BLASTX nr result
ID: Ophiopogon27_contig00003312
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00003312
(600 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020271664.1| glycine-rich RNA-binding protein 4, mitochon... 125 9e-33
ref|XP_010938765.1| PREDICTED: multiple RNA-binding domain-conta... 120 1e-30
gb|PKU70347.1| Glycine-rich RNA-binding protein 4, mitochondrial... 105 2e-25
ref|XP_020589585.1| glycine-rich RNA-binding protein 2, mitochon... 105 2e-25
ref|XP_010278458.1| PREDICTED: glycine-rich RNA-binding protein ... 101 1e-23
ref|XP_009417918.1| PREDICTED: multiple RNA-binding domain-conta... 100 5e-23
gb|ONK62832.1| uncharacterized protein A4U43_C07F8590 [Asparagus... 94 9e-22
ref|XP_020702097.1| glycine-rich RNA-binding protein 4, mitochon... 97 1e-21
gb|ERN12363.1| hypothetical protein AMTR_s00025p00095750 [Ambore... 89 2e-19
ref|XP_020526829.1| probable splicing factor, arginine/serine-ri... 89 5e-19
ref|XP_006584061.1| PREDICTED: glycine-rich RNA-binding protein ... 89 7e-19
ref|XP_021688941.1| uncharacterized protein LOC110670929 isoform... 88 3e-18
ref|XP_021688940.1| organelle RRM domain-containing protein 2, m... 86 2e-17
ref|XP_019267010.1| PREDICTED: RNA-binding motif protein, Y chro... 85 3e-17
ref|XP_016466408.1| PREDICTED: RNA-binding motif protein, Y chro... 85 4e-17
ref|XP_009799682.1| PREDICTED: nuclear cap-binding protein subun... 84 5e-17
ref|XP_020227066.1| glycine-rich RNA-binding protein 4, mitochon... 84 6e-17
ref|XP_009617118.1| PREDICTED: RNA-binding motif protein, Y chro... 83 1e-16
ref|XP_023881738.1| organelle RRM domain-containing protein 6, c... 83 2e-16
ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chro... 83 2e-16
>ref|XP_020271664.1| glycine-rich RNA-binding protein 4, mitochondrial-like [Asparagus
officinalis]
Length = 199
Score = 125 bits (315), Expect = 9e-33
Identities = 67/92 (72%), Positives = 70/92 (76%), Gaps = 7/92 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDI-------SKXXXXXXGLAYIWFAREGDALLAVKEM 202
IFIKGLS STSEG LVK+FS FGDI SK GLAYIWFA E DAL +VKEM
Sbjct: 108 IFIKGLSRSTSEGVLVKIFSTFGDIRKVKVITSKGSKESLGLAYIWFAHEEDALSSVKEM 167
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRFR 298
DGKFVDGRFIAVMMARPE PSKQVR PY+FR
Sbjct: 168 DGKFVDGRFIAVMMARPEGPSKQVRALPYKFR 199
>ref|XP_010938765.1| PREDICTED: multiple RNA-binding domain-containing protein 1 [Elaeis
guineensis]
Length = 207
Score = 120 bits (302), Expect = 1e-30
Identities = 62/91 (68%), Positives = 69/91 (75%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS-------KXXXXXXGLAYIWFAREGDALLAVKEM 202
IFI+GLSC+TSEG L K+FSCFG++S K GLAYIWFA E DA AVKEM
Sbjct: 117 IFIRGLSCTTSEGYLAKIFSCFGEVSRVKIVTSKTSKESLGLAYIWFACEQDAQQAVKEM 176
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
DGKFVDGRFIAVMMA+PE+ SKQVR PYRF
Sbjct: 177 DGKFVDGRFIAVMMAKPESRSKQVRAIPYRF 207
>gb|PKU70347.1| Glycine-rich RNA-binding protein 4, mitochondrial [Dendrobium
catenatum]
Length = 167
Score = 105 bits (263), Expect = 2e-25
Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDI-------SKXXXXXXGLAYIWFAREGDALLAVKEM 202
