BLASTX nr result
ID: Ophiopogon27_contig00003265
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00003265
(615 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020263607.1| DNA-directed RNA polymerase II subunit RPB2 ... 134 1e-32
gb|ONK73633.1| uncharacterized protein A4U43_C04F33650 [Asparagu... 134 1e-32
gb|AAX48227.1| RPB2I, partial [Rhododendron moupinense] 120 4e-32
gb|ADV72211.1| RNA polymerase II second largest subunit, partial... 120 9e-32
gb|AAX48431.1| RPB2I, partial [Rhododendron virgatum] 119 1e-31
gb|AAX48419.1| RPB2I, partial [Rhododendron afghanicum] 119 1e-31
gb|AAX48293.1| RPB2I, partial [Rhododendron sargentianum] >gi|61... 119 1e-31
gb|AAX22111.1| RPB2, partial [Rhododendron micranthum] >gi|61653... 119 1e-31
gb|ADV72191.1| RNA polymerase II second largest subunit, partial... 119 1e-31
gb|ADV72397.1| RNA polymerase II second largest subunit, partial... 119 1e-31
gb|ADV72380.1| RNA polymerase II second largest subunit, partial... 119 1e-31
gb|AAY85215.1| RNA polymerase II second largest subunit, partial... 123 1e-31
gb|ADV72212.1| RNA polymerase II second largest subunit, partial... 119 2e-31
gb|AEJ86770.1| RNA polymerase II second largest subunit, partial... 120 2e-31
gb|AAY85219.1| RNA polymerase II second largest subunit, partial... 123 2e-31
ref|XP_015690688.1| PREDICTED: DNA-directed RNA polymerase II su... 130 2e-31
ref|XP_006650345.2| PREDICTED: DNA-directed RNA polymerase II su... 130 2e-31
gb|AAX48389.1| RPB2I, partial [Rhododendron vaccinioides] 119 2e-31
gb|AAB94059.1| RPB140, partial [Hordeum vulgare] 129 3e-31
gb|AAW22926.1| RNA polymerase II second largest subunit, partial... 129 3e-31
>ref|XP_020263607.1| DNA-directed RNA polymerase II subunit RPB2 [Asparagus officinalis]
Length = 1211
Score = 134 bits (337), Expect = 1e-32
Identities = 67/75 (89%), Positives = 69/75 (92%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ +IDVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQRLLIKKKHIRALQQREAPEE
Sbjct: 591 RRQIDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEE 650
Query: 121 AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 651 GWHDLVAKGFIEYID 665
>gb|ONK73633.1| uncharacterized protein A4U43_C04F33650 [Asparagus officinalis]
Length = 1228
Score = 134 bits (337), Expect = 1e-32
Identities = 67/75 (89%), Positives = 69/75 (92%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ +IDVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQRLLIKKKHIRALQQREAPEE
Sbjct: 608 RRQIDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKHIRALQQREAPEE 667
Query: 121 AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 668 GWHDLVAKGFIEYID 682
>gb|AAX48227.1| RPB2I, partial [Rhododendron moupinense]
Length = 91
Score = 120 bits (302), Expect = 4e-32
Identities = 62/76 (81%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQ+LLIKKK I ALQQRE+PEE
Sbjct: 2 RRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQKLLIKKKDILALQQRESPEE 61
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 62 VGWHDLVAKGFIEYVD 77
>gb|ADV72211.1| RNA polymerase II second largest subunit, partial [Rhododendron
gaultheriifolium]
Length = 91
Score = 120 bits (300), Expect = 9e-32
Identities = 61/76 (80%), Positives = 68/76 (89%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
++++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQ+LLIKKK I ALQQRE+PEE
Sbjct: 2 RKQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQKLLIKKKDILALQQRESPEE 61
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKG+IEY D
Sbjct: 62 VGWHDLVAKGYIEYVD 77
>gb|AAX48431.1| RPB2I, partial [Rhododendron virgatum]
Length = 91
Score = 119 bits (299), Expect = 1e-31
Identities = 61/76 (80%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQ+LLIKKK I ALQQRE+PEE
Sbjct: 2 RRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQKLLIKKKDILALQQRESPEE 61
