BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00003755
         (559 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]          121   2e-28
dbj|GAU47849.1| hypothetical protein TSUD_404260 [Trifolium subt...   120   3e-28
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   118   9e-28
ref|XP_013746494.2| uncharacterized protein BNAC09G10640D [Brass...   119   1e-27
ref|XP_022549646.1| uncharacterized protein LOC111201676, partia...   119   1e-27
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo...   116   1e-26
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo...   115   2e-26
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo...   115   2e-26
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo...   115   2e-26
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo...   113   1e-25
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     113   1e-25
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]   112   2e-25
gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposo...   112   3e-25
gb|KZV43388.1| hypothetical protein F511_21980 [Dorcoceras hygro...   108   3e-25
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              111   5e-25
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              111   5e-25
gb|OTG31811.1| putative retrovirus-related Pol polyprotein from ...   110   9e-25
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  110   2e-24
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   109   3e-24
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              109   3e-24

>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
          Length = 876

 Score =  121 bits (303), Expect = 2e-28
 Identities = 75/215 (34%), Positives = 108/215 (50%), Gaps = 30/215 (13%)
 Frame = -3

Query: 557  TKGAFVSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXX 378
            +K   +SRDVVFDE  +L++    E      V E +  S   + ++VE            
Sbjct: 612  SKKMVLSRDVVFDEQFMLKQSRETE------VTESAGGSSGKEVIQVE-----------L 654

Query: 377  XXXSDNGDDQVATPEPQPVPLR------------------------RSERHVGHPDRYGW 270
                +     V    P+P P+                         R  R +  P RYG+
Sbjct: 655  EPTPNKNTSAVHQQPPEPTPINHDTADSGGASEDSVGVDDYQLARDRERRSINPPQRYGF 714

Query: 269  EPSDYGAFALLTEAGEPSSYKEAIAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRA 90
            E  D  A+ALLT +G+PS+++EAI + + D W+ AM  EMESL +NQTW LV LP G R 
Sbjct: 715  E--DLAAYALLTSSGDPSTFREAIVSQEKDKWMGAMMEEMESLQKNQTWELVQLPMGKRT 772

Query: 89   IGCRWVFRK------KDPEHYKVRLVAKGYAQKEG 3
            IGC+WV+++      K+ E +K RLVAKGY+Q++G
Sbjct: 773  IGCKWVYKRKSAVTEKEGEKFKARLVAKGYSQQKG 807


>dbj|GAU47849.1| hypothetical protein TSUD_404260 [Trifolium subterraneum]
          Length = 887

 Score =  120 bits (302), Expect = 3e-28
 Identities = 76/201 (37%), Positives = 110/201 (54%), Gaps = 17/201 (8%)
 Frame = -3

Query: 557 TKGAFVSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVED---GSKXXXXX 387
           +K   +SRDVVFDE  +L++    E    GG P      +   +VE+E     +      
Sbjct: 357 SKKMVLSRDVVFDEQFMLKQPEVTESA--GGSPH-----KEAIQVEIEPTPTNNIPQVHQ 409

Query: 386 XXXXXXSDNGDDQV--------ATPEPQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTE 231
                   N D +V        A      +   R  R V  P+RYG+E  D  A+ALLT 
Sbjct: 410 QPPETIITNNDTEVLGGATGELAGEHDYQLVRDRERRSVKPPERYGYE--DLAAYALLTS 467

Query: 230 AGEPSSYKEAIAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRK---- 63
           +G+PS+++EA+A+ + + W+ AM  EMESL +NQTW LV LPKG R IGC+WV+++    
Sbjct: 468 SGDPSTFREAMASQEKERWMGAMMEEMESLQKNQTWELVQLPKGKRVIGCKWVYKRKPAV 527

Query: 62  --KDPEHYKVRLVAKGYAQKE 6
             K+ E +K RLVAKGY+Q++
Sbjct: 528 TEKEGEKFKARLVAKGYSQQK 548



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
 Frame = -3

Query: 164 MESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRLVAKGYAQKEG 3
           M  EM+SL +N TW LVD P G + +GCRWV+  K       E +K RLVAKGY Q  G
Sbjct: 1   MNEEMKSLKKNNTWELVDCPPGKKIVGCRWVYTVKYKVDGTIERFKARLVAKGYTQTYG 59


