BLASTX nr result
ID: Ophiopogon27_contig00004297
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00004297
(2678 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018810895.1| PREDICTED: uncharacterized protein LOC108983... 273 e-179
ref|XP_020114420.1| uncharacterized protein LOC109728433 [Ananas... 188 e-163
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 175 e-154
ref|XP_020703187.1| uncharacterized protein LOC110114598 [Dendro... 185 e-149
gb|PKU86468.1| RNA-directed DNA polymerase [Dendrobium catenatum] 185 e-149
gb|PKU64035.1| RNA-directed DNA polymerase [Dendrobium catenatum] 182 e-145
gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum] 192 e-144
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 181 e-142
ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprot... 184 e-142
ref|XP_022847564.1| uncharacterized protein LOC111370094 [Olea e... 242 e-141
ref|XP_018501913.1| PREDICTED: uncharacterized protein LOC108866... 172 e-139
gb|OTG20186.1| putative reverse transcriptase domain-containing ... 169 e-136
ref|XP_016727823.1| PREDICTED: uncharacterized protein LOC107939... 177 e-136
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 180 e-136
gb|OTG11107.1| putative reverse transcriptase domain-containing ... 169 e-136
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 175 e-135
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 175 e-133
gb|PKU61488.1| RNA-directed DNA polymerase [Dendrobium catenatum] 182 e-133
gb|OTG11106.1| putative reverse transcriptase domain-containing ... 166 e-133
gb|KYP78758.1| Transposon Ty3-I Gag-Pol polyprotein, partial [Ca... 170 e-133
>ref|XP_018810895.1| PREDICTED: uncharacterized protein LOC108983648 [Juglans regia]
Length = 1496
Score = 273 bits (698), Expect(6) = e-179
Identities = 166/385 (43%), Positives = 229/385 (59%), Gaps = 21/385 (5%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQ-CNF--VL 1299
V+YSDH+AL Y+ SQK+LN++ WVE+LQ Y+F L+H+ V+N+AADAL++ +F ++
Sbjct: 964 VLYSDHEALRYLNSQKRLNSRHGRWVEYLQAYSFALKHRKGVENQAADALSRRISFLSIM 1023
Query: 1300 NKKTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
N K GFE + E YESC DF + + L+ G + DG+ L DG++F KLCI TS+ +
Sbjct: 1024 NVKVIGFERLKEEYESCLDFRDTFLALQSGQSDTTDGFRLEDGYIFKTNKLCIPRTSVRD 1083
Query: 1477 FLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGLY 1653
F+VWE+HAGGL GHFG + TI +E + WP LKRDVAK + C+ CQLAK ++ NTGLY
Sbjct: 1084 FIVWEVHAGGLAGHFGRDKTIEEIERQFYWPSLKRDVAKIVSTCNTCQLAKQKRQNTGLY 1143
Query: 1654 TPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFLLM-----PLKLPRFS 1818
TPLPVP P QD++MDFVLG P+T +K+DS VVD FSKM HF+ K+ R
Sbjct: 1144 TPLPVPSCPSQDVSMDFVLGLPRTLKKYDSIFVVVDRFSKMAHFIPCSKTSDAYKIARLY 1203
Query: 1819 LTML*SCMVCPSRLCS----------IEMLNSLVISRRYFGTRWVPNLN-FLPLSTHKLM 1965
+ P + S + L +V ++ F T + P + + H L
Sbjct: 1204 FNEIVKLYGLPKTIVSDRDVRFTSHFLRTLWHMVGTKLKFSTAYHPQTDGQTEVVNHSL- 1262
Query: 1966 DRRML*IEVFEICCELLWANILGLGS*IIYN*ICI**SVNRTTGKSPYEIVFGYRPRQLI 2145
+L V E W IL I YN SVNR+ G S +E+V GY+PR+ +
Sbjct: 1263 -GNLLRCLVQENLRN--WDLILPTAQ-IAYN-----SSVNRSIGMSAFEVVHGYKPRKPL 1313
Query: 2146 DLIPVSDHYKTSESALSFAPHIHEL 2220
DLIP+S H S SA +F H+H+L
Sbjct: 1314 DLIPMSPHAHVSVSAEAFVQHLHDL 1338
Score = 159 bits (402), Expect(6) = e-179
Identities = 82/118 (69%), Positives = 93/118 (78%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF DVF DL + LPPLRD+QH IDLV G SLPNL HYRMNPTEHAEL+RQV ELL KGF
Sbjct: 603 EFRDVFPKDLPDHLPPLRDIQHAIDLVPGASLPNLPHYRMNPTEHAELQRQVGELLHKGF 662
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
+RES+SPC VPALL+ KK+G RMC+D +I VKYRF IPRL+DMLDM+ GA F
Sbjct: 663 IRESLSPCAVPALLTPKKDGSWRMCIDSRAINRITVKYRFLIPRLDDMLDMMIGATIF 720
Score = 110 bits (275), Expect(6) = e-179
Identities = 60/95 (63%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
Frame = +3
Query: 849 KFVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDI-GVLSQEGHPVAYFN 1025
+F W+ EATKAF +KKRM EA VM L DFSKVF+V CDA + I GVLSQE HPVAYF+
Sbjct: 868 EFQWTSEATKAFKLVKKRMTEAPVMRLPDFSKVFEVECDASGVGIGGVLSQERHPVAYFS 927
Query: 1026 EKLNDARLRYEMYDNEF*TMIQSL-YG*HYLLP*E 1127
EKLNDA+ RY YD E ++Q+L Y HYLLP E
Sbjct: 928 EKLNDAKQRYSTYDKELYAVVQALSYWRHYLLPQE 962
Score = 83.2 bits (204), Expect(6) = e-179
Identities = 40/58 (68%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCF-DIFIYIQSREQHLDHL 587
K+ LYEW+VM FGLTN PSTFM VM Q L PF+GKFLVV F DI +Y +++EQHLDHL
Sbjct: 747 KDGLYEWLVMPFGLTNAPSTFMRVMTQALRPFMGKFLVVYFDDILVYSRTKEQHLDHL 804
Score = 67.4 bits (163), Expect(6) = e-179
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = +1
Query: 700 DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD*LK 846
DP KI+AI W EPK I DVR F+GLATFY RFIKGF TI+A IT+ +K
Sbjct: 817 DPTKIQAIVGWPEPKTIHDVRSFYGLATFYRRFIKGFSTIMAPITECMK 865
Score = 53.1 bits (126), Expect(6) = e-179
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK 420
+FSKIDLKSG HQI IR GDEWKT FKTK
Sbjct: 719 IFSKIDLKSGYHQIRIRQGDEWKTTFKTK 747
>ref|XP_020114420.1| uncharacterized protein LOC109728433 [Ananas comosus]
Length = 1069
Score = 188 bits (478), Expect(8) = e-163
Identities = 100/228 (43%), Positives = 141/228 (61%), Gaps = 5/228 (2%)
Frame = +1
Query: 1120 RKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNFVL 1299
R+ ++ SDH+AL Y+ SQK LN + + W FLQ+YTF LRHK + N+ ADAL++ N +L
Sbjct: 722 REFILNSDHEALRYLNSQKNLNKRHAKWSAFLQEYTFHLRHKQGIANRVADALSRRNHLL 781
Query: 1300 ---NKKTAGFE*I-NEYESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TS 1467
+ + GFE + ++Y++ P+F I + Y L G+LF KLCI S
Sbjct: 782 ITSSLQIVGFEIVKDQYQNDPNFGPILKKCLSPDNDSPSDYCLDGGYLFRKSKLCIPQGS 841
Query: 1468 LHEFLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNT 1644
L E L+ LH+ GL GHFG + T+ V+ Y WP + +DV +++ +C CQ K + NT
Sbjct: 842 LRESLIQNLHSSGLGGHFGRDKTLGLVQERYYWPNMSKDVERFVQRCKTCQSFKGQTQNT 901
Query: 1645 GLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
LYTPLP+P P +DI+MDFVLG PK R+ DS VVD F+KM HF+
Sbjct: 902 SLYTPLPIPTVPWEDISMDFVLGLPKIARQVDSVFVVVDRFTKMAHFI 949
Score = 147 bits (372), Expect(8) = e-163
Identities = 74/118 (62%), Positives = 91/118 (77%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF+D+ ++L + LPP+RD+QH ID V G SLP+L HYRM+P EH EL RQV ELL+KG+
Sbjct: 336 EFSDIMPEELPDGLPPMRDIQHCIDFVPGASLPHLAHYRMSPAEHEELYRQVFELLQKGY 395
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
+RESMSP VPALL+ KK+G RMCVD KI +KYRFPIPR++DMLDML GA F
Sbjct: 396 IRESMSPVAVPALLTPKKDGTWRMCVDSRAVNKITIKYRFPIPRIDDMLDMLGGAKIF 453
Score = 90.1 bits (222), Expect(8) = e-163
Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = +3
Query: 849 KFVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFN 1025
KF W+ EA K+F +K ++ +A V+ L DF KVF++ CDA I IG VLSQE P+A+F+
Sbjct: 629 KFTWTSEAEKSFQLVKDKLTKAPVLALPDFEKVFEIDCDASHIGIGGVLSQEKRPIAFFS 688
Query: 1026 EKLNDARLRYEMYDNEF*TMIQSL 1097
EKLNDAR RY YD EF ++Q+L
Sbjct: 689 EKLNDARARYSTYDLEFYAIVQAL 712
Score = 86.3 bits (212), Expect(8) = e-163
Identities = 42/78 (53%), Positives = 57/78 (73%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DAS +AK+FF+++V+LHG+ KSI D D KF S+F + L K G+KL FS+ +H TDGQ
Sbjct: 956 DASHIAKLFFNEIVRLHGIPKSITSDRDTKFVSHFWRTLMSKAGSKLNFSSPYHRQTDGQ 1015
Query: 1971 TDVMN*SL*NLLRAPMGE 2024
T+++N SL NLLR GE
Sbjct: 1016 TEIVNRSLSNLLRCLAGE 1033
Score = 80.5 bits (197), Expect(8) = e-163
Identities = 45/80 (56%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCF-DIFIYIQSREQHLDHL*T 593
K LYEW+VM FGL+N PSTFM M QVL PFIGKF+VV F DI IY S E H+DHL
Sbjct: 480 KEGLYEWLVMPFGLSNAPSTFMRSMNQVLRPFIGKFVVVYFDDILIYSTSPETHMDHLRQ 539
Query: 594 VFAVLRKS--YM*IQKVYFL 647
V LR + ++ ++K FL
Sbjct: 540 VLQTLRDNSLHLNLKKCTFL 559
Score = 66.2 bits (160), Expect(8) = e-163
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 631 KKCTFFTTQXXXXXXXXXXXXXX-DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKG 807
KKCTF T DP KI AI W PK I ++R FHGLA+FY RFI+
Sbjct: 554 KKCTFLTDSLTFLGYVVSTEGIKVDPVKIEAIQNWPTPKTITEIRSFHGLASFYRRFIRN 613
Query: 808 FCTIVASITD*LK 846
F +++A ITD LK
Sbjct: 614 FSSLIAPITDCLK 626
Score = 52.8 bits (125), Expect(8) = e-163
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK 420
+FSKIDLKSG HQI IR GDEWKT FKTK
Sbjct: 452 IFSKIDLKSGYHQIRIRPGDEWKTAFKTK 480
Score = 22.7 bits (47), Expect(8) = e-163
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 2036 WDLKLSIIEFAYNNLLIGQQVRVLMK*FSVI 2128
WDL L EFAYN+ + + +K + +
Sbjct: 1038 WDLILPQAEFAYNSSITEPLENLFLKLYMAV 1068
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 175 bits (443), Expect(9) = e-154
Identities = 95/231 (41%), Positives = 146/231 (63%), Gaps = 5/231 (2%)
Frame = +1
Query: 1111 IYCRKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCN 1290
++ ++ VI+SDH++L +I SQ KLN + + WVEF++ + + ++HK +N ADAL++
Sbjct: 1115 LWPKEFVIHSDHESLKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKENVIADALSRRY 1174
Query: 1291 FVLNK---KTAGFE*I-NEYESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL 1458
+L++ K G E I ++Y +F ++ K+G R + ++L+DGF+F KLCI
Sbjct: 1175 TMLSQLDFKIFGLETIKDQYVHDAEFKDVLQNCKEG--RTWNKFVLNDGFVFRANKLCIP 1232
Query: 1459 *TSLHEFLVWELHAGGLTGHFGNENTI*VEYC-YNWPCLKRDVAKYMGQCHVCQLAK*RK 1635
+S+ L+ E H GGL GHFG + T + + WP ++RDV +++ +C CQ AK R
Sbjct: 1233 ASSVRLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRRDVERFVARCTTCQRAKSRL 1292
Query: 1636 HNTGLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
+ GLY PLPVP P +DI+MDFVLG P+T + DS VVD FSKM HF+
Sbjct: 1293 NPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFI 1343
Score = 130 bits (326), Expect(9) = e-154
Identities = 66/118 (55%), Positives = 83/118 (70%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF DVF D+ LPP+R ++H IDL+ G SLPN YR NP E E+ RQV+ELL+KG+
Sbjct: 731 EFTDVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIMRQVQELLDKGY 790
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
+RES+SPC VP +L KK+G RMCVD I ++YR PIPRL+DMLD LSG+ F
Sbjct: 791 IRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRYRHPIPRLDDMLDELSGSTIF 848
Score = 80.9 bits (198), Expect(9) = e-154
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DA VA +FF ++++LHG+ +IV D D KF S+F + LW K+G KL FST HP TDGQ
Sbjct: 1350 DAVNVADLFFREIIRLHGVPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQ 1409
Query: 1971 TDVMN*SL*NLLRA 2012
T+V+N +L +LRA
Sbjct: 1410 TEVVNRTLSTMLRA 1423
Score = 79.7 bits (195), Expect(9) = e-154
Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCF-DIFIYIQSREQHLDHL*T 593
K LYEW+VM FGLTN PSTFM +M +VL FIG+F+VV F DI IY +S E+HL+HL
Sbjct: 875 KFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSKSLEEHLEHLRA 934