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKG+IEY D
Sbjct: 62 VGWHDLVAKGYIEYVD 77
>gb|AAX48419.1| RPB2I, partial [Rhododendron afghanicum]
Length = 91
Score = 119 bits (299), Expect = 1e-31
Identities = 61/76 (80%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQ+LLIKKK I ALQQRE+PEE
Sbjct: 2 RRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQKLLIKKKDILALQQRESPEE 61
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKG+IEY D
Sbjct: 62 VCWHDLVAKGYIEYVD 77
>gb|AAX48293.1| RPB2I, partial [Rhododendron sargentianum]
gb|AAX48329.1| RPB2I, partial [Rhododendron impeditum]
gb|AAX48335.1| RPB2I, partial [Rhododendron baileyi]
gb|AAX48437.1| RPB2I, partial [Rhododendron lutescens]
gb|AAX48443.1| RPB2I, partial [Rhododendron triflorum]
Length = 91
Score = 119 bits (299), Expect = 1e-31
Identities = 61/76 (80%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQ+LLIKKK I ALQQRE+PEE
Sbjct: 2 RRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQKLLIKKKDILALQQRESPEE 61
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKG+IEY D
Sbjct: 62 VGWHDLVAKGYIEYVD 77
>gb|AAX22111.1| RPB2, partial [Rhododendron micranthum]
gb|AAX48233.1| RPB2I, partial [Rhododendron xanthostephanum]
gb|AAX48239.1| RPB2I, partial [Rhododendron veitchianum]
gb|AAX48245.1| RPB2I, partial [Rhododendron edgeworthii]
gb|AAX48251.1| RPB2I, partial [Rhododendron sulfureum]
gb|AAX48263.1| RPB2I, partial [Rhododendron nuttallii]
gb|AAX48269.1| RPB2I, partial [Rhododendron excellens]
gb|AAX48275.1| RPB2I, partial [Rhododendron ciliatum]
gb|AAX48281.1| RPB2I, partial [Rhododendron lapponicum]
gb|AAX48287.1| RPB2I, partial [Rhododendron orthocladum]
gb|AAX48299.1| RPB2I, partial [Rhododendron kongboense]
gb|AAX48305.1| RPB2I, partial [Rhododendron anthopogon]
gb|AAX48311.1| RPB2I, partial [Rhododendron mucronulatum]
gb|AAX48317.1| RPB2I, partial [Rhododendron ferrugineum]
gb|AAX48323.1| RPB2I, partial [Rhododendron minus]
gb|AAX48347.1| RPB2I, partial [Rhododendron radians]
gb|AAX48371.1| RPB2I, partial [Rhododendron sororium]
gb|AAX48377.1| RPB2I, partial [Rhododendron asperulum]
gb|AAX48395.1| RPB2I, partial [Rhododendron campylogynum]
gb|AAX48401.1| RPB2I, partial [Rhododendron genestierianum]
gb|AAX48449.1| RPB2I, partial [Rhododendron keiskei]
gb|AAX48461.1| RPB2I, partial [Rhododendron mekongense]
gb|ADV72164.1| RNA polymerase II second largest subunit, partial [Rhododendron
alborugosum]
gb|ADV72165.1| RNA polymerase II second largest subunit, partial [Rhododendron
jasminiflorum]
gb|ADV72166.1| RNA polymerase II second largest subunit, partial [Rhododendron
suaveolens]
gb|ADV72167.1| RNA polymerase II second largest subunit, partial [Rhododendron
ruttenii]
gb|ADV72168.1| RNA polymerase II second largest subunit, partial [Rhododendron
salicifolium]
gb|ADV72169.1| RNA polymerase II second largest subunit, partial [Rhododendron
edanoi]
gb|ADV72170.1| RNA polymerase II second largest subunit, partial [Rhododendron
orbiculatum]
gb|ADV72171.1| RNA polymerase II second largest subunit, partial [Rhododendron
stapfianum]
gb|ADV72172.1| RNA polymerase II second largest subunit, partial [Rhododendron
buxifolium]
gb|ADV72173.1| RNA polymerase II second largest subunit, partial [Rhododendron
maxwellii]
gb|ADV72174.1| RNA polymerase II second largest subunit, partial [Rhododendron
yongii]
gb|ADV72175.1| RNA polymerase II second largest subunit, partial [Rhododendron
burttii]
gb|ADV72177.1| RNA polymerase II second largest subunit, partial [Rhododendron
pauciflorum]
gb|ADV72178.1| RNA polymerase II second largest subunit, partial [Rhododendron
album]
gb|ADV72179.1| RNA polymerase II second largest subunit, partial [Rhododendron
aequabile]
gb|ADV72181.1| RNA polymerase II second largest subunit, partial [Rhododendron
citrinum]
gb|ADV72183.1| RNA polymerase II second largest subunit, partial [Rhododendron
lowii]
