAE++L NV+ QSLA+RDRKLCFEV+Q LLD+YP+AV+ L D+L+ GI +
Sbjct: 120  GMVESNDAKSLAESFLRNVQVQSLAVRDRKLCFEVIQRLLDVYPQAVVELGDDLVYGICE 179

Query: 193  AIDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKNDDFE 366
            AID EKDPRCLMLTF +   L R+FPD SG   +FS+++F+ILS YFPIYFTH K D  +
Sbjct: 180  AIDEEKDPRCLMLTFSLVGTLGRLFPDPSGPMGNFSSDVFDILSRYFPIYFTHSKGDGLD 239

Query: 367  IKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGAVRMF 546
            I RDDLS+ALM+AF S+P FEP  I             AK+DSLKYL++C+ HY A ++ 
Sbjct: 240  ITRDDLSKALMDAFSSSPLFEPFVIPLLLEKLSSSLPSAKLDSLKYLNSCLRHYEADKVV 299

Query: 547  KHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTN 726
            KH+  IWS LKD +FNLSP  +  ++   S  D++S+ +QIA EALNCL  AIS LN  +
Sbjct: 300  KHSQVIWSNLKDVIFNLSPHRSSLSTYG-SNGDMDSEVNQIADEALNCLQTAISHLNFPD 358

Query: 727  SEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVF 906
             + F+ LI+DD+DI   F SV   + YSG S E   QLS+LGSILSIA+K S  CC+ VF
Sbjct: 359  QDSFLCLIIDDEDIGTRFWSVTSIKKYSGTSTEIHCQLSALGSILSIASKVSIYCCTKVF 418

Query: 907  QKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQDLSP 1086
            QKFF  LM++LGVS    S  C+ +  T S+ LNFGALYL +ELL SCR+LT+ +++ SP
Sbjct: 419  QKFFSCLMDILGVSGKHPSKLCVTDHNTCSDGLNFGALYLSMELLTSCRELTLSSKEFSP 478

Query: 1087 QV---PDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISP 1257
            +V   P S +Y+LK+ S  +  AL S L          EH+ C VKGLQVL TFP   SP
Sbjct: 479  EVISEPRSSFYVLKNISRELCDALGSIL----ETPESEEHVYCAVKGLQVLATFPEIYSP 534

Query: 1258 VSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVER 1437
            VSE  YEDIL  LMS+I  RS +TYLW  +L+ALVQIGL IE   D+ K  SY+K V++R
Sbjct: 535  VSEATYEDILVMLMSIIARRSKETYLWELSLKALVQIGLWIENAHDSAKATSYNKLVIQR 594

Query: 1438 IASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAE 1617
            I S+L  +D   SL+LKL AISEI   G  ++  +++  EEAI S+    +  GN+ +++
Sbjct: 595  IVSMLQSNDSTISLSLKLVAISEISSIGL-YLLRIVQAFEEAIVSNLRACF-EGNLKSSD 652

Query: 1618 ILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMA 1797
            +LVPLL+CYSN+VLP CHT G  + IA+Q A +IWN +E        +  + VLD  MM 
Sbjct: 653  VLVPLLQCYSNQVLPRCHTCGNFNDIAVQVAVSIWNQIENVAVFRSSILMKDVLDQVMMT 712

Query: 1798 MKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIPDMSGLSCKDEW 1977
            MK +V  CTEESQ  +++KAY  L  T F                  I D + +SC+DEW
Sbjct: 713  MKHLVAGCTEESQFLILQKAYGSLPKTFF-IAEPLPCALSQLEGLQCIQDTTLMSCRDEW 771

Query: 1978 LISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAEQP 2157
            + SLF S+VIALRPQTP+ +V  L+ LF + LLKG++ AAQALASM+NKWP +V+++E  
Sbjct: 772  IFSLFGSVVIALRPQTPLVNVKILLNLFVVLLLKGNMLAAQALASMVNKWPADVNKSE-- 829

Query: 2158 SAYNLEETINVVLEN 2202
             +Y+L++ I  +L++
Sbjct: 830  ISYSLDQAIEEILKS 844


>ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Nelumbo nucifera]
 ref|XP_010249498.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Nelumbo nucifera]
          Length = 1160

 Score =  668 bits (1724), Expect = 0.0
 Identities = 354/759 (46%), Positives = 498/759 (65%), Gaps = 9/759 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KS+VG+V+G +A+++ ++YL N++ QSLA  DR LCFE+L+CLLD Y +AV  L D+L+ 
Sbjct: 116  KSSVGMVSGSDARLVGQSYLQNLQVQSLAQHDRMLCFELLECLLDRYSDAVAALGDDLVY 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKN 354
            GI +AIDGEKDPRCLMLTF++ E L  +FP+ SG  ASF+ ++FEIL CYFPI+FTHQ+ 
Sbjct: 176  GICEAIDGEKDPRCLMLTFHLVEVLAWLFPEPSGPLASFAGDIFEILGCYFPIHFTHQQG 235

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            DDF+IKRDDLSRALM AF S+P FEP AI             AK+DS +YLS+C+L YG 
Sbjct: 236  DDFDIKRDDLSRALMLAFSSSPLFEPFAIPLLLEKLSSSLPLAKVDSFRYLSHCVLKYGV 295

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RM KHA AIWS+LKDA+F  S QG +F+  S   + +  +E+ I KEAL CL   I Q 
Sbjct: 296  DRMGKHAKAIWSSLKDAIFTFSLQGNIFSLASDLPDTMGFEENDITKEALICLEKVILQ- 354

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
               N   F+SLI+DD+D+E    SV +  SY+ +S ES+++L + G I+ ++ K S+  C
Sbjct: 355  ---NDGIFLSLIVDDEDVEMILRSVTISNSYNSLSVESKQKLLAFGRIIVVSAKISSSSC 411

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFS-NILNFGALYLCVELLASCRDLTMVA 1071
              +F   FPRLM++LG+S S  S  CI      S   LNFGA+YLC ELLA+CRDL + +
Sbjct: 412  DRIFHFLFPRLMDILGLSSSSLSLECIPYGSPVSFGQLNFGAIYLCTELLAACRDLIVGS 471

Query: 1072 QDLSPQ---VPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFP 1242
            +D++PQ   +  SW  LL+ FSGP+T  L S+LV +        ++   VKGL+ L TFP
Sbjct: 472  EDIAPQSVLMQVSWCCLLQRFSGPLTTFLSSSLVTSMKQENCDANIYSGVKGLRTLATFP 531

Query: 1243 GHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSK 1422
            G   P+S+ I+E+IL   MS++TA  ++T LW+ +L+ALVQIG   EKF D+++  SY  
Sbjct: 532  GWFLPISKSIFENILTVFMSILTAGCEETLLWKLSLKALVQIGTFTEKFHDSERATSYMN 591

Query: 1423 FVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGN 1602
             VV +I S +SLDD     +LKL+AI+EIG +G  FM  VI+GLEEAI ++F ++   GN
Sbjct: 592  IVVGKIVSSISLDDSSMPYSLKLDAIAEIGGSGMHFMLKVIQGLEEAISANFFEASSKGN 651

Query: 1603 VGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLD 1782
            + + E+L+PLLEC+S +VLPW H     + I   F  NIWN ME +T  ++ ++   +LD
Sbjct: 652  LKSVEVLIPLLECFSKKVLPWFHKTSLFEDIVFHFVINIWNQMEANTTFNIGIKANELLD 711

