BLASTX nr result
ID: Ophiopogon27_contig00004304
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00004304
(1341 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020250110.1| regulator of nonsense transcripts UPF3-like ... 533 0.0
ref|XP_020250111.1| regulator of nonsense transcripts UPF3-like ... 484 e-164
gb|ONK55320.1| uncharacterized protein A4U43_UnF4970 [Asparagus ... 484 e-163
ref|XP_020250112.1| regulator of nonsense transcripts UPF3-like ... 466 e-158
ref|XP_010246760.1| PREDICTED: regulator of nonsense transcripts... 390 e-127
ref|XP_008786472.1| PREDICTED: regulator of nonsense transcripts... 387 e-126
ref|XP_010930556.1| PREDICTED: regulator of nonsense transcripts... 387 e-126
ref|XP_008786471.1| PREDICTED: regulator of nonsense transcripts... 387 e-126
ref|XP_010246761.1| PREDICTED: regulator of nonsense transcripts... 382 e-124
ref|XP_006858584.1| regulator of nonsense transcripts UPF3 isofo... 378 e-122
ref|XP_010912655.1| PREDICTED: regulator of nonsense transcripts... 376 e-122
gb|PIA44204.1| hypothetical protein AQUCO_01700072v1 [Aquilegia ... 376 e-122
gb|PIA44203.1| hypothetical protein AQUCO_01700072v1 [Aquilegia ... 375 e-122
ref|XP_010246762.1| PREDICTED: regulator of nonsense transcripts... 376 e-122
ref|XP_011628613.1| regulator of nonsense transcripts UPF3 isofo... 376 e-122
gb|OMO92296.1| Regulator of nonsense-mediated decay, UPF3 [Corch... 369 e-120
ref|XP_021286730.1| regulator of nonsense transcripts UPF3 isofo... 370 e-120
ref|XP_008795266.1| PREDICTED: regulator of nonsense transcripts... 370 e-120
gb|OMO75152.1| Regulator of nonsense-mediated decay, UPF3 [Corch... 367 e-119
ref|XP_015579220.1| PREDICTED: regulator of nonsense transcripts... 366 e-119
>ref|XP_020250110.1| regulator of nonsense transcripts UPF3-like [Asparagus officinalis]
gb|ONK55322.1| uncharacterized protein A4U43_UnF5010 [Asparagus officinalis]
Length = 554
Score = 533 bits (1374), Expect = 0.0
Identities = 294/459 (64%), Positives = 338/459 (73%), Gaps = 13/459 (2%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RFSGRYNWF+FRPGK+SQ NQ +SRAYI+F SP DVVDFA+FF+GH+FVNEKG+QF ALV
Sbjct: 31 RFSGRYNWFSFRPGKYSQKNQRFSRAYIDFQSPEDVVDFAEFFDGHVFVNEKGTQFKALV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VPKV SKKDGREGTI+KDPEY+EFLEFI+KPVENLPSAEIQLERREAER+GGP
Sbjct: 91 EYAPSQHVPKVLSKKDGREGTIFKDPEYVEFLEFISKPVENLPSAEIQLERREAERAGGP 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
KE+VI TPLMDFIRQKRA KSGSQRSS++GKL LTSM
Sbjct: 151 KESVITTPLMDFIRQKRAIKSGSQRSSSSGKLSRRAGGALSSSSISSKRGAEKRRGLTSM 210
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQASRTEVSEEGTIIGSNGTTPIVSGSVEIGKRR 722
Y+LRD+ KT+S+ KDKA Y LVSRKE QA R EVSEE + SN +TPIVSGSVEIGKRR
Sbjct: 211 YVLRDNGKTNSNVKDKAGYTLVSRKEGQACRREVSEEA--MDSNESTPIVSGSVEIGKRR 268
Query: 723 VVLLKGKEREAFHV-XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSILSNKDVR 899
VVLLKGKEREA HV VRNL GS SSKQSQRQEA GRI+RSILSNK
Sbjct: 269 VVLLKGKEREASHVSGSSSQQQSATALVRNLNGSISSKQSQRQEASGRIIRSILSNKGTH 328
Query: 900 QSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHI--SATHSAVSDVDGKRSVDD 1073
QS+S+ G Q E QTQA+NS+R+K L KDH+ SA + DVDGKR +DD
Sbjct: 329 QSRSY-VGSQSEQQTQAVNSEREKRPPRPPNPRLNFKDHVIGSAKQLSSPDVDGKRMIDD 387
Query: 1074 KAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRRSDGVHTGDVISLSAQQ----SEG- 1238
K+A+S+LHGSVS DKN++R+RN+DRPDRGVWTPR SDGVH + S SAQQ EG
Sbjct: 388 KSAMSNLHGSVSIVDKNDRRVRNKDRPDRGVWTPRHSDGVHVNNDNSFSAQQLSDALEGI 447
Query: 1239 -----GQKDRDDDIGFQSAHGGGGSNPMAAYDAPLSRRE 1340
G K+RD+D+ Q+A SN MAAYD ++ E
Sbjct: 448 SQQTLGHKNRDEDMDIQTAQRACVSNSMAAYDDSMTHGE 486
>ref|XP_020250111.1| regulator of nonsense transcripts UPF3-like isoform X1 [Asparagus
officinalis]
Length = 553
Score = 484 bits (1246), Expect = e-164
Identities = 275/452 (60%), Positives = 311/452 (68%), Gaps = 6/452 (1%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
+FSGRYNWF FRPGK SQ NQ +SRAYI+F +P DVVDFA+FF+GHIFVNEKGSQF ALV
Sbjct: 31 KFSGRYNWFVFRPGKQSQKNQRFSRAYIDFQNPEDVVDFAEFFDGHIFVNEKGSQFKALV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VP + KKDGREGTI KDPEY+EFLEFIAKPVENLPSAEIQLERRE ER+GGP
Sbjct: 91 EYAPSQRVPMLLPKKDGREGTISKDPEYVEFLEFIAKPVENLPSAEIQLERRETERAGGP 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
KEAVIVTPLMDFIRQKR AK+GSQR S NGKL TS+
Sbjct: 151 KEAVIVTPLMDFIRQKRLAKTGSQRLSVNGKLSRRAGGSVISSSGSSKRGSEKRRGSTSV 210
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQ----ASRTEVSEEGTIIGSNGTTPIVSGSVEI 710
Y+ RD AK SSSGK K+ Y+L+ RK+ Q SR EV EEGT+ G NGT P+ SGSVEI
Sbjct: 211 YVPRDKAKASSSGKVKSTYVLMLRKDEQQLGSGSRKEVLEEGTVAGLNGTMPVASGSVEI 270