gb|ADV72184.1| RNA polymerase II second largest subunit, partial [Rhododendron
lagunculicarpum]
gb|ADV72185.1| RNA polymerase II second largest subunit, partial [Rhododendron
vanvuurenii]
gb|ADV72186.1| RNA polymerase II second largest subunit, partial [Rhododendron
alternans]
gb|ADV72187.1| RNA polymerase II second largest subunit, partial [Rhododendron
celebicum]
gb|ADV72188.1| RNA polymerase II second largest subunit, partial [Rhododendron
pudorinum]
gb|ADV72189.1| RNA polymerase II second largest subunit, partial [Rhododendron
renschianum]
gb|ADV72190.1| RNA polymerase II second largest subunit, partial [Rhododendron
correoides]
gb|ADV72192.1| RNA polymerase II second largest subunit, partial [Rhododendron
arenicola]
gb|ADV72193.1| RNA polymerase II second largest subunit, partial [Rhododendron
rhodopus]
gb|ADV72194.1| RNA polymerase II second largest subunit, partial [Rhododendron
multicolor]
gb|ADV72195.1| RNA polymerase II second largest subunit, partial [Rhododendron
zollingeri]
gb|ADV72196.1| RNA polymerase II second largest subunit, partial [Rhododendron
brookeanum]
gb|ADV72197.1| RNA polymerase II second largest subunit, partial [Rhododendron
rarilepidotum]
gb|ADV72198.1| RNA polymerase II second largest subunit, partial [Rhododendron
javanicum]
gb|ADV72199.1| RNA polymerase II second largest subunit, partial [Rhododendron
robinsonii]
gb|ADV72200.1| RNA polymerase II second largest subunit, partial [Rhododendron
williamsii]
gb|ADV72201.1| RNA polymerase II second largest subunit, partial [Rhododendron
pseudobuxifolium]
gb|ADV72202.1| RNA polymerase II second largest subunit, partial [Rhododendron
sarcodes]
gb|ADV72203.1| RNA polymerase II second largest subunit, partial [Rhododendron
bagobonum]
gb|ADV72204.1| RNA polymerase II second largest subunit, partial [Rhododendron
fallacinum]
gb|ADV72205.1| RNA polymerase II second largest subunit, partial [Rhododendron
malayanum]
gb|ADV72207.1| RNA polymerase II second largest subunit, partial [Rhododendron
apoanum]
gb|ADV72208.1| RNA polymerase II second largest subunit, partial [Rhododendron
nanophyton]
gb|ADV72213.1| RNA polymerase II second largest subunit, partial [Rhododendron
vanderbiltianum]
gb|ADV72214.1| RNA polymerase II second largest subunit, partial [Rhododendron
retusum]
gb|ADV72215.1| RNA polymerase II second largest subunit, partial [Rhododendron
adinophyllum]
gb|ADV72216.1| RNA polymerase II second largest subunit, partial [Rhododendron
perakense]
gb|ADV72219.1| RNA polymerase II second largest subunit, partial [Rhododendron
kawakamii]
gb|ADV72220.1| RNA polymerase II second largest subunit, partial [Rhododendron
rushforthii]
Length = 91
Score = 119 bits (299), Expect = 1e-31
Identities = 61/76 (80%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQ+LLIKKK I ALQQRE+PEE
Sbjct: 2 RRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQKLLIKKKDILALQQRESPEE 61
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKG+IEY D
Sbjct: 62 VGWHDLVAKGYIEYVD 77
>gb|ADV72191.1| RNA polymerase II second largest subunit, partial [Rhododendron
madulidii]
Length = 91
Score = 119 bits (299), Expect = 1e-31
Identities = 61/76 (80%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQ+LLIKKK I ALQQRE+PEE
Sbjct: 2 RRQVDVNTEVGVIRDVRLKELRLYTDYGRCSRPLFIVEKQKLLIKKKDILALQQRESPEE 61
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKG+IEY D
Sbjct: 62 VGWHDLVAKGYIEYVD 77
>gb|ADV72397.1| RNA polymerase II second largest subunit, partial [Rhododendron
sumatranum]
gb|ADV72398.1| RNA polymerase II second largest subunit, partial [Rhododendron
album]
gb|ADV72399.1| RNA polymerase II second largest subunit, partial [Rhododendron
citrinum]
gb|ADV72400.1| RNA polymerase II second largest subunit, partial [Rhododendron
aequabile]
Length = 93
Score = 119 bits (299), Expect = 1e-31
Identities = 59/76 (77%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGV+RD RLKELR+ TDYGRCS PLFIVEKQRLLIK+K I+ALQQRE PE+