IF+KGLS STSEG L+K FS FG+I S+ G+AYIWFA LA+KEM
Sbjct: 77 IFVKGLSRSTSEGYLLKQFSQFGEIRKVKIITSRGSKESLGMAYIWFACTESTKLAIKEM 136
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
+GKFVDGRFIAVMM+RPEAP+KQV+ PYRF
Sbjct: 137 NGKFVDGRFIAVMMSRPEAPTKQVKFMPYRF 167
>ref|XP_020589585.1| glycine-rich RNA-binding protein 2, mitochondrial-like isoform X1
[Phalaenopsis equestris]
Length = 167
Score = 105 bits (263), Expect = 2e-25
Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDISKXXXXXX-------GLAYIWFAREGDALLAVKEM 202
IF+KGLS STSEGCL+K FS FG+ISK G+AY+WFA A LA+KEM
Sbjct: 77 IFVKGLSRSTSEGCLLKQFSQFGEISKVKIVTSRGAKESLGMAYVWFACTESAELAIKEM 136
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
+GKF DGRFIAV M+RPEAP+K V+ PYRF
Sbjct: 137 NGKFFDGRFIAVTMSRPEAPTKHVKFMPYRF 167
>ref|XP_010278458.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X1 [Nelumbo nucifera]
Length = 161
Score = 101 bits (251), Expect = 1e-23
Identities = 51/91 (56%), Positives = 62/91 (68%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDISKXXXXXX-------GLAYIWFAREGDALLAVKEM 202
IFIKGL S SEGCL+K FSC+G++ K GLAY+WFA E A LAV EM
Sbjct: 71 IFIKGLPLSMSEGCLMKSFSCYGEVRKVKIITDRKSRQSLGLAYVWFASEESAQLAVAEM 130
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
DGKF GRFIAV +A+PE+P+ +VRT Y+F
Sbjct: 131 DGKFFGGRFIAVTIAKPESPTSKVRTVSYKF 161
>ref|XP_009417918.1| PREDICTED: multiple RNA-binding domain-containing protein 1 [Musa
acuminata subsp. malaccensis]
Length = 173
Score = 100 bits (248), Expect = 5e-23
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 7/83 (8%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDI-------SKXXXXXXGLAYIWFAREGDALLAVKEM 202
IFIKGLS STSEG L K FS FG++ SK GLAYIWFARE DAL+AVKEM
Sbjct: 79 IFIKGLSRSTSEGFLAKTFSSFGEVKKITIITSKSSKQSLGLAYIWFAREQDALMAVKEM 138
Query: 203 DGKFVDGRFIAVMMARPEAPSKQ 271
+GKF+DGRF+AV +A E+PSKQ
Sbjct: 139 NGKFLDGRFVAVTIAEAESPSKQ 161
>gb|ONK62832.1| uncharacterized protein A4U43_C07F8590 [Asparagus officinalis]
Length = 92
Score = 94.4 bits (233), Expect = 9e-22
Identities = 46/60 (76%), Positives = 48/60 (80%)
Frame = +2
Query: 119 SKXXXXXXGLAYIWFAREGDALLAVKEMDGKFVDGRFIAVMMARPEAPSKQVRTTPYRFR 298
SK GLAYIWFA E DAL +VKEMDGKFVDGRFIAVMMARPE PSKQVR PY+FR
Sbjct: 33 SKGSKESLGLAYIWFAHEEDALSSVKEMDGKFVDGRFIAVMMARPEGPSKQVRALPYKFR 92
>ref|XP_020702097.1| glycine-rich RNA-binding protein 4, mitochondrial-like isoform X1
[Dendrobium catenatum]
Length = 177
Score = 96.7 bits (239), Expect = 1e-21
Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 7/84 (8%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDI-------SKXXXXXXGLAYIWFAREGDALLAVKEM 202
IF+KGLS STSEG L+K FS FG+I S+ G+AYIWFA LA+KEM
Sbjct: 77 IFVKGLSRSTSEGYLLKQFSQFGEIRKVKIITSRGSKESLGMAYIWFACTESTKLAIKEM 136
Query: 203 DGKFVDGRFIAVMMARPEAPSKQV 274
+GKFVDGRFIAVMM+RPEAP+KQV
Sbjct: 137 NGKFVDGRFIAVMMSRPEAPTKQV 160
>gb|ERN12363.1| hypothetical protein AMTR_s00025p00095750 [Amborella trichopoda]
Length = 121
Score = 89.4 bits (220), Expect = 2e-19
Identities = 48/91 (52%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDISKXXXXXX-------GLAYIWFAREGDALLAVKEM 202