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 530

 Score =  118 bits (296), Expect = 9e-28
 Identities = 70/199 (35%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
 Frame = -3

Query: 557 TKGAFVSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXX 378
           TK   +SRDV F+E ++  ++   E+    G    +       E EVED +K        
Sbjct: 83  TKKIVISRDVTFNESAMFGQKEEVENLA--GNKSTNKGVHQKVEFEVEDSNKENLNPVEQ 140

Query: 377 XXXSDNGDDQVATPEPQPVPLRRSERHVGHPDRYG----WEPSDYGAFALLT----EAGE 222
                         EPQ +  RR+ R +  P RY        ++  A+ALL     ++ E
Sbjct: 141 SSNVQE--------EPQSIATRRTRREIRKPTRYADVTNVVDTNSVAYALLVGENLDSDE 192

Query: 221 PSSYKEAIAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK------ 60
           P SYKEAI + ++  W++AM+ EM+SL +NQTW LV LP+G + +GC+WV ++K      
Sbjct: 193 PKSYKEAIQSKEASKWLIAMDEEMQSLKKNQTWELVPLPRGVKPVGCKWVLKRKEGIPGV 252

Query: 59  DPEHYKVRLVAKGYAQKEG 3
           +P  +K RLVAKG++QKEG
Sbjct: 253 EPSRFKARLVAKGFSQKEG 271


>ref|XP_013746494.2| uncharacterized protein BNAC09G10640D [Brassica napus]
          Length = 1347

 Score =  119 bits (297), Expect = 1e-27
 Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 15/194 (7%)
 Frame = -3

Query: 539  SRDVVFDEDSILQERSSAEDKVQ--------GGVPEVSDNSRLGQEVEVEDGSKXXXXXX 384
            SRDVVF ED  +++   ++   Q           P  S +  +  EVEV+D +       
Sbjct: 719  SRDVVFMEDQTIKDIDKSKKPTQIFEGLIDTEATPSTSVHGEV--EVEVQDNTPSADAPA 776

Query: 383  XXXXXSDNGDDQVATP--EPQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSY 210
                  D+GDD   TP  E QP  +RRSER +    RY  +PS+Y    LLT+ GEP SY
Sbjct: 777  HEDGSGDHGDDHGETPAAENQPTIVRRSERGLKPSTRY--DPSEY---VLLTDGGEPESY 831

Query: 209  KEAIAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKKD-----PEHY 45
             EA+  +  D W  AM+ EM+S + N T+ LV+LPKG +A+  +WV+R K      P  +
Sbjct: 832  DEALEDEHKDKWFGAMDEEMDSFEENHTFELVELPKGKKALLNKWVYRIKHEDDNLPPRH 891

Query: 44   KVRLVAKGYAQKEG 3
            K RLV KGY+QK+G
Sbjct: 892  KARLVVKGYSQKKG 905


>ref|XP_022549646.1| uncharacterized protein LOC111201676, partial [Brassica napus]
          Length = 2325

 Score =  119 bits (297), Expect = 1e-27
 Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 15/194 (7%)
 Frame = -3

Query: 539  SRDVVFDEDSILQERSSAEDKVQ--------GGVPEVSDNSRLGQEVEVEDGSKXXXXXX 384
            SRDVVF ED  +++   ++   Q           P  S +  +  EVEV+D +       
Sbjct: 541  SRDVVFMEDQTIKDIDKSKKPTQIFEGLIDTEATPSTSVHGEV--EVEVQDNTPSADAPA 598

Query: 383  XXXXXSDNGDDQVATP--EPQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSY 210
                  D+GDD   TP  E QP  +RRSER +    RY  +PS+Y    LLT+ GEP SY
Sbjct: 599  HEDGSGDHGDDHGETPAAENQPTIVRRSERGLKPSTRY--DPSEY---VLLTDGGEPESY 653