Query: 1783 ATMMAMKLVVGYCTEESQSTLVRKAYNILSSTT--FPQXXXXXXXXXXXXXXXXIPDMSG 1956
             TMM M+  V  C+E++Q  +V+KAYNILSS+     +                  ++  
Sbjct: 712  VTMMVMRQAVADCSEKNQGLIVQKAYNILSSSASFSLKEPMPLSIPLKTEGLQLTQNLQD 771

Query: 1957 LSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGN 2136
             SC+DEWLISLFAS+++ALRPQT +PDV  ++ LF   +LKGH+PAAQAL S+INK P  
Sbjct: 772  FSCRDEWLISLFASVIMALRPQTCLPDVRVVLELFMSVVLKGHVPAAQALGSIINKLPAT 831

Query: 2137 VSRAEQPSAYNLEETINVVLE-NLSAILSSSPLKECKIV 2250
            +   E   A  LEE + ++ + NL ++  +S  ++C ++
Sbjct: 832  IDSVEVSRACTLEEAMVIISKMNLWSVNGNSSFRKCNVI 870


>gb|OVA08536.1| RNAPII transcription regulator C-terminal [Macleaya cordata]
          Length = 1187

 Score =  668 bits (1724), Expect = 0.0
 Identities = 361/760 (47%), Positives = 497/760 (65%), Gaps = 6/760 (0%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KS  GVV   +AK L ++YL N++ QSLA  DRKLCFE+L+CLLD YP  V TL D+LI 
Sbjct: 116  KSTAGVVIDSDAKALVQSYLQNIQVQSLAKDDRKLCFEMLECLLDRYPATVATLGDDLIY 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKN 354
            GI +AIDGEKDP CLM+ F++ E L ++FPD SG  A F+ E+F++L  YFPI+FTH  N
Sbjct: 176  GICEAIDGEKDPECLMVMFHLVEVLAQLFPDPSGPLAGFAEEVFDVLGRYFPIHFTHPIN 235

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            +++ +KRDDLSRALM AF STP FEP AI             AK+DSLKYLSNC++ YGA
Sbjct: 236  NEYGVKRDDLSRALMLAFSSTPLFEPFAIPLLLEKLSSSLPAAKVDSLKYLSNCLVKYGA 295

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             ++ KHA AIWS+LKDA+   S Q  +F+ VS+  + +  QE++IAKEAL CL   I Q 
Sbjct: 296  DKVEKHAKAIWSSLKDAICTSSSQDPIFSIVSQKQDGIGFQENEIAKEALVCLQKFILQ- 354

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
               +    +SLIL D++IE    SV   + Y+ I KES+++L ++G +LSI+ K ST CC
Sbjct: 355  ---DDVLVLSLILGDEEIETILSSVTSIKRYNDIPKESKQKLHAVGCMLSISAKVSTPCC 411

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDLTMVAQ 1074
            + VFQKFF RLM++LG+S   SS          S  LNFGALYLC+ELL +CR   M ++
Sbjct: 412  NKVFQKFFCRLMDILGISTESSSRGISDGTHELSEELNFGALYLCIELLDACRCSVMGSK 471

Query: 1075 DLSPQ---VPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPG 1245
            + SPQ     ++W  L+ DFSGP+T AL   L  +    T    + C VKGLQ+L TFPG
Sbjct: 472  EHSPQPVSAEETWCCLITDFSGPLTGALHYILGTSMNGNTSEADIHCGVKGLQILATFPG 531

Query: 1246 HISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKF 1425
               P+S+ I+E IL   +SVI+   +DT LWR TL AL ++G+ I++  D++K LS+   
Sbjct: 532  GSLPISKSIFESILTIFVSVISDSREDTLLWRLTLNALKEVGIFIDELHDSEKVLSFMTI 591

Query: 1426 VVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNV 1605
            VVE++ SL+SL +    L L+LEAIS +G AG +FM   I+ LEEAI  +F  + V+GN+
Sbjct: 592  VVEKVISLISLSESSMPLPLRLEAISVVGAAGQNFMLRAIQVLEEAISENFFYASVDGNL 651

Query: 1606 GAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDA 1785
             +AEILVPLLECYSN+VLPW H  G  + +A +FA +IWN +E +   ++ +QR+ +L  
Sbjct: 652  KSAEILVPLLECYSNKVLPWFHNSGDFEDVAFRFAVSIWNQVESNKTFNIGVQRKELLGE 711

Query: 1786 TMMAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIPDMSGLSC 1965
             M AM+L V  C+E+ Q  +V+KAY++L+S+TF                     +  LSC
Sbjct: 712  MMTAMRLAVAGCSEDIQGLIVQKAYSVLASSTFFPLKDVFSVPAKLEELQLTKVVDSLSC 771

Query: 1966 KDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSR 2145
            +DEWLISLFAS++IALRP+TP+ +V  +++LFTI LLKGH+PAAQAL S+ NK P N++ 
Sbjct: 772  RDEWLISLFASVIIALRPRTPLVNVRVILKLFTIVLLKGHVPAAQALGSITNKLPLNINS 831

Query: 2146 AEQPSAYNLEETINVVLE-NLSAILSSSPLKECKIVNDTD 2262
             E  SA  LEE ++V+    L +   S P ++   ++  D
Sbjct: 832  VEVSSACTLEEAMDVIFNMGLQSASDSGPSRKGSAMDGGD 871


>ref|XP_019052369.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Nelumbo nucifera]
          Length = 1040

 Score =  660 bits (1704), Expect = 0.0
 Identities = 350/754 (46%), Positives = 493/754 (65%), Gaps = 9/754 (1%)
 Frame = +1

Query: 16   VVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELISGILDA 195
            +V+G +A+++ ++YL N++ QSLA  DR LCFE+L+CLLD Y +AV  L D+L+ GI +A
Sbjct: 1    MVSGSDARLVGQSYLQNLQVQSLAQHDRMLCFELLECLLDRYSDAVAALGDDLVYGICEA 60

Query: 196  IDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKNDDFEI 369
            IDGEKDPRCLMLTF++ E L  +FP+ SG  ASF+ ++FEIL CYFPI+FTHQ+ DDF+I
Sbjct: 61   IDGEKDPRCLMLTFHLVEVLAWLFPEPSGPLASFAGDIFEILGCYFPIHFTHQQGDDFDI 120

Query: 370  KRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGAVRMFK 549
            KRDDLSRALM AF S+P FEP AI             AK+DS +YLS+C+L YG  RM K
Sbjct: 121  KRDDLSRALMLAFSSSPLFEPFAIPLLLEKLSSSLPLAKVDSFRYLSHCVLKYGVDRMGK 180

Query: 550  HANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQLNCTNS 729
            HA AIWS+LKDA+F  S QG +F+  S   + +  +E+ I KEAL CL   I Q    N 
Sbjct: 181  HAKAIWSSLKDAIFTFSLQGNIFSLASDLPDTMGFEENDITKEALICLEKVILQ----ND 236

Query: 730  EPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCCSIVFQ 909
              F+SLI+DD+D+E    SV +  SY+ +S ES+++L + G I+ ++ K S+  C  +F 
Sbjct: 237  GIFLSLIVDDEDVEMILRSVTISNSYNSLSVESKQKLLAFGRIIVVSAKISSSSCDRIFH 296

Query: 910  KFFPRLMNVLGVSMSDSSHSCIKECKTFS-NILNFGALYLCVELLASCRDLTMVAQDLSP 1086
              FPRLM++LG+S S  S  CI      S   LNFGA+YLC ELLA+CRDL + ++D++P
Sbjct: 297  FLFPRLMDILGLSSSSLSLECIPYGSPVSFGQLNFGAIYLCTELLAACRDLIVGSEDIAP 356

