BLASTX nr result

ID: Ophiopogon27_contig00003757 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00003757
         (449 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK69931.1| uncharacterized protein A4U43_C05F28350 [Asparagu...    82   3e-16
ref|XP_020266883.1| LOW QUALITY PROTEIN: protein SDE2 homolog [A...    82   1e-15
ref|XP_020275966.1| RING-H2 finger protein ATL66-like [Asparagus...    80   2e-15
ref|XP_020256975.1| RING-H2 finger protein ATL2-like [Asparagus ...    77   8e-14
ref|XP_020255210.1| RING-H2 finger protein ATL60-like [Asparagus...    75   3e-13
ref|XP_020276386.1| RING-H2 finger protein ATL48-like [Asparagus...    59   1e-07

>gb|ONK69931.1| uncharacterized protein A4U43_C05F28350 [Asparagus officinalis]
          Length = 233

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = -2

Query: 148 SVVLDDGNCTSHDKEEEGSSAAGLVSSNSDEESSGRLSEQSNLEEAMGV 2
           SVVLDDG+C SHDKEEEG+SAAGLVS++SD ESSGRLSEQSNL+E +GV
Sbjct: 31  SVVLDDGSCMSHDKEEEGTSAAGLVSASSDGESSGRLSEQSNLDEVIGV 79


>ref|XP_020266883.1| LOW QUALITY PROTEIN: protein SDE2 homolog [Asparagus officinalis]
          Length = 384

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 40/49 (81%), Positives = 46/49 (93%)
 Frame = -2

Query: 148 SVVLDDGNCTSHDKEEEGSSAAGLVSSNSDEESSGRLSEQSNLEEAMGV 2
           SVVLDDG+C SHDKEEEG+SAAGLVS++SD ESSGRLSEQSNL+E +GV
Sbjct: 182 SVVLDDGSCMSHDKEEEGTSAAGLVSASSDGESSGRLSEQSNLDEVIGV 230


>ref|XP_020275966.1| RING-H2 finger protein ATL66-like [Asparagus officinalis]
          Length = 243

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 45/83 (54%), Positives = 48/83 (57%)
 Frame = +2

Query: 200 YLRAKGYSGTIASSRSRRLVFAPHELALPRHALDPSILNSLPITVFHSKXXXXXXXXXXX 379
           Y+RAKGY      SRS RL+FAPHE ALPRHALDPSIL SL ITVF S+           
Sbjct: 37  YIRAKGYLRNSRPSRSSRLIFAPHEPALPRHALDPSILRSLHITVFRSE--DYKEEGGLE 94

Query: 380 XXXXXXXXXDGEVVRLLPKCSHG 448
                    DGE  R LPKC HG
Sbjct: 95  CAVCLCELNDGENARFLPKCKHG 117


>ref|XP_020256975.1| RING-H2 finger protein ATL2-like [Asparagus officinalis]
          Length = 286

 Score = 76.6 bits (187), Expect = 8e-14
 Identities = 46/84 (54%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
 Frame = +2

Query: 200 YLRAKGYSGTIAS--SRSRRLVFAPHELALPRHALDPSILNSLPITVFHSKXXXXXXXXX 373
           YL+AKGYSGT  S  SR  RL FA H+   PR ALDPSILNSLPIT F+SK         
Sbjct: 42  YLKAKGYSGTTGSFSSRRHRLSFATHQPTHPRLALDPSILNSLPITTFNSK-NFNEEEDC 100

Query: 374 XXXXXXXXXXXDGEVVRLLPKCSH 445
                      DGE VRLLPKC+H
Sbjct: 101 IECAVCLCELSDGEEVRLLPKCNH 124


>ref|XP_020255210.1| RING-H2 finger protein ATL60-like [Asparagus officinalis]
          Length = 259

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
 Frame = +2

Query: 200 YLRAKGYSGTIASSR--SRRLVFAPHELALPRHALDPSILNSLPITVFHSKXXXXXXXXX 373
           YLRAKGYSGT+  SR  +R L FAP+E +  R ALDPSIL +LPIT+F SK         
Sbjct: 41  YLRAKGYSGTMGLSRPSARHLAFAPNEPSTFRRALDPSILRTLPITLFQSK--DFEEEGG 98

Query: 374 XXXXXXXXXXXDGEVVRLLPKCSHG 448
                      DGE +RLLP+C+HG
Sbjct: 99  LECAVCLSELNDGEKIRLLPRCNHG 123


>ref|XP_020276386.1| RING-H2 finger protein ATL48-like [Asparagus officinalis]
          Length = 206

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 35/83 (42%), Positives = 41/83 (49%)
 Frame = +2

Query: 200 YLRAKGYSGTIASSRSRRLVFAPHELALPRHALDPSILNSLPITVFHSKXXXXXXXXXXX 379
           YLR KGYSGTI  S         H L L + ALD SI+ SLP+T+F +K           
Sbjct: 41  YLRVKGYSGTIGFSTP-----TSHHLNLQKQALDQSIIKSLPVTLFQTK---ELVECGLE 92

Query: 380 XXXXXXXXXDGEVVRLLPKCSHG 448
                    DGE +R LPKC HG
Sbjct: 93  CAVCLSKVNDGEKIRFLPKCKHG 115


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