BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00003336
         (2275 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK79917.1| uncharacterized protein A4U43_C01F11790 [Asparagu...   622   0.0  
ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 ...   586   0.0  
ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 ...   564   0.0  
ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB ...   555   0.0  
ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 ...   551   0.0  
ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-...   526   e-176
ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-...   525   e-176
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-...   517   e-172
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ...   515   e-172
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-...   509   e-169
ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-...   504   e-168
ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB ...   503   e-167
ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania u...   502   e-167
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   500   e-166
ref|XP_017627350.1| PREDICTED: RNA polymerase sigma factor sigB ...   498   e-165
ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB ...   496   e-164
gb|OMP03365.1| RNA polymerase sigma-70 [Corchorus capsularis]         494   e-163
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ...   493   e-163
ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB ...   490   e-162
ref|XP_018817643.1| PREDICTED: RNA polymerase sigma factor sigB ...   487   e-161

>gb|ONK79917.1| uncharacterized protein A4U43_C01F11790 [Asparagus officinalis]
          Length = 531

 Score =  622 bits (1604), Expect = 0.0
 Identities = 358/562 (63%), Positives = 388/562 (69%), Gaps = 7/562 (1%)
 Frame = +2

Query: 149  MASLVPPFNCPSLHQTHTHQAKNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSSS-- 322
            MASLVPPFNCPSLHQT   QAK R   SFRI+C S+QMTAVIDFEKTQIP +++YS+S  
Sbjct: 1    MASLVPPFNCPSLHQTP--QAKARGLFSFRIECSSSQMTAVIDFEKTQIPTVESYSNSLA 58

Query: 323  -----RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXQM 487
                 R++GA   P K DF+ATL  E LLT                             M
Sbjct: 59   AGRASRYVGAVGLPFKADFEATLATEELLTSEEATIEAAAAEAIALARAALEVAKDAALM 118

Query: 488  KGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEGPIPPSPSED 667
            KG E S+   R EN   + D ILLERVR EE+ESLG  N+S+ PE E LE        ED
Sbjct: 119  KGKEPSIS--RSENTQPEHDQILLERVRQEELESLGTENNSSTPEIE-LE--------ED 167

Query: 668  EGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 847
             G      N++DLQ++  S+CI                                      
Sbjct: 168  NGTQ----NDVDLQQVLGSKCIAVRSRRQIERRARRAKAAVKAASSVILVKSGSSSKKKR 223

Query: 848  XXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQEELTERNGSPSTF 1027
                EIDYSDPLR+                        ELIKLERLQEEL+ERNGSP TF
Sbjct: 224  STVQEIDYSDPLRF--------------DLTLIFNRKPELIKLERLQEELSERNGSPPTF 269

Query: 1028 AQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQDLVQEGCRG 1207
            AQWATAAGVDS+TLRK+LNYGK+CKDKMI SNIRLVISIAKNFQGAGMNLQDLVQEGCRG
Sbjct: 270  AQWATAAGVDSRTLRKRLNYGKYCKDKMIKSNIRLVISIAKNFQGAGMNLQDLVQEGCRG 329

Query: 1208 LVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARKQLY 1387
            LVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARKQLY
Sbjct: 330  LVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARKQLY 389

Query: 1388 SENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEVIADPEASTS 1567
            SENGRYP+N EIAEAAGLTMKRFTAVMLTPKAPRSLDQK GI+QSLKPSEVIADPEA TS
Sbjct: 390  SENGRYPDNEEIAEAAGLTMKRFTAVMLTPKAPRSLDQKIGINQSLKPSEVIADPEALTS 449

Query: 1568 EEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGVAMGVSRERIRQIE 1747
            EEILIKQIVKRDL+KVLDSLS REKQVIKWRFGLGDGRMKTLQEIG ++GVSRERIRQIE
Sbjct: 450  EEILIKQIVKRDLYKVLDSLSPREKQVIKWRFGLGDGRMKTLQEIGESIGVSRERIRQIE 509

Query: 1748 SCAFXXXXXXXXXXXXXQHLIP 1813
            S AF             QHL+P
Sbjct: 510  SQAFRKLKNKKRTKNLRQHLMP 531


>ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 [Asparagus officinalis]
 gb|ONK58877.1| uncharacterized protein A4U43_C08F650 [Asparagus officinalis]
          Length = 557

 Score =  586 bits (1511), Expect = 0.0
 Identities = 322/547 (58%), Positives = 373/547 (68%), Gaps = 10/547 (1%)
 Frame = +2

Query: 149  MASLVPPFNCPSLHQTHTH---QAKNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSS 319
            MA LVP F CPS H  H H   Q K R PV  R QC+S+ MTAVI+ +KT +P LDA+++
Sbjct: 1    MACLVPQFKCPSSHHHHHHHPLQVKPRGPVYVRNQCVSSLMTAVIELDKTYVPTLDAHTN 60

Query: 320  SR-------FLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXX 478
            S        ++GA  PP+KTD+K T   E LLT                           
Sbjct: 61   SSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIAAAAAEAVALARAAVELAKDA 120

Query: 479  XQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEGPIPPSP 658
             QM   +  VK ++ ENFPS+ D+  L+R  L E+E L   N+         EG   P+ 
Sbjct: 121  AQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTNNQE-------EGHNTPNQ 173

Query: 659  SEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 838
            S+DEGISSL+ NE DLQ MQ+SE I                                   
Sbjct: 174  SKDEGISSLMLNEPDLQRMQESENITVRSMRQSERRARRAKAAEKAANNVISVKSGTSGK 233

Query: 839  XXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQEELTERNGSP 1018
                   EIDYSDPLRYLR                  +GIQ+LIKLE LQ ELTER G+P
Sbjct: 234  KKRSAAQEIDYSDPLRYLRGTTSNSKLLTADEELELSEGIQDLIKLESLQAELTERYGNP 293

Query: 1019 STFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQDLVQEG 1198
             TFAQWA AA VD++TLRK+LNYG++CKDKMI SNIRLVISIAKNFQG+GMNLQDLVQEG
Sbjct: 294  PTFAQWAMAARVDTRTLRKRLNYGRYCKDKMIKSNIRLVISIAKNFQGSGMNLQDLVQEG 353

Query: 1199 CRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARK 1378
            CRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVEATYRVREARK
Sbjct: 354  CRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARK 413

Query: 1379 QLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEVIADPEA 1558
            QLYSENGR+P++ EIAEA GLTMKR TAVML PKAPRSL+QK GI+Q+LKPSEVI+DP+A
Sbjct: 414  QLYSENGRHPDDEEIAEATGLTMKRLTAVMLIPKAPRSLEQKIGINQTLKPSEVISDPDA 473

Query: 1559 STSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGVAMGVSRERIR 1738
             T+EEIL+KQ++K+DL+KVLDSL+ REKQV++WRFGL DGRMKTLQEIG  MGVSRERIR
Sbjct: 474  LTTEEILVKQLMKQDLNKVLDSLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIR 533

Query: 1739 QIESCAF 1759
            QIESCAF
Sbjct: 534  QIESCAF 540


>ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 [Asparagus officinalis]
          Length = 554