Query: 209  KEAIAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKKD-----PEHY 45
             EA+  +  D W  AM+ EM+S + N T+ LV+LPKG +A+  +WV+R K      P  +
Sbjct: 654  DEALEDEHKDKWFGAMDEEMDSFEENHTFELVELPKGKKALLNKWVYRIKHEDDNLPPRH 713

Query: 44   KVRLVAKGYAQKEG 3
            K RLV KGY+QK+G
Sbjct: 714  KARLVVKGYSQKKG 727



 Score =  119 bits (297), Expect = 1e-27
 Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 15/194 (7%)
 Frame = -3

Query: 539  SRDVVFDEDSILQERSSAEDKVQ--------GGVPEVSDNSRLGQEVEVEDGSKXXXXXX 384
            SRDVVF ED  +++   ++   Q           P  S +  +  EVEV+D +       
Sbjct: 1697 SRDVVFMEDQTIKDIDKSKKPTQIFEGLIDTEATPSTSVHGEV--EVEVQDNTPSADAPA 1754

Query: 383  XXXXXSDNGDDQVATP--EPQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSY 210
                  D+GDD   TP  E QP  +RRSER +    RY  +PS+Y    LLT+ GEP SY
Sbjct: 1755 HEDGSGDHGDDHGETPAAENQPTIVRRSERGLKPSTRY--DPSEY---VLLTDGGEPESY 1809

Query: 209  KEAIAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKKD-----PEHY 45
             EA+  +  D W  AM+ EM+S + N T+ LV+LPKG +A+  +WV+R K      P  +
Sbjct: 1810 DEALEDEHKDKWFGAMDEEMDSFEENHTFELVELPKGKKALLNKWVYRIKHEDDNLPPRH 1869

Query: 44   KVRLVAKGYAQKEG 3
            K RLV KGY+QK+G
Sbjct: 1870 KARLVVKGYSQKKG 1883


>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  116 bits (290), Expect = 1e-26
 Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
 Frame = -3

Query: 542  VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXSD 363
            VSRDVVF E  + +E+ +        + E+   S+       +D S+            D
Sbjct: 648  VSRDVVFAETELQKEQENDSTIKDTSIVEIGGKSK------EDDTSEAEQEHDEQEPNED 701

Query: 362  NGDDQVATPEPQPVPLRRSERHVGHPDRYG-WEPSDYGAFALLTEAGEPSSYKEAIAADD 186
            N  D           +RR+ R    P  +  +  + + A+ LLTE GEPS+++EA+ + D
Sbjct: 702  NDGD-----------VRRTTRQTKKPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSD 750

Query: 185  SDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRLVAKG 21
               W+ AM  E+E+L RN+TW LVDLPKG +AIGC+WV++ K       E Y+ RLV KG
Sbjct: 751  VSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKG 810

Query: 20   YAQKEG 3
            YAQKEG
Sbjct: 811  YAQKEG 816


>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  115 bits (289), Expect = 2e-26
 Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
 Frame = -3

Query: 542  VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXSD 363
            VSRDVVF E  + +E+ +        + E+   S+     E E   +            +
Sbjct: 648  VSRDVVFAETELQKEQENDSTIKDTSIVEIGGKSKKDDTSEAEQEHE------------E 695

Query: 362  NGDDQVATPEPQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSYKEAIAADDS 183
               D+    E Q +  R   R   H D   +  + + A+ LLTE GEPS+++EA+ + D 
Sbjct: 696  QEPDEANDEEVQQIR-RERRRPSWHSD---YVMASHDAYCLLTEEGEPSTFQEALRSSDV 751

Query: 182  DGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRLVAKGY 18
              W+ AM  E+E+L RN+TW LVDLPKG +AIGC+WV++ K       E Y+ RLV KGY
Sbjct: 752  SQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGY 811

Query: 17   AQKEG 3
            AQKEG
Sbjct: 812  AQKEG 816


>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  115 bits (289), Expect = 2e-26
 Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
 Frame = -3