Query: 594 VFAVLR 611
VF LR
Sbjct: 935 VFIALR 940
Score = 70.9 bits (172), Expect(9) = e-154
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = +3
Query: 852 FVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNE 1028
FVW +AF LK ++ A ++ L +F+K F++ CDA I +G VL Q+G PVAYF+E
Sbjct: 1026 FVWGTAQEEAFTVLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYFSE 1085
Query: 1029 KLNDARLRYEMYDNEF*TMIQSL-YG*HYLLP*E 1127
K + L Y YD E ++++L HYL P E
Sbjct: 1086 KFSGPSLNYSTYDKELYALVRTLETWQHYLWPKE 1119
Score = 65.9 bits (159), Expect(9) = e-154
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
S++ TT P+EIV+G+ PR IDL+P+ K + A + I ++++ I N
Sbjct: 1446 SLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMN 1505
Query: 2257 VDYKLRS*Y*EKS*NF*----YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTINDN 2424
YKL K F W L+ D F + L + PF VL+ INDN
Sbjct: 1506 AKYKLARDKGRKHVVFAPGDLVW-LHLRKDRFPNLRKSKLMP---RADGPFKVLEKINDN 1561
Query: 2425 VYIVDVSKDFGISFTFNVENLATYNGHDFNL 2517
Y +++ DFG+S TFN+ +L Y G + L
Sbjct: 1562 AYKLELPADFGVSPTFNIADLKPYLGEEDEL 1592
Score = 52.0 bits (123), Expect(9) = e-154
Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 634 KCTFFTTQXXXXXXXXXXXXXX-DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGF 810
KCTF T + D KI AI W PK + VR F GLA FY RF++ F
Sbjct: 950 KCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPHPKTVTQVRSFLGLAGFYRRFVRDF 1009
Query: 811 CTIVASITD*LKKSL 855
TI A + + KK +
Sbjct: 1010 STIAAPLNEVTKKDV 1024
Score = 51.6 bits (122), Expect(9) = e-154
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK 420
+FSK+DL+SG HQI ++LGDEWKT FKTK
Sbjct: 847 IFSKVDLRSGYHQIRMKLGDEWKTTFKTK 875
Score = 20.4 bits (41), Expect(9) = e-154
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 2036 WDLKLSIIEFAYNNLL 2083
W+ L IEFAYN L
Sbjct: 1432 WEECLPHIEFAYNRSL 1447
>ref|XP_020703187.1| uncharacterized protein LOC110114598 [Dendrobium catenatum]
Length = 1862
Score = 185 bits (469), Expect(7) = e-149
Identities = 96/225 (42%), Positives = 142/225 (63%), Gaps = 5/225 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNFVLN-- 1302
V+Y+DH+AL ++ SQKKL + + W+EFL + F ++HKA N+ ADAL++C+ +L
Sbjct: 902 VLYTDHEALRFLNSQKKLKGRHATWLEFLATFNFVIKHKAGRLNQPADALSRCHLLLQTL 961
Query: 1303 -KKTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
K G E + Y + DF I+ + +T+ + + +G+LF G LC+ S+
Sbjct: 962 QNKVLGMETFKDLYATDADFQTIWSKC---LTQPYKLFHIKEGYLFHGPCLCVPRGSIRL 1018
Query: 1477 FLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGLY 1653
+V E H GGL GHFG + T+ ++ + WP L RDV KY+ C VC++AK + N GLY
Sbjct: 1019 AIVSECHDGGLMGHFGRDKTLSLIQEKFYWPALSRDVGKYVQSCRVCRIAKTQGTNAGLY 1078
Query: 1654 TPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
+PLPVPK P +D+++DFVLG P+T R DS + VVD FSKM HF+
Sbjct: 1079 SPLPVPKAPWEDVSLDFVLGLPRTQRNKDSIMVVVDRFSKMAHFV 1123
Score = 147 bits (372), Expect(7) = e-149
Identities = 104/245 (42%), Positives = 136/245 (55%), Gaps = 11/245 (4%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*T 593
++ LYEW VM FGL+N PSTFM +M QV PF+ KF+VV FD I IYI S E+HL HL
Sbjct: 657 RDGLYEWTVMPFGLSNAPSTFMRLMNQVFQPFLCKFVVVYFDDILIYIGSLEEHLQHLRL 716
Query: 594 VFAVLR--KSYM*IQKVYFLHNT-SLVSLICSLCWSIC*PRKD*SD*RVA*TQEYL*CEV 764
V LR K Y I+K FL N + I S P+K + Q +
Sbjct: 717 VLGKLREQKLYGHIEKCKFLDNRIEFLGFIISAAEIEADPKKIEAIENWPIPQSFTDIRR 776
Query: 765 FSWTSYLLSSVH*GILYNRG-----LNYRLTEEKFVWSREATKAFVELKKRMVEASVMHL 929
F + L+S + + N + L E F WS F LKK + + V+ L
Sbjct: 777 F----HGLASFYRRFIRNFSSIAAPITEILKSEPFTWSSGVQYNFELLKKALTSSPVLRL 832
Query: 930 LDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMIQSL-YG 1103
DFSKVF+V CDA + IG VLSQEGHP+A+F+EKLN+AR +Y YD EF ++++L +
Sbjct: 833 PDFSKVFEVECDASYVGIGAVLSQEGHPIAFFSEKLNEARQKYSTYDKEFYALVRALHHW 892
Query: 1104 *HYLL 1118
HYLL
Sbjct: 893 NHYLL 897
Score = 127 bits (318), Expect(7) = e-149
Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 6/122 (4%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF DVF D++ LPPLRDVQH I+LV G LPN YR+ P E+ +L+ +EELL KGF
Sbjct: 511 EFCDVFPDEIPAGLPPLRDVQHEIELVPGAMLPNRPPYRIRPDEYDQLQLHIEELLSKGF 570
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASFFL 343
++ S+SPC VP LL KK+G RMC+D KI V+YRFPIPR++D+ D L G A FF
Sbjct: 571 IKTSVSPCAVPVLLVPKKDGSFRMCMDSRAINKITVRYRFPIPRIDDLFDQLHG-AKFFS 629
Query: 344 KL 349
K+
Sbjct: 630 KI 631
Score = 89.0 bits (219), Expect(7) = e-149
Identities = 41/81 (50%), Positives = 62/81 (76%)
Frame = +3
Query: 1788 VDASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDG 1967
+DAS +A ++ ++V++HG+ +I D DVKF SYF K LW K+GT+L++S+A HP TDG
Sbjct: 1129 MDASHIADLYLKEIVRIHGIPLTITSDRDVKFMSYFWKTLWSKLGTRLQYSSAAHPQTDG 1188
Query: 1968 QTDVMN*SL*NLLRAPMGEHI 2030
QT+V+N SL NLLR +G+++
Sbjct: 1189 QTEVVNRSLGNLLRCFVGKNL 1209
Score = 47.8 bits (112), Expect(7) = e-149
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
SVN++T KSP+EIV+G P +DLIP+ H + + I +L++Q+ + I + N
Sbjct: 1226 SVNQSTHKSPFEIVYGRNPLTPVDLIPIVQHTTFNSDGEQRSKEIQKLHQQVHDEIVKQN 1285
Query: 2257 VDYK 2268
Y+
Sbjct: 1286 DRYR 1289
Score = 46.2 bits (108), Expect(7) = e-149
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1
Query: 337 FSKIDLKSGCHQIHIRLGDEWKTIFKTKI 423
FSKIDL+SG HQI +R GDEWKT F K+
Sbjct: 628 FSKIDLRSGYHQIRLRAGDEWKTAFIFKV 656
Score = 25.0 bits (53), Expect(7) = e-149
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 2018 GRTYWDWDLKLSIIEFAYN 2074
G+ WDL L+ IEFA+N
Sbjct: 1206 GKNLKQWDLVLAQIEFAFN 1224
>gb|PKU86468.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 905
Score = 185 bits (469), Expect(7) = e-149
Identities = 96/225 (42%), Positives = 142/225 (63%), Gaps = 5/225 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNFVLN-- 1302
V+Y+DH+AL ++ SQKKL + + W+EFL + F ++HKA N+ ADAL++C+ +L
Sbjct: 485 VLYTDHEALRFLNSQKKLKGRHATWLEFLATFNFVIKHKAGRLNQPADALSRCHLLLQTL 544
Query: 1303 -KKTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
K G E + Y + DF I+ + +T+ + + +G+LF G LC+ S+
Sbjct: 545 QNKVLGMETFKDLYATDADFQTIWSKC---LTQPYKLFHIKEGYLFHGPCLCVPRGSIRL 601
Query: 1477 FLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGLY 1653
+V E H GGL GHFG + T+ ++ + WP L RDV KY+ C VC++AK + N GLY
Sbjct: 602 AIVSECHDGGLMGHFGRDKTLSLIQEKFYWPALSRDVGKYVQSCRVCRIAKTQGTNAGLY 661
Query: 1654 TPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
+PLPVPK P +D+++DFVLG P+T R DS + VVD FSKM HF+
Sbjct: 662 SPLPVPKAPWEDVSLDFVLGLPRTQRNKDSIMVVVDRFSKMAHFV 706
Score = 147 bits (372), Expect(7) = e-149
Identities = 104/245 (42%), Positives = 136/245 (55%), Gaps = 11/245 (4%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*T 593
++ LYEW VM FGL+N PSTFM +M QV PF+ KF+VV FD I IYI S E+HL HL
Sbjct: 240 RDGLYEWTVMPFGLSNAPSTFMRLMNQVFQPFLCKFVVVYFDDILIYIGSLEEHLQHLRL 299
Query: 594 VFAVLR--KSYM*IQKVYFLHNT-SLVSLICSLCWSIC*PRKD*SD*RVA*TQEYL*CEV 764
V LR K Y I+K FL N + I S P+K + Q +
Sbjct: 300 VLGKLREQKLYGHIEKCKFLDNRIEFLGFIISAAEIEADPKKIEAIENWPIPQSFTDIRR 359
Query: 765 FSWTSYLLSSVH*GILYNRG-----LNYRLTEEKFVWSREATKAFVELKKRMVEASVMHL 929
F + L+S + + N + L E F WS F LKK + + V+ L
Sbjct: 360 F----HGLASFYRRFIRNFSSIAAPITEILKSEPFTWSSGVQYNFELLKKALTSSPVLRL 415
Query: 930 LDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMIQSL-YG 1103
DFSKVF+V CDA + IG VLSQEGHP+A+F+EKLN+AR +Y YD EF ++++L +
Sbjct: 416 PDFSKVFEVECDASYVGIGAVLSQEGHPIAFFSEKLNEARQKYSTYDKEFYALVRALHHW 475
Query: 1104 *HYLL 1118
HYLL
Sbjct: 476 NHYLL 480
Score = 127 bits (318), Expect(7) = e-149
Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 6/122 (4%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF DVF D++ LPPLRDVQH I+LV G LPN YR+ P E+ +L+ +EELL KGF
Sbjct: 94 EFCDVFPDEIPAGLPPLRDVQHEIELVPGAMLPNRPPYRIRPDEYDQLQLHIEELLSKGF 153
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASFFL 343
++ S+SPC VP LL KK+G RMC+D KI V+YRFPIPR++D+ D L G A FF
Sbjct: 154 IKTSVSPCAVPVLLVPKKDGSFRMCMDSRAINKITVRYRFPIPRIDDLFDQLHG-AKFFS 212
Query: 344 KL 349
K+
Sbjct: 213 KI 214
Score = 89.0 bits (219), Expect(7) = e-149
Identities = 41/81 (50%), Positives = 62/81 (76%)
Frame = +3
Query: 1788 VDASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDG 1967
+DAS +A ++ ++V++HG+ +I D DVKF SYF K LW K+GT+L++S+A HP TDG
Sbjct: 712 MDASHIADLYLKEIVRIHGIPLTITSDRDVKFMSYFWKTLWSKLGTRLQYSSAAHPQTDG 771
Query: 1968 QTDVMN*SL*NLLRAPMGEHI 2030
QT+V+N SL NLLR +G+++
Sbjct: 772 QTEVVNRSLGNLLRCFVGKNL 792
Score = 47.8 bits (112), Expect(7) = e-149
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
SVN++T KSP+EIV+G P +DLIP+ H + + I +L++Q+ + I + N
Sbjct: 809 SVNQSTHKSPFEIVYGRNPLTPVDLIPIVQHTTFNSDGEQRSKEIQKLHQQVHDEIVKQN 868
Query: 2257 VDYK 2268
Y+
Sbjct: 869 DRYR 872
Score = 46.2 bits (108), Expect(7) = e-149
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1
Query: 337 FSKIDLKSGCHQIHIRLGDEWKTIFKTKI 423
FSKIDL+SG HQI +R GDEWKT F K+
Sbjct: 211 FSKIDLRSGYHQIRLRAGDEWKTAFIFKV 239
Score = 25.0 bits (53), Expect(7) = e-149
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 2018 GRTYWDWDLKLSIIEFAYN 2074
G+ WDL L+ IEFA+N
Sbjct: 789 GKNLKQWDLVLAQIEFAFN 807
>gb|PKU64035.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 944
Score = 182 bits (461), Expect(6) = e-145
Identities = 96/225 (42%), Positives = 140/225 (62%), Gaps = 5/225 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNFVLNK- 1305
V+Y+DH+AL Y+ SQKKL + + W EFL + + ++HKA N+AADAL++C+ +L
Sbjct: 470 VLYTDHEALRYLNSQKKLKGRHAAWSEFLASFNYVIKHKAGHLNQAADALSRCHLLLQTL 529
Query: 1306 --KTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
K G E + Y DF I++Q + + + + DG+LF G LCI S
Sbjct: 530 QTKVLGMENFKDLYSVDADFKLIWNQC---LHQPYKLFHIKDGYLFHGHSLCIPRGSNRL 586
Query: 1477 FLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGLY 1653
++ E H GGL GHFG + T+ ++ + WP L RDV +Y+ C VC++AK + N GLY
Sbjct: 587 AIITEFHEGGLMGHFGRDKTLNLIQEKFYWPLLSRDVGRYVQGCRVCRMAKTQGTNAGLY 646
Query: 1654 TPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
+PLPVPK P +D+++DFVLG P+T R DS + VV+ FSKM HF+
Sbjct: 647 SPLPVPKAPWEDVSLDFVLGLPRTQRNKDSIMVVVNRFSKMAHFV 691
Score = 142 bits (359), Expect(6) = e-145
Identities = 98/245 (40%), Positives = 139/245 (56%), Gaps = 11/245 (4%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*T 593
++ LYEW VM FGL+N PSTF +M QV PF+ KF+VV FD I I+ ++ E+HL H+
Sbjct: 225 RDGLYEWTVMPFGLSNAPSTFTRLMNQVFQPFLCKFVVVYFDDILIFSENIEEHLQHIRL 284
Query: 594 VFAVLR--KSYM*IQKVYFLHNT-SLVSLICSLCWSIC*PRKD*SD*RVA*TQEYL*CEV 764
V LR K Y I K FL + + + S+ PRK + Q +
Sbjct: 285 VLCKLREQKLYGHIGKSKFLDSKIEFLCFVVSVSGIEADPRKIEAIVSWPTPQSFTEVRR 344
Query: 765 FSWTSYLLSSVH*GILYNRG-----LNYRLTEEKFVWSREATKAFVELKKRMVEASVMHL 929