Sbjct: 4 RRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPED 63
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 64 GGWHDLVAKGFIEYID 79
>gb|ADV72380.1| RNA polymerase II second largest subunit, partial [Rhododendron
rarum]
gb|ADV72381.1| RNA polymerase II second largest subunit, partial [Rhododendron
zoelleri]
gb|ADV72382.1| RNA polymerase II second largest subunit, partial [Rhododendron
inundatum]
gb|ADV72383.1| RNA polymerase II second largest subunit, partial [Rhododendron
solitarium]
gb|ADV72384.1| RNA polymerase II second largest subunit, partial [Rhododendron
gracilentum]
gb|ADV72385.1| RNA polymerase II second largest subunit, partial [Rhododendron
dielsianum]
gb|ADV72386.1| RNA polymerase II second largest subunit, partial [Rhododendron
herzogii]
gb|ADV72387.1| RNA polymerase II second largest subunit, partial [Rhododendron
luraluense]
gb|ADV72388.1| RNA polymerase II second largest subunit, partial [Rhododendron
inconspicuum]
gb|ADV72389.1| RNA polymerase II second largest subunit, partial [Rhododendron
yelliottii]
gb|ADV72390.1| RNA polymerase II second largest subunit, partial [Rhododendron
konori]
gb|ADV72391.1| RNA polymerase II second largest subunit, partial [Rhododendron
superbum]
gb|ADV72392.1| RNA polymerase II second largest subunit, partial [Rhododendron
carringtoniae]
gb|ADV72393.1| RNA polymerase II second largest subunit, partial [Rhododendron
lochiae]
gb|ADV72394.1| RNA polymerase II second largest subunit, partial [Rhododendron
leucogigas]
gb|ADV72395.1| RNA polymerase II second largest subunit, partial [Rhododendron
buxifolium]
gb|ADV72396.1| RNA polymerase II second largest subunit, partial [Rhododendron
pauciflorum]
gb|ADV72401.1| RNA polymerase II second largest subunit, partial [Rhododendron
edanoi]
gb|ADV72402.1| RNA polymerase II second largest subunit, partial [Rhododendron
maxwellii]
gb|ADV72403.1| RNA polymerase II second largest subunit, partial [Rhododendron
rugosum]
gb|ADV72404.1| RNA polymerase II second largest subunit, partial [Rhododendron
alborugosum]
gb|ADV72405.1| RNA polymerase II second largest subunit, partial [Rhododendron
praetervisum]
gb|ADV72406.1| RNA polymerase II second largest subunit, partial [Rhododendron
ruttenii]
gb|ADV72407.1| RNA polymerase II second largest subunit, partial [Rhododendron
radians]
gb|ADV72408.1| RNA polymerase II second largest subunit, partial [Rhododendron
jasminiflorum]
gb|ADV72409.1| RNA polymerase II second largest subunit, partial [Rhododendron
suaveolens]
gb|ADV72411.1| RNA polymerase II second largest subunit, partial [Rhododendron
zollingeri]
gb|ADV72412.1| RNA polymerase II second largest subunit, partial [Rhododendron
pudorinum]
gb|ADV72413.1| RNA polymerase II second largest subunit, partial [Rhododendron
alternans]
gb|ADV72414.1| RNA polymerase II second largest subunit, partial [Rhododendron
renschianum]
gb|ADV72415.1| RNA polymerase II second largest subunit, partial [Rhododendron
rhodopus]
gb|ADV72416.1| RNA polymerase II second largest subunit, partial [Rhododendron
javanicum]
gb|ADV72417.1| RNA polymerase II second largest subunit, partial [Rhododendron
rarilepidotum]
gb|ADV72418.1| RNA polymerase II second largest subunit, partial [Rhododendron
brookeanum]
gb|ADV72419.1| RNA polymerase II second largest subunit, partial [Rhododendron
crassifolium]
gb|ADV72420.1| RNA polymerase II second largest subunit, partial [Rhododendron
apoanum]
gb|ADV72421.1| RNA polymerase II second largest subunit, partial [Rhododendron
fallacinum]
gb|ADV72422.1| RNA polymerase II second largest subunit, partial [Rhododendron
malayanum]
gb|ADV72423.1| RNA polymerase II second largest subunit, partial [Rhododendron
himantodes]
gb|ADV72424.1| RNA polymerase II second largest subunit, partial [Rhododendron
robinsonii]