Query: 711 GKRRVVLLKGKEREAFHV-XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSILSN 887
G RR VLLKGKEREA HV V NL S+SSKQ QR EA GR +R IL N
Sbjct: 271 GNRR-VLLKGKEREASHVSDGYSQQQNTTASVGNLTASSSSKQIQRHEASGRNIRRILLN 329
Query: 888 KDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHIS-ATHSAVSDVDGKRS 1064
K R SQS+SAG Q E QTQ ++SQ+DK L KDHIS A S++ DGK S
Sbjct: 330 KVSRHSQSYSAGAQHEQQTQDVSSQKDK-RPPRPPNRLGQKDHISIAAQSSIPYNDGKGS 388
Query: 1065 VDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRRSDGVHTGDVISLSAQQSEGGQ 1244
DDK V++L+GS S GDKNEKRMRN+DRPDRGVWTP R+DGV+T + LSA Q
Sbjct: 389 TDDKVVVNNLNGS-SIGDKNEKRMRNKDRPDRGVWTPHRADGVNTNGSVYLSAPQLS--- 444
Query: 1245 KDRDDDIGFQSAHGGGGSNPMAAYDAPLSRRE 1340
+ G +H G+N AAYDAPLS E
Sbjct: 445 ---ESSDGIYMSHEECGTNSRAAYDAPLSHEE 473
>gb|ONK55320.1| uncharacterized protein A4U43_UnF4970 [Asparagus officinalis]
Length = 620
Score = 484 bits (1246), Expect = e-163
Identities = 275/452 (60%), Positives = 311/452 (68%), Gaps = 6/452 (1%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
+FSGRYNWF FRPGK SQ NQ +SRAYI+F +P DVVDFA+FF+GHIFVNEKGSQF ALV
Sbjct: 31 KFSGRYNWFVFRPGKQSQKNQRFSRAYIDFQNPEDVVDFAEFFDGHIFVNEKGSQFKALV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VP + KKDGREGTI KDPEY+EFLEFIAKPVENLPSAEIQLERRE ER+GGP
Sbjct: 91 EYAPSQRVPMLLPKKDGREGTISKDPEYVEFLEFIAKPVENLPSAEIQLERRETERAGGP 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
KEAVIVTPLMDFIRQKR AK+GSQR S NGKL TS+
Sbjct: 151 KEAVIVTPLMDFIRQKRLAKTGSQRLSVNGKLSRRAGGSVISSSGSSKRGSEKRRGSTSV 210
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQ----ASRTEVSEEGTIIGSNGTTPIVSGSVEI 710
Y+ RD AK SSSGK K+ Y+L+ RK+ Q SR EV EEGT+ G NGT P+ SGSVEI
Sbjct: 211 YVPRDKAKASSSGKVKSTYVLMLRKDEQQLGSGSRKEVLEEGTVAGLNGTMPVASGSVEI 270
Query: 711 GKRRVVLLKGKEREAFHV-XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSILSN 887
G RR VLLKGKEREA HV V NL S+SSKQ QR EA GR +R IL N
Sbjct: 271 GNRR-VLLKGKEREASHVSDGYSQQQNTTASVGNLTASSSSKQIQRHEASGRNIRRILLN 329
Query: 888 KDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHIS-ATHSAVSDVDGKRS 1064
K R SQS+SAG Q E QTQ ++SQ+DK L KDHIS A S++ DGK S
Sbjct: 330 KVSRHSQSYSAGAQHEQQTQDVSSQKDK-RPPRPPNRLGQKDHISIAAQSSIPYNDGKGS 388
Query: 1065 VDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRRSDGVHTGDVISLSAQQSEGGQ 1244
DDK V++L+GS S GDKNEKRMRN+DRPDRGVWTP R+DGV+T + LSA Q
Sbjct: 389 TDDKVVVNNLNGS-SIGDKNEKRMRNKDRPDRGVWTPHRADGVNTNGSVYLSAPQLS--- 444
Query: 1245 KDRDDDIGFQSAHGGGGSNPMAAYDAPLSRRE 1340
+ G +H G+N AAYDAPLS E
Sbjct: 445 ---ESSDGIYMSHEECGTNSRAAYDAPLSHEE 473
>ref|XP_020250112.1| regulator of nonsense transcripts UPF3-like isoform X2 [Asparagus
officinalis]
Length = 527
Score = 466 bits (1200), Expect = e-158
Identities = 266/451 (58%), Positives = 302/451 (66%), Gaps = 5/451 (1%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
+FSGRYNWF FRPGK SQ NQ +SRAYI+F +P DVVDFA+FF+GHIFVNEKGSQF ALV
Sbjct: 31 KFSGRYNWFVFRPGKQSQKNQRFSRAYIDFQNPEDVVDFAEFFDGHIFVNEKGSQFKALV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VP + KKDGREGTI KDPEY+EFLEFIAKPVENLPSAEIQLERRE ER+GGP
Sbjct: 91 EYAPSQRVPMLLPKKDGREGTISKDPEYVEFLEFIAKPVENLPSAEIQLERRETERAGGP 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
KEAVIVTPLMDFIRQKR AK+GSQR S NGKL TS+
Sbjct: 151 KEAVIVTPLMDFIRQKRLAKTGSQRLSVNGKLSRRAGGSVISSSGSSKRGSEKRRGSTSV 210
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQ----ASRTEVSEEGTIIGSNGTTPIVSGSVEI 710
Y+ RD AK SSSGK K+ Y+L+ RK+ Q SR EV EEGT+ G NGT P+ SGSVEI
Sbjct: 211 YVPRDKAKASSSGKVKSTYVLMLRKDEQQLGSGSRKEVLEEGTVAGLNGTMPVASGSVEI 270
Query: 711 GKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSILSNK 890
G RR VLLKGKEREA H+ QR EA GR +R IL NK
Sbjct: 271 GNRR-VLLKGKEREASHI-------------------------QRHEASGRNIRRILLNK 304
Query: 891 DVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHIS-ATHSAVSDVDGKRSV 1067
R SQS+SAG Q E QTQ ++SQ+DK L KDHIS A S++ DGK S
Sbjct: 305 VSRHSQSYSAGAQHEQQTQDVSSQKDK-RPPRPPNRLGQKDHISIAAQSSIPYNDGKGST 363
Query: 1068 DDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRRSDGVHTGDVISLSAQQSEGGQK 1247
DDK V++L+GS S GDKNEKRMRN+DRPDRGVWTP R+DGV+T + LSA Q
Sbjct: 364 DDKVVVNNLNGS-SIGDKNEKRMRNKDRPDRGVWTPHRADGVNTNGSVYLSAPQLS---- 418
Query: 1248 DRDDDIGFQSAHGGGGSNPMAAYDAPLSRRE 1340
+ G +H G+N AAYDAPLS E
Sbjct: 419 --ESSDGIYMSHEECGTNSRAAYDAPLSHEE 447
>ref|XP_010246760.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Nelumbo
nucifera]
Length = 612
Score = 390 bits (1003), Expect = e-127
Identities = 222/425 (52%), Positives = 279/425 (65%), Gaps = 18/425 (4%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RF+GRY W FR GK+SQ +Q YSRAYI+F P DV++FA+FF+GHIFVNEKGSQF +V