F + L+S + + N + L E FVWS A +F LKK + + V++L
Sbjct: 345 F----HGLASFYRRFIKNFSSIAAPITESLKSESFVWSSSAQSSFELLKKAVTTSPVLNL 400
Query: 930 LDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMIQSL-YG 1103
DF+KVF+V CDA + IG VLSQ+GHP+A+F+EKLN+AR +Y YD EF ++++L +
Sbjct: 401 PDFNKVFEVECDASNVGIGAVLSQDGHPIAFFSEKLNEARQKYSTYDKEFYALVRALHHW 460
Query: 1104 *HYLL 1118
HYLL
Sbjct: 461 NHYLL 465
Score = 117 bits (293), Expect(6) = e-145
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF DVF +++ LPP R++QH I+L+ G LPN YR+ P E+ L+ Q+E+LL KGF
Sbjct: 81 EFCDVFPEEIPAGLPPAREIQHEIELIPGAVLPNRPPYRIRPDEYEHLQLQIEDLLSKGF 140
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
++ S+S C VP LL KK+G RMC+D KI V+YRFPIPR++D+ D L GA F
Sbjct: 141 IKPSVSSCAVPVLLVPKKDGSYRMCMDSRAMNKITVRYRFPIPRIDDLFDQLHGAKVF 198
Score = 84.3 bits (207), Expect(6) = e-145
Identities = 38/74 (51%), Positives = 57/74 (77%)
Frame = +3
Query: 1788 VDASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDG 1967
+DAS +A ++ ++V+++G+ +I D D+KF SYF K LW K+GT+L++S+A HP TDG
Sbjct: 697 LDASHIANLYLKEIVRIYGIPMTITSDRDIKFMSYFWKTLWSKLGTRLQYSSAAHPQTDG 756
Query: 1968 QTDVMN*SL*NLLR 2009
QT+V+N SL NLLR
Sbjct: 757 QTEVVNRSLGNLLR 770
Score = 60.5 bits (145), Expect(6) = e-145
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
SVN++T +SP+EIV+G P +DLIP+ + + I +L++Q+ + I + N
Sbjct: 794 SVNQSTRRSPFEIVYGRNPLTPLDLIPIVQQTAYNLDGEQRSKEIQKLHQQVQDEIIKQN 853
Query: 2257 VDYKLRS*Y*EKS*NF*YW*LYDGSDPFGKVSLWNLYEVHAHSA------WPFNVLKTIN 2418
Y+ ++ K +Y D + A S PF V+K IN
Sbjct: 854 EKYRAQANRHRKK------VIYQEGDLVWIRLRKERFPAKAFSKLKPRADGPFRVVKRIN 907
Query: 2419 DNVYIVDVSKDFGISFTFNVENLATY 2496
DN Y++D+ D+ I FNV +L +
Sbjct: 908 DNAYLIDLPGDYNILAVFNVADLTPH 933
Score = 47.4 bits (111), Expect(6) = e-145
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK 420
+FSKIDL+SG HQI +R GDEWKT FK +
Sbjct: 197 VFSKIDLRSGYHQIRLREGDEWKTAFKVR 225
>gb|PKU87302.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 1459
Score = 192 bits (488), Expect(5) = e-144
Identities = 96/225 (42%), Positives = 150/225 (66%), Gaps = 5/225 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNFVLNK- 1305
++++DH++L ++ Q KLN + + WVE+L + ++L++K+ N+ ADAL++ + +LN
Sbjct: 962 ILFTDHQSLKHLQYQSKLNTRHAKWVEYLSSFHYSLKYKSGTTNQVADALSRRHMLLNTL 1021
Query: 1306 --KTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
KT GFE I + YE PDF++I+ + + + L +LF G KLCI SL E
Sbjct: 1022 QVKTVGFEIIKDLYEKDPDFAKIWQLC---LLKPYKFFHLEQKYLFKGNKLCIPQGSLRE 1078
Query: 1477 FLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGLY 1653
+++E H GGL GHFG + T+ + + WP L++DV +++ +CH+C++AK +HNTGLY
Sbjct: 1079 AIIFENHNGGLAGHFGRDKTLALIHENFYWPSLEKDVTRHIKRCHICKMAKTTQHNTGLY 1138
Query: 1654 TPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
PLPVP+ P D++MDFVLG P T RK+D+ + VVD FSKM HF+
Sbjct: 1139 LPLPVPESPWIDVSMDFVLGLPITQRKNDAIMVVVDRFSKMAHFI 1183
Score = 140 bits (353), Expect(5) = e-144
Identities = 100/255 (39%), Positives = 141/255 (55%), Gaps = 21/255 (8%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*T 593
++ LYEW VM FGL+N PSTFM +M QV ++ KFLV+ FD I IY Q+ E+HL HL
Sbjct: 717 RDGLYEWTVMPFGLSNAPSTFMRLMNQVFRSYLNKFLVIYFDDILIYSQNMEEHLQHLKQ 776
Query: 594 VFAVLRKSYM*IQKVYFLHNTS---LVSLICSLCWSIC*PRKD*SD*RVA*TQEYL*CEV 764
VF VL + ++ F + T LV I L + I + +V +
Sbjct: 777 VFLVLLEQHL------FANTTKCEFLVDTIKFLGFVISPTGLEMDFDKVK--------AI 822
Query: 765 FSWTS----------YLLSSVH*GILYNRG-----LNYRLTEEKFVWSREATKAFVELKK 899
W + + L+S + + N L L +F W++ A ++F +LK
Sbjct: 823 HGWPTPTSINDVRRFHGLASFYRRFIQNFSMVAAPLTEILKRPQFEWTKAAQESFDQLKD 882
Query: 900 RMVEASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF 1076
M A V+ L +FSKVF+V CDA + IG VLSQEGHPVAYF+EKLN++R +Y +YD EF
Sbjct: 883 LMQRAPVLTLPNFSKVFEVECDASQNGIGAVLSQEGHPVAYFSEKLNESRQKYSIYDKEF 942
Query: 1077 *TMIQSL-YG*HYLL 1118
++++L Y HYLL
Sbjct: 943 YAIVRALQYWSHYLL 957
Score = 126 bits (317), Expect(5) = e-144
Identities = 65/118 (55%), Positives = 81/118 (68%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF VF D L +PP+R+VQH +D + G +PN YRM+P + EL+RQVEEL+ GF
Sbjct: 573 EFHQVFPDKLPTGVPPMREVQHAVDFIPGSVIPNRPTYRMSPKNYEELQRQVEELISAGF 632
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
VR S SPC VPALL KK+G RMC+D KI +KYRFPIPR++D+ D LSGA F
Sbjct: 633 VRPSASPCAVPALLVPKKDGTWRMCIDSRTVNKITIKYRFPIPRVDDLFDQLSGACIF 690
Score = 91.3 bits (225), Expect(5) = e-144
Identities = 44/80 (55%), Positives = 61/80 (76%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DAS +A+++F +VV+LHG+ K+I D DVKF S+F + LW K+GTKL+FS+ HP TDGQ
Sbjct: 1190 DASHIARLYFHEVVRLHGIPKTITSDRDVKFLSHFWRTLWSKLGTKLQFSSTAHPQTDGQ 1249
Query: 1971 TDVMN*SL*NLLRAPMGEHI 2030
T+ +N SL NLLR +G+ I
Sbjct: 1250 TESVNRSLGNLLRCFVGKSI 1269
Score = 57.0 bits (136), Expect(5) = e-144
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
S N+TTG+SP+EIV+G P ++L P+ S A + I +L+KQI I + N
Sbjct: 1286 SRNQTTGRSPFEIVYGQNPTGPLELTPLLSSTAHSLDADTRVKEIQQLHKQIQQHIQKQN 1345
Query: 2257 VDYKLRS*Y*EKS*NF*YW*LYDGSDPFGKVSLWNL-----YEVHAHSAWPFNVLKTIND 2421
Y+ ++ + F +G + ++S ++ + PF +L+ IND
Sbjct: 1346 TKYQQQANKSRRGETF-----KEGDLVWIRLSKERFPNRRYNKLQPKAKGPFRILRRIND 1400
Query: 2422 NVYIVDVSKDFGISFTFNVENLA 2490
N + +++ + IS FN+ +L+
Sbjct: 1401 NAFQIELLDNLQISPVFNISDLS 1423
Score = 79.7 bits (195), Expect = 3e-11
Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK------IVFMNGWS------CSLD*PMFRAR 477
+FSKIDL+SG HQI +R GDEWKT FKT+ V G S L +FR+
Sbjct: 689 IFSKIDLRSGYHQIRMRPGDEWKTAFKTRDGLYEWTVMPFGLSNAPSTFMRLMNQVFRSY 748
Query: 478 SCE**NKYCTLL*ESF**SALIFSSTFNLVSNTWTICEQSLLY*ERAI-CKSKKCTFFT- 651
NK+ + + LI+S N+ + + + L+ E+ + + KC F
Sbjct: 749 L----NKFLVIYFDDI----LIYSQ--NMEEHLQHLKQVFLVLLEQHLFANTTKCEFLVD 798
Query: 652 TQXXXXXXXXXXXXXXDPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASI 831
T D +K++AI+ W P +I DVR FHGLA+FY RFI+ F + A +
Sbjct: 799 TIKFLGFVISPTGLEMDFDKVKAIHGWPTPTSINDVRRFHGLASFYRRFIQNFSMVAAPL 858
Query: 832 TD*LKK 849
T+ LK+
Sbjct: 859 TEILKR 864
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 181 bits (459), Expect(6) = e-142
Identities = 102/232 (43%), Positives = 145/232 (62%), Gaps = 6/232 (2%)
Frame = +1
Query: 1111 IYCRKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCN 1290
++ ++ VI+SDH+AL Y+ Q KLN + + WVEF++ + + +++K +N ADAL++ N
Sbjct: 1074 LWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKN 1133
Query: 1291 FVLNK---KTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL 1458
+LN+ K G E I E Y + DFSE Y + G + + Y +HDGFLF KLC+
Sbjct: 1134 VLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTAG--KGWEKYHIHDGFLFRANKLCVP 1191
Query: 1459 *TSLHEFLVWELHAGGLTGHFGNENT--I*VEYCYNWPCLKRDVAKYMGQCHVCQLAK*R 1632
S+ L+ E HAGGL GHFG T + ++ Y WP ++RDV + + +C C AK +
Sbjct: 1192 HCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFY-WPKMRRDVQRLVQRCVTCHKAKSK 1250
Query: 1633 KHNTGLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
+ GLYTPLPVP P +DI+MDFVLG P+T R DS VVD FSKM HF+
Sbjct: 1251 LNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFI 1302
Score = 124 bits (312), Expect(6) = e-142
Identities = 65/118 (55%), Positives = 83/118 (70%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
E+ DVF ++ LPPLR ++H IDL+ G +LPN YR NP E E++RQV+ LL+KG+
Sbjct: 690 EYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGY 749
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
VRES+SPC VP +L KK+G RMCVD I V+YR PIPRL+DMLD LSG+ F
Sbjct: 750 VRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIF 807
Score = 90.5 bits (223), Expect(6) = e-142
Identities = 44/74 (59%), Positives = 56/74 (75%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DAS +A +FF ++V+LHG+ K+IV D D KF SYF K LW K+GT+L FST HP TDGQ
Sbjct: 1309 DASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQ 1368
Query: 1971 TDVMN*SL*NLLRA 2012
T+V+N +L LLRA
Sbjct: 1369 TEVVNRTLSMLLRA 1382
Score = 84.0 bits (206), Expect(6) = e-142
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 14/189 (7%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK------IVFMNGWSCS------LD*PMFRAR 477
+FSKIDL+SG HQI +++GDEWKT FKTK +V G + + L + RA
Sbjct: 806 IFSKIDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAF 865
Query: 478 SCE**NKYCTLL*ESF**SALIFSSTFNL-VSNTWTICEQSLLY*ERAICKSKKCTFFTT 654
K+ + + LI+S T V++ + + +L E+ +KCTF T
Sbjct: 866 I----GKFVVVYFDDI----LIYSKTLEEHVAHIQQVLD--VLRKEQLYANLEKCTFCTD 915
Query: 655 QXXXXXXXXXXXXXX-DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASI 831
Q D K++AI +W P+N+ V+ F GLA FY RF++GF TI A +
Sbjct: 916 QVVFLGFVVSGLGIQVDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPL 975
Query: 832 TD*LKKSLS 858
+ KK ++
Sbjct: 976 NELTKKGVA 984
Score = 83.6 bits (205), Expect(6) = e-142
Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Frame = +3
Query: 852 FVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDI-GVLSQEGHPVAYFNE 1028
F W KAF ELKKR+ E ++ L DF+K F+V CDA I I GVL Q G PVAYF+E
Sbjct: 985 FQWGEPQEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSE 1044
Query: 1029 KLNDARLRYEMYDNEF*TMIQSL-YG*HYLLP*E 1127
KL A+L Y +YD E ++++L HYL P E
Sbjct: 1045 KLGGAQLNYSVYDKELYALVRALETWQHYLWPKE 1078
Score = 60.1 bits (144), Expect(6) = e-142
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
+V+ TT P+E+V+G++P IDL+P+ ++ A A ++ +++++ I + +
Sbjct: 1405 AVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRS 1464
Query: 2257 VDYKLRS*Y*EKS*NF*----YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTINDN 2424
Y + K F W ++ D F + L PF VL INDN
Sbjct: 1465 KYYAAWANKNRKKVTFEPGDLVW-VHLRKDRFPQKRKSKLMP---RGDGPFRVLSKINDN 1520
Query: 2425 VYIVDVSKDFGISFTFNVENLATYNG 2502
Y +++ +D+G+S TFNV +L + G
Sbjct: 1521 AYKIELPEDYGVSSTFNVADLTPFFG 1546
>ref|XP_017255857.1| PREDICTED: transposon Ty3-I Gag-Pol polyprotein isoform X1 [Daucus
carota subsp. sativus]
Length = 1415
Score = 184 bits (466), Expect(6) = e-142
Identities = 100/228 (43%), Positives = 142/228 (62%), Gaps = 5/228 (2%)
Frame = +1
Query: 1120 RKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNFVL 1299
R+ ++ SDH+AL +I SQ+ L+ + + WV FLQ +TFT+RHKA + NK ADAL++ L
Sbjct: 946 REFILNSDHEALKFINSQQHLSQRHAKWVSFLQRFTFTIRHKAGIQNKVADALSRKASFL 1005
Query: 1300 NK---KTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TS 1467
+ + GF+ + Y F I+ + G E Y L +GFLF G +LCI S
Sbjct: 1006 TEMRVEVEGFDTFKDLYADDKFFGPIFQAILQG---EHSEYQLQEGFLFKGLQLCIPECS 1062
Query: 1468 LHEFLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNT 1644
L E +V E HA GHFG + T+ +E Y WP LKRDV +++ +CH CQ +K N
Sbjct: 1063 LREKIVMEKHA---LGHFGRDKTVALIENKYFWPKLKRDVTRHVERCHTCQRSKGGSTNA 1119