Query: 1087 Q---VPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFPGHISP 1257
            Q   +  SW  LL+ FSGP+T  L S+LV +        ++   VKGL+ L TFPG   P
Sbjct: 357  QSVLMQVSWCCLLQRFSGPLTTFLSSSLVTSMKQENCDANIYSGVKGLRTLATFPGWFLP 416

Query: 1258 VSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSKFVVER 1437
            +S+ I+E+IL   MS++TA  ++T LW+ +L+ALVQIG   EKF D+++  SY   VV +
Sbjct: 417  ISKSIFENILTVFMSILTAGCEETLLWKLSLKALVQIGTFTEKFHDSERATSYMNIVVGK 476

Query: 1438 IASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGNVGAAE 1617
            I S +SLDD     +LKL+AI+EIG +G  FM  VI+GLEEAI ++F ++   GN+ + E
Sbjct: 477  IVSSISLDDSSMPYSLKLDAIAEIGGSGMHFMLKVIQGLEEAISANFFEASSKGNLKSVE 536

Query: 1618 ILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLDATMMA 1797
            +L+PLLEC+S +VLPW H     + I   F  NIWN ME +T  ++ ++   +LD TMM 
Sbjct: 537  VLIPLLECFSKKVLPWFHKTSLFEDIVFHFVINIWNQMEANTTFNIGIKANELLDVTMMV 596

Query: 1798 MKLVVGYCTEESQSTLVRKAYNILSSTT--FPQXXXXXXXXXXXXXXXXIPDMSGLSCKD 1971
            M+  V  C+E++Q  +V+KAYNILSS+     +                  ++   SC+D
Sbjct: 597  MRQAVADCSEKNQGLIVQKAYNILSSSASFSLKEPMPLSIPLKTEGLQLTQNLQDFSCRD 656

Query: 1972 EWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGNVSRAE 2151
            EWLISLFAS+++ALRPQT +PDV  ++ LF   +LKGH+PAAQAL S+INK P  +   E
Sbjct: 657  EWLISLFASVIMALRPQTCLPDVRVVLELFMSVVLKGHVPAAQALGSIINKLPATIDSVE 716

Query: 2152 QPSAYNLEETINVVLE-NLSAILSSSPLKECKIV 2250
               A  LEE + ++ + NL ++  +S  ++C ++
Sbjct: 717  VSRACTLEEAMVIISKMNLWSVNGNSSFRKCNVI 750


>emb|CBI36057.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1146

 Score =  626 bits (1614), Expect = 0.0
 Identities = 349/756 (46%), Positives = 481/756 (63%), Gaps = 9/756 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KSN+G VT  +A+ +A+ YL NV+ QSL   DRKLCFE+L+CLLD YPE+V +L D+L+ 
Sbjct: 116  KSNMGRVTDNDARAVAQAYLENVQVQSLGQHDRKLCFEILECLLDHYPESVASLGDDLVY 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKN 354
            GI  AIDGEKDPRCLMLTF+I E L R+FPD SG  ASF+ +LF+IL CYFPI+FTH + 
Sbjct: 176  GICGAIDGEKDPRCLMLTFHIVEILARLFPDPSGPLASFAGDLFDILGCYFPIHFTHPQG 235

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            +D ++KRDDLSRALM AF ST  FEP AI             AK+DSLKYLSNC+L YG 
Sbjct: 236  EDVDVKRDDLSRALMLAFSSTTLFEPFAIPLLLEKLSSSLPLAKVDSLKYLSNCLLKYGD 295

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RM KH  AIW ++KDA+F  S Q  M +  S+  + V  QE++I  EA+  L   I + 
Sbjct: 296  DRMTKHVEAIWFSVKDAIF-CSEQEPMLSLASELLDHVGFQENEIVTEAIILLQKVILE- 353

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
               NS   +SLI+ D+DI     +V   RSY+ I  +S+ +L ++G IL ++ K S  CC
Sbjct: 354  ---NSGLSLSLIVGDKDINTIVNTVTSFRSYNDIPLQSKHKLCAIGRILYVSAKASITCC 410

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECK-TFSNILNFGALYLCVELLASCRDLTMVA 1071
            + VF+ FF RLM+ LG+S+ +SS  C+      FS  LNFGALYLC+ELLA+CRDL + +
Sbjct: 411  NRVFESFFFRLMDTLGLSVRNSSGDCLPNFDYVFSERLNFGALYLCIELLAACRDLVVGS 470

Query: 1072 QDL---SPQVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTFP 1242
            ++L   S    +SW  +L  FS  +  A  S L  +         +   VKGLQ+L TFP
Sbjct: 471  EELTSKSVSAQESWCCMLHSFSSLLMKAFSSVLDASTDKDAYEADIYSGVKGLQILATFP 530

Query: 1243 GHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYSK 1422
            G   P+S+ I+E++L   +S+I    + T LW+  L+ALVQIG  I++F +++K LSY+ 
Sbjct: 531  GEFLPISKSIFENVLLTFISIIVEDFNKTLLWKLALKALVQIGSFIDRFHESEKALSYNY 590

Query: 1423 FVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNGN 1602
             VVE+I SL+ LDD      L+LEAIS+IG  G + M  +++GLE+AIF++ S+ YV+GN
Sbjct: 591  IVVEKIVSLMFLDDFGLPFQLRLEAISDIGTTGLNVMLKIVQGLEDAIFANLSEVYVHGN 650

Query: 1603 VGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVLD 1782
            + +A+I V LLECYSN++LP  H  G  + +  +FA NIWN +E S   SV  Q   +L+
Sbjct: 651  LKSAKIAVQLLECYSNKLLPGIHGAGDFEDVLSRFAVNIWNQIENSMAFSVGAQENELLN 710

Query: 1783 ATMMAMKLVVGYCTEESQSTLVRKAYNILSS--TTFPQXXXXXXXXXXXXXXXXIPDMSG 1956
            ATM AMKL VG C+E SQ  +++KAY++LSS  +                      D+  
Sbjct: 711  ATMTAMKLAVGSCSEGSQGKIIKKAYSVLSSCPSFTLMESMPITGTVQLEGLQHTQDLEC 770

Query: 1957 LSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPGN 2136
             SC+D+W+ISLFAS +IA+RPQT IP++  ++ LF   LLKGH+PAAQAL SM+NK    
Sbjct: 771  FSCRDKWVISLFASAIIAVRPQTHIPNIRVVLHLFMTNLLKGHVPAAQALGSMVNKLCPK 830

Query: 2137 VSRAEQPSAYNLEETINVVLE-NLSAILSSSPLKEC 2241
             +  E  S   LE+ ++++   +L    +  PLK C
Sbjct: 831  SNGVEISSTCTLEDALDIIFNTSLWDSHNHGPLKRC 866


>ref|XP_023921854.1| MMS19 nucleotide excision repair protein homolog isoform X4 [Quercus
            suber]
          Length = 1038

 Score =  620 bits (1599), Expect = 0.0
 Identities = 349/742 (47%), Positives = 487/742 (65%), Gaps = 9/742 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KS+ GV+T  +AK +AE++L N++ QSL   DRKLCFE+L+CLL+ YP  V  + DELI 
Sbjct: 4    KSSAGVITSTDAKAVAESFLQNLQVQSLGQHDRKLCFELLECLLERYPNTVTPMGDELIY 63

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKN 354
            GI +A+D EKDP+CLMLTF+I E L+++FPD SG  ASF+ +LFEILSCYFPI+FTH + 
Sbjct: 64   GICEAVDSEKDPQCLMLTFHIVEVLVQLFPDTSGPFASFAGDLFEILSCYFPIHFTHPRG 123