Query: 542  VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXSD 363
            VSRDVVF E  + +E+ +        + E+   S+     E E   +            +
Sbjct: 648  VSRDVVFAETELQKEQENDSTIKDTSIVEIGGKSKKDDTSEAEQEHE------------E 695

Query: 362  NGDDQVATPEPQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSYKEAIAADDS 183
               D+    E Q +  R   R   H D   +  + + A+ LLTE GEPS+++EA+ + D 
Sbjct: 696  QEPDEANDEEVQQIR-RERRRPSWHSD---YVMASHDAYCLLTEEGEPSTFQEALRSSDV 751

Query: 182  DGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRLVAKGY 18
              W+ AM  E+E+L RN+TW LVDLPKG +AIGC+WV++ K       E Y+ RLV KGY
Sbjct: 752  SQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGY 811

Query: 17   AQKEG 3
            AQKEG
Sbjct: 812  AQKEG 816


>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  115 bits (289), Expect = 2e-26
 Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
 Frame = -3

Query: 542  VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXSD 363
            VSRDVVF E  + +E+ +        + E+   S+     E E   +            +
Sbjct: 697  VSRDVVFAETELQKEQENDSTIKDTSIVEIGGKSKKDDTSEAEQEHE------------E 744

Query: 362  NGDDQVATPEPQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSYKEAIAADDS 183
               D+    E Q +  R   R   H D   +  + + A+ LLTE GEPS+++EA+ + D 
Sbjct: 745  QEPDEANDEEVQQIR-RERRRPSWHSD---YVMASHDAYCLLTEEGEPSTFQEALRSSDV 800

Query: 182  DGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRLVAKGY 18
              W+ AM  E+E+L RN+TW LVDLPKG +AIGC+WV++ K       E Y+ RLV KGY
Sbjct: 801  SQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGY 860

Query: 17   AQKEG 3
            AQKEG
Sbjct: 861  AQKEG 865


>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  113 bits (283), Expect = 1e-25
 Identities = 68/185 (36%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
 Frame = -3

Query: 542  VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXSD 363
            VSRDVVF E  + +E+ +        + E+   S+     E E   +            +
Sbjct: 697  VSRDVVFAETELQKEQENDSTIKDTSIVEIGGKSKKDDTSEAEQEHE------------E 744

Query: 362  NGDDQVATPEPQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSYKEAIAADDS 183
               D+    E Q +  R   R   H D   +  + + A+ LLTE GEPS+++EA+ + D 
Sbjct: 745  QEPDEANDEEVQQIR-RERRRPSWHSD---YVMASHDAYCLLTEEGEPSTFQEALRSSDV 800

Query: 182  DGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRLVAKGY 18
              W+ AM  E+E+L RN+TW LVDLPKG +AIGC+WV++ K       E Y+ RLV KGY
Sbjct: 801  SQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQVERYRARLVVKGY 860

Query: 17   AQKEG 3
            AQK G
Sbjct: 861  AQKAG 865


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  113 bits (282), Expect = 1e-25
 Identities = 69/192 (35%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
 Frame = -3

Query: 542  VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGS--KXXXXXXXXXXX 369
            +SRDVVFDE   +   S A+  V     +V  N +   EV +E+    +           
Sbjct: 670  ISRDVVFDEREAISI-SLAKPSVADSEAQVEQNEQGNDEVAIEEPEHQQQPTVMAQVEQS 728

Query: 368  SDNGDDQVATPEPQP----VPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSYKEA 201
               G +      P+     + L + +R+     R+G+EP +  + AL    G+P++Y++A
Sbjct: 729  PQRGQNSPIPQAPESFKRSIALDKPKRNRKPIQRFGFEPEEDVSRALSISQGDPTTYEDA 788

Query: 200  IAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKKDPEH------YKV 39
            I + +S GW+ AM  EMESL +N  W LV  PK  + +GC+WVFRKK+  H      YK 
Sbjct: 789  IESVESAGWIGAMTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKA 848

