BLASTX nr result

ID: Ophiopogon27_contig00003963 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00003963
         (519 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248968.1| UPF0235 protein C15orf40 homolog [Asparagus ...    62   3e-09
ref|XP_003580862.1| PREDICTED: UPF0235 protein C15orf40 homolog ...    55   2e-06

>ref|XP_020248968.1| UPF0235 protein C15orf40 homolog [Asparagus officinalis]
          Length = 125

 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 32/36 (88%), Positives = 35/36 (97%)
 Frame = -3

Query: 517 RQVSISSGSKSREKVVLVQEVSLENVFNALKKARDS 410
           RQVSISSGSKSREKVVL+QEVSLENV+NALKKA +S
Sbjct: 90  RQVSISSGSKSREKVVLIQEVSLENVYNALKKACNS 125


>ref|XP_003580862.1| PREDICTED: UPF0235 protein C15orf40 homolog [Brachypodium
           distachyon]
 gb|KQJ85414.1| hypothetical protein BRADI_5g26880v3 [Brachypodium distachyon]
          Length = 127

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 28/36 (77%), Positives = 32/36 (88%)
 Frame = -3

Query: 517 RQVSISSGSKSREKVVLVQEVSLENVFNALKKARDS 410
           R+VSI SGSKSREKVVLVQE +L+ VF+ALKKA DS
Sbjct: 91  REVSIGSGSKSREKVVLVQEATLQGVFDALKKACDS 126


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