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            +D  IKRDDLS+ALM AF STP FEP AI             AK+DSLKYLS+C  +YG 
Sbjct: 124  EDLGIKRDDLSQALMLAFSSTPLFEPFAIPLLLEKLSSSLPSAKLDSLKYLSSCTSNYGP 183

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RM KHA AIW ++KDA++    + T+ +  S+S + +  QE++IAKEAL  L   I Q 
Sbjct: 184  ERMAKHARAIWLSIKDALYTSLQEPTL-SFTSESLDGLVFQENEIAKEALTLLQQVIMQ- 241

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
               N+  F+SLI++D+DI     +V    SY+ I  + + +L + G ILSI+TKTS  CC
Sbjct: 242  ---NNGLFLSLIVEDEDINIILNTVPTYESYNDIPLQGKLKLFAAGCILSISTKTSVACC 298

Query: 895  SIVFQKFFPRLMNVLGVSMSDSS--HSCIKECKTFSNILNFGALYLCVELLASCRDLTMV 1068
            +++F+ FFPRLM +LG+S  + S  HS  K+    S  LNFGALYL VELLA+CRDL   
Sbjct: 299  NMIFESFFPRLMEILGLSEKNLSGDHSP-KDNYLISKRLNFGALYLSVELLAACRDLIAG 357

Query: 1069 AQDL---SPQVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTF 1239
            +  +   S    ++ + +L  FS  VT A  S LV +    T    +   VKGLQ+L TF
Sbjct: 358  STQIACKSVSTYETSYCMLHSFSNLVTKAFCSTLVTS----THDADIYFGVKGLQILATF 413

Query: 1240 PGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYS 1419
            PG +SPV    +E+IL   MS+IT     T LWR  L+AL+ IG  I++ ++++K LSY 
Sbjct: 414  PGDVSPVPISEFENILITFMSIITVNFKKTLLWRLALKALMNIGSFIDRNNESEKILSYM 473

Query: 1420 KFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNG 1599
              VVE+I SL+SLDDV     LKLEAIS IG +G ++M  +I+G EEA+F++ S+ YV+G
Sbjct: 474  PIVVEKIVSLVSLDDVTMPFPLKLEAISGIGTSGLNYMLHIIQGFEEALFANLSEIYVHG 533

Query: 1600 NVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVL 1779
            N+ +A+I + LLECYSN++LPW H  G  +++ L+F  NIW  +E   + SV    + +L
Sbjct: 534  NLKSAKITIWLLECYSNKLLPWIHDNGVFEEVLLRFPINIWKQIESCVDFSV--PEKELL 591

Query: 1780 DATMMAMKLVVGYCTEESQSTLVRKAYNIL-SSTTFPQXXXXXXXXXXXXXXXXIPD-MS 1953
            DA M AMK  V +C+EESQ+ +++KAYN+L SST+FP                 +   M 
Sbjct: 592  DAMMTAMKHAVAFCSEESQNEIIQKAYNVLSSSTSFPLKESMALTIPFQLEGLQLTQKMD 651

Query: 1954 GLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPG 2133
             L C++EW++SLFAS+VIA+RPQT IP+V  ++ LF   LLKGH+PAAQAL S++NK+  
Sbjct: 652  NLLCRNEWILSLFASVVIAVRPQTHIPNVKVILNLFITTLLKGHVPAAQALGSIVNKFGK 711

Query: 2134 NVSRAEQPSAYNLEETINVVLE 2199
            + + +E  S   LEE ++++ +
Sbjct: 712  SSTGSEISSDCTLEEALDIIFQ 733


>ref|XP_023921853.1| MMS19 nucleotide excision repair protein homolog isoform X3 [Quercus
            suber]
          Length = 1062

 Score =  620 bits (1599), Expect = 0.0
 Identities = 349/742 (47%), Positives = 487/742 (65%), Gaps = 9/742 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KS+ GV+T  +AK +AE++L N++ QSL   DRKLCFE+L+CLL+ YP  V  + DELI 
Sbjct: 28   KSSAGVITSTDAKAVAESFLQNLQVQSLGQHDRKLCFELLECLLERYPNTVTPMGDELIY 87

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKN 354
            GI +A+D EKDP+CLMLTF+I E L+++FPD SG  ASF+ +LFEILSCYFPI+FTH + 
Sbjct: 88   GICEAVDSEKDPQCLMLTFHIVEVLVQLFPDTSGPFASFAGDLFEILSCYFPIHFTHPRG 147

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            +D  IKRDDLS+ALM AF STP FEP AI             AK+DSLKYLS+C  +YG 
Sbjct: 148  EDLGIKRDDLSQALMLAFSSTPLFEPFAIPLLLEKLSSSLPSAKLDSLKYLSSCTSNYGP 207

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RM KHA AIW ++KDA++    + T+ +  S+S + +  QE++IAKEAL  L   I Q 
Sbjct: 208  ERMAKHARAIWLSIKDALYTSLQEPTL-SFTSESLDGLVFQENEIAKEALTLLQQVIMQ- 265

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
               N+  F+SLI++D+DI     +V    SY+ I  + + +L + G ILSI+TKTS  CC
Sbjct: 266  ---NNGLFLSLIVEDEDINIILNTVPTYESYNDIPLQGKLKLFAAGCILSISTKTSVACC 322

Query: 895  SIVFQKFFPRLMNVLGVSMSDSS--HSCIKECKTFSNILNFGALYLCVELLASCRDLTMV 1068
            +++F+ FFPRLM +LG+S  + S  HS  K+    S  LNFGALYL VELLA+CRDL   
Sbjct: 323  NMIFESFFPRLMEILGLSEKNLSGDHSP-KDNYLISKRLNFGALYLSVELLAACRDLIAG 381

Query: 1069 AQDL---SPQVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTF 1239
            +  +   S    ++ + +L  FS  VT A  S LV +    T    +   VKGLQ+L TF
Sbjct: 382  STQIACKSVSTYETSYCMLHSFSNLVTKAFCSTLVTS----THDADIYFGVKGLQILATF 437

Query: 1240 PGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYS 1419
            PG +SPV    +E+IL   MS+IT     T LWR  L+AL+ IG  I++ ++++K LSY 
Sbjct: 438  PGDVSPVPISEFENILITFMSIITVNFKKTLLWRLALKALMNIGSFIDRNNESEKILSYM 497

Query: 1420 KFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNG 1599
              VVE+I SL+SLDDV     LKLEAIS IG +G ++M  +I+G EEA+F++ S+ YV+G
Sbjct: 498  PIVVEKIVSLVSLDDVTMPFPLKLEAISGIGTSGLNYMLHIIQGFEEALFANLSEIYVHG 557

Query: 1600 NVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVL 1779
            N+ +A+I + LLECYSN++LPW H  G  +++ L+F  NIW  +E   + SV    + +L
Sbjct: 558  NLKSAKITIWLLECYSNKLLPWIHDNGVFEEVLLRFPINIWKQIESCVDFSV--PEKELL 615

Query: 1780 DATMMAMKLVVGYCTEESQSTLVRKAYNIL-SSTTFPQXXXXXXXXXXXXXXXXIPD-MS 1953
            DA M AMK  V +C+EESQ+ +++KAYN+L SST+FP                 +   M 
Sbjct: 616  DAMMTAMKHAVAFCSEESQNEIIQKAYNVLSSSTSFPLKESMALTIPFQLEGLQLTQKMD 675