Sbjct: 31 RFAGRYKWICFRSGKNSQKHQRYSRAYIDFKRPEDVIEFAEFFDGHIFVNEKGSQFKTIV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ V K SKKDGREGTI+KDPEYLEFL+ I+KPVENLPSAE+QLERREAER+G
Sbjct: 91 EYAPSQRVAKSWSKKDGREGTIFKDPEYLEFLDLISKPVENLPSAEVQLERREAERAGAA 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXLT 536
KE IVTPLMDF+RQKRAAK GSQRS +NGKL T
Sbjct: 151 KEVPIVTPLMDFVRQKRAAKGGSQRSLSNGKLSRRATGTSPGSSGSSSTKRGSEKRRVST 210
Query: 537 SMYILRDSAKTSSSGKDKAAYMLVSRKERQ-----------ASRTEVSEEGTIIGSNGTT 683
SMY+LRDS K ++SGKDK+ Y+LV R+E Q AS TE +E+ + ++G
Sbjct: 211 SMYVLRDSVK-NTSGKDKSTYILVPRREDQELTDKSVSLVIASGTETAEDEKVPKTDGAI 269
Query: 684 PIVSGSVEIGKRRVVLLKGKEREAFHV--XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAG 857
+GS + GK++V+LLKGKERE + +RN ST+ KQSQR++
Sbjct: 270 STATGSADTGKKKVLLLKGKEREIPNAPEVGVSQQQSVISPIRNSPNSTAFKQSQRRDVS 329
Query: 858 GRIVRSILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHSA 1037
GR++RSILS K+ RQ QS +A +Q + Q+Q +N +++K +LKDH+S+ A
Sbjct: 330 GRMIRSILS-KEARQGQSTTA-IQSDQQSQTMNLEKEKRPPRPTTMRSVLKDHLSSISQA 387
Query: 1038 VS--DVDGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTP-RRSDGVHTGDV 1208
S D + KR DDK AV+ +HG S +K EKR RN+DRPDRGVWTP RRSD H D
Sbjct: 388 ASSCDTEMKRIQDDKVAVNDVHGVSSVNEKQEKRARNKDRPDRGVWTPLRRSDISHASDD 447
Query: 1209 ISLSA 1223
S S+
Sbjct: 448 SSSSS 452
>ref|XP_008786472.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Phoenix dactylifera]
Length = 574
Score = 387 bits (995), Expect = e-126
Identities = 232/476 (48%), Positives = 290/476 (60%), Gaps = 30/476 (6%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RF+GRY+W FRPGK S NQ YSRAY+NF DVV+FA+ F+GHIFVNEKG+QF ALV
Sbjct: 31 RFAGRYDWACFRPGKASHKNQRYSRAYLNFKRLEDVVEFAELFDGHIFVNEKGAQFKALV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VPK KKDGREGTI KDPEYLEFLE ++KP E+LPSAEIQLER+EAER+G P
Sbjct: 91 EYAPSQRVPKPWPKKDGREGTISKDPEYLEFLELLSKP-EHLPSAEIQLERKEAERAGAP 149
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
KE IVTPLMDF+RQKRAAKSG QR NGKL TSM
Sbjct: 150 KETPIVTPLMDFVRQKRAAKSGIQRLPGNGKLSKRAGGVSKRGSDKRRLS-------TSM 202
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQ-----------ASRTEVSEEGTIIGSNGTTPI 689
Y+LRD+ K + KDK Y+LVSR+E Q +S TE E+ + GS+G+T
Sbjct: 203 YVLRDNTK-NGGAKDKPTYILVSRREDQQLPDKPISVASSSGTEALEDEFVSGSSGST-- 259
Query: 690 VSGSVEIGKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIV 869
S VE GK +++LLKGK RE H +R+ ST SKQS+R E+ GRI+
Sbjct: 260 -SFPVEAGKSKIMLLKGKGREGSHASGGLVQQQNLTSLRSSPTST-SKQSRRLESSGRII 317
Query: 870 RSILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATH--SAVS 1043
R ILS K+ RQ+QS++ QPE Q Q N ++DK I +DH+S++ +VS
Sbjct: 318 RGILS-KEARQTQSYTVSSQPEQQMQTANVEKDKRPPRPPSARSIPRDHVSSSSPLPSVS 376
Query: 1044 DVDGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRR-------SDGVHTG 1202
D D KR +DDK A HGSVS DK+++R RN+DRPDRGVW P R +DG H+
Sbjct: 377 DGDDKRYIDDKVAAGYKHGSVSISDKHDRRTRNKDRPDRGVWAPLRRSDRSQSNDGTHSS 436
Query: 1203 ----------DVISLSAQQSEGGQKDRDDDIGFQSAHGGGGSNPMAAYDAPLSRRE 1340
+ +S Q G + DD + Q+AH G GS+ +A + L + E
Sbjct: 437 SPEPALILADSLEDVSISQQAAGIRLADDGVVVQNAHVGRGSSSLADHGMQLGQGE 492
>ref|XP_010930556.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Elaeis
guineensis]
Length = 575
Score = 387 bits (995), Expect = e-126
Identities = 232/476 (48%), Positives = 287/476 (60%), Gaps = 30/476 (6%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RF+GRY+W FRPGK S NQ YSRAY+NF DVV+FA+ F+GHIFVNEKG+QF ALV
Sbjct: 31 RFAGRYDWACFRPGKASHKNQRYSRAYLNFKRLEDVVEFAELFDGHIFVNEKGAQFKALV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VP+ SKKDGREGTI KDPEYLEFLE ++KP E+LPSAEIQLER+EAER+G P
Sbjct: 91 EYAPSQRVPRAWSKKDGREGTISKDPEYLEFLELLSKP-EHLPSAEIQLERKEAERAGAP 149
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
KE IVTPLMDF+RQKRAAKSG QR NGKL TSM
Sbjct: 150 KETPIVTPLMDFVRQKRAAKSGIQRLPGNGKLSKRAGGVSKRGSDKRRSS-------TSM 202
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQ-----------ASRTEVSEEGTIIGSNGTTPI 689
Y+LRDS K + KDK+ Y+L SR+E Q AS E E+ + GS+G+
Sbjct: 203 YVLRDSTK-NGGAKDKSTYILGSRREDQQLPDKPIAVASASGAEALEDEFVSGSSGSN-- 259
Query: 690 VSGSVEIGKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIV 869
+G VE GK ++VLLKGK +E H + +SKQS+R E+GGRI+
Sbjct: 260 -AGPVEAGKSKIVLLKGKGKEGSHASGGLVHQQNVTSPVRSSPTLTSKQSRRLESGGRII 318
Query: 870 RSILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATH--SAVS 1043
RSILS K+ RQ+QS+ A PE Q Q N ++DK I +DH+S+ +VS
Sbjct: 319 RSILS-KEARQTQSYIASSLPEQQMQTANMEKDKRPPRPPSTRSISRDHVSSGSPLPSVS 377