gb|ADV72425.1| RNA polymerase II second largest subunit, partial [Rhododendron
kawakamii]
gb|ADV72426.1| RNA polymerase II second largest subunit, partial [Rhododendron
rushforthii]
gb|ADV72427.1| RNA polymerase II second largest subunit, partial [Rhododendron
asperulum]
gb|ADV72428.1| RNA polymerase II second largest subunit, partial [Rhododendron
emarginatum]
gb|ADV72429.1| RNA polymerase II second largest subunit, partial [Rhododendron
perakense]
gb|ADV72430.1| RNA polymerase II second largest subunit, partial [Rhododendron
meliphagidum]
gb|ADV72431.1| RNA polymerase II second largest subunit, partial [Rhododendron
quadrasianum]
gb|ADV72432.1| RNA polymerase II second largest subunit, partial [Rhododendron
gaultheriifolium]
gb|ADV72433.1| RNA polymerase II second largest subunit, partial [Rhododendron
ericoides]
gb|ADV72434.1| RNA polymerase II second largest subunit, partial [Rhododendron
retusum]
gb|ADV72435.1| RNA polymerase II second largest subunit, partial [Rhododendron
adinophyllum]
gb|ADV72436.1| RNA polymerase II second largest subunit, partial [Rhododendron
vaccinioides]
gb|ADV72437.1| RNA polymerase II second largest subunit, partial [Rhododendron
vanderbiltianum]
gb|ADV72438.1| RNA polymerase II second largest subunit, partial [Rhododendron
sulfureum]
gb|ADV72439.1| RNA polymerase II second largest subunit, partial [Rhododendron
excellens]
gb|ADV72440.1| RNA polymerase II second largest subunit, partial [Rhododendron
pendulum]
gb|ADV72441.1| RNA polymerase II second largest subunit, partial [Rhododendron
mucronulatum]
gb|ADV72442.1| RNA polymerase II second largest subunit, partial [Rhododendron
veitchianum]
gb|ADV72443.1| RNA polymerase II second largest subunit, partial [Rhododendron
edgeworthii]
gb|ADV72444.1| RNA polymerase II second largest subunit, partial [Rhododendron
xanthostephanum]
gb|ADV72446.1| RNA polymerase II second largest subunit, partial [Rhododendron
tomentosum]
gb|ADV72447.1| RNA polymerase II second largest subunit, partial [Rhododendron
minus]
gb|ADV72448.1| RNA polymerase II second largest subunit, partial [Rhododendron
macabeanum]
gb|ADV72449.1| RNA polymerase II second largest subunit, partial [Rhododendron
pseudochrysanthum]
gb|ADV72450.1| RNA polymerase II second largest subunit, partial [Rhododendron
triflorum]
gb|ADV72451.1| RNA polymerase II second largest subunit, partial [Rhododendron
afghanicum]
gb|ADV72452.1| RNA polymerase II second largest subunit, partial [Rhododendron
spinuliferum]
gb|ADV72453.1| RNA polymerase II second largest subunit, partial [Rhododendron
virgatum]
gb|ADV72454.1| RNA polymerase II second largest subunit, partial [Rhododendron
santapaui]
gb|ADV72455.1| RNA polymerase II second largest subunit, partial [Rhododendron
ferrugineum]
gb|ADV72456.1| RNA polymerase II second largest subunit, partial [Rhododendron
micranthum]
gb|ADV72457.1| RNA polymerase II second largest subunit, partial [Rhododendron
dauricum]
gb|ADV72458.1| RNA polymerase II second largest subunit, partial [Rhododendron
stamineum]
gb|ADV72459.1| RNA polymerase II second largest subunit, partial [Rhododendron
moulmainense]
gb|ADV72460.1| RNA polymerase II second largest subunit, partial [Rhododendron
camtschaticum]
Length = 93
Score = 119 bits (299), Expect = 1e-31
Identities = 59/76 (77%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGV+RD RLKELR+ TDYGRCS PLFIVEKQRLLIK+K I+ALQQRE PE+
Sbjct: 4 RRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPED 63
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 64 GGWHDLVAKGFIEYID 79
>gb|AAY85215.1| RNA polymerase II second largest subunit, partial [Hibbertia
cuneiformis]
Length = 219
Score = 123 bits (309), Expect = 1e-31
Identities = 63/76 (82%), Positives = 68/76 (89%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQRLLIKKK IRALQQRE+PE+
Sbjct: 79 RRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESPED 138
