BLASTX nr result

ID: Ophiopogon27_contig00003675 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00003675
         (394 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ANM29506.1| hypothetical protein ABI59_07795 [Acidobacteria b...    65   1e-09
emb|CYV41655.1| Uncharacterised protein [Streptococcus suis]           57   5e-07

>gb|ANM29506.1| hypothetical protein ABI59_07795 [Acidobacteria bacterium Mor1]
          Length = 2021

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 14/123 (11%)
 Frame = -2

Query: 369  FWRSLASWVWLNLGFWWSFLRVW----------GFWWNWWVLGLGFC*AWRIWGNWR-SG 223
            FW +  +W   +   WW++   W          GFWWNWW    G+   W  WG W  +G
Sbjct: 1855 FWNTWWAWHPYHWNGWWTWSPFWWHGYWGWSGLGFWWNWW----GWVKCWWPWGWWNWAG 1910

Query: 222  LGLRWHWISWA*WVWFGFRNPRLDFSSL*WVWGSVGRLILLLARFGLKI---SSLVWVWR 52
             G  W W  W  W W+G+ +         W WG +G        FG          W W 
Sbjct: 1911 WGAWWGWFGWNPWWWWGWWS--------WWHWGWIGGHHWWWGPFGWGTWFGWGWFWPWH 1962

Query: 51   WVG 43
            W G
Sbjct: 1963 WWG 1965


>emb|CYV41655.1| Uncharacterised protein [Streptococcus suis]
          Length = 294

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
 Frame = -2

Query: 366 WRSLASWVWLNLGFWWSFLRVWGFWWNW--WV--LGLGFC*AWRIWGNWRSGLGLR---- 211
           W   AS+VW     WW     W  W NW  W+  L + +C AW +W  W   + +R    
Sbjct: 133 WCVNASFVWC----WWHITLAWICWINWFQWLVCLRIYWCVAWNMWNGWNFTIWVRCCWI 188

Query: 210 -WH-WISWA*WVWFGFRNPRLDFSSL*WVWGSVGRLILLLARFGLKISSLVWVWRWV 46
            W  W+SW  W+W  FR   L F     +W  V   ++L+  +    S+      WV
Sbjct: 189 DWFIWVSWVEWIW-NFR--FLSFWYTWNLWNPVRNFLVLVGYYSCTFSNFTCFSNWV 242


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