Query: 1954 GLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPG 2133
             L C++EW++SLFAS+VIA+RPQT IP+V  ++ LF   LLKGH+PAAQAL S++NK+  
Sbjct: 676  NLLCRNEWILSLFASVVIAVRPQTHIPNVKVILNLFITTLLKGHVPAAQALGSIVNKFGK 735

Query: 2134 NVSRAEQPSAYNLEETINVVLE 2199
            + + +E  S   LEE ++++ +
Sbjct: 736  SSTGSEISSDCTLEEALDIIFQ 757


>ref|XP_020676947.1| MMS19 nucleotide excision repair protein homolog isoform X5
            [Dendrobium catenatum]
          Length = 1085

 Score =  620 bits (1598), Expect = 0.0
 Identities = 345/784 (44%), Positives = 488/784 (62%), Gaps = 12/784 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KSNVG++   +A+ LA++ L NV+ Q LAM DRKLCFEV QCLLD + +++ +L D+ + 
Sbjct: 116  KSNVGMLADNDARTLAQSMLDNVQVQLLAMHDRKLCFEVFQCLLDAHSDSIASLGDDFVY 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSGASF-STELFEILSCYFPIYFTHQKND 357
            G++ A+D EKDPRCL+LTF++ ++L+++F  Q G+   + +LFE+LSCYFP+YFTH+  D
Sbjct: 176  GLIQAVDQEKDPRCLVLTFHLVQSLVKLFLSQLGSEHVAQDLFEVLSCYFPVYFTHKIAD 235

Query: 358  DFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGAV 537
            DFE+KR+DLS ALM+AFCSTPYFEP AI             AKIDSLKYL+ C+L++G  
Sbjct: 236  DFEVKREDLSDALMDAFCSTPYFEPFAIPLLLDKLSSSLPLAKIDSLKYLNKCLLNFGTE 295

Query: 538  RMFKHANAIWSALKDAVFNLSPQGTMF-ASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
            RM +HA  IW ALKD + N  PQ  +  +SVS    D++  E +IA EAL CL   I Q 
Sbjct: 296  RMLQHAQNIWFALKDVILNHLPQAEILSSSVSVLGGDIKYHEHKIATEALICLKTTILQF 355

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
             C N+  F++LI+DD  +ER+F SV +E SYS    ++  +LS+LGSILS+   +S   C
Sbjct: 356  TCPNNVDFLTLIIDDNVVERSFCSVTMEGSYSDNDDKNDLKLSALGSILSVVANSSIFGC 415

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDL---TM 1065
            + VFQ FFPRLM  LG+ +  S HS     +  S   N+GALYL VELLAS RDL    +
Sbjct: 416  NRVFQDFFPRLMVALGIDLRTSKHSADAYVEIVSQKFNYGALYLSVELLASSRDLIATVL 475

Query: 1066 VAQDLSPQVPDSWWYLLKDFSGPVTFALKSALV--NTGTAATG-----PEHMSCVVKGLQ 1224
             + +    +   WW+L+++FSGP+T A KSAL+  N  TA  G      E + C VKGL+
Sbjct: 476  ESSNSKDSLRGIWWHLIQEFSGPLTSAFKSALMIPNKITAEGGNSNYMQEIIICSVKGLE 535

Query: 1225 VLTTFPGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKK 1404
            VL T+ G  +PV    +EDIL   + +I +R +D +LW+ +L++LV IG  I +F D+  
Sbjct: 536  VLATYAGEHTPVPRKSFEDILEVFILIIISRYEDPFLWKLSLKSLVLIGSCIARFKDSNM 595

Query: 1405 QLSYSKFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSD 1584
            Q+ Y++ VV R+  LL  D ++  L L LEAISEIG    D +S VI+GLEEA+ SSF  
Sbjct: 596  QMIYNEIVVRRLVRLLHKDSIL-PLDLILEAISEIGTCTLDLISPVIQGLEEAMLSSFLQ 654

Query: 1585 SYVNGNVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQ 1764
            + V+ +  +++ LV  L+CY  ++LPWCHT G  +Q  + F  NI   ME +    +  +
Sbjct: 655  ACVDESFKSSQDLVLFLDCYCTKILPWCHTSGSIEQPGMHFVINILEQMEDNIAFKMKPE 714

Query: 1765 RQGVLDATMMAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIP 1944
             Q +LD  MM MKLVV  C E +Q  ++ KAYNI+ ++                    IP
Sbjct: 715  MQDLLDKMMMTMKLVVRGCAENNQYIILEKAYNIMLASANLPSNALLVSSSILEGFQLIP 774

Query: 1945 DMSGLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINK 2124
            D   LSCK++ L+   AS+V AL  QTP+ +V  L+ L  +F LKGHLPAAQALAS+ NK
Sbjct: 775  DFCELSCKNKMLLYFLASIVTALHQQTPLTNVARLLNLLLVFTLKGHLPAAQALASVANK 834

Query: 2125 WPGNVSRAEQPSAYNLEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXXQIH 2304
                      P+A  LEETI ++L++ S++LS++   E  ++N ++D          QI+
Sbjct: 835  ---------LPNAVILEETIEMILDSFSSVLSNNHQNEPHMLN-SNDGASMHFCSNLQIN 884

Query: 2305 GVVG 2316
             V+G
Sbjct: 885  AVIG 888


>ref|XP_020676946.1| MMS19 nucleotide excision repair protein homolog isoform X4
            [Dendrobium catenatum]
          Length = 1128

 Score =  620 bits (1598), Expect = 0.0
 Identities = 345/784 (44%), Positives = 488/784 (62%), Gaps = 12/784 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KSNVG++   +A+ LA++ L NV+ Q LAM DRKLCFEV QCLLD + +++ +L D+ + 
Sbjct: 116  KSNVGMLADNDARTLAQSMLDNVQVQLLAMHDRKLCFEVFQCLLDAHSDSIASLGDDFVY 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSGASF-STELFEILSCYFPIYFTHQKND 357
            G++ A+D EKDPRCL+LTF++ ++L+++F  Q G+   + +LFE+LSCYFP+YFTH+  D
Sbjct: 176  GLIQAVDQEKDPRCLVLTFHLVQSLVKLFLSQLGSEHVAQDLFEVLSCYFPVYFTHKIAD 235

Query: 358  DFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGAV 537
            DFE+KR+DLS ALM+AFCSTPYFEP AI             AKIDSLKYL+ C+L++G  
Sbjct: 236  DFEVKREDLSDALMDAFCSTPYFEPFAIPLLLDKLSSSLPLAKIDSLKYLNKCLLNFGTE 295

Query: 538  RMFKHANAIWSALKDAVFNLSPQGTMF-ASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
            RM +HA  IW ALKD + N  PQ  +  +SVS    D++  E +IA EAL CL   I Q 
Sbjct: 296  RMLQHAQNIWFALKDVILNHLPQAEILSSSVSVLGGDIKYHEHKIATEALICLKTTILQF 355

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
             C N+  F++LI+DD  +ER+F SV +E SYS    ++  +LS+LGSILS+   +S   C
Sbjct: 356  TCPNNVDFLTLIIDDNVVERSFCSVTMEGSYSDNDDKNDLKLSALGSILSVVANSSIFGC 415

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDL---TM 1065
            + VFQ FFPRLM  LG+ +  S HS     +  S   N+GALYL VELLAS RDL    +
Sbjct: 416  NRVFQDFFPRLMVALGIDLRTSKHSADAYVEIVSQKFNYGALYLSVELLASSRDLIATVL 475