 Score =  564 bits (1454), Expect = 0.0
 Identities = 309/523 (59%), Positives = 360/523 (68%), Gaps = 7/523 (1%)
 Frame = +2

Query: 212  KNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDAYSSSR-------FLGAFSPPAKTDFKA 370
            K R PV  R QC+S+ MTAVI+ +KT +P LDA+++S        ++GA  PP+KTD+K 
Sbjct: 22   KPRGPVYVRNQCVSSLMTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKT 81

Query: 371  TLPREVLLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDM 550
            T   E LLT                            QM   +  VK ++ ENFPS+ D+
Sbjct: 82   TWHAETLLTREEATIAAAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADI 141

Query: 551  ILLERVRLEEMESLGKANDSAIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSEC 730
              L+R  L E+E L   N+         EG   P+ S+DEGISSL+ NE DLQ MQ+SE 
Sbjct: 142  RQLKRPTLTELELLDTTNNQE-------EGHNTPNQSKDEGISSLMLNEPDLQRMQESEN 194

Query: 731  IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXX 910
            I                                          EIDYSDPLRYLR     
Sbjct: 195  ITVRSMRQSERRARRAKAAEKAANNVISVKSGTSGKKKRSAAQEIDYSDPLRYLRGTTSN 254

Query: 911  XXXXXXXXXXXXXQGIQELIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYG 1090
                         +GIQ+LIKLE LQ ELTER G+P TFAQWA AA VD++TLRK+LNYG
Sbjct: 255  SKLLTADEELELSEGIQDLIKLESLQAELTERYGNPPTFAQWAMAARVDTRTLRKRLNYG 314

Query: 1091 KHCKDKMIISNIRLVISIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAH 1270
            ++CKDKMI SNIRLVISIAKNFQG+GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAH
Sbjct: 315  RYCKDKMIKSNIRLVISIAKNFQGSGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAH 374

Query: 1271 WWIKQAVRRSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRYPENAEIAEAAGLTMK 1450
            WWIKQAVR+SLSDQSRTIRLPFHMVEATYRVREARKQLYSENGR+P++ EIAEA GLTMK
Sbjct: 375  WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGRHPDDEEIAEATGLTMK 434

Query: 1451 RFTAVMLTPKAPRSLDQKFGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLS 1630
            R TAVML PKAPRSL+QK GI+Q+LKPSEVI+DP+A T+EEIL+KQ++K+DL+KVLDSL+
Sbjct: 435  RLTAVMLIPKAPRSLEQKIGINQTLKPSEVISDPDALTTEEILVKQLMKQDLNKVLDSLN 494

Query: 1631 AREKQVIKWRFGLGDGRMKTLQEIGVAMGVSRERIRQIESCAF 1759
             REKQV++WRFGL DGRMKTLQEIG  MGVSRERIRQIESCAF
Sbjct: 495  PREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 537


>ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB [Phoenix dactylifera]
          Length = 566

 Score =  555 bits (1430), Expect = 0.0
 Identities = 311/553 (56%), Positives = 360/553 (65%), Gaps = 16/553 (2%)
 Frame = +2

Query: 149  MASLVPPFNCPS---------LHQTHTHQAKNRCPVSFRIQCISAQMTAVIDFEKTQIPG 301
            MA LVP F CPS         L    +  +K R  V FR  C+S    AVID ++  IP 
Sbjct: 1    MACLVPQFKCPSISPDAHFRPLSHHPSLNSKARDSVCFRSPCVSTLTAAVIDIQR--IPS 58

Query: 302  LDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXX 460
            L+A+S+S        ++GA  PP KT  +ATL  E LLTG                    
Sbjct: 59   LEAHSTSLDATRPLTYVGAVGPPMKTSIEATLATETLLTGEEAVIAAAAAEAVALARAAV 118

Query: 461  XXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEG 640
                   Q+ G++ SVK ++ E+F S+ D   LERVRL EME +   N+S   +TEP E 
Sbjct: 119  EVAKDAAQIIGNDPSVKLEKSEDFSSEADAFRLERVRLTEMELIRTTNNSTPTDTEPHEA 178

Query: 641  PIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 820
                 PS+   +S+L H EL+ Q+MQ  E I                             
Sbjct: 179  K---DPSQGTDVSNLTHKELESQQMQYPESIAVRSGRQTDRKARRTRAAEKAAVSVIPVK 235

Query: 821  XXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQEELT 1000
                         E+DYSDPLRYLR                  + IQ+++KLERLQ+EL 
Sbjct: 236  SGSTSKKKRSTFQEVDYSDPLRYLRGTTSTSKLLTAAEELELSEAIQDMLKLERLQQELA 295

Query: 1001 ERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQ 1180
            ER+G   TFAQWA AAGVD +TLRK+LNYG+ CKDKMI SNIRLVISIAKN+QGAGMNLQ
Sbjct: 296  ERHGGQPTFAQWAAAAGVDQRTLRKRLNYGRFCKDKMIKSNIRLVISIAKNYQGAGMNLQ 355

Query: 1181 DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYR 1360
            DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLS+QSRTIRLPFHMVEATYR
Sbjct: 356  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYR 415

Query: 1361 VREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEV 1540
            VREA+KQLYSENGRYP+  E+AEA GL+MKR  AVMLTPKAPRSLDQK GI+QSLKPSEV
Sbjct: 416  VREAKKQLYSENGRYPDYQEVAEATGLSMKRLNAVMLTPKAPRSLDQKIGINQSLKPSEV 475

Query: 1541 IADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGVAMGV 1720
            IADPEA TSEEILIKQ  K+DL+KVLD+L+ REKQV++WRFGL DG  KTLQEIG  MGV
Sbjct: 476  IADPEAETSEEILIKQFRKQDLNKVLDTLNPREKQVVRWRFGLEDGMTKTLQEIGELMGV 535

Query: 1721 SRERIRQIESCAF 1759
            SRERIRQIES AF
Sbjct: 536  SRERIRQIESSAF 548


>ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 [Asparagus officinalis]
          Length = 517

 Score =  551 bits (1419), Expect = 0.0
 Identities = 301/507 (59%), Positives = 350/507 (69%), Gaps = 7/507 (1%)
 Frame = +2

Query: 260  MTAVIDFEKTQIPGLDAYSSSR-------FLGAFSPPAKTDFKATLPREVLLTGXXXXXX 418
            MTAVI+ +KT +P LDA+++S        ++GA  PP+KTD+K T   E LLT       
Sbjct: 1    MTAVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIA 60

Query: 419  XXXXXXXXXXXXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGK 598
                                 QM   +  VK ++ ENFPS+ D+  L+R  L E+E L  
Sbjct: 61   AAAAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDT 120

Query: 599  ANDSAIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXX 778
             N+         EG   P+ S+DEGISSL+ NE DLQ MQ+SE I               
Sbjct: 121  TNNQE-------EGHNTPNQSKDEGISSLMLNEPDLQRMQESENITVRSMRQSERRARRA 173

Query: 779  XXXXXXXXXXXXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGI 958
                                       EIDYSDPLRYLR                  +GI
Sbjct: 174  KAAEKAANNVISVKSGTSGKKKRSAAQEIDYSDPLRYLRGTTSNSKLLTADEELELSEGI 233