+FIKGLS ST+EG L FS FG + + G AYIWF E DA LAVK+M
Sbjct: 31 VFIKGLSLSTTEGYLTNAFSQFGKVDRVKVVTDRASKQSLGFAYIWFTCEEDAKLAVKKM 90
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
DGKF DGRF+ V MA PE S + + TPYRF
Sbjct: 91 DGKFFDGRFVHVTMAWPETLSNKRKATPYRF 121
>ref|XP_020526829.1| probable splicing factor, arginine/serine-rich 4 isoform X1
[Amborella trichopoda]
Length = 163
Score = 89.4 bits (220), Expect = 5e-19
Identities = 48/91 (52%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDISKXXXXXX-------GLAYIWFAREGDALLAVKEM 202
+FIKGLS ST+EG L FS FG + + G AYIWF E DA LAVK+M
Sbjct: 73 VFIKGLSLSTTEGYLTNAFSQFGKVDRVKVVTDRASKQSLGFAYIWFTCEEDAKLAVKKM 132
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
DGKF DGRF+ V MA PE S + + TPYRF
Sbjct: 133 DGKFFDGRFVHVTMAWPETLSNKRKATPYRF 163
>ref|XP_006584061.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Glycine max]
gb|KRH51016.1| hypothetical protein GLYMA_07G256600 [Glycine max]
Length = 157
Score = 89.0 bits (219), Expect = 7e-19
Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS-------KXXXXXXGLAYIWFAREGDALLAVKEM 202
IF+KGL STSEG L+KVFS FGD++ + G AYIWF +E A LAV+EM
Sbjct: 67 IFVKGLPLSTSEGRLMKVFSEFGDVTLVQLPIDRESGQSLGFAYIWFVKEESAQLAVQEM 126
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
+GKF DGRFI V +A+P + RTT Y+F
Sbjct: 127 NGKFFDGRFIYVTIAKPGSSKSSKRTTAYKF 157
>ref|XP_021688941.1| uncharacterized protein LOC110670929 isoform X2 [Hevea
brasiliensis]
Length = 186
Score = 88.2 bits (217), Expect = 3e-18
Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS--KXXXXXXGLAYIWFAREGDALLAVKEMDGKFV 217
+FIKGL+ STSEG L K FS FG++S K G A++WF E A LAVKEMDGKF
Sbjct: 101 VFIKGLALSTSEGSLKKAFSQFGEVSRNKKTKQSLGSAFVWFTSEESAKLAVKEMDGKFF 160
Query: 218 DGRFIAVMMARPEAPSKQVRTTPYRF 295
+GRFI V +++P A R TPY+F
Sbjct: 161 EGRFIYVTISKPGACKTSGRPTPYKF 186
>ref|XP_021688940.1| organelle RRM domain-containing protein 2, mitochondrial-like
isoform X1 [Hevea brasiliensis]
Length = 191
Score = 86.3 bits (212), Expect = 2e-17
Identities = 46/91 (50%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS-------KXXXXXXGLAYIWFAREGDALLAVKEM 202
+FIKGL+ STSEG L K FS FG++S K G A++WF E A LAVKEM
Sbjct: 101 VFIKGLALSTSEGSLKKAFSQFGEVSRTKIVTDKKTKQSLGSAFVWFTSEESAKLAVKEM 160
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
DGKF +GRFI V +++P A R TPY+F
Sbjct: 161 DGKFFEGRFIYVTISKPGACKTSGRPTPYKF 191
>ref|XP_019267010.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X2 [Nicotiana attenuata]
gb|OIT34671.1| glycine-rich rna-binding protein 8 [Nicotiana attenuata]
Length = 171
Score = 85.1 bits (209), Expect = 3e-17
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS-------KXXXXXXGLAYIWFAREGDALLAVKEM 202
IF+KGL+ ST+EG L VFS FGD+S K G AYIWF + A AV+EM
Sbjct: 81 IFLKGLAKSTAEGRLKVVFSQFGDVSRVKIVTDKISKQPLGFAYIWFLDKESAQCAVQEM 140
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
+GKF+DGRFI V MA+P + V+T PY+F
Sbjct: 141 NGKFLDGRFIQVQMAKPGSCKPNVKTAPYKF 171
>ref|XP_016466408.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X2 [Nicotiana tabacum]
Length = 167
Score = 84.7 bits (208), Expect = 4e-17