Query: 1066 VAQDLSPQVPDSWWYLLKDFSGPVTFALKSALV--NTGTAATG-----PEHMSCVVKGLQ 1224
             + +    +   WW+L+++FSGP+T A KSAL+  N  TA  G      E + C VKGL+
Sbjct: 476  ESSNSKDSLRGIWWHLIQEFSGPLTSAFKSALMIPNKITAEGGNSNYMQEIIICSVKGLE 535

Query: 1225 VLTTFPGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKK 1404
            VL T+ G  +PV    +EDIL   + +I +R +D +LW+ +L++LV IG  I +F D+  
Sbjct: 536  VLATYAGEHTPVPRKSFEDILEVFILIIISRYEDPFLWKLSLKSLVLIGSCIARFKDSNM 595

Query: 1405 QLSYSKFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSD 1584
            Q+ Y++ VV R+  LL  D ++  L L LEAISEIG    D +S VI+GLEEA+ SSF  
Sbjct: 596  QMIYNEIVVRRLVRLLHKDSIL-PLDLILEAISEIGTCTLDLISPVIQGLEEAMLSSFLQ 654

Query: 1585 SYVNGNVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQ 1764
            + V+ +  +++ LV  L+CY  ++LPWCHT G  +Q  + F  NI   ME +    +  +
Sbjct: 655  ACVDESFKSSQDLVLFLDCYCTKILPWCHTSGSIEQPGMHFVINILEQMEDNIAFKMKPE 714

Query: 1765 RQGVLDATMMAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIP 1944
             Q +LD  MM MKLVV  C E +Q  ++ KAYNI+ ++                    IP
Sbjct: 715  MQDLLDKMMMTMKLVVRGCAENNQYIILEKAYNIMLASANLPSNALLVSSSILEGFQLIP 774

Query: 1945 DMSGLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINK 2124
            D   LSCK++ L+   AS+V AL  QTP+ +V  L+ L  +F LKGHLPAAQALAS+ NK
Sbjct: 775  DFCELSCKNKMLLYFLASIVTALHQQTPLTNVARLLNLLLVFTLKGHLPAAQALASVANK 834

Query: 2125 WPGNVSRAEQPSAYNLEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXXQIH 2304
                      P+A  LEETI ++L++ S++LS++   E  ++N ++D          QI+
Sbjct: 835  ---------LPNAVILEETIEMILDSFSSVLSNNHQNEPHMLN-SNDGASMHFCSNLQIN 884

Query: 2305 GVVG 2316
             V+G
Sbjct: 885  AVIG 888


>ref|XP_023921852.1| MMS19 nucleotide excision repair protein homolog isoform X2 [Quercus
            suber]
          Length = 1150

 Score =  620 bits (1599), Expect = 0.0
 Identities = 349/742 (47%), Positives = 487/742 (65%), Gaps = 9/742 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KS+ GV+T  +AK +AE++L N++ QSL   DRKLCFE+L+CLL+ YP  V  + DELI 
Sbjct: 116  KSSAGVITSTDAKAVAESFLQNLQVQSLGQHDRKLCFELLECLLERYPNTVTPMGDELIY 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKN 354
            GI +A+D EKDP+CLMLTF+I E L+++FPD SG  ASF+ +LFEILSCYFPI+FTH + 
Sbjct: 176  GICEAVDSEKDPQCLMLTFHIVEVLVQLFPDTSGPFASFAGDLFEILSCYFPIHFTHPRG 235

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            +D  IKRDDLS+ALM AF STP FEP AI             AK+DSLKYLS+C  +YG 
Sbjct: 236  EDLGIKRDDLSQALMLAFSSTPLFEPFAIPLLLEKLSSSLPSAKLDSLKYLSSCTSNYGP 295

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RM KHA AIW ++KDA++    + T+ +  S+S + +  QE++IAKEAL  L   I Q 
Sbjct: 296  ERMAKHARAIWLSIKDALYTSLQEPTL-SFTSESLDGLVFQENEIAKEALTLLQQVIMQ- 353

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
               N+  F+SLI++D+DI     +V    SY+ I  + + +L + G ILSI+TKTS  CC
Sbjct: 354  ---NNGLFLSLIVEDEDINIILNTVPTYESYNDIPLQGKLKLFAAGCILSISTKTSVACC 410

Query: 895  SIVFQKFFPRLMNVLGVSMSDSS--HSCIKECKTFSNILNFGALYLCVELLASCRDLTMV 1068
            +++F+ FFPRLM +LG+S  + S  HS  K+    S  LNFGALYL VELLA+CRDL   
Sbjct: 411  NMIFESFFPRLMEILGLSEKNLSGDHSP-KDNYLISKRLNFGALYLSVELLAACRDLIAG 469

Query: 1069 AQDL---SPQVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTF 1239
            +  +   S    ++ + +L  FS  VT A  S LV +    T    +   VKGLQ+L TF
Sbjct: 470  STQIACKSVSTYETSYCMLHSFSNLVTKAFCSTLVTS----THDADIYFGVKGLQILATF 525

Query: 1240 PGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYS 1419
            PG +SPV    +E+IL   MS+IT     T LWR  L+AL+ IG  I++ ++++K LSY 
Sbjct: 526  PGDVSPVPISEFENILITFMSIITVNFKKTLLWRLALKALMNIGSFIDRNNESEKILSYM 585

Query: 1420 KFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNG 1599
              VVE+I SL+SLDDV     LKLEAIS IG +G ++M  +I+G EEA+F++ S+ YV+G
Sbjct: 586  PIVVEKIVSLVSLDDVTMPFPLKLEAISGIGTSGLNYMLHIIQGFEEALFANLSEIYVHG 645

Query: 1600 NVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVL 1779
            N+ +A+I + LLECYSN++LPW H  G  +++ L+F  NIW  +E   + SV    + +L
Sbjct: 646  NLKSAKITIWLLECYSNKLLPWIHDNGVFEEVLLRFPINIWKQIESCVDFSV--PEKELL 703

Query: 1780 DATMMAMKLVVGYCTEESQSTLVRKAYNIL-SSTTFPQXXXXXXXXXXXXXXXXIPD-MS 1953
            DA M AMK  V +C+EESQ+ +++KAYN+L SST+FP                 +   M 
Sbjct: 704  DAMMTAMKHAVAFCSEESQNEIIQKAYNVLSSSTSFPLKESMALTIPFQLEGLQLTQKMD 763

Query: 1954 GLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPG 2133
             L C++EW++SLFAS+VIA+RPQT IP+V  ++ LF   LLKGH+PAAQAL S++NK+  
Sbjct: 764  NLLCRNEWILSLFASVVIAVRPQTHIPNVKVILNLFITTLLKGHVPAAQALGSIVNKFGK 823

Query: 2134 NVSRAEQPSAYNLEETINVVLE 2199
            + + +E  S   LEE ++++ +
Sbjct: 824  SSTGSEISSDCTLEEALDIIFQ 845


>ref|XP_020676943.1| MMS19 nucleotide excision repair protein homolog isoform X2
            [Dendrobium catenatum]
 ref|XP_020676944.1| MMS19 nucleotide excision repair protein homolog isoform X2
            [Dendrobium catenatum]
          Length = 1139

 Score =  620 bits (1598), Expect = 0.0
 Identities = 345/784 (44%), Positives = 488/784 (62%), Gaps = 12/784 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KSNVG++   +A+ LA++ L NV+ Q LAM DRKLCFEV QCLLD + +++ +L D+ + 
Sbjct: 116  KSNVGMLADNDARTLAQSMLDNVQVQLLAMHDRKLCFEVFQCLLDAHSDSIASLGDDFVY 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSGASF-STELFEILSCYFPIYFTHQKND 357
            G++ A+D EKDPRCL+LTF++ ++L+++F  Q G+   + +LFE+LSCYFP+YFTH+  D
Sbjct: 176  GLIQAVDQEKDPRCLVLTFHLVQSLVKLFLSQLGSEHVAQDLFEVLSCYFPVYFTHKIAD 235