Query: 1645 GLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
GLYTPLP+P +P D++MDFV+G P+T ++ DS + VVD +SKM HF+
Sbjct: 1120 GLYTPLPIPSFPWNDVSMDFVVGLPRTQKRTDSVMVVVDRYSKMAHFV 1167
Score = 135 bits (339), Expect(6) = e-142
Identities = 69/118 (58%), Positives = 86/118 (72%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
E+ D+ ++L LPP+RD+QH IDL+ G SLPN YRM+P EH EL+RQVEE + KG
Sbjct: 559 EYKDLTPEELPPGLPPMRDIQHQIDLIPGSSLPNKPAYRMSPKEHDELRRQVEEAIAKGL 618
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
+RES+SPC VPALL+ KK+G RMCVD KI VKYR+PIPR D+LD L+GA F
Sbjct: 619 IRESLSPCAVPALLTPKKDGTWRMCVDSRAINKITVKYRYPIPRFEDLLDQLAGAKIF 676
Score = 122 bits (305), Expect(6) = e-142
Identities = 97/257 (37%), Positives = 139/257 (54%), Gaps = 23/257 (8%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*T 593
++ LYEW+VM FGL+N PSTFM VM VL PF+ + +VV FD I IY + E H L
Sbjct: 703 RDGLYEWLVMPFGLSNAPSTFMRVMNHVLKPFLRRCVVVYFDDILIYSPTLEAHKQDLKE 762
Query: 594 VFAVLR--KSYM*IQKVYF-LHNTSLVSLICSLCWSIC*PRKD*SD*RVA*TQEYL*CEV 764
VF LR K Y+ ++K F +HN + I S D V Q + +
Sbjct: 763 VFESLRQEKLYINLKKCNFAVHNVLFLGYIIS-------------DQGVKVDQTKVQA-I 808
Query: 765 FSW----TSYLLSSVH*GI--LYNR------GLNYRLTE-----EKFVWSREATKAFVEL 893
W T + + S H G+ Y R L +T+ + W++EA ++F +
Sbjct: 809 LDWPTPRTIHEVRSFH-GLASFYRRFIRNFSSLVAPITDCIKSVKTLSWTQEAEESFQLI 867
Query: 894 KKRMVEASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDN 1070
K+++ A V+ L DF KVF+V CDA ++ IG VLSQEG P+A+++EKL +R Y YD
Sbjct: 868 KRKISAAPVLALPDFDKVFEVDCDASKVGIGAVLSQEGRPIAFYSEKLTGSRCHYSTYDA 927
Query: 1071 EF*TMIQSL-YG*HYLL 1118
EF +IQ+L + HYL+
Sbjct: 928 EFYAIIQALKHWEHYLV 944
Score = 90.1 bits (222), Expect(6) = e-142
Identities = 42/79 (53%), Positives = 60/79 (75%)
Frame = +3
Query: 1788 VDASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDG 1967
+DAS VA+++F ++ +LHG+ +SI D D KF +F + LW K+GT+L+FSTA+HP TDG
Sbjct: 1173 MDASHVAELYFKEIFRLHGVPRSITSDRDTKFMGHFWRTLWKKIGTELRFSTAYHPETDG 1232
Query: 1968 QTDVMN*SL*NLLRAPMGE 2024
QT+V+N SL NLLR G+
Sbjct: 1233 QTEVVNRSLGNLLRCFAGD 1251
Score = 64.7 bits (156), Expect(6) = e-142
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
S NRTT SP+E+V G P ++DL P+ + K S A I E+++Q+ + I +N
Sbjct: 1270 SKNRTTQLSPFEVVGGLSPNTVLDLAPIPNPKKASAKAEEMVERIKEIHEQVRDHIEASN 1329
Query: 2257 VDYKLRS*Y*EKS*NF*YW*LYDGSDPFGKVSLWNL-----YEVHAHSAWPFNVLKTIND 2421
+ YK + + F +G + + ++ +++H P +LK +ND
Sbjct: 1330 LKYKAAADIHRRKVIF-----KEGDNVWAVLTKDRFLPGENHKLHDRKVGPCKILKRVND 1384
Query: 2422 NVYIVDVSKDFGISFTFNVENLATYNG 2502
N Y + + S FNV++L Y G
Sbjct: 1385 NAYQLKLPSHIKSSDVFNVKHLLPYKG 1411
Score = 25.8 bits (55), Expect(6) = e-142
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 2036 WDLKLSIIEFAYNN 2077
WDL L EFAYNN
Sbjct: 1256 WDLVLPFAEFAYNN 1269
Score = 82.0 bits (201), Expect = 5e-12
Identities = 67/185 (36%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK------IVFMNGWSCSLD*PM-FRARSCE** 492
+FSKIDL+SG HQI IR GDEWKT FKT+ +V G S + M +
Sbjct: 675 IFSKIDLRSGYHQIRIRPGDEWKTAFKTRDGLYEWLVMPFGLSNAPSTFMRVMNHVLKPF 734
Query: 493 NKYCTLL*ESF**SALIFSSTFNLVSNTWTICEQSLLY*ERAICKSKKCTFFT-TQXXXX 669
+ C ++ + LI+S T +SL E+ KKC F
Sbjct: 735 LRRCVVV---YFDDILIYSPTLEAHKQDLKEVFESLRQ-EKLYINLKKCNFAVHNVLFLG 790
Query: 670 XXXXXXXXXXDPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD*LK- 846
D K++AI +W P+ I +VR FHGLA+FY RFI+ F ++VA ITD +K
Sbjct: 791 YIISDQGVKVDQTKVQAILDWPTPRTIHEVRSFHGLASFYRRFIRNFSSLVAPITDCIKS 850
Query: 847 -KSLS 858
K+LS
Sbjct: 851 VKTLS 855
>ref|XP_022847564.1| uncharacterized protein LOC111370094 [Olea europaea var. sylvestris]
Length = 1453
Score = 242 bits (617), Expect(4) = e-141
Identities = 119/226 (52%), Positives = 162/226 (71%), Gaps = 6/226 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNF----V 1296
V+YSDH+AL Y+ SQK+++++ WVE LQ Y+F L+HK ++N+AADAL+ C +
Sbjct: 961 VLYSDHEALRYLNSQKRISSRHGRWVEHLQAYSFVLKHKKGMENQAADALS-CRVSLLSI 1019
Query: 1297 LNKKTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLH 1473
++ K GFE + E YE+CPDF +I+ L+ G + DG+ L +G+LF KLCI TS+
Sbjct: 1020 MSVKVIGFERLKEDYEACPDFKDIFLNLQKGQSGATDGFRLEEGYLFRANKLCIPRTSVR 1079
Query: 1474 EFLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGL 1650
+F+VWE+HAGGL GHFG + TI VE + WP LK+DVAK + C+ CQL+K +K NTGL
Sbjct: 1080 DFIVWEIHAGGLAGHFGRDKTIEEVECQFYWPSLKKDVAKIVSTCNACQLSKQKKQNTGL 1139
Query: 1651 YTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
YTPLPVP P QD++M+FVLG P+T +KHDS VVD FSKM HF+
Sbjct: 1140 YTPLPVPNCPWQDVSMNFVLGLPRTPKKHDSIFVVVDRFSKMAHFI 1185
Score = 152 bits (385), Expect(4) = e-141
Identities = 107/250 (42%), Positives = 140/250 (56%), Gaps = 21/250 (8%)
Frame = +3
Query: 441 VMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*TVFAVLRKS 617
VM FGL+NVPSTFM VM Q L PF+GKF VV FD I IY +S+EQHLDHL V++ R +
Sbjct: 724 VMPFGLSNVPSTFMRVMTQTLRPFMGKFRVVYFDDILIYSKSKEQHLDHLTQVYSTFRAT 783
Query: 618 --YM*IQKVYFLHNTSL-VSLICSLCWSIC*PRKD*SD*RVA*TQEYL*CEVFSWTS--- 779
Y ++K F NT + + I S P + + + W
Sbjct: 784 NLYANVKKCSFFTNTVIFLGFIVSSIGVSADPAEVQA--------------IIDWPEPNA 829
Query: 780 -YLLSSVH*-GILYNRGLNYRLT----------EEKFVWSREATKAFVELKKRMVEASVM 923
+ + S H Y R + T + +F W++EA KAF +KKRM +A +M
Sbjct: 830 IHDVKSFHRLATFYRRSIKGFSTIMAPITECMKKGEFRWTQEAAKAFKLVKKRMTKAPIM 889
Query: 924 HLLDFSKVFKVACDALEIDI-GVLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMIQSL- 1097
HL FSKVF+V CDA + I GVLSQ+ HPVAYF+EKLN+A+ RY YD E ++Q+L
Sbjct: 890 HLPSFSKVFEVECDASGVGIGGVLSQDRHPVAYFSEKLNEAKQRYSTYDKELYAVVQALC 949
Query: 1098 YG*HYLLP*E 1127
Y HYLLP E
Sbjct: 950 YWRHYLLPQE 959
Score = 123 bits (308), Expect(4) = e-141
Identities = 67/118 (56%), Positives = 81/118 (68%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF DVF +DL + LPPLRD+QH ID V G SLPNL +Y RQV++LL KGF
Sbjct: 601 EFRDVFPEDLPDHLPPLRDIQHAIDFVPGASLPNLPYY-----------RQVDDLLHKGF 649
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
+RES+SPC VPALL+ KK+G RMC+D +I KY FPIPRL+DMLDM+ A F
Sbjct: 650 IRESLSPCAVPALLTPKKDGSWRMCMDSRAFNRITGKYHFPIPRLDDMLDMMVDATIF 707
Score = 58.9 bits (141), Expect(4) = e-141
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMG 1922
DAS+VA +FF+ +VKL+GL K+IV D DV+FT +F + LWHKMG
Sbjct: 1192 DASKVAILFFNKIVKLYGLPKTIVSDRDVRFTRHFWRTLWHKMG 1235
Score = 70.1 bits (170), Expect = 2e-08
Identities = 60/177 (33%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTKIVFMNGWSCSLD*PMFRARSCE**NKYCTLL 513
+FSKIDLKSG HQI IR + + FM + +L M + R
Sbjct: 706 IFSKIDLKSGYHQIRIRPVMPF-GLSNVPSTFMRVMTQTLRPFMGKFRVV---------- 754
Query: 514 *ESF**SALIFSST----FNLVSNTWTICEQSLLY*ERAICKSKKCTFFT-TQXXXXXXX 678
+ LI+S + + ++ ++ + LY KKC+FFT T
Sbjct: 755 ---YFDDILIYSKSKEQHLDHLTQVYSTFRATNLY-----ANVKKCSFFTNTVIFLGFIV 806
Query: 679 XXXXXXXDPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD*LKK 849
DP +++AI +W EP I DV+ FH LATFY R IKGF TI+A IT+ +KK
Sbjct: 807 SSIGVSADPAEVQAIIDWPEPNAIHDVKSFHRLATFYRRSIKGFSTIMAPITECMKK 863
>ref|XP_018501913.1| PREDICTED: uncharacterized protein LOC108866951, partial [Pyrus x
bretschneideri]
Length = 1259
Score = 172 bits (437), Expect(7) = e-139
Identities = 90/225 (40%), Positives = 142/225 (63%), Gaps = 5/225 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQ---CNFVL 1299
VI++DH++L Y+ Q KLN + + WVEF++ + + +++K N ADAL++ +L
Sbjct: 885 VIHTDHESLKYLKGQSKLNRRHAKWVEFMESFPYVIKYKKGQVNVVADALSRRYALISML 944
Query: 1300 NKKTAGFE*I-NEYESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
N + GFE + ++Y + F+ + + G DG+ +H+G+LF ++CI SL E
Sbjct: 945 NARLMGFEQVKDQYANDSYFANVVTECAKGAC---DGFFMHEGYLFKMGRMCIPSGSLRE 1001
Query: 1477 FLVWELHAGGLTGHFGNENTI*V-EYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGLY 1653
LV E H GGL+GHFG + T + + + WP + RDV K + +C +C+ AK +++ GLY
Sbjct: 1002 LLVREAHGGGLSGHFGEKKTCELLKEHFFWPSMLRDVHKVIERCAICKKAKGKENAYGLY 1061
Query: 1654 TPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
PLP+P+ P D++MDFVLG P+T R DS + VVD FSKM+HF+
Sbjct: 1062 MPLPIPEQPWMDVSMDFVLGLPRTQRGKDSIMVVVDRFSKMSHFI 1106
Score = 138 bits (347), Expect(7) = e-139
Identities = 73/118 (61%), Positives = 87/118 (73%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF DVF D+L + LPP+R ++H IDLV G SLPN YR NP E E++RQV EL+EKG+
Sbjct: 495 EFKDVFPDELPKGLPPIRGIEHQIDLVPGASLPNRPAYRCNPAEAKEIQRQVGELVEKGY 554
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
VRES+SPC VP LL KK+G RMC+D KI VKYRFPIPRL+D+LD L GAA F
Sbjct: 555 VRESLSPCSVPTLLVPKKDGTMRMCMDSRAINKITVKYRFPIPRLDDLLDELHGAALF 612
Score = 90.1 bits (222), Expect(7) = e-139
Identities = 45/80 (56%), Positives = 60/80 (75%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DA VA +FF ++V+LHG+ KSIV D D KF SYF K LW K+GTKL FSTA HP TD Q
Sbjct: 1113 DAVHVADLFFQEIVRLHGVPKSIVSDRDTKFLSYFWKTLWRKLGTKLLFSTACHPQTDRQ 1172
Query: 1971 TDVMN*SL*NLLRAPMGEHI 2030
T+V+N +L ++LRA + +++
Sbjct: 1173 TEVVNRTLSSMLRAVIHKNL 1192
Score = 88.2 bits (217), Expect(7) = e-139
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = +3
Query: 849 KFVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFN 1025
+F WS +A KAF +K+++ A V+ L DF+K F++ CDA + IG VL QE P+A+F+
Sbjct: 789 EFRWSADAQKAFELIKEKLCSAPVLALPDFAKTFEIECDASGVGIGAVLMQEKRPIAFFS 848
Query: 1026 EKLNDARLRYEMYDNEF*TMIQSL-YG*HYLLP*E 1127
EKLN ARL Y +YD EF +I++L HYLLP E
Sbjct: 849 EKLNGARLNYSIYDKEFYALIRALEVWQHYLLPKE 883
Score = 85.9 bits (211), Expect(7) = e-139
Identities = 67/180 (37%), Positives = 88/180 (48%), Gaps = 8/180 (4%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK------IVFMNGWSCSLD*PMFRARSCE**N 495
LFSK+DL SG HQI ++ GDEWKT FKTK +V G S + F
Sbjct: 611 LFSKVDLMSGYHQIRMKEGDEWKTAFKTKQGLYEWMVMPFGLSNAPS--TFMRLMNHVLR 668
Query: 496 KYCTLL*ESF**SALIFSSTFN-LVSNTWTICEQSLLY*ERAICKSKKCTFFTTQXXXXX 672
KY L + L++S TF+ V + + E L + K KC F
Sbjct: 669 KYIGLFVVVYFDDILVYSKTFDDHVKHLRVVFET--LRDSKLYGKLTKCYFCKESVVFLG 726
Query: 673 XXXXXXXXX-DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD*LKK 849
D KI AI +W +P +I +VR FHGLA+FY RF+K F +IVA +T+ LKK
Sbjct: 727 YIISSKGVKVDEAKIEAIRDWPKPASIANVRSFHGLASFYRRFVKDFSSIVAPMTECLKK 786
Score = 33.9 bits (76), Expect(7) = e-139
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQ 2229
SV+ T SP+E+V+G+ P IDL+ + +TS + A + +L++Q
Sbjct: 1209 SVHGATKFSPFEVVYGFNPCVPIDLVHIPIDERTSTDGIRKAELMKKLHEQ 1259
Score = 25.0 bits (53), Expect(7) = e-139
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 2036 WDLKLSIIEFAYNNLLIG 2089
WD L I+EFAYN + G
Sbjct: 1195 WDTCLPIVEFAYNRSVHG 1212
>gb|OTG20186.1| putative reverse transcriptase domain-containing protein [Helianthus
annuus]
Length = 1465