Query: 38   RLVAKGYAQKEG 3
            RLVAKGY+QKEG
Sbjct: 849  RLVAKGYSQKEG 860


>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
          Length = 903

 Score =  112 bits (281), Expect = 2e-25
 Identities = 71/186 (38%), Positives = 98/186 (52%), Gaps = 7/186 (3%)
 Frame = -3

Query: 539 SRDVVFDEDSILQ--ERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXS 366
           SRD +F ED  +Q  E+   ED+      ++  N     +VE++D               
Sbjct: 470 SRDAMFMEDHTIQDIEKIDVEDEAHDDQLDIG-NVENPTQVEMDD--------------- 513

Query: 365 DNGDDQVATPEPQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSYKEAIAADD 186
           D  +  +    P  +PLRRS R   H  RY  +      + LLT+ GEP SYKEA+  ++
Sbjct: 514 DVHEQSLVAEAPLDIPLRRSTRDRHHSTRYSVDD-----YVLLTDGGEPESYKEAMGDEN 568

Query: 185 SDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKKDPEH-----YKVRLVAKG 21
              WV AM+ EM+SL  N ++ LV+LPKG RA+  RWV+R K  EH     YK RLV KG
Sbjct: 569 KIKWVDAMQDEMKSLHENHSYELVELPKGKRALKNRWVYRVKQEEHASQPRYKARLVVKG 628

Query: 20  YAQKEG 3
           Y+QK+G
Sbjct: 629 YSQKKG 634


>gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 595

 Score =  112 bits (279), Expect = 3e-25
 Identities = 68/203 (33%), Positives = 108/203 (53%), Gaps = 19/203 (9%)
 Frame = -3

Query: 554 KGAFVSRDVVFDEDSILQERSSAEDKV--QGGVPEVSDNSRLGQEVEVEDGSKXXXXXXX 381
           K   +SRDV+FDE  +   +             P+V     + ++ E +D          
Sbjct: 315 KKVILSRDVIFDESHLFHPKLEVPITATHNSHPPQVGKVESISEKTEDKDLLDKFSEASQ 374

Query: 380 XXXXSDNG--DDQVATPEPQPVPL-----RRSERHVGHPDRYGWEPSDYGAFALLT---- 234
               S+N   ++     EP  + L     ++ +R +  P+RYG+E  D   +AL      
Sbjct: 375 EEEQSENSSANESHQNAEPDSIQLNPGISQKPKRVIKPPERYGFE--DMATYALHAAEEI 432

Query: 233 EAGEPSSYKEAIAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRK--- 63
           ++ EP++YKEAI+  +++ W++AM  EMESL +NQTW LV+LPKG   +GC+W+++K   
Sbjct: 433 DSDEPTTYKEAISHPEAEKWILAMREEMESLYKNQTWKLVELPKGRHVVGCKWIYKKKSI 492

Query: 62  ---KDPEHYKVRLVAKGYAQKEG 3
              K+   YK RLVAKG++QKEG
Sbjct: 493 FSEKEEIRYKARLVAKGFSQKEG 515


>gb|KZV43388.1| hypothetical protein F511_21980 [Dorcoceras hygrometricum]
          Length = 326

 Score =  108 bits (271), Expect = 3e-25
 Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 10/190 (5%)
 Frame = -3

Query: 542 VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXSD 363
           +SRDV+F+ED +  ++ +  +     V   +D  ++      E                 
Sbjct: 111 ISRDVIFEEDKVKGDKGAQSETTTIQVENKTDEDQISYGAIPEH---------------- 154

Query: 362 NGDDQVATPEPQPVPLRRSERHVGHPDRYGWEPSDYG-----AFALLTEAGEPSSYKEAI 198
              ++  + E +   +R+S R    P   GW  SDY      A+ LLTE GEPSS++EA 
Sbjct: 155 ---EEQESVESEVSKVRQSTRERRPP---GWL-SDYVTESNIAYCLLTEDGEPSSFQEAT 207