Query: 1044 DVDGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRR-------SDGVHT- 1199
D D KR +DDK V HGSVS DK+++R RN+DRPDRGVW P R +DG H+
Sbjct: 378 DGDDKRYIDDKVGVGYKHGSVSISDKHDRRTRNKDRPDRGVWAPLRRSDRSQSNDGTHSL 437
Query: 1200 ---------GDVISLSAQQSEGGQKDRDDDIGFQSAHGGGGSNPMAAYDAPLSRRE 1340
+ +S Q G K DD + Q+A GGGS+ +A PL + E
Sbjct: 438 SSEPALILADSLEDISISQQAAGIKVADDGVVVQNALIGGGSSSLADRGMPLGQGE 493
>ref|XP_008786471.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Phoenix dactylifera]
Length = 581
Score = 387 bits (995), Expect = e-126
Identities = 232/476 (48%), Positives = 290/476 (60%), Gaps = 30/476 (6%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RF+GRY+W FRPGK S NQ YSRAY+NF DVV+FA+ F+GHIFVNEKG+QF ALV
Sbjct: 31 RFAGRYDWACFRPGKASHKNQRYSRAYLNFKRLEDVVEFAELFDGHIFVNEKGAQFKALV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VPK KKDGREGTI KDPEYLEFLE ++KP E+LPSAEIQLER+EAER+G P
Sbjct: 91 EYAPSQRVPKPWPKKDGREGTISKDPEYLEFLELLSKP-EHLPSAEIQLERKEAERAGAP 149
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
KE IVTPLMDF+RQKRAAKSG QR NGKL TSM
Sbjct: 150 KETPIVTPLMDFVRQKRAAKSGIQRLPGNGKLSKRAGGVSKRGSDKRRLS-------TSM 202
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQ-----------ASRTEVSEEGTIIGSNGTTPI 689
Y+LRD+ K + KDK Y+LVSR+E Q +S TE E+ + GS+G+T
Sbjct: 203 YVLRDNTK-NGGAKDKPTYILVSRREDQQLPDKPISVASSSGTEALEDEFVSGSSGST-- 259
Query: 690 VSGSVEIGKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIV 869
S VE GK +++LLKGK RE H +R+ ST SKQS+R E+ GRI+
Sbjct: 260 -SFPVEAGKSKIMLLKGKGREGSHASGGLVQQQNLTSLRSSPTST-SKQSRRLESSGRII 317
Query: 870 RSILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATH--SAVS 1043
R ILS K+ RQ+QS++ QPE Q Q N ++DK I +DH+S++ +VS
Sbjct: 318 RGILS-KEARQTQSYTVSSQPEQQMQTANVEKDKRPPRPPSARSIPRDHVSSSSPLPSVS 376
Query: 1044 DVDGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRR-------SDGVHTG 1202
D D KR +DDK A HGSVS DK+++R RN+DRPDRGVW P R +DG H+
Sbjct: 377 DGDDKRYIDDKVAAGYKHGSVSISDKHDRRTRNKDRPDRGVWAPLRRSDRSQSNDGTHSS 436
Query: 1203 ----------DVISLSAQQSEGGQKDRDDDIGFQSAHGGGGSNPMAAYDAPLSRRE 1340
+ +S Q G + DD + Q+AH G GS+ +A + L + E
Sbjct: 437 SPEPALILADSLEDVSISQQAAGIRLADDGVVVQNAHVGRGSSSLADHGMQLGQGE 492
>ref|XP_010246761.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Nelumbo
nucifera]
Length = 602
Score = 382 bits (981), Expect = e-124
Identities = 219/419 (52%), Positives = 280/419 (66%), Gaps = 12/419 (2%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RF+GRY W FR GK+SQ +Q YSRAYI+F P DV++FA+FF+GHIFVNEKGSQF +V
Sbjct: 31 RFAGRYKWICFRSGKNSQKHQRYSRAYIDFKRPEDVIEFAEFFDGHIFVNEKGSQFKTIV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ V K SKKDGREGTI+KDPEYLEFL+ I+KPVENLPSAE+QLERREAER+G
Sbjct: 91 EYAPSQRVAKSWSKKDGREGTIFKDPEYLEFLDLISKPVENLPSAEVQLERREAERAGAA 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXLT 536
KE IVTPLMDF+RQKRAAK GSQRS +NGKL T
Sbjct: 151 KEVPIVTPLMDFVRQKRAAKGGSQRSLSNGKLSRRATGTSPGSSGSSSTKRGSEKRRVST 210
Query: 537 SMYILRDSAKTSSSGKDKAAYMLVSRKERQASRTEVSEEG-TIIGSNGTTPI----VSGS 701
SMY+LRDS K ++SGKDK+ Y+LV R+E Q E++++ +++ ++GT +GS
Sbjct: 211 SMYVLRDSVK-NTSGKDKSTYILVPRREDQ----ELTDKSVSLVIASGTETAEDEKATGS 265
Query: 702 VEIGKRRVVLLKGKEREAFHV--XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRS 875
+ GK++V+LLKGKERE + +RN ST+ KQSQR++ GR++RS
Sbjct: 266 ADTGKKKVLLLKGKEREIPNAPEVGVSQQQSVISPIRNSPNSTAFKQSQRRDVSGRMIRS 325
Query: 876 ILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHSAVS--DV 1049
ILS K+ RQ QS +A +Q + Q+Q +N +++K +LKDH+S+ A S D
Sbjct: 326 ILS-KEARQGQSTTA-IQSDQQSQTMNLEKEKRPPRPTTMRSVLKDHLSSISQAASSCDT 383
Query: 1050 DGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTP-RRSDGVHTGDVISLSA 1223
+ KR DDK AV+ +HG S +K EKR RN+DRPDRGVWTP RRSD H D S S+
Sbjct: 384 EMKRIQDDKVAVNDVHGVSSVNEKQEKRARNKDRPDRGVWTPLRRSDISHASDDSSSSS 442
>ref|XP_006858584.1| regulator of nonsense transcripts UPF3 isoform X2 [Amborella
trichopoda]
gb|ERN20051.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
Length = 599
Score = 378 bits (971), Expect = e-122
Identities = 222/451 (49%), Positives = 281/451 (62%), Gaps = 18/451 (3%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RFSGRY W AFRPGK+S NQ +SR YI+F P DV++FA+FF GH+FVNEKGSQF A+V
Sbjct: 31 RFSGRYEWAAFRPGKNSLKNQRHSRIYIDFKRPEDVLEFAEFFVGHVFVNEKGSQFKAVV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VPK SKKDGREGTI+KDPEYLEFLEF+AKP ENLPSAEIQLERREAER+G
Sbjct: 91 EYAPSQRVPKPWSKKDGREGTIFKDPEYLEFLEFLAKPAENLPSAEIQLERREAERAGAS 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXLT 536
KE++IVTPLMDF+RQKRAAKSG+ RSSANGK T
Sbjct: 151 KESLIVTPLMDFVRQKRAAKSGTLRSSANGKTSRRSTGVSSTSPGSNSQKRGPERRKIST 210