Score = 169 bits (429), Expect(5) = e-136
Identities = 92/231 (39%), Positives = 144/231 (62%), Gaps = 5/231 (2%)
Frame = +1
Query: 1111 IYCRKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQ-C 1287
++ ++ V+++DH +L +I +Q K++ + W+ FL+ +TF ++HK V N+ ADAL++
Sbjct: 947 LFHKEFVLFTDHDSLRHIRTQDKVSHKHGRWLAFLEKFTFVVKHKTGVSNRVADALSRRS 1006
Query: 1288 NFVLNKKT--AGFE*INEYESC-PDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL 1458
N +++ + G E I E + P FS I ++ G + ++LHDGFLF G +LCI
Sbjct: 1007 NLLISMRVDVPGLEVIREQLAIDPYFSVILQDVESG---QKSDFLLHDGFLFKGNQLCIP 1063
Query: 1459 *TSLHEFLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RK 1635
+SL ++ ELH GH G + T+ V+ Y WP ++++V +Y+ +C VCQ++K
Sbjct: 1064 DSSLRLKIIKELHG---EGHVGRDRTLQLVQASYYWPTMRKEVDRYVKRCRVCQISKGTA 1120
Query: 1636 HNTGLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
N GLY PLP+P P DI+MDFVLG P+T R +DS VVD FSKM HF+
Sbjct: 1121 TNAGLYMPLPIPSQPWVDISMDFVLGLPRTQRGNDSIFVVVDRFSKMVHFI 1171
Score = 148 bits (374), Expect(5) = e-136
Identities = 78/118 (66%), Positives = 90/118 (76%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF+DVF +L + LPPLRD+QH IDL G LPN HYRM+P EH EL+RQVEEL+ KG
Sbjct: 564 EFSDVFPVELPDGLPPLRDIQHHIDLEPGSQLPNRPHYRMSPAEHEELRRQVEELISKGH 623
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
VRESMSPC VPALL+ KK+G RMCVD KI V+YRFPIPRL+D+LD LSGA F
Sbjct: 624 VRESMSPCAVPALLTPKKDGTWRMCVDSRAINKITVRYRFPIPRLDDLLDQLSGAIIF 681
Score = 125 bits (313), Expect(5) = e-136
Identities = 96/246 (39%), Positives = 138/246 (56%), Gaps = 13/246 (5%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*T 593
+ LYEW+VM FGL+N PSTFM VM Q+L PFIGKF+VV FD I IY S H+ H+
Sbjct: 708 REGLYEWLVMPFGLSNAPSTFMRVMNQLLRPFIGKFVVVYFDDILIYSASFSDHVVHVRQ 767
Query: 594 VFAVLRKS--YM*IQKVYFLHNTSLVSLICSLCWSIC*PRKD*SD*RVA*TQEY----L* 755
V A+LR+ Y +K F+ + L + I + +VA Q +
Sbjct: 768 VLALLRRDRFYAATKKCVFM-----TPKVLFLGYVISGDGIQVDESKVAAVQNWPTPTTI 822
Query: 756 CEVFSWTSYLLSSVH*GILYNRGLNYRLTE----EKFVWSREATKAFVELKKRMVEASVM 923
EV S+ L S I + + +T+ + FVW+ EA AF +K+++ A ++
Sbjct: 823 TEVRSFHG-LDSFYRRFIPHFSSIMAPVTDCMKGKTFVWTDEAELAFQVVKEKLTTAPIL 881
Query: 924 HLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMIQSL- 1097
L +FS+VF++ DA ++ IG VLSQ G PVAYF+EKL +LRY YD EF ++Q++
Sbjct: 882 VLPNFSQVFELHTDASKVGIGGVLSQGGRPVAYFSEKLTGPKLRYSTYDLEFYAVVQAVK 941
Query: 1098 YG*HYL 1115
+ HYL
Sbjct: 942 HWRHYL 947
Score = 90.5 bits (223), Expect(5) = e-136
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DA VA++FF DV +LHGL SIV D D +F S+F + LW + T+L FS+A+HP TDGQ
Sbjct: 1178 DAVNVAQLFFRDVYRLHGLPSSIVSDRDTRFLSHFWRSLWKMVNTQLNFSSAYHPQTDGQ 1237
Query: 1971 TDVMN*SL*NLLRAPMGEHI 2030
T+V+N SL NLLR +G+H+
Sbjct: 1238 TEVVNRSLGNLLRCLVGDHV 1257
Score = 49.7 bits (117), Expect(5) = e-136
Identities = 32/142 (22%), Positives = 64/142 (45%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
+VNR+TG SP++IV+ +PR +DL+ + + F +HE++ + + + N
Sbjct: 1274 AVNRSTGYSPFQIVYSSQPRGPLDLMSLPVSGSVPKKVQDFVEGLHEVHNAVYDHLTRAN 1333
Query: 2257 VDYKLRS*Y*EKS*NF*YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTINDNVYIV 2436
+ YK + + F + ++ ++ A P +++ IN N Y +
Sbjct: 1334 LKYKQAADQKRRHVEFEEGDFVWAVLTKDRFTVGEYNKLSAKKIGPVEIVEKINPNAYRL 1393
Query: 2437 DVSKDFGISFTFNVENLATYNG 2502
+ + FNV++L Y G
Sbjct: 1394 KLPSHIRCADVFNVKHLLPYYG 1415
Score = 77.0 bits (188), Expect = 2e-10
Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK------IVFMNGWSCSLD*PMFRARSCE**N 495
+F+K+DLKSG +QI +R GDEWKT FKT+ +V G S + F +
Sbjct: 680 IFTKLDLKSGYYQIRLRPGDEWKTAFKTREGLYEWLVMPFGLSNAPS--TFMRVMNQLLR 737
Query: 496 KYCTLL*ESF**SALIFSSTF--NLVSNTWTICEQSLLY*ERAICKSKKCTFFTTQ-XXX 666
+ + LI+S++F ++V + +LL +R +KKC F T +
Sbjct: 738 PFIGKFVVVYFDDILIYSASFSDHVVHVRQVL---ALLRRDRFYAATKKCVFMTPKVLFL 794
Query: 667 XXXXXXXXXXXDPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD*LK 846
D K+ A+ W P I +VR FHGL +FY RFI F +I+A +TD +K
Sbjct: 795 GYVISGDGIQVDESKVAAVQNWPTPTTITEVRSFHGLDSFYRRFIPHFSSIMAPVTDCMK 854
>ref|XP_016727823.1| PREDICTED: uncharacterized protein LOC107939043 [Gossypium hirsutum]
Length = 2445
Score = 168 bits (425), Expect(6) = e-136
Identities = 94/226 (41%), Positives = 137/226 (60%), Gaps = 6/226 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNFVL--- 1299
VI+SDH+AL +I Q KLN + + WVE+L+ + + +++K +N ADAL++ +L
Sbjct: 1051 VIHSDHEALKFIKGQHKLNKRHAKWVEYLESFPYVIKYKKGKENVVADALSRRYTLLTTL 1110
Query: 1300 NKKTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
+ K GF + E Y + DF IY ++G + + ++GFLF +LCI S+ E
Sbjct: 1111 DSKLLGFYHMKELYANDEDFGNIYAACENG---SFEKFFRYEGFLFKENRLCIPQGSIRE 1167
Query: 1477 FLVWELHAGGLTGHFGNENTI*V--EYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGL 1650
LV E H+GGL GHFG T+ E+ Y WP ++RDV + +C +C+ AK + GL
Sbjct: 1168 LLVLEAHSGGLMGHFGISKTLSTLHEHFY-WPRMRRDVERICERCLICKRAKSKVQPHGL 1226
Query: 1651 YTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
YTPLP+P P D++MDF+LG PKT DS VVD FSKM+HF+
Sbjct: 1227 YTPLPIPDTPWTDVSMDFILGLPKTKTGKDSIFVVVDRFSKMSHFI 1272
Score = 133 bits (334), Expect(6) = e-136
Identities = 68/118 (57%), Positives = 85/118 (72%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF D+F D++ LPP+R ++H IDLV G +LPN YR NP E EL++Q+ ELL+KG+
Sbjct: 661 EFEDIFPDEIPSGLPPIRGIEHQIDLVPGAALPNRPAYRSNPEETKELQKQITELLDKGY 720
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
+RES+SPC VP LL KK+G RMCVD KI +KYR PIPRL+DMLD LSGA F
Sbjct: 721 IRESLSPCAVPVLLVPKKDGSWRMCVDCRAINKITIKYRHPIPRLDDMLDELSGAQIF 778
Score = 91.3 bits (225), Expect(6) = e-136
Identities = 68/189 (35%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTKIVFM----------NGWSCSLD*PMFRARSC 483
+F+KIDLKSG HQI +R GDEWKT FKTK+ N S + R+
Sbjct: 777 IFTKIDLKSGYHQIRMREGDEWKTAFKTKLGLYEWLVMPFGLTNAPSTFMRLMNHVLRAF 836
Query: 484 E**NKYCTLL*ESF**SALIFSSTFNL-VSNTWTICEQSLLY*ERAICKSKKCTFFTTQX 660
K+C + + L++S T V + + E L E KKC+F T +
Sbjct: 837 I--GKFCVVYFDDI----LVYSKTLEEHVPHLRAVLET--LRKEVLYANLKKCSFCTDKV 888
Query: 661 XXXXXXXXXXXXX-DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD 837
D EK++AI EW P NI VR FHGLA+FY RF+ F TI A +T
Sbjct: 889 VFLGYVVSANGLEVDQEKVQAIQEWPRPTNISQVRSFHGLASFYRRFVPNFSTIAAPLTS 948
Query: 838 *LKKSLSGH 864
+KK+ + H
Sbjct: 949 VIKKNSAFH 957
Score = 85.9 bits (211), Expect(6) = e-136
Identities = 43/82 (52%), Positives = 59/82 (71%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DA +A +FF ++V+LHGL ++IV D D KF S+F + LW K+GTKL FST HP TDGQ
Sbjct: 1279 DAVHIANLFFREIVRLHGLPRTIVSDRDTKFLSHFWRTLWGKLGTKLLFSTTCHPQTDGQ 1338
Query: 1971 TDVMN*SL*NLLRAPMGEHIGT 2036
T+V+N L LLRA + +++ T
Sbjct: 1339 TEVVNRVLSTLLRALVRKNLKT 1360
Score = 79.3 bits (194), Expect(6) = e-136
Identities = 43/94 (45%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Frame = +3
Query: 852 FVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNE 1028
F WS + ++F +K+ +V+A ++ L DF+K F++ CDA + IG VL+Q+G PVAYF+E
Sbjct: 956 FHWSEDQERSFNLIKECLVKAPLLSLPDFTKTFEIECDASGVGIGAVLTQDGRPVAYFSE 1015
Query: 1029 KLNDARLRYEMYDNEF*TMIQSL-YG*HYLLP*E 1127
KL+ A L Y +YD E +I+SL HYL P E
Sbjct: 1016 KLSGASLNYPVYDKEMYALIRSLETWQHYLRPKE 1049
Score = 46.2 bits (108), Expect(6) = e-136
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
SV+ T SP+E V+G+ P +DL+P A A + EL++++ I
Sbjct: 1375 SVHSATKFSPFETVYGFNPLTPLDLLPFPVDQFVHTDARKKAEFVKELHRKVRENIESRT 1434
Query: 2257 VDYKLRS*Y*EKS*NF----*YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTINDN 2424
Y R+ K F W ++ + F L PF V++ IN+N
Sbjct: 1435 EQYVQRANKGRKRVVFEPGDWVW-VHMRKERFPAQRRSKLL---PRGDGPFQVIERINEN 1490
Query: 2425 VYIVDVSKDFGISFTFNVENLATYN 2499
Y +D+ ++ +S +FNV +L ++
Sbjct: 1491 SYKLDLPGEYNVSASFNVSDLTPFD 1515
Score = 177 bits (448), Expect(4) = e-106
Identities = 139/468 (29%), Positives = 225/468 (48%), Gaps = 11/468 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNFVL--- 1299
VI+SDH+AL +I Q KLN + + WVE+L+ + + +++K +N ADAL++ +L
Sbjct: 1920 VIHSDHEALKFIKGQHKLNKRHAKWVEYLESFPYVIKYKKGKENVVADALSRRYTLLTTL 1979
Query: 1300 NKKTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
+ K GF + E Y + DF IY ++G + + ++GFLF +LCI S+ E
Sbjct: 1980 DSKLLGFYHMKELYANDEDFGNIYAACENG---SFEKFFRYEGFLFKENRLCIPQGSIRE 2036
Query: 1477 FLVWELHAGGLTGHFGNENTI*V--EYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGL 1650
LV E H+GGL GHFG T+ E+ Y WP ++RDV + +C +C+ AK + GL
Sbjct: 2037 LLVLEAHSGGLMGHFGISKTLSTLHEHFY-WPRMRRDVERICERCLICKRAKSKVQPHGL 2095
Query: 1651 YTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFLLMPLKLPRFSLTML 1830
YTPLP+ P D++MDF+LG PKT DS VVD FSKM+HF+
Sbjct: 2096 YTPLPILDTPWTDVSMDFILGLPKTKIGKDSMFVVVDRFSKMSHFI-------------- 2141
Query: 1831 *SCMVCPSRLCSIEMLNSLVISRRYFGTRWVPNLNFLPLSTHKLMDRRML*IEVFEICCE 2010
SC + +++ I++ +F R + L+ LP + D + L
Sbjct: 2142 -SC---------AKTDDAVHIAKLFF--REIVRLHGLPRTIVSDRDTKFL---------S 2180
Query: 2011 LLWANILG-LGS*IIYN*ICI**SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSES 2187
W + G LG+ ++++ C + T V+G+ P +D++P
Sbjct: 2181 HFWQTLWGKLGTKLLFSTPC-----HPQTDGQTEVTVYGFNPLTPLDILPFPVDQFVHTD 2235
Query: 2188 ALSFAPHIHELYKQISNMINENNVDYKLRS*Y*EKS*NF----*YW*LYDGSDPFGKVSL 2355
A A EL++++ I Y R+ K F W ++ + F
Sbjct: 2236 ARKKAEFFKELHRKVRENIESRTEQYVQRANKGRKRVVFELGDWVW-VHKRKERFPAQRR 2294
Query: 2356 WNLYEVHAHSAWPFNVLKTINDNVYIVDVSKDFGISFTFNVENLATYN 2499
L PF V++ IN+N Y +D+ ++ +S +FNV +L ++
Sbjct: 2295 SKLL---PRGDGPFQVIERINENSYKLDLPGEYNVSASFNVSDLTPFD 2339
Score = 125 bits (313), Expect(4) = e-106
Identities = 64/118 (54%), Positives = 82/118 (69%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF D+F D++ LPP+R ++H IDLV G +LPN YR NP E EL++Q+ ELL+KG+
Sbjct: 1530 EFEDIFLDEIPSGLPPIRGIEHQIDLVPGAALPNRPAYRSNPEETKELQKQITELLDKGY 1589
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
++ES+SPC V LL KK+G RMC D KI +KYR PIPRL+DMLD LSG F
Sbjct: 1590 IQESLSPCAVSVLLVPKKDGSWRMCADCRAINKITIKYRHPIPRLDDMLDELSGTQIF 1647
Score = 88.2 bits (217), Expect(4) = e-106
Identities = 67/189 (35%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTKI----------VFMNGWSCSLD*PMFRARSC 483
+F+KIDLKSG HQI +R GDEWKT FK K+ N S + R+
Sbjct: 1646 IFTKIDLKSGYHQILMREGDEWKTAFKMKLGLYEWLVMPFSLTNAPSTFMRLMNHVLRAF 1705
Query: 484 E**NKYCTLL*ESF**SALIFSSTFNL-VSNTWTICEQSLLY*ERAICKSKKCTFFTTQX 660
K+C + + L++S T V + + E L E KKC+F T +
Sbjct: 1706 I--GKFCVVYFDDI----LVYSKTLEEHVPHLRAVLET--LRKEVLYANLKKCSFCTDKV 1757
Query: 661 XXXXXXXXXXXXX-DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD 837
D EK++AI EW P NI VR FHGLA+FY RF+ F TI A +T
Sbjct: 1758 VFLGYVVSANGLEADQEKVQAIQEWPRPTNISQVRSFHGLASFYRRFVPNFSTIAAPLTS 1817
Query: 838 *LKKSLSGH 864
+KK+ + H