Query: 959  QELIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVI 1138
            Q+LIKLE LQ ELTER G+P TFAQWA AA VD++TLRK+LNYG++CKDKMI SNIRLVI
Sbjct: 234  QDLIKLESLQAELTERYGNPPTFAQWAMAARVDTRTLRKRLNYGRYCKDKMIKSNIRLVI 293

Query: 1139 SIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSR 1318
            SIAKNFQG+GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSR
Sbjct: 294  SIAKNFQGSGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 353

Query: 1319 TIRLPFHMVEATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLD 1498
            TIRLPFHMVEATYRVREARKQLYSENGR+P++ EIAEA GLTMKR TAVML PKAPRSL+
Sbjct: 354  TIRLPFHMVEATYRVREARKQLYSENGRHPDDEEIAEATGLTMKRLTAVMLIPKAPRSLE 413

Query: 1499 QKFGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDG 1678
            QK GI+Q+LKPSEVI+DP+A T+EEIL+KQ++K+DL+KVLDSL+ REKQV++WRFGL DG
Sbjct: 414  QKIGINQTLKPSEVISDPDALTTEEILVKQLMKQDLNKVLDSLNPREKQVVRWRFGLEDG 473

Query: 1679 RMKTLQEIGVAMGVSRERIRQIESCAF 1759
            RMKTLQEIG  MGVSRERIRQIESCAF
Sbjct: 474  RMKTLQEIGELMGVSRERIRQIESCAF 500


>ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis guineensis]
          Length = 555

 Score =  526 bits (1354), Expect = e-176
 Identities = 303/553 (54%), Positives = 353/553 (63%), Gaps = 16/553 (2%)
 Frame = +2

Query: 149  MASLVPPFNCPSLH-----QTHTHQ----AKNRCPVSFRIQCISAQMTAVIDFEKTQIPG 301
            MA LVP F CPS+      ++ +H     +K R  V FR QC+S    AVID E   I  
Sbjct: 1    MACLVPQFKCPSMSSDAHFRSLSHHPSLNSKARDSVCFRSQCVSTPTAAVIDME--HILS 58

Query: 302  LDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXX 460
            L+A S+S        ++GA  PP KT+ +ATL  E LLTG                    
Sbjct: 59   LEARSTSLAATRPLTYVGAIGPPTKTNMEATLATEALLTGEEAIIAAAAAEAVALARTAV 118

Query: 461  XXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEG 640
                       ++ SVK ++  +F S+ D++ LER              S   +T+P E 
Sbjct: 119  EAAKDAALTIANDPSVKLEKSLDFSSEADILQLER--------------STATDTKPHEE 164

Query: 641  PIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 820
             +   PS+D  IS+L+HNEL+ Q+M  S  I                             
Sbjct: 165  HLAKDPSQDVDISNLIHNELEPQKMHYSGSIAVRSGRQTERIARRARAAERAASSVIPVK 224

Query: 821  XXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQEELT 1000
                         EIDYSDPLRYLR                  +GIQ+L+KLERL+EEL 
Sbjct: 225  SGSSSKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEELELSEGIQDLLKLERLREELE 284

Query: 1001 ERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQ 1180
            ERNG+  T AQWA AAGVD +TLRK+LNYG  CKDKMI SNIRLVISIAKN+QGAGMNLQ
Sbjct: 285  ERNGAQPTLAQWAAAAGVDQRTLRKRLNYGTFCKDKMITSNIRLVISIAKNYQGAGMNLQ 344

Query: 1181 DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYR 1360
            DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLS+QSRTIRLPFHMVEATYR
Sbjct: 345  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYR 404

Query: 1361 VREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEV 1540
            VR+A KQLY+ENGR+P+  EIAEA GL+MKR  AVML PKAPRSLDQK GI+QSLKPSEV
Sbjct: 405  VRQAEKQLYNENGRHPDYEEIAEATGLSMKRLNAVMLIPKAPRSLDQKIGINQSLKPSEV 464

Query: 1541 IADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGVAMGV 1720
            IADP+A TSEEILIKQ +K+DL+KVL+SL+ REKQVI+WRFGL DG  KTLQEIG  MGV
Sbjct: 465  IADPKAETSEEILIKQFMKQDLNKVLNSLNPREKQVIRWRFGLEDGMTKTLQEIGELMGV 524

Query: 1721 SRERIRQIESCAF 1759
            SRERIRQIES AF
Sbjct: 525  SRERIRQIESNAF 537


>ref|XP_009398609.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 567

 Score =  525 bits (1352), Expect = e-176
 Identities = 300/551 (54%), Positives = 347/551 (62%), Gaps = 14/551 (2%)
 Frame = +2

Query: 149  MASLVPPFNCPSLHQTHTHQAKNRCP-----VSFRIQCISAQMTAVIDFEKTQIPGLDAY 313
            MA LVP F  PS          +  P     V FR +C+ +  TAVIDFE  QIP L+A+
Sbjct: 1    MACLVPQFKPPSSDSLARPSLPSLHPRAREFVCFRSRCVLSPTTAVIDFE--QIPKLEAH 58

Query: 314  SSSR---------FLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXXX 466
            S+S          + G+  PP KT  +ATL  E LL                        
Sbjct: 59   STSSSTCAIRPLTYSGSVGPPIKTSIEATLASETLLQCDEAVIAAAAAEAVALARAALEL 118

Query: 467  XXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEGPI 646
                 QM G   S + ++ E  PS+ D+  LERV L E E  G  N  A  ET P E  +
Sbjct: 119  AKDAAQMIGKNLSAEVEKLEETPSEADIKWLERVSLTETEWAGFTNHPAATETIPFEYNV 178

Query: 647  PPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 826
                     ISS   +E + Q MQ  E I                               
Sbjct: 179  SLDQYASTDISSSTFDEPEFQGMQHIENIAVRSGRQIERRARRARAADKATAGVISLKSG 238

Query: 827  XXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQEELTER 1006
                       EIDYSDPLRYLR                  +GIQ L+KLERLQ++L ER
Sbjct: 239  SSGKKKRSAFQEIDYSDPLRYLRGTTSTSKLLTAAEEIELSEGIQSLLKLERLQQDLAER 298

Query: 1007 NGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQDL 1186
            NG   TFAQWA AAG+D KTLRK++N+G +CKDKMI SNIRLVISIAKN+QGAG+NLQDL
Sbjct: 299  NGCQPTFAQWAAAAGIDQKTLRKRINHGTYCKDKMIKSNIRLVISIAKNYQGAGINLQDL 358

Query: 1187 VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRVR 1366
            VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLPFHMVEATYRVR
Sbjct: 359  VQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRVR 418

Query: 1367 EARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEVIA 1546
            EA+K+LYSENGR+P+N E+AEAAGL+MKR  AVMLTPKAPRSLDQK GI+QSLK SEVIA
Sbjct: 419  EAKKKLYSENGRHPDNEEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGINQSLKASEVIA 478

Query: 1547 DPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGVAMGVSR 1726
            DP A TSE+IL+KQ ++ DL+KVLD+L+ REKQV++WRFGL DGRMKTLQEIG  MGVSR
Sbjct: 479  DPAAKTSEDILMKQFMREDLNKVLDTLNLREKQVVRWRFGLDDGRMKTLQEIGELMGVSR 538