Query: 537 SMYILRDSAKTSSSGKDKAAYMLVSRKERQASRTEVSEEGTIIG-----------SNGTT 683
SMY+LRDS K +SS KDK+ Y LV R++ Q S + G ++ T
Sbjct: 211 SMYVLRDSTKGTSS-KDKSTYGLVPRRDEQKLPDNSSAVSALAGPEALDDESVGVADVTA 269
Query: 684 PIVSGSVEIGKRRVVLLKGKEREAFHV-XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGG 860
V G++E GK++V+LLKGK+REA +RNL GS +QSQR++
Sbjct: 270 ATVGGTLESGKKKVLLLKGKDREASQASGSVVQQQTVSSPIRNLSGSAPFRQSQRRDGNS 329
Query: 861 RIVRSILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISA--THS 1034
R+V+SILSNKD RQ + Q E Q Q ++ ++DK L KDH+S +
Sbjct: 330 RMVKSILSNKDGRQVPAHVL-TQTEQQLQGLSLEKDKRPPRPNSTRLASKDHLSGYLMPT 388
Query: 1035 AVSDVDGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTP-RRSDGVHTGDVI 1211
++SD D K+++D K + +G V +K EKR RN+DRPDR VWTP RRSDG+HT D
Sbjct: 389 SMSDSDPKKALDQKITGNDSYGLVPANEKQEKRTRNKDRPDRAVWTPLRRSDGIHTVDES 448
Query: 1212 SLSAQQSEGGQKDRDDDIGFQSAHGGG-GSN 1301
+++ E ++ +G + G GSN
Sbjct: 449 QMTSDSLEKLSNAQELKLGDDTEECDGLGSN 479
>ref|XP_010912655.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Elaeis
guineensis]
ref|XP_019704254.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Elaeis
guineensis]
Length = 562
Score = 376 bits (966), Expect = e-122
Identities = 228/457 (49%), Positives = 279/457 (61%), Gaps = 30/457 (6%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RF+GRY+W FRPGK S NQ YSR+Y++F P DVV+FA+FF+GHIFVNEKG+QF LV
Sbjct: 31 RFAGRYDWVCFRPGKASPKNQRYSRSYLSFKRPEDVVEFAEFFDGHIFVNEKGAQFKVLV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VPK SSKKDGREGTI KDPEYLEFLE ++KP E+LPSAEIQLER+EAER+G
Sbjct: 91 EYAPSQHVPKPSSKKDGREGTISKDPEYLEFLEHLSKP-EHLPSAEIQLERKEAERAGAQ 149
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
KE IVTPLMDF+RQKRAAK+G+QR + NGKL TSM
Sbjct: 150 KEMPIVTPLMDFVRQKRAAKNGAQRLAGNGKLSKRAMGVMKRGSEKRRLS-------TSM 202
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQ-----------ASRTEVSEEGTIIGSNGTTPI 689
Y+LRD K SS KDK Y+LV R+E Q AS E E+ SNG +
Sbjct: 203 YVLRDGRKNGSS-KDKPTYILVPRREEQQLPDKSFAVASASGAEALEDEFGTVSNG---L 258
Query: 690 VSGSVEIGKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIV 869
+SGSVE K ++VLLKGKERE H +++SKQ+QR EAGGRI+
Sbjct: 259 ISGSVEARKSKIVLLKGKEREGSHASGGFVQLQNVTTTARSSPTSTSKQNQRLEAGGRII 318
Query: 870 RSILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHS--AVS 1043
RSILSN +VRQS S+ QPE Q N ++DK I KDH+ + S ++S
Sbjct: 319 RSILSN-EVRQSNMASS--QPEQHMQTTNLEKDKRPPRPPSTRSISKDHVCGSSSPVSIS 375
Query: 1044 DVDGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPR-RSDGVHTGD----- 1205
D D KR +DD A+S GSVS DK+EKR RN+DRPD GVW P RSD + D
Sbjct: 376 DGDDKRYIDDMVAMSYKQGSVSIVDKHEKRTRNKDRPDWGVWAPLCRSDRSQSNDGTFSS 435
Query: 1206 -----------VISLSAQQSEGGQKDRDDDIGFQSAH 1283
+ ++S Q G K DD++ ++AH
Sbjct: 436 SSEAAQILVDSIENVSISQQAAGNKVADDNVVVRNAH 472
>gb|PIA44204.1| hypothetical protein AQUCO_01700072v1 [Aquilegia coerulea]
Length = 551
Score = 376 bits (965), Expect = e-122
Identities = 216/416 (51%), Positives = 274/416 (65%), Gaps = 6/416 (1%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RF+GRY WF+FRPGK+SQ +Q Y+RAYI+F P DVV+FA+FF+GH+FVNEKG+Q A+V
Sbjct: 31 RFAGRYKWFSFRPGKYSQKHQKYARAYIDFRRPEDVVEFAEFFDGHVFVNEKGTQVKAIV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EY+PSQ VPK KKDGREGTIYKDPEY+EFLEF+AKPVENLPSAEIQLE+REAER+G
Sbjct: 91 EYSPSQRVPKSWCKKDGREGTIYKDPEYMEFLEFLAKPVENLPSAEIQLEKREAERAGAG 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXLT 536
KE +IVTPLMDF+RQKRAAKSG+QRSS+NGKL T
Sbjct: 151 KEPLIVTPLMDFVRQKRAAKSGTQRSSSNGKLSRRAIGASPGNSRPTSLKRGSEKRRSST 210
Query: 537 SMYILRDSAKTSSSGKDKAAYMLVSRKERQASRTEVS---EEGT-IIGSNGTTPIVSGSV 704
SMY++RDS K S+S KDK Y+LV R+E +S +S E G II SG+V
Sbjct: 211 SMYVMRDSTK-SASVKDK-TYILVQRREDPSSDKPISANTESGAEIIADETVISGASGTV 268
Query: 705 EIGKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSILS 884
+ K++++LLKGKER+ H VRN GS +SK +QR+E GG+++RSILS
Sbjct: 269 DFAKKKILLLKGKERDITH-SYAGSSQQSATSVRNSTGSPASKHTQRREVGGKMIRSILS 327
Query: 885 NKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHSAVSDVDGKRS 1064
NK+ RQSQ+ S VQ E Q Q ++ +++K ILKDH+ + + SD D KR+
Sbjct: 328 NKEARQSQA-SMAVQSEQQNQTMHVEKEKRPPRATNMRSILKDHLISNAACSSDSDVKRT 386
Query: 1065 VDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRRSDGVHTGDVISLSAQQS 1232
D S HG S +K E+ +NRDRPDR VW+ R S G H D +LS +S
Sbjct: 387 GD--VIGSDPHGPGSINEKQERSTKNRDRPDRNVWSHRGSAGSHGSDE-TLSVSES 439
>gb|PIA44203.1| hypothetical protein AQUCO_01700072v1 [Aquilegia coerulea]
gb|PIA44205.1| hypothetical protein AQUCO_01700072v1 [Aquilegia coerulea]
Length = 548
Score = 375 bits (964), Expect = e-122