Sbjct: 1818 VIKKNSAFH 1826
Score = 68.9 bits (167), Expect(4) = e-106
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +3
Query: 852 FVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDI-GVLSQEGHPVAYFNE 1028
F WS + ++F +K+ +V+A ++ L DF+K F++ CDA + I VL+Q+G VAYF+
Sbjct: 1825 FHWSEDQERSFNLIKECLVKAPLLSLPDFTKTFEIECDASGVGIEAVLTQDGRSVAYFSG 1884
Query: 1029 KLNDARLRYEMYDNEF*TMIQSL-YG*HYLLP*E 1127
KL+ A L Y +Y+ E +I+SL HYL P E
Sbjct: 1885 KLSGASLNYLVYEKEMYALIRSLETWQHYLRPKE 1918
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gb|AAP52850.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2447
Score = 180 bits (456), Expect(6) = e-136
Identities = 98/231 (42%), Positives = 146/231 (63%), Gaps = 5/231 (2%)
Frame = +1
Query: 1111 IYCRKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCN 1290
++ ++ VI+SDH++L +I SQ KLN + + WVEF++ + + ++HK +N ADAL++
Sbjct: 1071 LWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRY 1130
Query: 1291 FVLNK---KTAGFE*I-NEYESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL 1458
+L + K G E I ++Y DF+++ KDG R + ++++DGF+F KLCI
Sbjct: 1131 TLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDG--RTWNKFVINDGFVFRANKLCIP 1188
Query: 1459 *TSLHEFLVWELHAGGLTGHFGNENTI*VEYC-YNWPCLKRDVAKYMGQCHVCQLAK*RK 1635
+S+ L+ E H GGL GHFG + T + + WP ++RDV +++ +C CQ AK R
Sbjct: 1189 ASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAKSRL 1248
Query: 1636 HNTGLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
H GLY PLPVP P +DI+MDFVLG P+T R DS VVD FSKM HF+
Sbjct: 1249 HPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFI 1299
Score = 127 bits (319), Expect(6) = e-136
Identities = 65/118 (55%), Positives = 84/118 (71%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
E++DVF ++ LPP+R ++H IDL+ G SLPN YR NP E E++RQV ELL+KG+
Sbjct: 687 EYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGY 746
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
VRES+SPC VP +L KK+G RMCVD I ++YR PIPRL+DMLD LSG+ F
Sbjct: 747 VRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSIVF 804
Score = 86.7 bits (213), Expect(6) = e-136
Identities = 42/80 (52%), Positives = 59/80 (73%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DAS +A +FF ++V+LHG+ +IV D D KF S+F + LW K+GTKL FST HP TDGQ
Sbjct: 1306 DASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQ 1365
Query: 1971 TDVMN*SL*NLLRAPMGEHI 2030
T+V+N +L +LRA + ++I
Sbjct: 1366 TEVVNRTLSTMLRAVLKKNI 1385
Score = 72.8 bits (177), Expect(6) = e-136
Identities = 59/185 (31%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK------IVFMNGWSCSLD*PMFRARSCE**N 495
+FSK+DL+SG HQI ++LGDEWKT FKTK +V G + + F E
Sbjct: 803 VFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPS--TFMRLMNEVLR 860
Query: 496 KYCTLL*ESF**SALIFSST----FNLVSNTWTICEQSLLY*ERAICKSKKCTFFTTQ-X 660
+ + LI+S + FN + + + L+ +KCTF T +
Sbjct: 861 PFIGKFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARLF-----GNLEKCTFCTDRVS 915
Query: 661 XXXXXXXXXXXXXDPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD* 840
D K+ AI W PK + VR F GLA FY RF++ F TI A +
Sbjct: 916 FLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVL 975
Query: 841 LKKSL 855
KK +
Sbjct: 976 TKKGV 980
Score = 72.8 bits (177), Expect(6) = e-136
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = +3
Query: 852 FVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNE 1028
F W AF LK ++ A ++ L DF+K F++ CDA I +G VL QEG PVAYF+E
Sbjct: 982 FTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSE 1041
Query: 1029 KLNDARLRYEMYDNEF*TMIQSL-YG*HYLLP*E 1127
KL+ L Y YD E ++++L HYL P E
Sbjct: 1042 KLSGPVLNYSTYDKELYALVRTLETWQHYLWPKE 1075
Score = 61.6 bits (148), Expect(6) = e-136
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
S++ TT P++IV+G PR IDL+P+ K + A A + +L++ I N
Sbjct: 1402 SLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMN 1461
Query: 2257 VDYKLRS*Y*EKS*NF*----YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTINDN 2424
YK + F W L+ + F + L + PF VL IN+N
Sbjct: 1462 AKYKFAGDKGRRELTFEPGDLVW-LHLRKERFPDLRKSKLMP---RADGPFKVLAKINEN 1517
Query: 2425 VYIVDVSKDFGISFTFNVENLATYNGHDFNLRN 2523
Y +D+ DFG+S TFNV +L Y G + L +
Sbjct: 1518 AYKIDLPADFGVSPTFNVADLKPYLGEEDELES 1550
Score = 93.2 bits (230), Expect(4) = 3e-52
Identities = 87/250 (34%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Frame = +3
Query: 426 LYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*TVFA 602
LYE+ VM FGLTN P+ FM +M +V ++ KF+VV D I +Y QS E H HL V
Sbjct: 1626 LYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVLG 1685
Query: 603 VLRKS--YM*IQKVYF-LHNTSLVSLICSLCWSIC*PRKD*SD*RVA*TQEYL*CEVFSW 773
LR+ Y + K F L + + S P A T V
Sbjct: 1686 KLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETV-----TAVTDWKQPKTVTQI 1740
Query: 774 TSYL-LSSVH*GILYN-----RGLNYRLT-EEKFVWSREATKAFVELKKRMVEASVMHLL 932
S+L L+ + + N R + L EEKFVWS + KAF LK+++V + V+ L
Sbjct: 1741 RSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILP 1800
Query: 933 DFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMIQSL-YG* 1106
D K F V CDA +G VL QEGH VAY + +L Y +D E ++ +L
Sbjct: 1801 DTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWR 1860
Query: 1107 HYLLP*ECHL 1136
HYL+ C +
Sbjct: 1861 HYLIGNRCEI 1870
Score = 92.4 bits (228), Expect(4) = 3e-52
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 36/255 (14%)
Frame = +1
Query: 1132 IYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQ---CNFV-- 1296
IY+DHK+L YI++Q LN ++ W+E ++DY + + N ADAL++ CN +
Sbjct: 1870 IYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKSHCNTLGV 1929
Query: 1297 --------------------------LNKKTAGFE*INEYE-SCPDFSEIYDQLKDGITR 1395
L K + I E + + PD + +K G
Sbjct: 1930 RGIPPELNQQMEALNLSIVSRGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQG--- 1986
Query: 1396 EVDGYILHD-GFLFLGCKLCIL*T-SLHEFLVWELHAGGLTGHFGNENT-I*VEYCYNWP 1566
+ G+I + G L+ ++C+ L + ++ E H + H G+ + ++ Y W
Sbjct: 1987 KAAGFIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWV 2046
Query: 1567 CLKRDVAKYMGQCHVCQLAK*RKHN-TGLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDS 1743
+KR++A+++ C VCQ K GL PL VP++ +I MDF+ G PKT +DS
Sbjct: 2047 SMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFITGLPKTQGGYDS 2106
Query: 1744 TLTVVDNFSKMTHFL 1788
VVD +K+ F+
Sbjct: 2107 IWVVVDRLTKVARFI 2121
Score = 69.7 bits (169), Expect(4) = 3e-52
Identities = 34/72 (47%), Positives = 53/72 (73%)
Frame = +3
Query: 1797 SEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQTD 1976
+++A+++F +V LHG+ K IV D + +FTS+F K L ++GT+L FSTA+HP TDGQT+
Sbjct: 2130 NKLAELYFARIVSLHGVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTE 2189
Query: 1977 VMN*SL*NLLRA 2012
+N L ++L A
Sbjct: 2190 RLNQILEDMLHA 2201
Score = 23.5 bits (49), Expect(4) = 3e-52
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 2015 YGRTYWDWDLKLSIIEFAYNN 2077
+G+T WD L EF+YNN
Sbjct: 2206 FGKT---WDKSLPYAEFSYNN 2223
Score = 79.3 bits (194), Expect = 4e-11
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCF-DIFIYIQSREQHLDHL*T 593
K LYEW+VM FGLTN PSTFM +M +VL PFIGKF+VV F DI IY +S +H +HL
Sbjct: 831 KFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKSMGEHFNHLRA 890
Query: 594 VFAVLR 611
VF LR
Sbjct: 891 VFNALR 896
>gb|OTG11107.1| putative reverse transcriptase domain-containing protein [Helianthus
annuus]
Length = 1465
Score = 169 bits (427), Expect(6) = e-136
Identities = 92/231 (39%), Positives = 144/231 (62%), Gaps = 5/231 (2%)
Frame = +1
Query: 1111 IYCRKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQ-C 1287
++ ++ V+++DH +L +I +Q K++ + W+ FL+ +TF ++HK V N+ ADAL++
Sbjct: 947 LFHKEFVLFTDHDSLRHIRTQDKVSHKHGRWLAFLEKFTFVVKHKTGVSNRVADALSRRS 1006
Query: 1288 NFVLNKKT--AGFE*INEYESC-PDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL 1458
N +++ + G E I E + P FS I ++ G + ++LHDGFLF G +LCI
Sbjct: 1007 NLLVSMRVDVPGLEVIREQLAIDPYFSVILQDVESG---QKSDFLLHDGFLFKGNQLCIP 1063
Query: 1459 *TSLHEFLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RK 1635
+SL ++ ELH GH G + T+ V+ Y WP ++++V +Y+ +C VCQ++K
Sbjct: 1064 DSSLRLKIIKELHG---EGHVGRDRTLQLVQASYYWPTMRKEVDRYVKRCRVCQVSKGTA 1120
Query: 1636 HNTGLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
N GLY PLP+P P DI+MDFVLG P+T R +DS VVD FSKM HF+
Sbjct: 1121 TNAGLYMPLPIPSQPWVDISMDFVLGLPRTQRGNDSIFVVVDRFSKMVHFI 1171
Score = 149 bits (377), Expect(6) = e-136
Identities = 81/122 (66%), Positives = 93/122 (76%), Gaps = 6/122 (4%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF+DVF +L + LPPLRD+QH IDL G LPN HYRM+P EH EL+RQVEEL+ KG
Sbjct: 564 EFSDVFPVELPDGLPPLRDIQHHIDLEPGSQLPNRPHYRMSPAEHEELRRQVEELISKGH 623
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASFFL 343
VRESMSPC VPALL+ KK+G RMCVD KI V+YRFPIPRL+D+LD LSG AS F
Sbjct: 624 VRESMSPCAVPALLTPKKDGTWRMCVDSRAINKITVRYRFPIPRLDDLLDQLSG-ASIFT 682
Query: 344 KL 349
KL
Sbjct: 683 KL 684
Score = 126 bits (316), Expect(6) = e-136
Identities = 96/246 (39%), Positives = 138/246 (56%), Gaps = 13/246 (5%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*T 593
+ LYEW+VM FGL+N PSTFM VM Q+L PFIGKF+VV FD I IY S H+ H+
Sbjct: 708 REGLYEWLVMPFGLSNAPSTFMRVMNQLLRPFIGKFVVVYFDDILIYSASFSDHVVHVRQ 767
Query: 594 VFAVLRKS--YM*IQKVYFLHNTSLVSLICSLCWSIC*PRKD*SD*RVA*TQEY----L* 755
V A+LR+ Y +K F+ + L + I + +VA Q +
Sbjct: 768 VLALLRRDRFYAATKKCVFM-----TPKVLFLGYVISGDGIQVDESKVAAVQNWPTPTTI 822
Query: 756 CEVFSWTSYLLSSVH*GILYNRGLNYRLTE----EKFVWSREATKAFVELKKRMVEASVM 923
EV S+ L S I + + +T+ + FVW+ EA AF +K+++ A ++
Sbjct: 823 TEVRSFHG-LASFYRRFIPHFSSIMAPVTDCMKGKTFVWTDEAELAFQVVKEKLTTAPIL 881
Query: 924 HLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMIQSL- 1097
L +FS+VF++ DA ++ IG VLSQ G PVAYF+EKL +LRY YD EF ++Q++
Sbjct: 882 VLPNFSQVFELHTDASKVGIGGVLSQGGRPVAYFSEKLTGPKLRYSTYDLEFYAVVQAVK 941
Query: 1098 YG*HYL 1115
+ HYL
Sbjct: 942 HWRHYL 947
Score = 90.5 bits (223), Expect(6) = e-136
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DA VA++FF DV +LHGL SIV D D +F S+F + LW + T+L FS+A+HP TDGQ
Sbjct: 1178 DAVNVAQLFFRDVYRLHGLPSSIVSDRDTRFLSHFWRSLWKMVNTQLNFSSAYHPQTDGQ 1237
Query: 1971 TDVMN*SL*NLLRAPMGEHI 2030
T+V+N SL NLLR +G+H+
Sbjct: 1238 TEVVNRSLGNLLRCLVGDHV 1257
Score = 44.7 bits (104), Expect(6) = e-136
Identities = 30/140 (21%), Positives = 61/140 (43%)
Frame = +1
Query: 2083 NRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENNVD 2262
NR+TG SP++IV+ +PR +DL+ + + F + E++ + + + N+
Sbjct: 1276 NRSTGYSPFQIVYSSQPRGPLDLMSLPVSGSVPKKVQDFVEGLREVHNAVYDHLTRANLK 1335
Query: 2263 YKLRS*Y*EKS*NF*YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTINDNVYIVDV 2442