Query: 1727 ERIRQIESCAF 1759
            ERIRQIESCAF
Sbjct: 539  ERIRQIESCAF 549


>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  517 bits (1332), Expect = e-172
 Identities = 302/580 (52%), Positives = 358/580 (61%), Gaps = 26/580 (4%)
 Frame = +2

Query: 149  MASLVPPFNCP----SLH-QTHTHQ--------AKNRCPVSFRIQCISAQMTA-----VI 274
            MA L+P F C     S+H +TH HQ         K R  + FR QCI +  TA     V+
Sbjct: 1    MACLLPQFKCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCILSTTTATMTTTVV 60

Query: 275  DFEKTQIPGLDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXX 433
            D EK ++P L+A+  S        ++GA  PP K  F+ATL  E L+TG           
Sbjct: 61   DDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAAVE 120

Query: 434  XXXXXXXXXXXXXXXXQMKGSEASVKFDR-PENFPSKPDMILLERVRLEEMESLGKANDS 610
                             M  +  S K D+ P + PS+ D    E  +L E+E +   + S
Sbjct: 121  AVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHHS 180

Query: 611  AIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXX 790
               E+ P E      P+++E         L L +MQ S+ I                   
Sbjct: 181  LGAESRPKEDSDYLDPTDEE---------LKLLQMQLSKSIAVRSGRQTERRARRARAAE 231

Query: 791  XXXXXXXXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELI 970
                                   ++DYSDPLRYLR                  +GIQ+L+
Sbjct: 232  KVAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLL 291

Query: 971  KLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAK 1150
            KLE+L EEL ER G   TFAQWA AAG+D KTLRK+LNYG  CKDKMI SNIRLVISIAK
Sbjct: 292  KLEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAK 351

Query: 1151 NFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRL 1330
            N+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRL
Sbjct: 352  NYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRL 411

Query: 1331 PFHMVEATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFG 1510
            PFHMVEATYRVREARKQLYSENGR+P+N E+AEA GL+MKR TAV+LTPKAPRSLDQK G
Sbjct: 412  PFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIG 471

Query: 1511 IDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKT 1690
            I+Q+LKPSEVIADP+A T+EE+L+K+ +K+DL KVLDSL+ REKQVI+WRFGL DGRMKT
Sbjct: 472  INQNLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMKT 531

Query: 1691 LQEIGVAMGVSRERIRQIESCAFXXXXXXXXXXXXXQHLI 1810
            LQEIG  MGVSRERIRQIESCAF             Q+LI
Sbjct: 532  LQEIGELMGVSRERIRQIESCAFRKLKNKKRTKNLQQYLI 571


>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
 emb|CBI40014.3| unnamed protein product, partial [Vitis vinifera]
          Length = 575

 Score =  515 bits (1327), Expect = e-172
 Identities = 291/574 (50%), Positives = 353/574 (61%), Gaps = 20/574 (3%)
 Frame = +2

Query: 149  MASLVPPFNCP----SLHQTHTHQAKNRCPVSFRIQC--------ISAQMTAVIDFEKTQ 292
            M+ L+P F CP    S H      +KNR  + FR+QC        +S   TAV+D EK +
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKLR 60

Query: 293  IPGLDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXX 451
            +P L+++S+S        ++G   PP + +F+ATL RE LLT                  
Sbjct: 61   LPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVALAK 120

Query: 452  XXXXXXXXXXQMKGSEASVKFD-RPENFPSKPDMILLERVRLEEMESLGKANDSAIPETE 628
                      ++ G   S K + +P +F S  D     R++  E E +G   DS   ET 
Sbjct: 121  AAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETG 180

Query: 629  PLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXX 808
             ++       +ED         EL+L E + S+ I                         
Sbjct: 181  MVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGV 240

Query: 809  XXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQ 988
                             E+DYSDPLRYLR                  +GIQ+L+KLE+LQ
Sbjct: 241  VSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQ 300

Query: 989  EELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAG 1168
            E+L ER G   TFAQWA AAGVD KTLR++ NYG  CKDKMI SNIRLVISIAKN+QGAG
Sbjct: 301  EDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAG 360

Query: 1169 MNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVE 1348
            MN+QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVE
Sbjct: 361  MNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420

Query: 1349 ATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLK 1528
            ATYRV+EARKQLYSENGR+P N E+AEA GL+MKR  AV+LTPKAPRSLDQK GI+Q+LK
Sbjct: 421  ATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLK 480

Query: 1529 PSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGV 1708
            PSEVIADP+A T+EE+LIKQ ++ DL KVL+SL+ REKQVI+WR+GL DGR KTLQEIG 
Sbjct: 481  PSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGE 540

Query: 1709 AMGVSRERIRQIESCAFXXXXXXXXXXXXXQHLI 1810
             MGVSRERIRQIESCAF             Q+L+
Sbjct: 541  LMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLV 574


>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
            nucifera]
          Length = 584

 Score =  509 bits (1310), Expect = e-169
 Identities = 291/567 (51%), Positives = 357/567 (62%), Gaps = 30/567 (5%)
 Frame = +2

Query: 149  MASLVPPFNCP----SLH------QTHTHQ------AKNRCPVSFRIQCI-----SAQMT 265
            MA L+P F C     S+H      Q H H       +K+R  +SF+ QC+     +A  T
Sbjct: 1    MACLLPQFKCSPDTISIHFRTHQLQHHKHHHCNNNHSKSRDLLSFQTQCVLSTTTTAMTT 60

Query: 266  AVIDFEKTQIPGLDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXX 424
             ++D EK ++P L+++S S        ++GA  PP K  F+ATL  E L+TG        
Sbjct: 61   TLVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAAA 120

Query: 425  XXXXXXXXXXXXXXXXXXXQMKGSEASVKFDR-PENFPSKPDMILLERVRLEEMESLGKA 601
                                M   ++S + +  P +F S+  +  LE+ +L E + +G+ 
Sbjct: 121  AAEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGRI 180

Query: 602  NDSA-IPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXX 778
            + S  +   +  E  +  S  + +G+ S    E  L +MQ  + I               
Sbjct: 181  DHSVGLESRQEEEQSVQFSNKDSDGLDSS-DEEFKLLQMQLLKSIAVRSGRQTERQARRA 239

Query: 779  XXXXXXXXXXXXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGI 958
                                       +IDYSDPLRYLR                  +GI
Sbjct: 240  RAMEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGI 299

Query: 959  QELIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVI 1138
            Q+L+KLE+L EEL ER G   TFAQWA AAGVD KTLRK+LNYG  CKDKMI SNIRLVI
Sbjct: 300  QDLLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 359

Query: 1139 SIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSR 1318
            SIAKN+QGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSR
Sbjct: 360  SIAKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 419

Query: 1319 TIRLPFHMVEATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLD 1498
            TIRLPFHMVEATYRVREA+KQLYSENGR+P+N E+AEA GL+MKR TAV+LTPKAP SLD
Sbjct: 420  TIRLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLD 479