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS-------KXXXXXXGLAYIWFAREGDALLAVKEM 202
IF+KGL+ ST+EG L VFS FGD+S K G AYIWF + A AV+EM
Sbjct: 77 IFLKGLAKSTAEGRLKVVFSQFGDVSRVKIITDKISKQPLGFAYIWFPDKESAQSAVQEM 136
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
+GKF+DGRFI V MA+P + V+T PY+F
Sbjct: 137 NGKFLDGRFIQVQMAKPGSCKPNVKTAPYKF 167
>ref|XP_009799682.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform X1
[Nicotiana sylvestris]
ref|XP_016463584.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform X1
[Nicotiana tabacum]
Length = 169
Score = 84.3 bits (207), Expect = 5e-17
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS-------KXXXXXXGLAYIWFAREGDALLAVKEM 202
IF+KGL+ ST+EG L VFS FGD+S K G AYIWF+ + A AV+EM
Sbjct: 79 IFLKGLAKSTAEGRLKVVFSQFGDVSRVKIITDKISKQPLGFAYIWFSDKESAQSAVQEM 138
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
+GKF+DGRF+ V +A+PE+ VRT Y+F
Sbjct: 139 NGKFLDGRFVQVQIAKPESCKPNVRTATYKF 169
>ref|XP_020227066.1| glycine-rich RNA-binding protein 4, mitochondrial isoform X2
[Cajanus cajan]
Length = 161
Score = 84.0 bits (206), Expect = 6e-17
Identities = 46/91 (50%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS-------KXXXXXXGLAYIWFAREGDALLAVKEM 202
IF+KGL STSEG L+KVFS FG+++ K G A+I FA+E A LAV+EM
Sbjct: 71 IFVKGLPLSTSEGRLMKVFSEFGEVTLVQLPIDKESSQSLGFAFISFAKEESAQLAVQEM 130
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
+GKF DGRFI V +A+P + RTT Y+F
Sbjct: 131 NGKFFDGRFIYVTIAKPRSSKSSKRTTAYKF 161
>ref|XP_009617118.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B isoform X2 [Nicotiana tomentosiformis]
Length = 167
Score = 83.2 bits (204), Expect = 1e-16
Identities = 45/91 (49%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS-------KXXXXXXGLAYIWFAREGDALLAVKEM 202
IF+KGL+ ST+EG L VFS FGD+S K G AYIWF + A AV+EM
Sbjct: 77 IFLKGLAKSTAEGRLKVVFSQFGDVSRVKIITDKISKQPLGFAYIWFPDKESAQSAVQEM 136
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
+GKF+DGRFI V +A+P + V+T PY+F
Sbjct: 137 NGKFLDGRFIQVQIAKPGSCKPNVKTAPYKF 167
>ref|XP_023881738.1| organelle RRM domain-containing protein 6, chloroplastic-like
isoform X2 [Quercus suber]
gb|POE73919.1| glycine-rich rna-binding protein 4, mitochondrial [Quercus suber]
Length = 163
Score = 82.8 bits (203), Expect = 2e-16
Identities = 48/86 (55%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDISKXXXXXX--GLAYIWFAREGDALLAVKEMDGKFV 217
IFIKGL S SEG L + FS FG++S+ G AYIWF E A LAVKEM+GKF
Sbjct: 80 IFIKGLPQSMSEGRLQRTFSQFGEVSQDTKSRQPLGFAYIWFTTEDSAELAVKEMNGKFF 139
Query: 218 DGRFIAVMMARPEAPSKQVRTTPYRF 295
DGRF+ V +A+P APSK R PY+F
Sbjct: 140 DGRFVYVTIAKP-APSKS-RNRPYKF 163
>ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X1 [Solanum tuberosum]
Length = 168
Score = 82.8 bits (203), Expect = 2e-16
Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 7/91 (7%)
Frame = +2
Query: 44 IFIKGLSCSTSEGCLVKVFSCFGDIS-------KXXXXXXGLAYIWFAREGDALLAVKEM 202
IF+KGL+ ST EG L VFS FGD+S K G AYIWF A AV+EM
Sbjct: 78 IFLKGLAKSTPEGRLKVVFSQFGDVSRVKIITDKKSKESLGFAYIWFPDNESAQAAVQEM 137
Query: 203 DGKFVDGRFIAVMMARPEAPSKQVRTTPYRF 295
+GKF+DGRFI V MA+P + ++T PY+F
Sbjct: 138 NGKFLDGRFIQVQMAKPGSCKLNIKTMPYKF 168