YK + + F + ++ ++ A P +++ IN N Y + +
Sbjct: 1336 YKQAADQKRRHVEFEEGDFVWAVLTKDRFTVGEYNKLSAKKIGPVEIVEKINPNAYRLKL 1395
Query: 2443 SKDFGISFTFNVENLATYNG 2502
+ FNV++L Y G
Sbjct: 1396 PSHIRCADVFNVKHLLPYYG 1415
Score = 21.2 bits (43), Expect(6) = e-136
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 2036 WDLKLSIIEFAYNN 2077
WD KL EFA+N+
Sbjct: 1260 WDQKLCQAEFAHNH 1273
Score = 79.3 bits (194), Expect = 3e-11
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK------IVFMNGWSCSLD*PMFRARSCE**N 495
+F+K+DLKSG +QI +R GDEWKT FKT+ +V G S + F +
Sbjct: 680 IFTKLDLKSGYYQIRLRPGDEWKTAFKTREGLYEWLVMPFGLSNAPS--TFMRVMNQLLR 737
Query: 496 KYCTLL*ESF**SALIFSSTF--NLVSNTWTICEQSLLY*ERAICKSKKCTFFTTQ-XXX 666
+ + LI+S++F ++V + +LL +R +KKC F T +
Sbjct: 738 PFIGKFVVVYFDDILIYSASFSDHVVHVRQVL---ALLRRDRFYAATKKCVFMTPKVLFL 794
Query: 667 XXXXXXXXXXXDPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD*LK 846
D K+ A+ W P I +VR FHGLA+FY RFI F +I+A +TD +K
Sbjct: 795 GYVISGDGIQVDESKVAAVQNWPTPTTITEVRSFHGLASFYRRFIPHFSSIMAPVTDCMK 854
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 175 bits (444), Expect(6) = e-135
Identities = 98/231 (42%), Positives = 144/231 (62%), Gaps = 5/231 (2%)
Frame = +1
Query: 1111 IYCRKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCN 1290
++ ++ VI+SDH++L +I SQ KLN + + WVEF++ + + ++HK +N ADAL++
Sbjct: 1074 LWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRY 1133
Query: 1291 FVLNK---KTAGFE*I-NEYESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL 1458
+LN+ K G E I ++Y DF ++ KDG + + YI+ DGF+F KLCI
Sbjct: 1134 TLLNQLDYKIFGLETIKDQYVHDADFKDVLLHCKDG--KGWNKYIVSDGFVFRANKLCIP 1191
Query: 1459 *TSLHEFLVWELHAGGLTGHFGNENTI*V-EYCYNWPCLKRDVAKYMGQCHVCQLAK*RK 1635
+S+ L+ E H GGL GHFG + T + + WP ++RDV + + +C CQ AK R
Sbjct: 1192 ASSVRLLLLQEAHGGGLMGHFGAKKTEDILAGHFFWPKMRRDVVRLVARCTTCQKAKSRL 1251
Query: 1636 HNTGLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
+ GLY PLPVP P +DI+MDFVLG P+T + DS VVD FSKM HF+
Sbjct: 1252 NPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKGRDSVFVVVDRFSKMAHFI 1302
Score = 132 bits (333), Expect(6) = e-135
Identities = 67/118 (56%), Positives = 86/118 (72%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
E++DVF ++ E LPP+R ++H IDL+ G SLPN YR NP E E++RQV+ELL+KG+
Sbjct: 690 EYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGY 749
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
VRES+SPC VP +L KK+G RMCVD I ++YR PIPRL+DMLD LSGA F
Sbjct: 750 VRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGAIVF 807
Score = 85.5 bits (210), Expect(6) = e-135
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DA+ +A +FF ++V+LHG+ +IV D D KF S+F + LW K+GTKL FST HP TDGQ
Sbjct: 1309 DATHIADLFFREIVRLHGVPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQ 1368
Query: 1971 TDVMN*SL*NLLRAPMGEHI 2030
T+V+N +L +LRA + ++I
Sbjct: 1369 TEVVNRTLSTMLRAVLKKNI 1388
Score = 72.8 bits (177), Expect(6) = e-135
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +3
Query: 852 FVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNE 1028
F W + AF LK ++ A ++ L DF+K F++ CDA I +G VL QEG PVAYF+E
Sbjct: 985 FSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSE 1044
Query: 1029 KLNDARLRYEMYDNEF*TMIQSL-YG*HYLLP*E 1127
KL+ + L Y YD E ++++L HYL P E
Sbjct: 1045 KLSGSVLNYSTYDKELYALVRTLETWQHYLWPKE 1078
Score = 68.9 bits (167), Expect(6) = e-135
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
S++ TT P++IV+G PR IDL+P+ K + A A + +L++ I N
Sbjct: 1405 SLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIERMN 1464
Query: 2257 VDYKLRS*Y*EKS*NF*----YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTINDN 2424
YK S K NF W L+ + F ++ L + PF VL+ INDN
Sbjct: 1465 ARYKFASDKGRKEINFEPGDLVW-LHLRKERFPELRKSKLLP---RADGPFKVLEKINDN 1520
Query: 2425 VYIVDVSKDFGISFTFNVENLATYNGHDFNLRN 2523
Y +D+ DFG+S TFN+ +L Y G + L +
Sbjct: 1521 AYRLDLPADFGVSPTFNIADLKPYLGEEVELES 1553
Score = 63.9 bits (154), Expect(6) = e-135
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEW----KTIFKTKIVFMNGWSCSLD*PMFRARSCE**NKY 501
+FSK+DL+SG HQI ++LGDEW KT F + + + F E +
Sbjct: 806 VFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAF 865
Query: 502 CTLL*ESF**SALIFSSTFNLVSNTWTICEQSLLY*ERAICKSKKCTFFTTQXXXXXXXX 681
+ LI+S + + + +L R +KCTF T +
Sbjct: 866 IGKFVVVYFDDILIYSKSMDEHVDHMRAVFNALRD-ARLFGNLEKCTFCTDRVSFLGYVV 924
Query: 682 XXXXXX-DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD*LKKSL 855
D K+ AI+ W PK I VR F GLA FY RF+K F TI A + + KK +
Sbjct: 925 TPQGIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGV 983
Score = 79.3 bits (194), Expect = 3e-11
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCF-DIFIYIQSREQHLDHL*T 593
K LYEW+VM FGLTN PSTFM +M +VL FIGKF+VV F DI IY +S ++H+DH+
Sbjct: 834 KFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIYSKSMDEHVDHMRA 893
Query: 594 VFAVLR 611
VF LR
Sbjct: 894 VFNALR 899
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 175 bits (443), Expect(6) = e-133
Identities = 95/231 (41%), Positives = 140/231 (60%), Gaps = 5/231 (2%)
Frame = +1
Query: 1111 IYCRKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCN 1290
++ ++ VI++DH++L ++ Q+KLN + + WVEF++ + + +++K DN ADAL++
Sbjct: 1263 LWPKEFVIHTDHESLKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRY 1322
Query: 1291 FVLNK---KTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL 1458
+L+ K GFE I Y + DF +IY + + Y HDGFLF +LCI
Sbjct: 1323 VLLSSLDAKLLGFEHIKSLYANDSDFEKIYSSCEKFAFGK---YYRHDGFLFYDNRLCIP 1379
Query: 1459 *TSLHEFLVWELHAGGLTGHFGNENTI*V-EYCYNWPCLKRDVAKYMGQCHVCQLAK*RK 1635
+SL E + E H GGL GHFG TI V + ++WP +KRDV + +C C+ AK +
Sbjct: 1380 NSSLRELFIREAHGGGLMGHFGVSKTIKVMQDHFHWPHMKRDVERICERCPTCKQAKAKS 1439
Query: 1636 HNTGLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
GLYTPLP+P +P DI+MDFV+G P+T DS VVD FSKM HF+
Sbjct: 1440 QPHGLYTPLPIPSHPWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFI 1490
Score = 122 bits (307), Expect(6) = e-133
Identities = 65/118 (55%), Positives = 81/118 (68%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
++ DVF ++ LPP+R ++H ID V G SLPN YR NP E EL++QV EL+E+G
Sbjct: 879 DYTDVFPEENPVGLPPIRGIEHQIDFVPGASLPNRPAYRTNPVETKELEKQVTELMERGH 938
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
+RESMSPC VP LL KK+G RMCVD I VKYR PIPRL+DMLD L G++ F
Sbjct: 939 IRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPRLDDMLDELHGSSIF 996
Score = 91.3 bits (225), Expect(6) = e-133
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DA +A +FF +VV+LHG+ K+IV D D KF SYF K LW K+GTKL FST HP TDGQ
Sbjct: 1497 DAIHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQ 1556
Query: 1971 TDVMN*SL*NLLRAPMGEHIGT 2036
T+V+N +L LLRA + +++ T
Sbjct: 1557 TEVVNRTLSTLLRALIKKNLKT 1578
Score = 77.8 bits (190), Expect(6) = e-133
Identities = 60/184 (32%), Positives = 88/184 (47%), Gaps = 10/184 (5%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTKIVFMNGWSCSLD*PMFRARSCE**NKYCTLL 513
+FSK+DLKSG HQI ++ GDEW KT + G L P + + +
Sbjct: 995 IFSKVDLKSGYHQIRMKEGDEW----KTAFKTIQGLYEWLVMPFGLTNAPSTFMRLMNHV 1050
Query: 514 *ESF**--------SALIFSSTFNL-VSNTWTICEQSLLY*ERAICKSKKCTFFTTQXXX 666
+F L++S + V + + E +L E+ KKCTF T
Sbjct: 1051 LRAFIGRFVIVYFDDILVYSKSLEEHVEHLKMVLE--VLRKEKLYANLKKCTFGTDNLVF 1108
Query: 667 XXXXXXXXXXX-DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD*L 843
D EK++AI EW PK++ +VR FHGLA FY RF+K F T+ A +T+ +
Sbjct: 1109 LGFVVSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVI 1168
Query: 844 KKSL 855
KK++
Sbjct: 1169 KKNV 1172
Score = 75.5 bits (184), Expect(6) = e-133
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = +3
Query: 852 FVWSREATKAFVELKKRMVEASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNE 1028
F W + AF LK+++ A V+ L DF K F++ CDA + IG VL Q+ P+AYF+E
Sbjct: 1174 FKWEQAQEDAFQALKEKLTHAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFSE 1233
Query: 1029 KLNDARLRYEMYDNEF*TMIQSLY-G*HYLLP*E 1127
KL A L Y YD E ++++L G HYL P E
Sbjct: 1234 KLGGATLNYPTYDKELYALVRALQTGQHYLWPKE 1267
Score = 52.0 bits (123), Expect(6) = e-133
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Frame = +1
Query: 2077 SVNRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENN 2256
S++ + SP++IV+G+ P +DL+P+ + S A + ++++Q I E
Sbjct: 1593 SMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQAKKNIEEKT 1652
Query: 2257 VDYKLRS*Y*EKS*NF----*YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTINDN 2424
Y + K F W ++ + F K L + PF VLK IN+N
Sbjct: 1653 KQYAKHANKSRKEVIFNEGDLVW-IHLRKERFPKERKSKLM---SRIDGPFKVLKRINNN 1708
Query: 2425 VYIVDVSKDFGISFTFNVENLATYNGHDFNLR-NPF----DDV 2538
Y +D+ + +S +FNV +L + + +LR NPF DDV
Sbjct: 1709 AYSLDLQGKYNVSNSFNVADLFPFIADNTDLRSNPFQLGEDDV 1751
>gb|PKU61488.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 1048
Score = 182 bits (462), Expect(5) = e-133
Identities = 98/225 (43%), Positives = 142/225 (63%), Gaps = 5/225 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNF---VL 1299
+++SDH+AL Y+ SQ KL ++ + WVE + Y F L++KA N ADAL++ + VL
Sbjct: 766 ILFSDHEALRYLQSQNKLKSRHASWVESIAAYHFVLKYKAGQHNTVADALSRRHLLLQVL 825
Query: 1300 NKKTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
K GFE + E Y++ DF I+ + + G + + + +G+LF G +LCI SL
Sbjct: 826 QSKVVGFEVLKELYKNDADFQNIWTRCQTGPHQL---FHMKEGYLFRGNQLCIPQNSLRL 882
Query: 1477 FLVWELHAGGLTGHFGNENTI*V-EYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGLY 1653
L+ E HAGGL GHFG + T+ + + WP +KRDV +Y+ C VC++AK + N GLY
Sbjct: 883 ELLTECHAGGLAGHFGRDKTLSMLAENFFWPTMKRDVERYLRSCRVCRIAKTQGTNAGLY 942
Query: 1654 TPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
PLPVP+ P D+++DFVLG P+T R DS + VVD FSKM HF+
Sbjct: 943 MPLPVPEAPWLDVSIDFVLGLPRTQRNKDSIMVVVDRFSKMVHFV 987
Score = 139 bits (351), Expect(5) = e-133
Identities = 98/248 (39%), Positives = 141/248 (56%), Gaps = 11/248 (4%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*T 593
++ LYEW VM FGL+N PSTFM +M V PF+ +F+VV FD I IY ++E+HL HL
Sbjct: 521 RDGLYEWTVMPFGLSNAPSTFMRLMNHVFQPFLCQFVVVYFDDILIYSGNQEEHLQHLHQ 580
Query: 594 VFAVLR--KSYM*IQKVYFL-HNTSLVSLICSLCWSIC*PRKD*SD*RVA*TQEYL*CEV 764
VF VLR K ++ + K FL S + + S P K + Q +
Sbjct: 581 VFMVLRAQKLFINLPKCQFLVSRISFLGYVISDTGIEADPNKIEAIVNWPVPQSFTDVRR 640
Query: 765 FSWTSYLLSSVH*GILYNRG-----LNYRLTEEKFVWSREATKAFVELKKRMVEASVMHL 929
F + L+S + + N + L E+F W+ A +F LK+ + EA V+ L
Sbjct: 641 F----HGLASFYRRFIRNFSTVAAPITEVLRGEQFAWNNAAQTSFELLKRVIAEAPVLAL 696
Query: 930 LDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMIQSL-YG 1103
+F++VF+V CDA + IG VLSQ GHP+A+F+EKLND+R +Y YD EF ++++L +