Query: 1499 QKFGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDG 1678
            QK G++Q +KPSE+IADP+A T+EE+LIKQ +K+DL KVLDSL+ REKQVI+WRFG+ DG
Sbjct: 480  QKIGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDG 539

Query: 1679 RMKTLQEIGVAMGVSRERIRQIESCAF 1759
            RMKTLQEIG  MGVSRERIRQIESCAF
Sbjct: 540  RMKTLQEIGELMGVSRERIRQIESCAF 566


>ref|XP_009408073.1| PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata
            subsp. malaccensis]
          Length = 553

 Score =  504 bits (1298), Expect = e-168
 Identities = 289/552 (52%), Positives = 341/552 (61%), Gaps = 15/552 (2%)
 Frame = +2

Query: 149  MASLVPPFNCPSLHQTHTHQA------KNRCPVSFRIQCISAQMTAVIDFEKTQIPGLDA 310
            MA LVP F  P     H+  +      K R  V  +++C+ +  TA+IDFE  QIP L+A
Sbjct: 1    MACLVPQFKPPPTSDAHSRLSLPSLHPKARESVWSQVRCVLSPKTALIDFE--QIPKLEA 58

Query: 311  YSSS---------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXXXXX 463
             S+S          + GA   P KT F+AT   E LLT                      
Sbjct: 59   RSTSLSTCAIKPLTYTGAVGLPTKTSFEATWASEALLTNEEAVIAAAAAEAVALARAALE 118

Query: 464  XXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPLEGP 643
                  QM     S +               +E V L + E  G  N S   ET  LE  
Sbjct: 119  LAKDAAQMIRKSPSAE---------------VENVNLSKTEWTGMTNHSVATETTSLEDS 163

Query: 644  IPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 823
            +    S  + ISS  +NE +++E +    I                              
Sbjct: 164  VTLDESVRKDISSSTYNETEVEETEYCGNIAVRSGRQTERRARRARAAEKAAAGVLNLKS 223

Query: 824  XXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQEELTE 1003
                        EIDYSDPL YLR                  +GIQ+L+KLERLQ++LTE
Sbjct: 224  GSSGKKKRSTLQEIDYSDPLHYLRGTTSTSRLLTAAEEVELSEGIQDLLKLERLQQDLTE 283

Query: 1004 RNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMNLQD 1183
            RNG   TFAQWA AAG+D K LRK+LNYG  CKDKMI SNIRLVISIAKN+Q AGMNLQD
Sbjct: 284  RNGCQPTFAQWAAAAGIDQKVLRKRLNYGTFCKDKMITSNIRLVISIAKNYQHAGMNLQD 343

Query: 1184 LVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEATYRV 1363
            LVQEGCRGL+KGAEKFDASKGFKFSTYAHWWIKQAVR+SLS+QSRTIRLPFHMVEATYRV
Sbjct: 344  LVQEGCRGLIKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSEQSRTIRLPFHMVEATYRV 403

Query: 1364 REARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPSEVI 1543
            REA+KQLYSENGR+P++ E+AEA+GL+MKRF AVMLTPKAPRSLDQK GI+Q+LKPSEVI
Sbjct: 404  REAKKQLYSENGRHPDHEEVAEASGLSMKRFAAVMLTPKAPRSLDQKIGINQTLKPSEVI 463

Query: 1544 ADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGVAMGVS 1723
            ADP+A TSE+ILIKQ ++ DL+KVLD+L+ REK+V++WRFGL DGRMKTLQEIG  MGVS
Sbjct: 464  ADPDAETSEDILIKQFMREDLNKVLDTLNPREKRVVRWRFGLEDGRMKTLQEIGELMGVS 523

Query: 1724 RERIRQIESCAF 1759
            RERIRQIE CAF
Sbjct: 524  RERIRQIEFCAF 535


>ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Theobroma
            cacao]
          Length = 579

 Score =  503 bits (1295), Expect = e-167
 Identities = 284/558 (50%), Positives = 338/558 (60%), Gaps = 21/558 (3%)
 Frame = +2

Query: 149  MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI--------SAQMTAVIDFEK 286
            M+ L+P F C            H+H +K++  + FR QC+        S   TAV+D EK
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHSKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEK 60

Query: 287  TQIPGLDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXX 445
             ++P  +A+ +S        ++GA  PP++    ATL  + LLT                
Sbjct: 61   LRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAIIAAAAAEAVAL 120

Query: 446  XXXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPET 625
                         M  +    K +         D    +     E E  G   DS   E+
Sbjct: 121  ARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGIIGDSPTDES 180

Query: 626  EPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXX 805
            E  E     + + +       + EL+  E Q S  I                        
Sbjct: 181  EMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAAN 240

Query: 806  XXXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERL 985
                              ++DYSDPLRYLR                  +GIQ+L+KLERL
Sbjct: 241  VVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERL 300

Query: 986  QEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGA 1165
            QEEL ER G   TFAQWA AAGVD KTLR +LNYG HCKDKMI SNIRLVISIAKN+QGA
Sbjct: 301  QEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGA 360

Query: 1166 GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMV 1345
            GMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMV
Sbjct: 361  GMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 420

Query: 1346 EATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSL 1525
            EATYRV+EARKQLYSENGR+P+N E+AEA GL+MKR TAV+LTPKAPRSLDQK GI+Q+L
Sbjct: 421  EATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNL 480

Query: 1526 KPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIG 1705
            KPSEVIADPEA T+E++LIKQ +++DL KVLDSLS RE+QVI+WRFG+ DGRMKTLQEIG
Sbjct: 481  KPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIG 540

Query: 1706 VAMGVSRERIRQIESCAF 1759
              MGVSRERIRQIESCAF
Sbjct: 541  ELMGVSRERIRQIESCAF 558


>ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania umbratica]
          Length = 579

 Score =  502 bits (1293), Expect = e-167
 Identities = 284/558 (50%), Positives = 338/558 (60%), Gaps = 21/558 (3%)
 Frame = +2

Query: 149  MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI--------SAQMTAVIDFEK 286
            M+ L+P F C            H+H +K++  + FR QC+        SA  TAV+D EK
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHSKHKEHICFRTQCVLSTTSSSTSAMTTAVLDVEK 60

Query: 287  TQIPGLDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXX 445
             ++P  +A+ +S        ++GA  PP++    ATL  E LLT                
Sbjct: 61   LRLPSFEAHPNSVAADRPWTYIGATGPPSEASLAATLATENLLTSDEAVIAAAAAESVAL 120

Query: 446  XXXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPET 625
                         M  +    K +      S  D    +     E E  G   DS   E+
Sbjct: 121  ARAAVKVAKDAALMAKNYNYAKTEMKSGVSSATDTFTSKWALFTEAERAGIIGDSPTDES 180

Query: 626  EPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXX 805
            E  E     + + +       + EL+L E Q S  I                        
Sbjct: 181  EMEEDDSEQNATTESDELEPTNEELELLEEQLSRSIIVRSRRQTERKAKRTRAAEKAAVN 240

Query: 806  XXXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERL 985
                              ++DYSDPL YLR                  +GIQ+L+KLERL
Sbjct: 241  VVSVKSGSTNRKKRGALQDVDYSDPLHYLRVTTSTSRLLTANEELELSEGIQDLLKLERL 300