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 139 GGWHDLVAKGFIEYVD 154
>gb|ADV72212.1| RNA polymerase II second largest subunit, partial [Rhododendron
meliphagidum]
Length = 91
Score = 119 bits (298), Expect = 2e-31
Identities = 60/76 (78%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVG+IRD RLKELRL TDYGRCS PLFIVEKQ+LLIKKK I ALQQRE+PEE
Sbjct: 2 RRQVDVNTEVGIIRDIRLKELRLYTDYGRCSRPLFIVEKQKLLIKKKDILALQQRESPEE 61
Query: 121 -AWHDLVAKGFIEYND 77
WHDLVAKG+IEY D
Sbjct: 62 VGWHDLVAKGYIEYVD 77
>gb|AEJ86770.1| RNA polymerase II second largest subunit, partial [Cissus repens]
Length = 141
Score = 120 bits (302), Expect = 2e-31
Identities = 62/76 (81%), Positives = 67/76 (88%), Gaps = 1/76 (1%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQRLLIKKK IRALQ RE+PEE
Sbjct: 11 RRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQLRESPEE 70
Query: 121 -AWHDLVAKGFIEYND 77
WHDLV+KGFIEY D
Sbjct: 71 CGWHDLVSKGFIEYVD 86
>gb|AAY85219.1| RNA polymerase II second largest subunit, partial [Lindera glauca]
Length = 218
Score = 123 bits (308), Expect = 2e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEK+RLLIKKK I+ALQQRE EE
Sbjct: 79 RRRVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKKRLLIKKKDIQALQQRETQEE 138
Query: 121 AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 139 GWHDLVAKGFIEYVD 153
>ref|XP_015690688.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
[Oryza brachyantha]
ref|XP_015690689.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X3
[Oryza brachyantha]
Length = 1219
Score = 130 bits (327), Expect = 2e-31
Identities = 64/75 (85%), Positives = 67/75 (89%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ +IDVNTEVGV+RD RLKELRL TDYGRCS PLFIVE QRLLIKKKHIRALQQRE PEE
Sbjct: 625 RRQIDVNTEVGVVRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPEE 684
Query: 121 AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 685 GWHDLVAKGFIEYID 699
>ref|XP_006650345.2| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Oryza brachyantha]
Length = 1254
Score = 130 bits (327), Expect = 2e-31
Identities = 64/75 (85%), Positives = 67/75 (89%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ +IDVNTEVGV+RD RLKELRL TDYGRCS PLFIVE QRLLIKKKHIRALQQRE PEE
Sbjct: 660 RRQIDVNTEVGVVRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPEE 719
Query: 121 AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 720 GWHDLVAKGFIEYID 734
>gb|AAX48389.1| RPB2I, partial [Rhododendron vaccinioides]
Length = 91
Score = 119 bits (297), Expect = 2e-31
Identities = 61/74 (82%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Frame = -3
Query: 295 KIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE-A 119
++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQ+LLIKKK I ALQQRE+PEE
Sbjct: 4 QVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQKLLIKKKDILALQQRESPEEVG 63
Query: 118 WHDLVAKGFIEYND 77
WHDLVAKG+IEY D
Sbjct: 64 WHDLVAKGYIEYVD 77
>gb|AAB94059.1| RPB140, partial [Hordeum vulgare]
Length = 555
Score = 129 bits (324), Expect = 3e-31
Identities = 63/75 (84%), Positives = 67/75 (89%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ +IDVNTEVGV+RD RLKELRL TDYGRCS PLFIVE QRLLIKKKHIRALQQRE P+E
Sbjct: 86 RRQIDVNTEVGVVRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPDE 145
Query: 121 AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 146 GWHDLVAKGFIEYID 160
>gb|AAW22926.1| RNA polymerase II second largest subunit, partial [Illicium
anisatum]
Length = 539
Score = 129 bits (323), Expect = 3e-31
Identities = 64/75 (85%), Positives = 67/75 (89%)
Frame = -3
Query: 301 KEKIDVNTEVGVIRDNRLKELRL*TDYGRCSCPLFIVEKQRLLIKKKHIRALQQREAPEE 122
+ ++DVNTEVGVIRD RLKELRL TDYGRCS PLFIVEKQRLLIKKK IRALQQRE PEE
Sbjct: 71 RRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEE 130
Query: 121 AWHDLVAKGFIEYND 77
WHDLVAKGFIEY D
Sbjct: 131 GWHDLVAKGFIEYVD 145