Query: 358  DFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGAV 537
            DFE+KR+DLS ALM+AFCSTPYFEP AI             AKIDSLKYL+ C+L++G  
Sbjct: 236  DFEVKREDLSDALMDAFCSTPYFEPFAIPLLLDKLSSSLPLAKIDSLKYLNKCLLNFGTE 295

Query: 538  RMFKHANAIWSALKDAVFNLSPQGTMF-ASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
            RM +HA  IW ALKD + N  PQ  +  +SVS    D++  E +IA EAL CL   I Q 
Sbjct: 296  RMLQHAQNIWFALKDVILNHLPQAEILSSSVSVLGGDIKYHEHKIATEALICLKTTILQF 355

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
             C N+  F++LI+DD  +ER+F SV +E SYS    ++  +LS+LGSILS+   +S   C
Sbjct: 356  TCPNNVDFLTLIIDDNVVERSFCSVTMEGSYSDNDDKNDLKLSALGSILSVVANSSIFGC 415

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDL---TM 1065
            + VFQ FFPRLM  LG+ +  S HS     +  S   N+GALYL VELLAS RDL    +
Sbjct: 416  NRVFQDFFPRLMVALGIDLRTSKHSADAYVEIVSQKFNYGALYLSVELLASSRDLIATVL 475

Query: 1066 VAQDLSPQVPDSWWYLLKDFSGPVTFALKSALV--NTGTAATG-----PEHMSCVVKGLQ 1224
             + +    +   WW+L+++FSGP+T A KSAL+  N  TA  G      E + C VKGL+
Sbjct: 476  ESSNSKDSLRGIWWHLIQEFSGPLTSAFKSALMIPNKITAEGGNSNYMQEIIICSVKGLE 535

Query: 1225 VLTTFPGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKK 1404
            VL T+ G  +PV    +EDIL   + +I +R +D +LW+ +L++LV IG  I +F D+  
Sbjct: 536  VLATYAGEHTPVPRKSFEDILEVFILIIISRYEDPFLWKLSLKSLVLIGSCIARFKDSNM 595

Query: 1405 QLSYSKFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSD 1584
            Q+ Y++ VV R+  LL  D ++  L L LEAISEIG    D +S VI+GLEEA+ SSF  
Sbjct: 596  QMIYNEIVVRRLVRLLHKDSIL-PLDLILEAISEIGTCTLDLISPVIQGLEEAMLSSFLQ 654

Query: 1585 SYVNGNVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQ 1764
            + V+ +  +++ LV  L+CY  ++LPWCHT G  +Q  + F  NI   ME +    +  +
Sbjct: 655  ACVDESFKSSQDLVLFLDCYCTKILPWCHTSGSIEQPGMHFVINILEQMEDNIAFKMKPE 714

Query: 1765 RQGVLDATMMAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIP 1944
             Q +LD  MM MKLVV  C E +Q  ++ KAYNI+ ++                    IP
Sbjct: 715  MQDLLDKMMMTMKLVVRGCAENNQYIILEKAYNIMLASANLPSNALLVSSSILEGFQLIP 774

Query: 1945 DMSGLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINK 2124
            D   LSCK++ L+   AS+V AL  QTP+ +V  L+ L  +F LKGHLPAAQALAS+ NK
Sbjct: 775  DFCELSCKNKMLLYFLASIVTALHQQTPLTNVARLLNLLLVFTLKGHLPAAQALASVANK 834

Query: 2125 WPGNVSRAEQPSAYNLEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXXQIH 2304
                      P+A  LEETI ++L++ S++LS++   E  ++N ++D          QI+
Sbjct: 835  ---------LPNAVILEETIEMILDSFSSVLSNNHQNEPHMLN-SNDGASMHFCSNLQIN 884

Query: 2305 GVVG 2316
             V+G
Sbjct: 885  AVIG 888


>ref|XP_023921851.1| MMS19 nucleotide excision repair protein homolog isoform X1 [Quercus
            suber]
          Length = 1161

 Score =  620 bits (1599), Expect = 0.0
 Identities = 349/742 (47%), Positives = 487/742 (65%), Gaps = 9/742 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KS+ GV+T  +AK +AE++L N++ QSL   DRKLCFE+L+CLL+ YP  V  + DELI 
Sbjct: 127  KSSAGVITSTDAKAVAESFLQNLQVQSLGQHDRKLCFELLECLLERYPNTVTPMGDELIY 186

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSG--ASFSTELFEILSCYFPIYFTHQKN 354
            GI +A+D EKDP+CLMLTF+I E L+++FPD SG  ASF+ +LFEILSCYFPI+FTH + 
Sbjct: 187  GICEAVDSEKDPQCLMLTFHIVEVLVQLFPDTSGPFASFAGDLFEILSCYFPIHFTHPRG 246

Query: 355  DDFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGA 534
            +D  IKRDDLS+ALM AF STP FEP AI             AK+DSLKYLS+C  +YG 
Sbjct: 247  EDLGIKRDDLSQALMLAFSSTPLFEPFAIPLLLEKLSSSLPSAKLDSLKYLSSCTSNYGP 306

Query: 535  VRMFKHANAIWSALKDAVFNLSPQGTMFASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
             RM KHA AIW ++KDA++    + T+ +  S+S + +  QE++IAKEAL  L   I Q 
Sbjct: 307  ERMAKHARAIWLSIKDALYTSLQEPTL-SFTSESLDGLVFQENEIAKEALTLLQQVIMQ- 364

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
               N+  F+SLI++D+DI     +V    SY+ I  + + +L + G ILSI+TKTS  CC
Sbjct: 365  ---NNGLFLSLIVEDEDINIILNTVPTYESYNDIPLQGKLKLFAAGCILSISTKTSVACC 421

Query: 895  SIVFQKFFPRLMNVLGVSMSDSS--HSCIKECKTFSNILNFGALYLCVELLASCRDLTMV 1068
            +++F+ FFPRLM +LG+S  + S  HS  K+    S  LNFGALYL VELLA+CRDL   
Sbjct: 422  NMIFESFFPRLMEILGLSEKNLSGDHSP-KDNYLISKRLNFGALYLSVELLAACRDLIAG 480

Query: 1069 AQDL---SPQVPDSWWYLLKDFSGPVTFALKSALVNTGTAATGPEHMSCVVKGLQVLTTF 1239
            +  +   S    ++ + +L  FS  VT A  S LV +    T    +   VKGLQ+L TF
Sbjct: 481  STQIACKSVSTYETSYCMLHSFSNLVTKAFCSTLVTS----THDADIYFGVKGLQILATF 536

Query: 1240 PGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKKQLSYS 1419
            PG +SPV    +E+IL   MS+IT     T LWR  L+AL+ IG  I++ ++++K LSY 
Sbjct: 537  PGDVSPVPISEFENILITFMSIITVNFKKTLLWRLALKALMNIGSFIDRNNESEKILSYM 596

Query: 1420 KFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSDSYVNG 1599
              VVE+I SL+SLDDV     LKLEAIS IG +G ++M  +I+G EEA+F++ S+ YV+G
Sbjct: 597  PIVVEKIVSLVSLDDVTMPFPLKLEAISGIGTSGLNYMLHIIQGFEEALFANLSEIYVHG 656