Identities = 216/415 (52%), Positives = 276/415 (66%), Gaps = 5/415 (1%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RF+GRY WF+FRPGK+SQ +Q Y+RAYI+F P DVV+FA+FF+GH+FVNEKG+Q A+V
Sbjct: 31 RFAGRYKWFSFRPGKYSQKHQKYARAYIDFRRPEDVVEFAEFFDGHVFVNEKGTQVKAIV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EY+PSQ VPK KKDGREGTIYKDPEY+EFLEF+AKPVENLPSAEIQLE+REAER+G
Sbjct: 91 EYSPSQRVPKSWCKKDGREGTIYKDPEYMEFLEFLAKPVENLPSAEIQLEKREAERAGAG 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXLT 536
KE +IVTPLMDF+RQKRAAKSG+QRSS+NGKL T
Sbjct: 151 KEPLIVTPLMDFVRQKRAAKSGTQRSSSNGKLSRRAIGASPGNSRPTSLKRGSEKRRSST 210
Query: 537 SMYILRDSAKTSSSGKDKAAYMLVSRKERQASRTEVS---EEGTIIGSNGTTPIVSGSVE 707
SMY++RDS K S+S KDK Y+LV R+E +S +S E G I ++ T SG+V+
Sbjct: 211 SMYVMRDSTK-SASVKDK-TYILVQRREDPSSDKPISANTESGAEIIADETG--ASGTVD 266
Query: 708 IGKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSILSN 887
K++++LLKGKER+ H VRN GS +SK +QR+E GG+++RSILSN
Sbjct: 267 FAKKKILLLKGKERDITH-SYAGSSQQSATSVRNSTGSPASKHTQRREVGGKMIRSILSN 325
Query: 888 KDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHSAVSDVDGKRSV 1067
K+ RQSQ+ S VQ E Q Q ++ +++K ILKDH+ + + SD D KR+
Sbjct: 326 KEARQSQA-SMAVQSEQQNQTMHVEKEKRPPRATNMRSILKDHLISNAACSSDSDVKRTG 384
Query: 1068 DDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRRSDGVHTGDVISLSAQQS 1232
D S HG S +K E+ +NRDRPDR VW+ R S G H D +LS +S
Sbjct: 385 D--VIGSDPHGPGSINEKQERSTKNRDRPDRNVWSHRGSAGSHGSDE-TLSVSES 436
>ref|XP_010246762.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Nelumbo
nucifera]
Length = 585
Score = 376 bits (966), Expect = e-122
Identities = 216/423 (51%), Positives = 270/423 (63%), Gaps = 16/423 (3%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RF+GRY W FR GK+SQ +Q YSRAYI+F P DV++FA+FF+GHIFVNEKGSQF +V
Sbjct: 31 RFAGRYKWICFRSGKNSQKHQRYSRAYIDFKRPEDVIEFAEFFDGHIFVNEKGSQFKTIV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ V K SKKDGREGTI+KDPEYLEFL+ I+KPVENLPSAE+QLERREAER+G
Sbjct: 91 EYAPSQRVAKSWSKKDGREGTIFKDPEYLEFLDLISKPVENLPSAEVQLERREAERAGAA 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXLT 536
KE IVTPLMDF+RQKRAAK GSQRS +NGKL T
Sbjct: 151 KEVPIVTPLMDFVRQKRAAKGGSQRSLSNGKLSRRATGTSPGSSGSSSTKRGSEKRRVST 210
Query: 537 SMYILRDSAKTSSSGKDKAAYMLVSRKERQ-----------ASRTEVSEEGTIIGSNGTT 683
SMY+LRDS K ++SGKDK+ Y+LV R+E Q AS TE +E+ + ++G
Sbjct: 211 SMYVLRDSVK-NTSGKDKSTYILVPRREDQELTDKSVSLVIASGTETAEDEKVPKTDGAI 269
Query: 684 PIVSGSVEIGKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGR 863
+GS + GK++V+LLKGKERE SQR++ GR
Sbjct: 270 STATGSADTGKKKVLLLKGKEREI-------------------------PNSQRRDVSGR 304
Query: 864 IVRSILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHSAVS 1043
++RSILS K+ RQ QS +A +Q + Q+Q +N +++K +LKDH+S+ A S
Sbjct: 305 MIRSILS-KEARQGQSTTA-IQSDQQSQTMNLEKEKRPPRPTTMRSVLKDHLSSISQAAS 362
Query: 1044 --DVDGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTP-RRSDGVHTGDVIS 1214
D + KR DDK AV+ +HG S +K EKR RN+DRPDRGVWTP RRSD H D S
Sbjct: 363 SCDTEMKRIQDDKVAVNDVHGVSSVNEKQEKRARNKDRPDRGVWTPLRRSDISHASDDSS 422
Query: 1215 LSA 1223
S+
Sbjct: 423 SSS 425
>ref|XP_011628613.1| regulator of nonsense transcripts UPF3 isoform X1 [Amborella
trichopoda]
Length = 600
Score = 376 bits (966), Expect = e-122
Identities = 223/452 (49%), Positives = 282/452 (62%), Gaps = 19/452 (4%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RFSGRY W AFRPGK+S NQ +SR YI+F P DV++FA+FF GH+FVNEKGSQF A+V
Sbjct: 31 RFSGRYEWAAFRPGKNSLKNQRHSRIYIDFKRPEDVLEFAEFFVGHVFVNEKGSQFKAVV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VPK SKKDGREGTI+KDPEYLEFLEF+AKP ENLPSAEIQLERREAER+G
Sbjct: 91 EYAPSQRVPKPWSKKDGREGTIFKDPEYLEFLEFLAKPAENLPSAEIQLERREAERAGAS 150
Query: 363 KEAVIVTPLMDFIRQKRAAKSGS-QRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXL 533
KE++IVTPLMDF+RQKRAAKSG+ QRSSANGK
Sbjct: 151 KESLIVTPLMDFVRQKRAAKSGTLQRSSANGKTSRRSTGVSSTSPGSNSQKRGPERRKIS 210
Query: 534 TSMYILRDSAKTSSSGKDKAAYMLVSRKERQASRTEVSEEGTIIG-----------SNGT 680
TSMY+LRDS K +SS KDK+ Y LV R++ Q S + G ++ T
Sbjct: 211 TSMYVLRDSTKGTSS-KDKSTYGLVPRRDEQKLPDNSSAVSALAGPEALDDESVGVADVT 269
Query: 681 TPIVSGSVEIGKRRVVLLKGKEREAFHV-XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAG 857
V G++E GK++V+LLKGK+REA +RNL GS +QSQR++
Sbjct: 270 AATVGGTLESGKKKVLLLKGKDREASQASGSVVQQQTVSSPIRNLSGSAPFRQSQRRDGN 329
Query: 858 GRIVRSILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISA--TH 1031
R+V+SILSNKD RQ + Q E Q Q ++ ++DK L KDH+S
Sbjct: 330 SRMVKSILSNKDGRQVPAHVL-TQTEQQLQGLSLEKDKRPPRPNSTRLASKDHLSGYLMP 388
Query: 1032 SAVSDVDGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTP-RRSDGVHTGDV 1208
+++SD D K+++D K + +G V +K EKR RN+DRPDR VWTP RRSDG+HT D