Query: 986  QEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGA 1165
            QEEL ER G   TFAQWA AAGVD KTLR +LNYG  CKDKMI SNIRLVISIAKN+QGA
Sbjct: 301  QEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVLCKDKMIKSNIRLVISIAKNYQGA 360

Query: 1166 GMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMV 1345
            GMNLQDLVQEGCRGL++GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMV
Sbjct: 361  GMNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 420

Query: 1346 EATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSL 1525
            EATYRVREARK LYSENGR+P+N E+A+A GL+MKR TAV+LTPKAPRSLDQK GI+Q+L
Sbjct: 421  EATYRVREARKHLYSENGRHPDNEEVAKATGLSMKRLTAVLLTPKAPRSLDQKIGINQNL 480

Query: 1526 KPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIG 1705
            KPSEVIADPEA T+E++LIKQ +++DL KVLDSLS RE+QVI+WRFG+ DGRMKTLQEIG
Sbjct: 481  KPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIG 540

Query: 1706 VAMGVSRERIRQIESCAF 1759
              MGVSRERIRQIESCAF
Sbjct: 541  ELMGVSRERIRQIESCAF 558


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis]
 gb|KCW76739.1| hypothetical protein EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  500 bits (1288), Expect = e-166
 Identities = 286/560 (51%), Positives = 336/560 (60%), Gaps = 20/560 (3%)
 Frame = +2

Query: 140  QEKMASLVPPFNC-PSLH--QTHTHQAKNRCPVSFRIQCI----------SAQMTAVIDF 280
            Q   + L+P F C P     Q  TH  KNR    FR QC+          SA    V+D 
Sbjct: 11   QRMSSCLLPQFKCQPDTFSIQFRTHAQKNRETTYFRAQCLLSATSPSTLSSAATAVVLDM 70

Query: 281  EKTQIPGLDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXX 439
            EK ++P L+  + S        + GA  PPA+ +  ATL  E LLT              
Sbjct: 71   EKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAASEAV 130

Query: 440  XXXXXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIP 619
                           M  +E+S   D      S+    L +   L E+E      +   P
Sbjct: 131  TLAKAALKSAKHAALMIRNESSSNIDNKLELSSRTSTSLSKHAELLELEHSNILTELMEP 190

Query: 620  ETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXX 799
            E    EG +    ++        H EL L ++Q  + I                      
Sbjct: 191  EGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAA 250

Query: 800  XXXXXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLE 979
                                E+DYSDPLRYLR                  +GIQ+L+KLE
Sbjct: 251  ANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLE 310

Query: 980  RLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQ 1159
            RLQ ELTER G    FAQWA AAGVD KTLRK+LNYG+ CKDKMI SNIRLVISIAKN+Q
Sbjct: 311  RLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQ 370

Query: 1160 GAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFH 1339
            GAGMNLQDLVQEGCRGLV+G EKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFH
Sbjct: 371  GAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH 430

Query: 1340 MVEATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQ 1519
            MVEATYRV+EARKQLYSENGR P+N E+AEA GL+MKR  AV++TPKAPRSLDQK GI+Q
Sbjct: 431  MVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQ 490

Query: 1520 SLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQE 1699
            +LKPSEVIADP A TSE++L+KQ +++DL KVLD+L+ REKQV++WRFGL DGRMKTLQE
Sbjct: 491  NLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQE 550

Query: 1700 IGVAMGVSRERIRQIESCAF 1759
            IG  MGVSRERIRQIESCAF
Sbjct: 551  IGELMGVSRERIRQIESCAF 570


>ref|XP_017627350.1| PREDICTED: RNA polymerase sigma factor sigB [Gossypium arboreum]
 gb|KHG18437.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 578

 Score =  498 bits (1281), Expect = e-165
 Identities = 284/557 (50%), Positives = 338/557 (60%), Gaps = 20/557 (3%)
 Frame = +2

Query: 149  MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI-------SAQMTAVIDFEKT 289
            M+ L+P F C            H+H +K++  + FR QC+       S   TAV+D EK 
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRAHHSHHSKHKESICFRSQCVLSTTSSTSTATTAVLDVEKL 60

Query: 290  QIPGLDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXX 448
            ++P  +A+S+S        + GA  PP++  F ATL  E LLT                 
Sbjct: 61   RLPSFEAHSNSVVTDRPWTYTGATGPPSEASFGATLATENLLTSDEAVIAAAAAEAVALA 120

Query: 449  XXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETE 628
                        M  + +S K +      S  D +  +     E E  G   D    E E
Sbjct: 121  RAAAKVAKDAAIMVKNHSSAKTEMKSPGSSATDTLTSKWGLFTEAERAGIVGDYVSDELE 180

Query: 629  PLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXX 808
              E     + +++       + EL L E Q S  I                         
Sbjct: 181  MEEDDFEQNSTKESDELEPTNEELKLLEEQLSRSIAVRSNRQPERKAKRTRAAEKAATNV 240

Query: 809  XXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQ 988
                             +IDYSDPLRYLR                  +GIQ+L+KLE L 
Sbjct: 241  VSVKSGSTNRKRRGALQDIDYSDPLRYLRGTTNTSKLLTANEELELSEGIQDLLKLEVLH 300

Query: 989  EELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAG 1168
            EEL ER G P TFAQWA AA VD KTLR++LNYG  CKDKMI SNIRLVISIAKN+QGAG
Sbjct: 301  EELAERCGRPPTFAQWAAAAEVDRKTLRERLNYGTICKDKMIKSNIRLVISIAKNYQGAG 360

Query: 1169 MNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVE 1348
            MNLQDLVQEGCRGL++GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVE
Sbjct: 361  MNLQDLVQEGCRGLIRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420

Query: 1349 ATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLK 1528
            ATYRV+EARKQLYSENGR P+N E+AEA GL+MKR TAV+L PKAPRSLDQK GI+Q+LK
Sbjct: 421  ATYRVKEARKQLYSENGRQPDNIEVAEATGLSMKRLTAVLLAPKAPRSLDQKIGINQNLK 480

Query: 1529 PSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGV 1708
            PSEVIADPEA ++E+IL+KQ +K+DL KVLDSLS RE+QVI+WRFG+ DGRMKTLQEIG 
Sbjct: 481  PSEVIADPEADSAEDILLKQFMKKDLEKVLDSLSPRERQVIRWRFGMEDGRMKTLQEIGE 540

Query: 1709 AMGVSRERIRQIESCAF 1759
            +MGVSRERIRQIE CAF
Sbjct: 541  SMGVSRERIRQIELCAF 557


>ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Theobroma
            cacao]
          Length = 586

 Score =  496 bits (1278), Expect = e-164
 Identities = 284/565 (50%), Positives = 338/565 (59%), Gaps = 28/565 (4%)
 Frame = +2

Query: 149  MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI--------SAQMTAVIDFEK 286
            M+ L+P F C            H+H +K++  + FR QC+        S   TAV+D EK
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHSKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEK 60

Query: 287  TQIPGLDAYSSS-------RFLGAFSPPA-------KTDFKATLPREVLLTGXXXXXXXX 424
             ++P  +A+ +S        ++GA  PP+       +    ATL  + LLT         
Sbjct: 61   LRLPSFEAHPNSVAVDRPWTYIGATGPPSEVSLLRLRASLGATLATDNLLTSDEAIIAAA 120