Query: 197 AADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFR-KKDP----EHYKVRL 33
            + D   W+ AM+ E+E+LDRN+TW LV LP+G +AIG RWV++ K+D     E Y+ RL
Sbjct: 208 QSSDVSLWMTAMQEELEALDRNKTWDLVTLPQGRKAIGNRWVYKIKRDSNNQVERYRARL 267

Query: 32  VAKGYAQKEG 3
           V KGYAQKEG
Sbjct: 268 VVKGYAQKEG 277


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  111 bits (278), Expect = 5e-25
 Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 10/190 (5%)
 Frame = -3

Query: 542  VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXSD 363
            VSRDVVF E+ +  E+ +     +  + ++ + S+     E E   +            D
Sbjct: 698  VSRDVVFAENELQSEQKNDSTSKETAIVQMEEKSKESDSSEAESVHEEQEP--------D 749

Query: 362  NGDDQVATPEPQPVPLRRSERHVGHPDRYGWEPSDY-----GAFALLTEAGEPSSYKEAI 198
            + +D V          RRS R    P    W+ SDY      A+ L+TE GEPS++ EA+
Sbjct: 750  DVNDGV----------RRSTRQTQKPS---WQ-SDYVMTSHDAYCLITEEGEPSTFHEAL 795

Query: 197  AADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRL 33
               D+  W+ AM  EME+L RN+TW LV+LPKG +AIG +WV++ K       E Y+ RL
Sbjct: 796  NGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARL 855

Query: 32   VAKGYAQKEG 3
            V KGYAQKEG
Sbjct: 856  VVKGYAQKEG 865


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  111 bits (278), Expect = 5e-25
 Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 10/190 (5%)
 Frame = -3

Query: 542  VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXSD 363
            VSRDVVF E+ +  E+ +     +  + ++ + S+     E E   +            D
Sbjct: 698  VSRDVVFAENELQSEQKNDSTSKETAIVQMEEKSKESDSSEAESVHEEQEP--------D 749

Query: 362  NGDDQVATPEPQPVPLRRSERHVGHPDRYGWEPSDY-----GAFALLTEAGEPSSYKEAI 198
            + +D V          RRS R    P    W+ SDY      A+ L+TE GEPS++ EA+
Sbjct: 750  DVNDGV----------RRSTRQTQKPS---WQ-SDYVMTSHDAYCLITEEGEPSTFHEAL 795

Query: 197  AADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRL 33
               D+  W+ AM  EME+L RN+TW LV+LPKG +AIG +WV++ K       E Y+ RL
Sbjct: 796  NGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARL 855

Query: 32   VAKGYAQKEG 3
            V KGYAQKEG
Sbjct: 856  VVKGYAQKEG 865


>gb|OTG31811.1| putative retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Helianthus annuus]
          Length = 1307

 Score =  110 bits (276), Expect = 9e-25
 Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 13/192 (6%)
 Frame = -3

Query: 539  SRDVVFDEDSILQERSSAEDKVQGGVPEV-SDNSRLGQEVEV-EDGSKXXXXXXXXXXXS 366
            S++VVF+E+ + ++R++   +VQ    E  S   R    V++ E+G +           S
Sbjct: 683  SKNVVFNENELYKDRNTKGPEVQKEYVEFESGEKRKEASVDIPENGDESSDSGSLGDDSS 742

Query: 365  DNGDDQVATPE-------PQPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGEPSSYK 207
            ++ +++ ATP        PQ  P RRS R    P+RY    S    + LLTE GEP  Y 
Sbjct: 743  NDSEEEEATPSTPNSPETPQVQP-RRSSRATRPPNRY----SPSVNYILLTENGEPQCYS 797

Query: 206  EAIAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKKD----PEHYKV 39
            EA+   DS  W +AM+ EM+SL++N+TW L+ LP G +A+  +WVFR KD     + YK 
Sbjct: 798  EAMGLKDSLQWELAMKDEMKSLEKNKTWHLIKLPPGKKALQNKWVFRVKDEHDGAKRYKA 857