Sbjct: 389 TSMSDSDPKKALDQKITGNDSYGLVPANEKQEKRTRNKDRPDRAVWTPLRRSDGIHTVDE 448
Query: 1209 ISLSAQQSEGGQKDRDDDIGFQSAHGGG-GSN 1301
+++ E ++ +G + G GSN
Sbjct: 449 SQMTSDSLEKLSNAQELKLGDDTEECDGLGSN 480
>gb|OMO92296.1| Regulator of nonsense-mediated decay, UPF3 [Corchorus olitorius]
Length = 493
Score = 369 bits (948), Expect = e-120
Identities = 225/441 (51%), Positives = 279/441 (63%), Gaps = 9/441 (2%)
Frame = +3
Query: 6 FSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALVE 185
F+GRYNW +FRPGK++Q +Q SRAYI+F DV++FA+FFNGH+FVNEKG QF +VE
Sbjct: 32 FAGRYNWLSFRPGKNNQKHQSCSRAYIDFKRSEDVLEFAEFFNGHVFVNEKGIQFKTIVE 91
Query: 186 YAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGPK 365
YAPSQ VPK SKKDGREGTI KDPEYLEFLEF+AKPVENLPSAEIQLER+EAER+G PK
Sbjct: 92 YAPSQRVPKQWSKKDGREGTIGKDPEYLEFLEFLAKPVENLPSAEIQLERKEAERAGVPK 151
Query: 366 EAVIVTPLMDFIRQKRAAKSGSQRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXLTS 539
+A IVTPLMDF+RQKRAAK GS+RS +NGKL T+
Sbjct: 152 DAPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSGISPSSGSSKRGSEKRRGSTT 211
Query: 540 MYILRDSAKTSSSGKDKAAYMLVSRKERQASR-----TEVSEEGTIIGSNGTTPIVSGSV 704
MY+LRDS K ++SGKDK+AY+LVSRK+ Q TEVSEE +G VSG
Sbjct: 212 MYVLRDSLK-NASGKDKSAYILVSRKDEQQLSDKPVGTEVSEE-----QSG----VSGIT 261
Query: 705 EIGKRRVVLLKGKEREAFHV-XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSIL 881
+ GK++V+LLKGKE++ HV ++N++ ST +KQ+ R+E GR++R IL
Sbjct: 262 DAGKKKVLLLKGKEKDISHVAGSMLHQQNVTSPIKNILSSTPTKQNFRRE--GRMIRGIL 319
Query: 882 SNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHSAVSDVDGKR 1061
NKD RQSQ +GVQ E Q QA N ++D+ +L+D A+
Sbjct: 320 LNKDARQSQ--LSGVQSEQQIQASNLEKDRRPPRHSHAQFVLRDANGAS----------- 366
Query: 1062 SVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRRSDGVHTGDVISLSAQQSEGG 1241
DDK + HG +K E+R RN+DRPDRGVWT RRSDG H D SLS+ S+
Sbjct: 367 --DDKGGGNDFHGI----EKLERRGRNKDRPDRGVWTLRRSDGSHASDE-SLSSASSQSA 419
Query: 1242 QKDRDDDIG-FQSAHGGGGSN 1301
Q D G Q GGG N
Sbjct: 420 QIPLDSSEGSVQVKSVGGGRN 440
>ref|XP_021286730.1| regulator of nonsense transcripts UPF3 isoform X2 [Herrania
umbratica]
Length = 514
Score = 370 bits (949), Expect = e-120
Identities = 222/454 (48%), Positives = 286/454 (62%), Gaps = 22/454 (4%)
Frame = +3
Query: 6 FSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALVE 185
F+GRYNW +FRPGK SQ +Q YSRAYI+F DV++FA+FFNGH+FVNEKG+QF +VE
Sbjct: 32 FAGRYNWLSFRPGKSSQKHQSYSRAYIDFKRSEDVLEFAEFFNGHVFVNEKGTQFKTIVE 91
Query: 186 YAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGPK 365
YAPSQ VPK+SSKKDGREGTI KDPEYL+FL +AKPVENLPSAEIQLER+EAER+G PK
Sbjct: 92 YAPSQRVPKLSSKKDGREGTILKDPEYLDFLGCLAKPVENLPSAEIQLERKEAERAGVPK 151
Query: 366 EAVIVTPLMDFIRQKRAAKSGSQRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXLTS 539
+ IVTPLMDF+RQKRAAK GS+RS +NGKL T+
Sbjct: 152 DTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSGGTPGSASLKRGSEKRRGSTA 211
Query: 540 MYILRDSAKTSSSGKDKAAYMLVSRKERQASRTEVSEEGTIIGSNGTTPI------VSGS 701
MY+LRDS K ++SGKDK+ Y+LVS+++ Q ++S++ + S+ T I V G
Sbjct: 212 MYVLRDSLK-NASGKDKSTYILVSKRDEQ----QLSDKHVTLASSMGTEISEEESGVPGI 266
Query: 702 VEIGKRRVVLLKGKEREAFHV-XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSI 878
+ GK++V+LLKGKE+E HV ++N++GST +KQ+ R+E GR++R I
Sbjct: 267 TDAGKKKVLLLKGKEKEISHVAGTMLYQQNVTSPIKNILGSTPTKQNSRRE--GRMIRGI 324
Query: 879 LSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHSAVSDVDGK 1058
L NKD RQ+Q S+GVQ + Q Q N ++D+ L+LKD +A+
Sbjct: 325 LLNKDARQNQ--SSGVQSDQQIQTSNLEKDRRPPRHSHSHLVLKDTNTAS---------- 372
Query: 1059 RSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRRSDGVHTGD-VISLSAQQS- 1232
DDK + LHGS +K E+R RN+DRPDRGVWT RRSDG + D +S SA QS
Sbjct: 373 ---DDKVVGNDLHGS----EKPERRSRNKDRPDRGVWTLRRSDGSYASDESMSSSASQSP 425
Query: 1233 -------EGGQKDRDDDI----GFQSAHGGGGSN 1301
EG D D+ Q GG G N
Sbjct: 426 QIPLDSLEGAYGDVKVDLSNVRSVQVKTGGSGRN 459
>ref|XP_008795266.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Phoenix dactylifera]
Length = 562
Score = 370 bits (951), Expect = e-120
Identities = 224/457 (49%), Positives = 276/457 (60%), Gaps = 30/457 (6%)
Frame = +3
Query: 3 RFSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALV 182
RFSGRY+W FRPGK S NQ YSRAY+NF P VV+FA+FF+GHIFVNEKG+QF LV
Sbjct: 31 RFSGRYDWLCFRPGKASHKNQRYSRAYLNFKRPEVVVEFAEFFDGHIFVNEKGAQFKVLV 90
Query: 183 EYAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGP 362
EYAPSQ VPK SSKKDGREGTI KDPEYLEFLE ++KP E+LPSAEIQLER+EAER+G
Sbjct: 91 EYAPSQHVPKPSSKKDGREGTISKDPEYLEFLEHLSKP-EHLPSAEIQLERKEAERAGAQ 149
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
KE IVTPLM+F+RQK AAK+G+QR + GKL TSM