Query: 425  XXXXXXXXXXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKAN 604
                                M  +    K +         D    +     E E  G   
Sbjct: 121  AAEAVALARAAVKVAKDAALMAENYNYAKTEMKSGVSFATDSFTSKWALFTEAERAGIIG 180

Query: 605  DSAIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXX 784
            DS   E+E  E     + + +       + EL+  E Q S  I                 
Sbjct: 181  DSPTDESEMEEDDSEQNSTTESDELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTRA 240

Query: 785  XXXXXXXXXXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQE 964
                                     ++DYSDPLRYLR                  +GIQ+
Sbjct: 241  AEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQD 300

Query: 965  LIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISI 1144
            L+KLERLQEEL ER G   TFAQWA AAGVD KTLR +LNYG HCKDKMI SNIRLVISI
Sbjct: 301  LLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISI 360

Query: 1145 AKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTI 1324
            AKN+QGAGMNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTI
Sbjct: 361  AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 420

Query: 1325 RLPFHMVEATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQK 1504
            RLPFHMVEATYRV+EARKQLYSENGR+P+N E+AEA GL+MKR TAV+LTPKAPRSLDQK
Sbjct: 421  RLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQK 480

Query: 1505 FGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRM 1684
             GI+Q+LKPSEVIADPEA T+E++LIKQ +++DL KVLDSLS RE+QVI+WRFG+ DGRM
Sbjct: 481  IGINQNLKPSEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRM 540

Query: 1685 KTLQEIGVAMGVSRERIRQIESCAF 1759
            KTLQEIG  MGVSRERIRQIESCAF
Sbjct: 541  KTLQEIGELMGVSRERIRQIESCAF 565


>gb|OMP03365.1| RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 576

 Score =  494 bits (1272), Expect = e-163
 Identities = 284/574 (49%), Positives = 341/574 (59%), Gaps = 20/574 (3%)
 Frame = +2

Query: 149  MASLVPPFNCP------SLHQTHTHQAKNRCPVSFRIQCI--------SAQMTAVIDFEK 286
            M+ L+P F C            H+H +K++  + FR QC+        S   TAV+D EK
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHSHHSKHKESICFRTQCVLSTSSPSTSTATTAVLDLEK 60

Query: 287  TQIPGLDAYSSSR------FLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXX 448
             ++P  +A  +S       + GA  PP++  F A+L  E LL                  
Sbjct: 61   LRLPSFEAQPNSVVADRPWYRGATGPPSEASFGASLTTENLLKSDDAVIASAAAEAVALA 120

Query: 449  XXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETE 628
                        M  S  S K +      S  D +  +     E E  G   DS   E++
Sbjct: 121  RAAVKVAKDAALMAKSFNSSKIEMKSTVSSATDTLTSKWALFTEAERAGIVGDSPTNESD 180

Query: 629  PLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXX 808
              +     +   D+      + EL+  E Q S  I                         
Sbjct: 181  EDDSEEKSTTESDK--LEPTNEELEYLEEQLSRSIAVRSRRQTERKAKRTRAAEKASSNA 238

Query: 809  XXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQ 988
                             E+DYSDPLRYLR                  +GIQ+L+KLERL+
Sbjct: 239  VSLRSGSNSRKKRGALQEVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLE 298

Query: 989  EELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAG 1168
            EEL ER G   TF+QWA AAGVD KTLR++LNYG  CKDKMI SNIRLVISIAKN+QGAG
Sbjct: 299  EELRERCGGQPTFSQWAAAAGVDQKTLRRRLNYGILCKDKMIKSNIRLVISIAKNYQGAG 358

Query: 1169 MNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVE 1348
            MNLQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVE
Sbjct: 359  MNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 418

Query: 1349 ATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLK 1528
            ATYRV+EA+KQLYSENGR+P+N E+AEA GL+MKR  AV+LTPKAPRSLDQK GI+Q+LK
Sbjct: 419  ATYRVKEAKKQLYSENGRHPDNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKIGINQNLK 478

Query: 1529 PSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGV 1708
            PSEVIADPEA T+E+IL+KQ +K+DL KVLDSL  RE+QVI+WRFG+ DGRMKTLQEIG 
Sbjct: 479  PSEVIADPEADTAEDILLKQFMKKDLEKVLDSLGQRERQVIRWRFGMEDGRMKTLQEIGE 538

Query: 1709 AMGVSRERIRQIESCAFXXXXXXXXXXXXXQHLI 1810
             MGVSRERIRQIESCAF             Q+L+
Sbjct: 539  LMGVSRERIRQIESCAFRKMKNKKRTKNLQQYLV 572


>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
            grandis]
          Length = 601

 Score =  493 bits (1269), Expect = e-163
 Identities = 282/557 (50%), Positives = 332/557 (59%), Gaps = 25/557 (4%)
 Frame = +2

Query: 164  PPFNCPSLHQTHTHQ--------AKNRCPVSFRIQCI----------SAQMTAVIDFEKT 289
            P    P+ H  H+ Q         KNR    FR QC+          SA    V+D EK 
Sbjct: 27   PAVQVPAGHLLHSVQDARPNCFAEKNRETTYFRAQCLLSATSPSTLSSAATAVVLDMEKL 86

Query: 290  QIPGLDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXX 448
            ++P L+  + S        + GA  PPA+ +  ATL  E LLT                 
Sbjct: 87   RLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLA 146

Query: 449  XXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETE 628
                        M  +E+S   D      S+    L +   L E+E      +   PE  
Sbjct: 147  KAALKSAKHAALMIRNESSSNIDNKLELSSRTSTSLSKHAELLELEHSNILTELMEPEGG 206

Query: 629  PLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXX 808
              EG +    ++        H EL L ++Q  + I                         
Sbjct: 207  LREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANV 266

Query: 809  XXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQ 988
                             E+DYSDPLRYLR                  +GIQ+L+KLERLQ
Sbjct: 267  VSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQ 326

Query: 989  EELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAG 1168
             ELTER G    FAQWA AAGVD KTLRK+LNYG+ CKDKMI SNIRLVISIAKN+QGAG
Sbjct: 327  VELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAG 386

Query: 1169 MNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVE 1348
            MNLQDLVQEGCRGLV+G EKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVE
Sbjct: 387  MNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 446

Query: 1349 ATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLK 1528
            ATYRV+EARKQLYSENGR P+N E+AEA GL+MKR  AV++TPKAPRSLDQK GI+Q+LK
Sbjct: 447  ATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLK 506

Query: 1529 PSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGV 1708
            PSEVIADP A TSE++L+KQ +++DL KVLD+L+ REKQV++WRFGL DGRMKTLQEIG 
Sbjct: 507  PSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGE 566

Query: 1709 AMGVSRERIRQIESCAF 1759
             MGVSRERIRQIESCAF
Sbjct: 567  LMGVSRERIRQIESCAF 583


>ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
          Length = 573

 Score =  490 bits (1262), Expect = e-162
 Identities = 284/572 (49%), Positives = 345/572 (60%), Gaps = 18/572 (3%)
 Frame = +2