Sbjct: 697 PNFNQVFEVECDASNVGIGAVLSQGGHPLAFFSEKLNDSRQKYSTYDKEFYAVVRALHHW 756
Query: 1104 *HYLLP*E 1127
HYLLP E
Sbjct: 757 SHYLLPSE 764
Score = 135 bits (340), Expect(5) = e-133
Identities = 67/118 (56%), Positives = 84/118 (71%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF D+ +D++ LPP R+VQH IDL+ G ++PN HYR+ P EH ELKRQ+E L+ KG
Sbjct: 377 EFRDIITDEIPAGLPPQREVQHAIDLIPGATIPNRPHYRLRPDEHEELKRQIEGLMSKGL 436
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
VR S+SPC VPALL KK+G RMC+D KI +KYRFPIPRL+D+ D L GA F
Sbjct: 437 VRPSVSPCAVPALLVPKKDGTYRMCIDSRAVNKITIKYRFPIPRLDDIFDQLHGAKLF 494
Score = 65.1 bits (157), Expect(5) = e-133
Identities = 27/56 (48%), Positives = 42/56 (75%)
Frame = +3
Query: 1788 VDASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP 1955
+DA+ +A ++F ++V+LHG+ ++I D DVKF S+F K LW K+GT+L FS+ HP
Sbjct: 993 LDATHIADLYFREIVRLHGIPRTITSDRDVKFLSHFWKTLWSKLGTRLHFSSTAHP 1048
Score = 50.1 bits (118), Expect(5) = e-133
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK 420
LFSKIDL+SG HQI +R GDEWKT FKT+
Sbjct: 493 LFSKIDLRSGYHQIRMRPGDEWKTAFKTR 521
Score = 45.8 bits (107), Expect(2) = 4e-08
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +1
Query: 700 DPEKIRAINEWLEPKNICDVRCFHGLATFYHRFI 801
DP KI AI W P++ DVR FHGLA+FY RFI
Sbjct: 75 DPIKIEAIVNWPVPQSFTDVRRFHGLASFYRRFI 108
Score = 43.1 bits (100), Expect(2) = 4e-08
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +3
Query: 489 MKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*TVFAVLR--KSYM*IQKVYFL 647
M V PF+ +F+VV FD I IY ++E+HL HL VF VLR K ++ + K FL
Sbjct: 1 MNHVFQPFLCQFVVVYFDDILIYSGNQEEHLQHLHQVFIVLRAQKLFINLPKCQFL 56
>gb|OTG11106.1| putative reverse transcriptase domain-containing protein [Helianthus
annuus]
Length = 1230
Score = 166 bits (421), Expect(6) = e-133
Identities = 91/231 (39%), Positives = 144/231 (62%), Gaps = 5/231 (2%)
Frame = +1
Query: 1111 IYCRKNVIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQ-C 1287
++ ++ V+++DH +L +I +Q K++ + W+ FL+ +TF ++HK V N+ ADAL++
Sbjct: 712 LFHKEFVLFTDHDSLRHIRTQDKVSHKHGRWLAFLEKFTFVVKHKTGVSNRVADALSRRS 771
Query: 1288 NFVLNKKT--AGFE*INEYESC-PDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL 1458
N +++ + G E I E + P FS I ++ G + ++L+DGFLF G +LCI
Sbjct: 772 NLLVSMRVDVPGLEVIREQLAIDPYFSVILQDVESG---QKSDFLLYDGFLFKGNQLCIP 828
Query: 1459 *TSLHEFLVWELHAGGLTGHFGNENTI*-VEYCYNWPCLKRDVAKYMGQCHVCQLAK*RK 1635
+SL ++ ELH GH G + T+ V+ Y WP ++++V +Y+ +C VCQ++K
Sbjct: 829 DSSLRLKIIKELHG---EGHVGRDRTLQLVQASYYWPTMRKEVDRYVKRCRVCQVSKGTA 885
Query: 1636 HNTGLYTPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
N GLY PLP+P P DI+MDFVLG P+T R +DS VVD FSKM HF+
Sbjct: 886 TNAGLYMPLPIPSQPWVDISMDFVLGLPRTQRGNDSIFVVVDRFSKMVHFI 936
Score = 149 bits (377), Expect(6) = e-133
Identities = 81/122 (66%), Positives = 93/122 (76%), Gaps = 6/122 (4%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF+DVF +L + LPPLRD+QH IDL G LPN HYRM+P EH EL+RQVEEL+ KG
Sbjct: 329 EFSDVFPVELPDGLPPLRDIQHHIDLEPGSQLPNRPHYRMSPAEHEELRRQVEELISKGH 388
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASFFL 343
VRESMSPC VPALL+ KK+G RMCVD KI V+YRFPIPRL+D+LD LSG AS F
Sbjct: 389 VRESMSPCAVPALLTPKKDGTWRMCVDSRAINKITVRYRFPIPRLDDLLDQLSG-ASIFT 447
Query: 344 KL 349
KL
Sbjct: 448 KL 449
Score = 125 bits (314), Expect(6) = e-133
Identities = 96/250 (38%), Positives = 137/250 (54%), Gaps = 17/250 (6%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCFD-IFIYIQSREQHLDHL*T 593
+ LYEW+VM FGL+N PSTFM VM Q+L PFIGKF+VV FD I IY S H+ H+
Sbjct: 473 REGLYEWLVMPFGLSNAPSTFMRVMNQLLRPFIGKFVVVYFDDILIYSASFSDHVVHVRQ 532
Query: 594 VFAVLRKS--YM*IQKVYFLHNTSLVSLICSLCWSIC*PRKD*SD*RVA*TQEYL*CEVF 767
V A+LR+ Y +K F+ + L + I + +VA Q +
Sbjct: 533 VLALLRRDRFYAATKKCVFM-----TPKVLFLGYVISGDGIQVDESKVAAVQNW----PT 583
Query: 768 SWTSYLLSSVH*GI--LYNRGLNYR----------LTEEKFVWSREATKAFVELKKRMVE 911
T L S H G+ Y R + + + + FVW+ EA AF +K+++
Sbjct: 584 PTTITELRSFH-GLASFYRRFIPHFSSIMAPVTDCMKGKMFVWTDEAELAFQVVKEKLTT 642
Query: 912 ASVMHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMI 1088
A ++ L +FS+VF++ DA ++ IG VLSQ G PVAYF+EKL +LRY YD EF ++
Sbjct: 643 APILVLPNFSQVFELHTDASKVGIGGVLSQGGRPVAYFSEKLTGPKLRYSTYDLEFYAVV 702
Query: 1089 QSL-YG*HYL 1115
Q++ + HYL
Sbjct: 703 QAVKHWRHYL 712
Score = 88.6 bits (218), Expect(6) = e-133
Identities = 43/80 (53%), Positives = 59/80 (73%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DA VA++FF DV +LHGL SIV D D +F S+F + LW + T+L FS+A+HP T+GQ
Sbjct: 943 DAVNVAQLFFRDVYRLHGLPSSIVSDRDTRFLSHFWRSLWKMVNTQLNFSSAYHPQTNGQ 1002
Query: 1971 TDVMN*SL*NLLRAPMGEHI 2030
T+V+N SL NLLR +G+H+
Sbjct: 1003 TEVVNRSLGNLLRCLVGDHV 1022
Score = 41.6 bits (96), Expect(6) = e-133
Identities = 29/140 (20%), Positives = 60/140 (42%)
Frame = +1
Query: 2083 NRTTGKSPYEIVFGYRPRQLIDLIPVSDHYKTSESALSFAPHIHELYKQISNMINENNVD 2262
NR+TG SP++IV+ +PR +DL+ + + F + E++ + + + N+
Sbjct: 1041 NRSTGYSPFQIVYSSQPRGPLDLMSLPVSGSVPKKVQDFVEGLCEVHNAVYDHLTRANLK 1100
Query: 2263 YKLRS*Y*EKS*NF*YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTINDNVYIVDV 2442
YK + + F + ++ ++ A P +++ N N Y + +
Sbjct: 1101 YKQAADQKRRHVEFEEGDFVWAVLTKDRFTVGEYNKLSAKKIGPVEIVEKTNPNAYRLKL 1160
Query: 2443 SKDFGISFTFNVENLATYNG 2502
+ FNV++L Y G
Sbjct: 1161 PSHIRCADVFNVKHLLPYYG 1180
Score = 21.2 bits (43), Expect(6) = e-133
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 2036 WDLKLSIIEFAYNN 2077
WD KL EFA+N+
Sbjct: 1025 WDQKLCQAEFAHNH 1038
Score = 78.2 bits (191), Expect = 7e-11
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK------IVFMNGWSCSLD*PMFRARSCE**N 495
+F+K+DLKSG +QI +R GDEWKT FKT+ +V G S + F +
Sbjct: 445 IFTKLDLKSGYYQIRLRPGDEWKTAFKTREGLYEWLVMPFGLSNAPS--TFMRVMNQLLR 502
Query: 496 KYCTLL*ESF**SALIFSSTF--NLVSNTWTICEQSLLY*ERAICKSKKCTFFTTQ-XXX 666
+ + LI+S++F ++V + +LL +R +KKC F T +
Sbjct: 503 PFIGKFVVVYFDDILIYSASFSDHVVHVRQVL---ALLRRDRFYAATKKCVFMTPKVLFL 559
Query: 667 XXXXXXXXXXXDPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD*LK 846
D K+ A+ W P I ++R FHGLA+FY RFI F +I+A +TD +K
Sbjct: 560 GYVISGDGIQVDESKVAAVQNWPTPTTITELRSFHGLASFYRRFIPHFSSIMAPVTDCMK 619
>gb|KYP78758.1| Transposon Ty3-I Gag-Pol polyprotein, partial [Cajanus cajan]
Length = 1060
Score = 170 bits (431), Expect(6) = e-133
Identities = 96/225 (42%), Positives = 132/225 (58%), Gaps = 5/225 (2%)
Frame = +1
Query: 1129 VIYSDHKALGYIYSQKKLNAQRSCWVEFLQDYTFTLRHKARVDNKAADALNQCNFVLN-- 1302
VI+SDH++L Y+ Q KLN + + WVE+L+ + + +++K N ADAL++ + +LN
Sbjct: 531 VIHSDHESLKYLKGQHKLNKRHAKWVEYLEQFPYVIKYKKGSTNVVADALSRRHVLLNTL 590
Query: 1303 -KKTAGFE*INE-YESCPDFSEIYDQLKDGITREVDGYILHDGFLFLGCKLCIL*TSLHE 1476
+ GF+ I E YE DF+ Y I + GY + +GFLF KLCI S+ +
Sbjct: 591 GSQILGFDDIKELYEKDLDFANFYSLC---IQKPYQGYYISEGFLFKENKLCIPQGSIRK 647
Query: 1477 FLVWELHAGGLTGHFGNENTI*V-EYCYNWPCLKRDVAKYMGQCHVCQLAK*RKHNTGLY 1653
LV E H GGL GHFG E T+ + + WP +KRDV ++ C C AK GLY
Sbjct: 648 LLVRESHEGGLMGHFGIEKTLSLLREKFFWPHMKRDVQRFCSSCIACLQAKSTTKPHGLY 707
Query: 1654 TPLPVPKYP*QDINMDFVLGFPKTTRKHDSTLTVVDNFSKMTHFL 1788
TPLP+ P DI+MDF+LG P+T R DS VVD FSKM HF+
Sbjct: 708 TPLPISSSPWVDISMDFILGLPRTQRGKDSIFVVVDRFSKMAHFI 752
Score = 126 bits (317), Expect(6) = e-133
Identities = 97/248 (39%), Positives = 135/248 (54%), Gaps = 14/248 (5%)
Frame = +3
Query: 417 KNSLYEWMVMFFGLTNVPSTFM*VMKQVLHPFIGKFLVVCF-DIFIYIQSREQHLDHL*T 593
K LYEW+VM FGLTN PSTFM +M L IGKF+VV F DI IY QS H+DHL
Sbjct: 285 KFGLYEWLVMPFGLTNAPSTFMRLMNHALRDCIGKFVVVYFDDILIYSQSLSDHVDHLRQ 344
Query: 594 VFAVLRKSYM--*IQKVYF-LHNTSLVSLICSLCWSIC*PRKD*SD*RVA*TQEY-L*CE 761
VF VLR +++ + K F + N + + S P K + QE+ +
Sbjct: 345 VFLVLRDNHLFANVDKCTFCVDNVIFLGFVVSKNGVHVDPEK------IKAIQEWPIPTN 398
Query: 762 VFSWTSYL-LSSVH*GILYN-----RGLNYRLTEE-KFVWSREATKAFVELKKRMVEASV 920
V S+ L+S + + N LN + ++ F W + AF +LK ++ +A V
Sbjct: 399 VSEVRSFHGLASFYRRFVPNFSTLASPLNELVKKDVVFEWKEKHNLAFQDLKHKLTQAPV 458
Query: 921 MHLLDFSKVFKVACDALEIDIG-VLSQEGHPVAYFNEKLNDARLRYEMYDNEF*TMIQSL 1097
+ L DFSK F++ CDA + IG VL Q GHP+AYF+EKL+ A L Y YD E ++++L
Sbjct: 459 LALPDFSKTFELECDASGLGIGAVLLQGGHPIAYFSEKLHGATLNYPTYDKELYALVRAL 518
Query: 1098 Y-G*HYLL 1118
HYL+
Sbjct: 519 QTWEHYLV 526
Score = 118 bits (296), Expect(6) = e-133
Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 6/118 (5%)
Frame = +2
Query: 2 EFADVFSDDLLEKLPPLRDVQHVIDLVSGVSLPNLLHYRMNPTEHAELKRQVEELLEKGF 181
EF D+F + LPP R ++H IDLV G SLPN YR NP E E+++QV+ELLEKG+
Sbjct: 141 EFDDIFPKEGPMGLPPFRGIEHQIDLVPGASLPNRPAYRTNPQETKEIEKQVQELLEKGW 200
Query: 182 VRESMSPCEVPALLSQKKNG-*RMCVD-----KIMVKYRFPIPRLNDMLDMLSGAASF 337
+++S+SPC VP +L KK+G RMC D I +KYR PIPRL+DMLD L G++ F
Sbjct: 201 IQKSLSPCAVPVILVPKKDGKWRMCCDCRAINNITIKYRHPIPRLDDMLDELHGSSIF 258
Score = 94.0 bits (232), Expect(6) = e-133
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = +3
Query: 1791 DASEVAKIFFDDVVKLHGLSKSIVFD*DVKFTSYF*KILWHKMGTKLKFSTAFHP*TDGQ 1970
DAS +AK+FF ++V+LHGL K+IV D DVKF S+F K LW ++GTKL FST HP TDGQ
Sbjct: 759 DASNIAKLFFQEIVRLHGLPKTIVSDRDVKFLSHFWKTLWARLGTKLLFSTTCHPQTDGQ 818
Query: 1971 TDVMN*SL*NLLRA 2012
T+V+N SL +LRA
Sbjct: 819 TEVVNRSLGTMLRA 832
Score = 62.0 bits (149), Expect(6) = e-133
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Frame = +1
Query: 2080 VNRTTGKSPYEIVFGYRPRQLIDLIPVSDH----YKTSESALSFAPHIHELYKQISNMIN 2247
V++TT SP+EIV+G+ P +DL+P+ D +K S F +HE +
Sbjct: 856 VHKTTNMSPFEIVYGFNPLTPLDLLPLPDVASFIHKEGTSRAEFVKKLHERVRDHIQSQT 915
Query: 2248 ENNVDY--KLRS*Y*EKS*NF*YW*LYDGSDPFGKVSLWNLYEVHAHSAWPFNVLKTIND 2421
E Y K R K ++ + L P + S ++ PF +L+ IN+
Sbjct: 916 EKYQKYNNKGRKEVIFKEGDWVWLHLRKDRFPSKRKS-----KLSPRGDGPFQILRKINN 970
Query: 2422 NVYIVDVSKDFGISFTFNVENLATYNG 2502
N Y++D+ ++G+S +FNV +L+ + G
Sbjct: 971 NAYVLDLPSEYGVSSSFNVSDLSLFTG 997
Score = 21.6 bits (44), Expect(6) = e-133
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 2036 WDLKLSIIEFAYNNLL 2083
WD L +EFAYN ++
Sbjct: 841 WDDYLPHVEFAYNRVV 856
Score = 85.9 bits (211), Expect = 3e-13
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Frame = +1
Query: 334 LFSKIDLKSGCHQIHIRLGDEWKTIFKTK----------IVFMNGWSCSLD*PMFRARSC 483
+FSK+DLKSG HQI I+ GDEWKT FKTK N S + R C
Sbjct: 257 IFSKVDLKSGYHQIRIKEGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNHALRDC 316
Query: 484 E**NKYCTLL*ESF**SALIFSSTFNLVSNTWTICEQSLLY*ERAICKSKKCTFFTTQ-X 660
K+ + + + S + + + + + L+ KCTF
Sbjct: 317 I--GKFVVVYFDDILIYSQSLSDHVDHLRQVFLVLRDNHLF-----ANVDKCTFCVDNVI 369
Query: 661 XXXXXXXXXXXXXDPEKIRAINEWLEPKNICDVRCFHGLATFYHRFIKGFCTIVASITD* 840
DPEKI+AI EW P N+ +VR FHGLA+FY RF+ F T+ + + +
Sbjct: 370 FLGFVVSKNGVHVDPEKIKAIQEWPIPTNVSEVRSFHGLASFYRRFVPNFSTLASPLNEL 429
Query: 841 LKKSL 855
+KK +
Sbjct: 430 VKKDV 434