Sbjct: 150 KETPIVTPLMNFVRQKLAAKNGAQRLAGYGKLSKRAIGVIKRGSEKRRLS-------TSM 202
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQ-----------ASRTEVSEEGTIIGSNGTTPI 689
Y+LRDS K + S KDKA Y+L+ R+E Q AS E E+ + SNG T
Sbjct: 203 YVLRDSRK-NGSAKDKATYILMPRREEQQLPDKSIAVASASGAEALEDEFVTVSNGLT-- 259
Query: 690 VSGSVEIGKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIV 869
S +VE GK ++VLLKGKERE H +++SKQ+QR EA GRI+
Sbjct: 260 -SRAVEAGKSKIVLLKGKEREGSHASGGLVQQQNVTTTVRSSPTSTSKQNQRLEASGRII 318
Query: 870 RSILSNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHS--AVS 1043
R+ILSN+ QS+ A QPE N ++DK I KD +S++ S ++S
Sbjct: 319 RTILSNEG---RQSYMASSQPEQHMHTTNLEKDKRPARPPSARSISKDRVSSSSSPASIS 375
Query: 1044 DVDGKRSVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTP-RRSDGVHTGD----- 1205
D KR +DD A+S HGSVS DK+EKR RN+DRPDRGVW P RRSD + D
Sbjct: 376 DNGDKRYIDDMVAMSYKHGSVSISDKHEKRTRNKDRPDRGVWAPLRRSDRSQSNDGTLSS 435
Query: 1206 -----------VISLSAQQSEGGQKDRDDDIGFQSAH 1283
+ ++S Q G K DD++ +AH
Sbjct: 436 SSEAAQILVDSLENVSMSQQTAGIKVADDNVVVWNAH 472
>gb|OMO75152.1| Regulator of nonsense-mediated decay, UPF3 [Corchorus capsularis]
Length = 500
Score = 367 bits (941), Expect = e-119
Identities = 222/438 (50%), Positives = 277/438 (63%), Gaps = 8/438 (1%)
Frame = +3
Query: 6 FSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALVE 185
F+GRYNW +FRPGK++Q +Q SRAYI+F DV++FA+FFNGH+FVNEKG QF +VE
Sbjct: 32 FAGRYNWLSFRPGKNNQKHQSCSRAYIDFKRSEDVLEFAEFFNGHVFVNEKGIQFKTIVE 91
Query: 186 YAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAERSGGPK 365
YAPSQ VPK SKKDGREGTI KDPEYLEFLEF+AKPVENLPSAEIQLER+EAER+G PK
Sbjct: 92 YAPSQRVPKQWSKKDGREGTIGKDPEYLEFLEFLAKPVENLPSAEIQLERKEAERAGVPK 151
Query: 366 EAVIVTPLMDFIRQKRAAKSGSQRSSANGKL--XXXXXXXXXXXXXXXXXXXXXXXXLTS 539
+ IVTPLMDF+RQKRAAK GS+RS +NGKL T+
Sbjct: 152 DTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAGGSSGISPSSGSSKRGSEKRRGSTT 211
Query: 540 MYILRDSAKTSSSGKDKAAYMLVSRKERQASR-----TEVSEEGTIIGSNGTTPIVSGSV 704
MY+LRDS K ++SGKDK+AY+LVSRK+ Q TE+SEE +G VSG
Sbjct: 212 MYVLRDSLK-NASGKDKSAYILVSRKDEQQLSDKPVGTEISEE-----QSG----VSGIT 261
Query: 705 EIGKRRVVLLKGKEREAFHV-XXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSIL 881
+ GK++V+LLKGKE++ HV ++N++ ST +KQ+ RQE GR++R IL
Sbjct: 262 DAGKKKVLLLKGKEKDISHVAGSMLHQQNVTSPIKNILSSTPTKQNFRQE--GRMIRGIL 319
Query: 882 SNKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHSAVSDVDGKR 1061
NKD RQSQ +GVQ E Q QA N ++D+ +L+D A+
Sbjct: 320 LNKDARQSQ--LSGVQSEQQIQASNLEKDRRPPRHSHAQFVLRDANGAS----------- 366
Query: 1062 SVDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTPRRSDGVHTGDVISLSAQQSEGG 1241
DDK + HG +K E+R RN+DRPDRGVWT RRSDG H D SLS+ S+
Sbjct: 367 --DDKGGGNDFHGI----EKLERRGRNKDRPDRGVWTLRRSDGSHASDE-SLSSASSQSA 419
Query: 1242 QKDRDDDIGFQSAHGGGG 1295
Q I S+ GG G
Sbjct: 420 Q------IPLDSSEGGYG 431
>ref|XP_015579220.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Ricinus
communis]
Length = 494
Score = 366 bits (940), Expect = e-119
Identities = 220/438 (50%), Positives = 278/438 (63%), Gaps = 8/438 (1%)
Frame = +3
Query: 6 FSGRYNWFAFRPGKHSQMNQHYSRAYINFVSPIDVVDFADFFNGHIFVNEKGSQFMALVE 185
FSGRYNW +FRPGK SQ +Q YSRAYI+F P DV++FA+FFNGH+FVNEKG+QF A+VE
Sbjct: 38 FSGRYNWVSFRPGKSSQKHQSYSRAYIDFKRPEDVIEFAEFFNGHLFVNEKGTQFRAIVE 97
Query: 186 YAPSQIVPKVSSKKDGREGTIYKDPEYLEFLEFIAKPVENLPSAEIQLERREAER-SGGP 362
YAPSQ VPK SKKDGREGTI KDP YLEFLE I+KP ENLPSAEIQLERREAER +
Sbjct: 98 YAPSQHVPKQWSKKDGREGTIVKDPAYLEFLELISKPAENLPSAEIQLERREAERAASAA 157
Query: 363 KEAVIVTPLMDFIRQKRAAKSGSQRSSANGKLXXXXXXXXXXXXXXXXXXXXXXXXLTSM 542
K+A IVTPLMDF+RQKRAAK+GS+R +NGK+ +M
Sbjct: 158 KDAPIVTPLMDFVRQKRAAKTGSRRILSNGKISRRSGASGSPSSSSSKRSSEKKRVSATM 217
Query: 543 YILRDSAKTSSSGKDKAAYMLVSRKERQASRTEVSEEGTIIGSNGTTPI------VSGSV 704
Y+LRDSAK S+SGKDK+ Y+LV +++ Q + S++ T S T + VSG
Sbjct: 218 YVLRDSAK-STSGKDKSTYLLVPKRDDQ----QFSDKSTPFASASGTEVLEDESGVSGIT 272
Query: 705 EIGKRRVVLLKGKEREAFHVXXXXXXXXXXXXVRNLVGSTSSKQSQRQEAGGRIVRSILS 884
+ GK++++LLKGKE+E + +N V S++ KQSQR+E+ GRI+RSIL
Sbjct: 273 DTGKKKILLLKGKEKEISALSGGMSKQNAASFDKN-VTSSAIKQSQRRESSGRIIRSILL 331
Query: 885 NKDVRQSQSFSAGVQPEMQTQAINSQRDKXXXXXXXXXLILKDHISATHSAVSDVDGKRS 1064
NKD RQ+Q S+G Q E Q Q+ N +++K L+LK DV+G S
Sbjct: 332 NKDSRQNQ--SSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLK-----------DVNG--S 376
Query: 1065 VDDKAAVSSLHGSVSTGDKNEKRMRNRDRPDRGVWTP-RRSDGVHTGDVISLSAQQSEGG 1241
DDK + LHG +G+K EKR RN+DRPDR VWTP RRSDG + D SLS+ S+
Sbjct: 377 SDDKFVGNDLHG--FSGEKQEKRTRNKDRPDRVVWTPLRRSDGSYASDE-SLSSSASQST 433
Query: 1242 QKDRDDDIGFQSAHGGGG 1295
+D G G G
Sbjct: 434 HTGQDSSQGSHKHFGRRG 451