Query: 1600 NVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQRQGVL 1779
            N+ +A+I + LLECYSN++LPW H  G  +++ L+F  NIW  +E   + SV    + +L
Sbjct: 657  NLKSAKITIWLLECYSNKLLPWIHDNGVFEEVLLRFPINIWKQIESCVDFSV--PEKELL 714

Query: 1780 DATMMAMKLVVGYCTEESQSTLVRKAYNIL-SSTTFPQXXXXXXXXXXXXXXXXIPD-MS 1953
            DA M AMK  V +C+EESQ+ +++KAYN+L SST+FP                 +   M 
Sbjct: 715  DAMMTAMKHAVAFCSEESQNEIIQKAYNVLSSSTSFPLKESMALTIPFQLEGLQLTQKMD 774

Query: 1954 GLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINKWPG 2133
             L C++EW++SLFAS+VIA+RPQT IP+V  ++ LF   LLKGH+PAAQAL S++NK+  
Sbjct: 775  NLLCRNEWILSLFASVVIAVRPQTHIPNVKVILNLFITTLLKGHVPAAQALGSIVNKFGK 834

Query: 2134 NVSRAEQPSAYNLEETINVVLE 2199
            + + +E  S   LEE ++++ +
Sbjct: 835  SSTGSEISSDCTLEEALDIIFQ 856


>ref|XP_020676941.1| MMS19 nucleotide excision repair protein homolog isoform X1
            [Dendrobium catenatum]
 ref|XP_020676942.1| MMS19 nucleotide excision repair protein homolog isoform X1
            [Dendrobium catenatum]
 gb|PKU69866.1| hypothetical protein MA16_Dca011884 [Dendrobium catenatum]
          Length = 1150

 Score =  620 bits (1598), Expect = 0.0
 Identities = 345/784 (44%), Positives = 488/784 (62%), Gaps = 12/784 (1%)
 Frame = +1

Query: 1    KSNVGVVTGGEAKMLAENYLANVRAQSLAMRDRKLCFEVLQCLLDIYPEAVMTLDDELIS 180
            KSNVG++   +A+ LA++ L NV+ Q LAM DRKLCFEV QCLLD + +++ +L D+ + 
Sbjct: 116  KSNVGMLADNDARTLAQSMLDNVQVQLLAMHDRKLCFEVFQCLLDAHSDSIASLGDDFVY 175

Query: 181  GILDAIDGEKDPRCLMLTFYIAEALMRIFPDQSGASF-STELFEILSCYFPIYFTHQKND 357
            G++ A+D EKDPRCL+LTF++ ++L+++F  Q G+   + +LFE+LSCYFP+YFTH+  D
Sbjct: 176  GLIQAVDQEKDPRCLVLTFHLVQSLVKLFLSQLGSEHVAQDLFEVLSCYFPVYFTHKIAD 235

Query: 358  DFEIKRDDLSRALMNAFCSTPYFEPVAIXXXXXXXXXXXXXAKIDSLKYLSNCMLHYGAV 537
            DFE+KR+DLS ALM+AFCSTPYFEP AI             AKIDSLKYL+ C+L++G  
Sbjct: 236  DFEVKREDLSDALMDAFCSTPYFEPFAIPLLLDKLSSSLPLAKIDSLKYLNKCLLNFGTE 295

Query: 538  RMFKHANAIWSALKDAVFNLSPQGTMF-ASVSKSTEDVESQESQIAKEALNCLHMAISQL 714
            RM +HA  IW ALKD + N  PQ  +  +SVS    D++  E +IA EAL CL   I Q 
Sbjct: 296  RMLQHAQNIWFALKDVILNHLPQAEILSSSVSVLGGDIKYHEHKIATEALICLKTTILQF 355

Query: 715  NCTNSEPFISLILDDQDIERNFVSVCLERSYSGISKESQRQLSSLGSILSIATKTSTDCC 894
             C N+  F++LI+DD  +ER+F SV +E SYS    ++  +LS+LGSILS+   +S   C
Sbjct: 356  TCPNNVDFLTLIIDDNVVERSFCSVTMEGSYSDNDDKNDLKLSALGSILSVVANSSIFGC 415

Query: 895  SIVFQKFFPRLMNVLGVSMSDSSHSCIKECKTFSNILNFGALYLCVELLASCRDL---TM 1065
            + VFQ FFPRLM  LG+ +  S HS     +  S   N+GALYL VELLAS RDL    +
Sbjct: 416  NRVFQDFFPRLMVALGIDLRTSKHSADAYVEIVSQKFNYGALYLSVELLASSRDLIATVL 475

Query: 1066 VAQDLSPQVPDSWWYLLKDFSGPVTFALKSALV--NTGTAATG-----PEHMSCVVKGLQ 1224
             + +    +   WW+L+++FSGP+T A KSAL+  N  TA  G      E + C VKGL+
Sbjct: 476  ESSNSKDSLRGIWWHLIQEFSGPLTSAFKSALMIPNKITAEGGNSNYMQEIIICSVKGLE 535

Query: 1225 VLTTFPGHISPVSEDIYEDILAALMSVITARSDDTYLWRTTLEALVQIGLHIEKFSDAKK 1404
            VL T+ G  +PV    +EDIL   + +I +R +D +LW+ +L++LV IG  I +F D+  
Sbjct: 536  VLATYAGEHTPVPRKSFEDILEVFILIIISRYEDPFLWKLSLKSLVLIGSCIARFKDSNM 595

Query: 1405 QLSYSKFVVERIASLLSLDDVITSLALKLEAISEIGFAGPDFMSAVIRGLEEAIFSSFSD 1584
            Q+ Y++ VV R+  LL  D ++  L L LEAISEIG    D +S VI+GLEEA+ SSF  
Sbjct: 596  QMIYNEIVVRRLVRLLHKDSIL-PLDLILEAISEIGTCTLDLISPVIQGLEEAMLSSFLQ 654

Query: 1585 SYVNGNVGAAEILVPLLECYSNRVLPWCHTFGKTDQIALQFASNIWNLMEKSTNLSVDLQ 1764
            + V+ +  +++ LV  L+CY  ++LPWCHT G  +Q  + F  NI   ME +    +  +
Sbjct: 655  ACVDESFKSSQDLVLFLDCYCTKILPWCHTSGSIEQPGMHFVINILEQMEDNIAFKMKPE 714

Query: 1765 RQGVLDATMMAMKLVVGYCTEESQSTLVRKAYNILSSTTFPQXXXXXXXXXXXXXXXXIP 1944
             Q +LD  MM MKLVV  C E +Q  ++ KAYNI+ ++                    IP
Sbjct: 715  MQDLLDKMMMTMKLVVRGCAENNQYIILEKAYNIMLASANLPSNALLVSSSILEGFQLIP 774

Query: 1945 DMSGLSCKDEWLISLFASLVIALRPQTPIPDVVALIRLFTIFLLKGHLPAAQALASMINK 2124
            D   LSCK++ L+   AS+V AL  QTP+ +V  L+ L  +F LKGHLPAAQALAS+ NK
Sbjct: 775  DFCELSCKNKMLLYFLASIVTALHQQTPLTNVARLLNLLLVFTLKGHLPAAQALASVANK 834

Query: 2125 WPGNVSRAEQPSAYNLEETINVVLENLSAILSSSPLKECKIVNDTDDXXXXXXXXXXQIH 2304
                      P+A  LEETI ++L++ S++LS++   E  ++N ++D          QI+
Sbjct: 835  ---------LPNAVILEETIEMILDSFSSVLSNNHQNEPHMLN-SNDGASMHFCSNLQIN 884

Query: 2305 GVVG 2316
             V+G
Sbjct: 885  AVIG 888