Query: 38   RLVAKGYAQKEG 3
            RLV KG+ QKEG
Sbjct: 858  RLVVKGFQQKEG 869


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  110 bits (274), Expect = 2e-24
 Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
 Frame = -3

Query: 545  FVSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNS-RLGQEVEVEDGSKXXXXXXXXXXX 369
            FVSRDV+F E+ + +E+ +     +    E+ + S     E E E               
Sbjct: 697  FVSRDVIFVENELQKEQKNDGTTKETATVEIEEKSGEENSEAEPEH-------------- 742

Query: 368  SDNGDDQVATPEPQPVPLRRSERHVGHPDRYG-WEPSDYGAFALLTEAGEPSSYKEAIAA 192
             +   ++V   EP     RR+ R +  P  +  +  + + A+ LL+E GEPS++ EA+  
Sbjct: 743  EEQEPNEVNDAEP-----RRTTRQIRKPSWHSEYVMASHDAYCLLSEDGEPSTFHEAVNG 797

Query: 191  DDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRLVA 27
             D+  W+ AM+ E+E+L RN TW LV+LPKG +AIG +WVF+ K       E Y+ RLV 
Sbjct: 798  SDASLWMAAMQEEIEALHRNNTWELVELPKGRKAIGNKWVFKIKRDGNDQVERYRARLVV 857

Query: 26   KGYAQKEG 3
            KGYAQKEG
Sbjct: 858  KGYAQKEG 865


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  109 bits (272), Expect = 3e-24
 Identities = 72/196 (36%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
 Frame = -3

Query: 557  TKGAFVSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXX 378
            TK   +SRDV FDE ++L  + + E K  G   +V    ++      E+ +         
Sbjct: 475  TKKTIISRDVTFDESTMLG-KVTTEQKKNGTPKQVEFERKIVFPANDEEKTPMVDE---- 529

Query: 377  XXXSDNGDDQVATPEP----QPVPLRRSERHVGHPDRYGWEPSDYGAFALLTEAGE-PSS 213
                ++ +++V   EP    + + LR+ +R    P RY     D  ++A    + + P++
Sbjct: 530  ----ESDEEEVHIQEPPQQLESIALRKPKRTTIMPARY----VDMVSYASPVASDDIPTT 581

Query: 212  YKEAIAADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKKD------PE 51
            Y EA+   + D W  AM  EMESL RNQTW L +LPKG +AIGC+WV+ KKD        
Sbjct: 582  YIEAVKGSEEDKWRSAMSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEV 641

Query: 50   HYKVRLVAKGYAQKEG 3
             YK RLVAKGYAQKEG
Sbjct: 642  RYKARLVAKGYAQKEG 657


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  109 bits (272), Expect = 3e-24
 Identities = 68/190 (35%), Positives = 98/190 (51%), Gaps = 10/190 (5%)
 Frame = -3

Query: 542  VSRDVVFDEDSILQERSSAEDKVQGGVPEVSDNSRLGQEVEVEDGSKXXXXXXXXXXXSD 363
            VSRDVVF E+ +  ++ +     +  + ++ + S+     E E   +             
Sbjct: 698  VSRDVVFAENELQSKQKNDSTSKETAIVQMEEKSKESDSSEAEPVHEEQE---------- 747

Query: 362  NGDDQVATPEPQPVPLRRSERHVGHPDRYGWEPSDY-----GAFALLTEAGEPSSYKEAI 198
                    P+     +RRS R    P    W+ SDY      A+ L+TE GEPS++ EA+
Sbjct: 748  --------PDDVNNGVRRSTRQTQKPS---WQ-SDYVMTSHDAYCLITEEGEPSTFHEAL 795

Query: 197  AADDSDGWVVAMESEMESLDRNQTWGLVDLPKGSRAIGCRWVFRKK-----DPEHYKVRL 33
               D+  W+ AM  EME+L RN+TW LV+LPKG +AIG +WV++ K       E Y+ RL
Sbjct: 796  NGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARL 855

Query: 32   VAKGYAQKEG 3
            V KGYAQKEG
Sbjct: 856  VVKGYAQKEG 865