Query: 149  MASLVPPFNC-PSLHQTH--THQAKNRCPVSFRIQCI--------SAQMTAVIDFEKTQI 295
            M+ L+P F C P     H  TH  K R  +S    CI        S   T V++ EK ++
Sbjct: 1    MSCLLPQFKCQPDTFSIHFRTHLPKPRDSISSWPHCILSTSSPSTSMATTTVLNLEKLRL 60

Query: 296  PGLDAYSSS-------RFLGAFSPPAKTDFKATLPREVLLTGXXXXXXXXXXXXXXXXXX 454
            P LDA S S        + GA  PPAK + +ATL  E LLT                   
Sbjct: 61   PSLDANSDSVTANRPWTYTGAIGPPAKANLEATLATETLLTSEEAVIAAAAAEAVTLAKA 120

Query: 455  XXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGKANDSAIPETEPL 634
                      +  +    + +    F  + D + L+  +  +     +  DS  P+T  L
Sbjct: 121  AVKVAKDATLLINNNPCTRAESTSLFSPEDDALHLKWPQHMKTGQPVRLGDSMGPKTAQL 180

Query: 635  EGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXXXXXXXXXXXXXX 814
            +        ++       H EL+L + Q S  I                           
Sbjct: 181  DDYSMQCAIKEADDLEPTHEELELLQSQLSNGIAVRSRRQTERKARRTRAAEKAAATVVS 240

Query: 815  XXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGIQELIKLERLQEE 994
                           +ID+SDPLRYLR                  +GIQ+L+KLE+LQEE
Sbjct: 241  VKSGSTVRKKRASLQDIDHSDPLRYLRATTSTSRLLTATEEIELSEGIQDLLKLEKLQEE 300

Query: 995  LTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVISIAKNFQGAGMN 1174
            LTER GS  TFAQWA AAGVD KTLR+++NYG  CKDKMI SNIRLVISIAKN+QGAGMN
Sbjct: 301  LTERCGSQPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNIRLVISIAKNYQGAGMN 360

Query: 1175 LQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSRTIRLPFHMVEAT 1354
            LQDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSRTIRLPFHMVEAT
Sbjct: 361  LQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEAT 420

Query: 1355 YRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLDQKFGIDQSLKPS 1534
            YRV+EARKQLYS+NGR+P++ E+AEA GL+MKR  AV+LTPKAPRSL+QK GI+Q+LKPS
Sbjct: 421  YRVKEARKQLYSKNGRHPDDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPS 480

Query: 1535 EVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDGRMKTLQEIGVAM 1714
            EVIADP+A TSE++LI++ +K+DL KVLDSL+ REKQVI+WRFG+ DGRMKTLQEIG  M
Sbjct: 481  EVIADPDAETSEDVLIRKFMKQDLDKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELM 540

Query: 1715 GVSRERIRQIESCAFXXXXXXXXXXXXXQHLI 1810
            GVSRERIRQIESCAF             Q+L+
Sbjct: 541  GVSRERIRQIESCAFRKLKNKKRTKHLQQYLV 572


>ref|XP_018817643.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Juglans
            regia]
          Length = 585

 Score =  487 bits (1254), Expect = e-161
 Identities = 283/585 (48%), Positives = 348/585 (59%), Gaps = 30/585 (5%)
 Frame = +2

Query: 149  MASLVPPFNCP-------------SLHQTHTH--QAKNRCPVSFRIQCI--------SAQ 259
            M+ L+P F C              S+  TH+H    K+R  +  R QCI        S  
Sbjct: 1    MSCLLPQFKCHPDTFSIQFRTHQHSVSTTHSHPQNEKSRDRIDIRAQCILSTTSFSTSIG 60

Query: 260  MTAVIDFEKTQIPGL----DAYSSSR---FLGAFSPPAKTDFKATLPREVLLTGXXXXXX 418
             TAV++  K ++P L    D +++++   ++GA  PP +  F+ATL  E L+T       
Sbjct: 61   STAVLNMGKLRLPSLETDSDPFTTNKPWTYMGAVGPPTEAKFEATLATETLITSEEAVIA 120

Query: 419  XXXXXXXXXXXXXXXXXXXXXQMKGSEASVKFDRPENFPSKPDMILLERVRLEEMESLGK 598
                                  +  +  S K D   +   + D++    V+  + +    
Sbjct: 121  AAAAEAVTLAKAAVKFAKDAAMLVNNNHSEKADTRSSVSFEADVLHFNWVQPVKTDRAAI 180

Query: 599  ANDSAIPETEPLEGPIPPSPSEDEGISSLLHNELDLQEMQDSECIXXXXXXXXXXXXXXX 778
              D   PE   LE       +++         ELDL + Q S+                 
Sbjct: 181  VGDPRGPEAGLLENHSMQHATKESDDLEPTDKELDLVQEQLSKSPAVRSRRQTERKAKRA 240

Query: 779  XXXXXXXXXXXXXXXXXXXXXXXXXXHEIDYSDPLRYLRXXXXXXXXXXXXXXXXXXQGI 958
                                       +IDYSDPLRYLR                  +GI
Sbjct: 241  KAAEKAAANVVSVKPGSTSRKKRVSLQDIDYSDPLRYLRATTSTSKLLTSTEELELSEGI 300

Query: 959  QELIKLERLQEELTERNGSPSTFAQWATAAGVDSKTLRKKLNYGKHCKDKMIISNIRLVI 1138
            Q+L+KLE+L EEL ER GS   FAQWA AAGVD KTLRK+LNYG  CKDKMI SNIRLVI
Sbjct: 301  QDLLKLEKLHEELAERCGSQPAFAQWAAAAGVDQKTLRKRLNYGTLCKDKMIKSNIRLVI 360

Query: 1139 SIAKNFQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSDQSR 1318
            SIAKN+QGAGMNL+DLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVR+SLSDQSR
Sbjct: 361  SIAKNYQGAGMNLEDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSR 420

Query: 1319 TIRLPFHMVEATYRVREARKQLYSENGRYPENAEIAEAAGLTMKRFTAVMLTPKAPRSLD 1498
            TIRLPFHMVEATYRV+EARKQLYSENGR P++ EIAEA GL+MKR TAV+LTPKAPRSL+
Sbjct: 421  TIRLPFHMVEATYRVKEARKQLYSENGRQPDDVEIAEATGLSMKRLTAVLLTPKAPRSLE 480

Query: 1499 QKFGIDQSLKPSEVIADPEASTSEEILIKQIVKRDLHKVLDSLSAREKQVIKWRFGLGDG 1678
            QK GI+Q+LKPSEVIADP+A T+EE+L+KQ +K+DL  VLDSL+ RE+QVI+WRFG+ DG
Sbjct: 481  QKIGINQNLKPSEVIADPDAETAEELLMKQFMKQDLENVLDSLNPRERQVIRWRFGMEDG 540

Query: 1679 RMKTLQEIGVAMGVSRERIRQIESCAFXXXXXXXXXXXXXQHLIP 1813
            RMKTLQEIG +MGVSRERIRQIESCAF             Q+L+P
Sbjct: 541  RMKTLQEIGESMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLLP 585